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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 2218 |
| Cds size | 1572 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7837.15865.1 >prot_H-paniculata_contig7837.15865.1 ID=prot_H-paniculata_contig7837.15865.1|Name=mRNA_H-paniculata_contig7837.15865.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=524bp
MSELFLQPKASGEAQESFAVPAVATAAAVVVVAPGDRPDQSLDSPDGAPP
TMLPLGARKTSWADFGGDYRSSPRHEVGEVAIAKSGSDLYHNNARTTSSA
GKMGSVVSATANGDGIDTAAAAAAVAAGEGGAETVNATKTPTGTTMFTAV
AKVCEGSACIRWAEDLDTSDVPRTLEVEKVGETDMTKRIGIVTGSGDCCN
NSQEEKEPVLGGGRGASLPRQQQQPPTENLELTSRGHNPPEQATSKHADV
TDVELGRQLSSLSGTVTAAAVASVATVCSSATASPEGQIGFVGFQPPSPT
QFRSMKSKSNVTDTSGACDSEYSCKSLIDVGGGSSSCEIGPPGMIFSSVG
SAGSALSSATSTASASRGGGIGGIGGTGGIGGIGCFDYRQLNPTSTASTP
GSAATSVAVAETLVTAQVLATESCYSIGGEEEWWGRDGDGEGIFRGSNGG
GGDCGCGDNDSNSPGDDDRSAGHKASPTVPEPQDVHGDAGGGPSPGTAGV
GGGNSSAAKGGGVTGGPSPAPDGG back to topmRNA from alignment at H-paniculata_contig7837:985..6344+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig7837.15865.1 ID=mRNA_H-paniculata_contig7837.15865.1|Name=mRNA_H-paniculata_contig7837.15865.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5360bp|location=Sequence derived from alignment at H-paniculata_contig7837:985..6344+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGTCTGGGCGCAGCGGCAGCACGTGCATGAAGTGAAGCACCTTCCTCTAG
GACCCCAGCATATTTCTTTAGCTTTTATGGGAAAGAGGGAGCAGGGGCCC
ACATACGGAGATTTTTTTTTGCTGACGGAGCGACGGCGTAAATCCGTCCT
AGCTGTTGCAAGTGGTGACACGGTTGGTCATCCTCCATTGTAGCAGCAGC
AGGAGCGGCAGGAGCTGCAGCAGCGGCGGCTACGAAACGGTGCTGCGGGA
CCATAACGCTAGTAAATCCAGTGTTCCCTGTATTTGGTTTGAAATGCTAT
CGTCATAATAGCATACCGTGGTGTGTGCCTCTTTCGAGACATTTGCCGCA
AAAAAAGCCGCGGTGGCGTGGCAGACTTTACGGTGTGCGGTGACAGCAGC
CTGCCACTCTTGAAAATCCACCATATATTGAGAGGAAGTCTATCTCACCC
CTCCGTCGGGATAGGGGCCGCTCTACGGGCGTGGTGCGCCAGCGGTCGGT
TAGATTTGCTGGGCAGGCGACGAAAAGGGGGCAGCACGACGCACTCCATG
CGCGGCGTCAGTCGTCATCTAGCTGTTGTTGGTCACCGGGGGGTTGGCGT
CTGCCGTCGATAGTATAGTATAGCTGATTAACGTTGTCAAATAACCATGT
CAGAGTTATTTCTGCAACCAAAGGCATCGGGCGAGGCACAAGAGAGTTTT
GCTGTTCCTGCAGTAGCAACGGCGGCGGCGGTTGTTGTGGTGGCGCCAGG
CGACCGTCCCGACCAGTCATTAGATTCGCCCGATGGGGCACCGCCAACTA
TGCTGCCGCTGGGAGCTCGCAAGACTTCGTGGGCAGATTTTGGGGGAGAT
TATCGATCATCGCCGAGGCACGAAGTGGGGGAGGTGAGTAATCCTCTTTC
GCGTCCGGGAGCTTGGGAGAAATTCGTTCAAATCTACCTAAGAAAGTAAA
ACAAAAAGCCTTTCGGAGGCACCAACGTCGAGAGGGTTCGGGGTGATCTT
TTAGCGAGGCCTTGTTAATTCTTGGACGTTTTGGTCCTCGAACCCTGTAT
AAAATGTACCTATGAGCGAAAAGGTGTATCGTGCACAGAGGATTTCTGGT
ATTTCTCTGTAGCTCGATGCACGATGCTGAGTTGGTGTGCCCTGTCTGTT
TCAGTACTGCGGGACTTGATAATAGTGGAGAAACGGACAGTTAGGCGAGA
ATAGACACACCGCGAGAACACTGGGATAACGCTTTGTGTTTTTTTTTTCC
GAGAAAGGTCTGCCCACATGACAAAAATGCTTTTGGACATGGTGTGGTAT
TCTCGAACCGCAGCAGTGATTTACCATATTATTGGATGGAGGTAGTTCTG
GAGTATTGACTCGCTCTCGAAAAATTGCCTCGGAAGAAATTCCTCGAGGC
TCAGCTTTTTTGGTCTCTCTATATATATATTTTCTACAAGAACGAATGTA
TTCAACTGCTAGTCCTGTTTTTTTTTGTTTTTCTTTACATGTATAAAATA
CTCATGCTTCCATCGCGGCCGCGTGATGAGGTTTCGCTCACCGGACAAGT
ACGAATACTTGGGAAAAGCATTGTCACGACTTTTTTGCCTGAAGCTTTGG
CATAATTACGTTTATTCTATATGCGCCATCCCGCACATTGTGGAACTCAG
GAGTCGGGCTGAGGTAGGGGGGGGGGGGTACTTGGAGCCGACTTGTATCA
GTTCTCAGTCGATTTGCAAAGCAGGTAGACAGATAACCTTTACGACTTTT
TTGAATCGTGCGTTGTGCACCGTTGGGGAGGAGTGAATAGGTGCTTCTGA
AGAGATTTTGATTCGAGGTAGTTTCTAGCTGATCTGTGAATCGACGCTCG
TCCAACCCTCCCCTCCCTCCCTCTACCTTAACCTGCCTCTCAGTCAAAGG
CATTTGTAACTTCTTCGTATATTCTCTCTCAAGTATTCGTATTTGTACGG
TTGGAGTGTAATGTTTTGAACTCACTCGGAGTGGAGAGTTGCTTGTAAGC
GGGCCTGTACTGTATGCATCACCTTGAGTGCTTTCGTGGAAAATATTGAG
GAAGTTCATGCACTACTGCAACTGGGTCACACGATCTTTTGTCACCTCAC
CTACTTGTACGCCGGGTTGTAGACCAATGGTGGCATAATACAACCCCCTG
CTTGGCATGATGACGGATCCACGCGCGATGCAGTGTTCTATCCTACCGGT
ATCAATTAAATAGTACAAACTACTGAATTATTTGTTGGCGGGTATCATCC
GTGTGCCTTTATATGTGTACCTGTTGCTGGATGATGACCGTTTTGTCCAG
ATGTGTATACGTATCCAGGTATTGAAGCAGACAGGCCAGTGAACTGCTGT
AGTTCTGCTTCGCCGAAATCTGTCACGCTCGACTTTCATAGCGTCGGTTT
TGTTTTTTCCCTCCCCAAAAAACGCAGAAATGTTGTTTTTGAGAGTTGAT
GAAGCAGTGGTTCCAGAGAGGACACGAAGCCTTTTGGCTTCACCATCAGT
GCAAATGTCTCTTTTTGTACGTGCGGGTGGTGGTATATTTCCTATTGGCT
GCCCGTGCGCCAGCGATGTGGGATGGGGCGGAGAGTTAAGTTTAGTTCCG
CAGTCACGTTGACCGCTCTAGCAAAAAGTATACCTATACGACGCTTATTC
AACGTCGGTAACCATAGGCATTTTTGTGTGTGATAGATCTCAGCGCTGAA
AGAAGTTCACTGCACGGGTCAAACAATTACGTGTGTGTGTGTTTTCCGCT
TTTTCACCGAATGTTCGTTAATTCACTCTAAATGTTGAGGATCGGTAGAT
ATTGGCATGAGAAATAATAGAACAGGTCTTTCATAGGAAAGATGTTCCAA
TTTTGTTTTATCGGAACAGTACGGGAGATTTTTTTTTTTTTTTTTTTTGG
GGGGGGGGGTGCCATTCACCGCATTTTGGTCGTAAATACGGTTATTTGCG
CTTGGTGCCATGAATTTCTTGAAAAGTTGACATCTGAAGCCACCATTTCC
ACCAGAGATTTGGGGATATGTTCAATTAAAAACAAGAAACCAAGAGCCGA
AAGCGGGGAGGAGATCGGTAGGATCCCCGACGACCGGTATAGCCCGAATT
ATATTCAAATTTCATCGTGGAAATCCAATCGTAATATCTATCGAGCCCCA
TATTTTGGGATCAAATGTCGACTTTGATAACTCGCGATGCCCGAAAAACC
AGAAGAAAACAGAAAAATGGTCCCGAGAATCGTTTGACCCGTGGGCTGTT
TATCTCTTCGACAAGGGCGAGCGCATTATGGTGGACCAACAAGCGATTCC
CCAACAACAACGATGGGTGCAGACAATTTTAAAGCTGAAAGGTGCTCGTT
TCTTTGAGAGTTTAAACAAAGTATGGCGCAATGCATTGGGTGCGCGCGAG
CGCCACGTCAAATGAAGCTTAAGAATTATATTTCGAAGATATGGGTTTTT
TATTTTAATAGTCGAAAATCGATCATATCATATTCTCTTCTGCCGAAAAT
ACTTGTATTACTCTTCTTGATTCCTGCTTCATTTGCCCTGATTGATTTGT
TCATCCGCCAGAGGTACAACTAGCATTGTCGGAGAGCTGATATGCTCACC
TTTAGGCCGATACTGATTAATCTTTTGTCGACTTCGTCCATTTTGTGTCA
CACAACGTTTTACAAAGTATCCCAACAAAAACGTGGCATTTCTTTTTTTT
TTCCCCCGGAGATTTACCGCCTAGTAAGTGCGGTTCCAGCGTATTAGTGT
TTCTTGGAGAAGGGTGCATAGCCAACCACCCAAAAATTGACCTCAAATAG
GAGGATTTGGCTCTCCACTTGGGATGCATCATTAGTCCGTGAGCAGATGG
ATATATTCTTGCTTCCCTCTGATTTTGACACTACCGTATATTTCTGTCCC
ATTTTTCGTAATCCCATCCGCGGCGTATCACGTATCATAGCCCATTTCCT
CTTGCGCTTTCGATGCTGCATCGGCCACAGGTGGCGATTGCGAAATCTGG
CAGCGATTTATATCATAACAACGCAAGGACCACGAGTTCTGCCGGAAAGA
TGGGCTCGGTGGTCAGCGCAACCGCAAACGGGGATGGAATCGACAGCCGA
CCCGCCGACCGAAATCGAGCAGGCAAGCTGGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGTAGCAGCAGGAGAAGGAGGAGCAGAGACGGTAAATGCGA
CGAAGACGCCAACAGGAACGACAATGTTTACGGCGGTTGCGAAAGTTTGC
GAAGGATCGGCATGTATCCGCTGGGCGGAAGACCTGGATACATCAGACGT
GCCGCGTACACTGGAAGTGGAGAAGGTTGGGGAGACAGACATGACCAAAC
GAATAGGAATCGTCACCGGTAGCGGTGATTGTTGTAACAACAGTCAGGAA
GAGAAAGAACCCGTGTTGGGCGGTGGGCGGGGGGCGTCCCTACCGCGCCA
ACAGCAACAACCGCCAACAGAAAACCTCGAACTGACAAGCCGGGGGCACA
ATCCTCCAGAACAGGCCACTTCCAAACATGCTGATGTGACTGATGTCGAG
CTTGGGAGGCAGCTGTCCTCCTTGTCTGGTACCGTTACAGCTGCGGCTGT
AGCCAGCGTCGCAACTGTGTGCTCCTCAGCTACGGCATCACCCGAGGGTC
AAATTGGATTCGTTGGCTTCCAGCCACCATCACCTACACAATTCCGGTCG
ATGAAGTCCAAGTCGAACGTAACGGACACTTCTGGGGCCTGTGACAGCGA
GTACAGCTGCAAGAGCTTGATCGATGTTGGGGGCGGCAGTAGCAGCTGCG
AGATAGGGCCGCCGGGCATGATCTTTTCGTCCGTCGGATCCGCAGGGAGC
GCATTATCCTCTGCCACCTCGACCGCATCAGCTTCTCGAGGCGGCGGCAT
TGGCGGCATTGGCGGTACTGGCGGCATTGGCGGTATTGGCTGCTTCGACT
ATCGTCAACTTAACCCGACCTCTACAGCATCGACGCCGGGTTCCGCCGCC
ACGTCTGTCGCCGTTGCCGAAACGCTGGTCACCGCGCAGGTATTGGCCAC
CGAGAGCTGTTACTCCATTGGTGGGGAGGAGGAATGGTGGGGCCGAGACG
GAGACGGCGAAGGCATCTTTAGGGGCAGCAATGGCGGCGGCGGCGACTGC
GGCTGCGGCGATAACGACAGCAACTCGCCGGGCGATGACGATAGAAGCGC
CGGTCACAAGGCTAGCCCAACAGTCCCCGAGCCGCAGGACGTGCATGGAG
ACGCCGGCGGCGGTCCTAGCCCCGGCACCGCGGGCGTCGGCGGGGGAAAT
AGCTCCGCGGCGAAAGGAGGTGGAGTTACTGGAGGGCCGTCTCCGGCGCC
AGACGGAGGA back to topCoding sequence (CDS) from alignment at H-paniculata_contig7837:985..6344+ >mRNA_H-paniculata_contig7837.15865.1 ID=mRNA_H-paniculata_contig7837.15865.1|Name=mRNA_H-paniculata_contig7837.15865.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3144bp|location=Sequence derived from alignment at H-paniculata_contig7837:985..6344+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCAGAGTTATTTCTGCAACCAAAGGCATCGGGCGAGGCACAAGAGAG
TTTTGCTGTTCCTGCAGTAGCAACGGCGGCGGCGGTTGTTGTGGTGGCGC
CAGGCGACCGTCCCGACCAGTCATTAGATTCGCCCGATGGGGCACCGCCA
ACTATGCTGCCGCTGGGAGCTCGCAAGACTTCGTGGGCAGATTTTGGGGG
AGATTATCGATCATCGCCGAGGCACGAAGTGGGGGAGATGTCAGAGTTAT
TTCTGCAACCAAAGGCATCGGGCGAGGCACAAGAGAGTTTTGCTGTTCCT
GCAGTAGCAACGGCGGCGGCGGTTGTTGTGGTGGCGCCAGGCGACCGTCC
CGACCAGTCATTAGATTCGCCCGATGGGGCACCGCCAACTATGCTGCCGC
TGGGAGCTCGCAAGACTTCGTGGGCAGATTTTGGGGGAGATTATCGATCA
TCGCCGAGGCACGAAGTGGGGGAGGTGGCGATTGCGAAATCTGGCAGCGA
TTTATATCATAACAACGCAAGGACCACGAGTTCTGCCGGAAAGATGGGCT
CGGTGGTCAGCGCAACCGCAAACGGGGATGGAATCGACAGTGGCGATTGC
GAAATCTGGCAGCGATTTATATCATAACAACGCAAGGACCACGAGTTCTG
CCGGAAAGATGGGCTCGGTGGTCAGCGCAACCGCAAACGGGGATGGAATC
GACACAGCAGCAGCAGCAGCAGCAGTAGCAGCAGGAGAAGGAGGAGCAGA
GACGGTAAATGCGACGAAGACGCCAACAGGAACGACAATGTTTACGGCGG
TTGCGAAAGTTTGCGAAGGATCGGCATGTATCCGCTGGGCGGAAGACCTG
GATACATCAGACGTGCCGCGTACACTGGAAGTGGAGAAGGTTGGGGAGAC
AGACATGACCAAACGAATAGGAATCGTCACCGGTAGCGGTGATTGTTGTA
ACAACAGTCAGGAAGAGAAAGAACCCGTGTTGGGCGGTGGGCGGGGGGCG
TCCCTACCGCGCCAACAGCAACAACCGCCAACAGAAAACCTCGAACTGAC
AAGCCGGGGGCACAATCCTCCAGAACAGGCCACTTCCAAACATGCTGATG
TGACTGATGTCGAGCTTGGGAGGCAGCTGTCCTCCTTGTCTGGTACCGTT
ACAGCTGCGGCTGTAGCCAGCGTCGCAACTGTGTGCTCCTCAGCTACGGC
ATCACCCGAGGGTCAAATTGGATTCGTTGGCTTCCAGCCACCATCACCTA
CACAATTCCGGTCGATGAAGTCCAAGTCGAACGTAACGGACACTTCTGGG
GCCTGTGACAGCGAGTACAGCTGCAAGAGCTTGATCGATGTTGGGGGCGG
CAGTAGCAGCTGCGAGATAGGGCCGCCGGGCATGATCTTTTCGTCCGTCG
GATCCGCAGGGAGCGCATTATCCTCTGCCACCTCGACCGCATCAGCTTCT
CGAGGCGGCGGCATTGGCGGCATTGGCGGTACTGGCGGCATTGGCGGTAT
TGGCTGCTTCGACTATCGTCAACTTAACCCGACCTCTACAGCATCGACGC
CGGGTTCCGCCGCCACGTCTGTCGCCGTTGCCGAAACGCTGGTCACCGCG
CAGGTATTGGCCACCGAGAGCTGTTACTCCATTGGTGGGGAGGAGGAATG
GTGGGGCCGAGACGGAGACGGCGAAGGCATCTTTAGGGGCAGCAATGGCG
GCGGCGGCGACTGCGGCTGCGGCGATAACGACAGCAACTCGCCGGGCGAT
GACGATAGAAGCGCCGGTCACAAGGCTAGCCCAACAGTCCCCGAGCCGCA
GGACGTGCATGGAGACGCCGGCGGCGGTCCTAGCCCCGGCACCGCGGGCG
TCGGCGGGGGAAATAGCTCCGCGGCGAAAGGAGGTGGAGTTACTGGAGGG
CCGTCTCCGGCGCCAGACGGAGGACAGCAGCAGCAGCAGCAGCAGTAGCA
GCAGGAGAAGGAGGAGCAGAGACGGTAAATGCGACGAAGACGCCAACAGG
AACGACAATGTTTACGGCGGTTGCGAAAGTTTGCGAAGGATCGGCATGTA
TCCGCTGGGCGGAAGACCTGGATACATCAGACGTGCCGCGTACACTGGAA
GTGGAGAAGGTTGGGGAGACAGACATGACCAAACGAATAGGAATCGTCAC
CGGTAGCGGTGATTGTTGTAACAACAGTCAGGAAGAGAAAGAACCCGTGT
TGGGCGGTGGGCGGGGGGCGTCCCTACCGCGCCAACAGCAACAACCGCCA
ACAGAAAACCTCGAACTGACAAGCCGGGGGCACAATCCTCCAGAACAGGC
CACTTCCAAACATGCTGATGTGACTGATGTCGAGCTTGGGAGGCAGCTGT
CCTCCTTGTCTGGTACCGTTACAGCTGCGGCTGTAGCCAGCGTCGCAACT
GTGTGCTCCTCAGCTACGGCATCACCCGAGGGTCAAATTGGATTCGTTGG
CTTCCAGCCACCATCACCTACACAATTCCGGTCGATGAAGTCCAAGTCGA
ACGTAACGGACACTTCTGGGGCCTGTGACAGCGAGTACAGCTGCAAGAGC
TTGATCGATGTTGGGGGCGGCAGTAGCAGCTGCGAGATAGGGCCGCCGGG
CATGATCTTTTCGTCCGTCGGATCCGCAGGGAGCGCATTATCCTCTGCCA
CCTCGACCGCATCAGCTTCTCGAGGCGGCGGCATTGGCGGCATTGGCGGT
ACTGGCGGCATTGGCGGTATTGGCTGCTTCGACTATCGTCAACTTAACCC
GACCTCTACAGCATCGACGCCGGGTTCCGCCGCCACGTCTGTCGCCGTTG
CCGAAACGCTGGTCACCGCGCAGGTATTGGCCACCGAGAGCTGTTACTCC
ATTGGTGGGGAGGAGGAATGGTGGGGCCGAGACGGAGACGGCGAAGGCAT
CTTTAGGGGCAGCAATGGCGGCGGCGGCGACTGCGGCTGCGGCGATAACG
ACAGCAACTCGCCGGGCGATGACGATAGAAGCGCCGGTCACAAGGCTAGC
CCAACAGTCCCCGAGCCGCAGGACGTGCATGGAGACGCCGGCGGCGGTCC
TAGCCCCGGCACCGCGGGCGTCGGCGGGGGAAATAGCTCCGCGGCGAAAG
GAGGTGGAGTTACTGGAGGGCCGTCTCCGGCGCCAGACGGAGGA back to top
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