mRNA_H-paniculata_contig7806.15828.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig7806.15828.1
Unique NamemRNA_H-paniculata_contig7806.15828.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig7806.15828.1 vs. uniprot
Match: D7G2R4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2R4_ECTSI)

HSP 1 Score: 392 bits (1007), Expect = 1.920e-129
Identity = 183/236 (77.54%), Postives = 204/236 (86.44%), Query Frame = 2 
Query:  515 RVGLPLLARLSAIAGLFVAYLPHLLRSSKYRRDWSLGCLLQKTDKRRNVTDMLVWTSLIYILPSIYGLYVHQYGIAMLQLFTTVGSTLFHLTRETKFFNLDNVFATSLLITTLWGFFLAIHHGVWWYVAMVGIGGPFAVFCIVRCGMPGLVCRHPSGHGLCRKSNPEYDFFHMLWHLSSGLGTLASIHFFEDNFPAVEAGGGWFYYFPDIPVVPAVSLAISALVNLYGNRVGVMPL 1222
            R+G   LAR+ A  G  VA LPHLLRSSKYRRD  LGCLL+  DKRR +TDMLVWTS +Y LPS+YGLY HQYGIA LQL TT+GSTLFHLTRETKFFNLDNVFATSLL TT W  +L + HGVWWYV ++G+GGPFA+FCIVRCGMPGLVCRHP+G GLCR+SNPEYDFFHMLWHLSSGLGTL +IHFFE  FPA EAGGGWFY+FPD+PVVP V+LA+SAL+NLYGNRVGVMPL
Sbjct:  141 RLGSMTLARVFATIGSLVACLPHLLRSSKYRRDRGLGCLLETGDKRRPLTDMLVWTSFVYCLPSVYGLYAHQYGIAGLQLMTTIGSTLFHLTRETKFFNLDNVFATSLLSTTAWSLYLGVTHGVWWYVVVIGLGGPFAIFCIVRCGMPGLVCRHPAGSGLCRRSNPEYDFFHMLWHLSSGLGTLITIHFFEVYFPAEEAGGGWFYFFPDVPVVPTVALALSALINLYGNRVGVMPL 376
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BLAST of mRNA_H-paniculata_contig7806.15828.1 vs. uniprot
Match: A0A835Z7G3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7G3_9STRA)

HSP 1 Score: 261 bits (666), Expect = 6.320e-78
Identity = 131/228 (57.46%), Postives = 163/228 (71.49%), Query Frame = 2 
Query:  545 SAIAGLFVAYLPHLLRSSKYRRDWSLGCLLQKTDKRRNVTDMLVWTSLIYILPSIYGLYVHQYGIAMLQLFTTVGSTLFHLTRETKFFNLDNVFATSLLITTLWGFFLAIHHGVWWYVAMVGIGGPFAVFCIVRCGMPGLVCRHPSGHGLCRK-SNPEYDFFHMLWHLSSGLGTLASIHFFEDNFPAVEAGGGWFYYFPDIPVVPAVSLAISALVNLYGNRVGVMPLA 1225
            +A+ GL  A  P+LLRSS+YRRD  L C L + D RR + D LVWTSL+Y +P++YG+  HQYG+A LQ  TTVGSTLFH  RET++FNLDNV A +LL TT W   LA    VW + A+V  G P A + +V CGMPG+VC  PSG G  R+ SNP YD +HMLWHL SG GT+ASIHFF   +P ++AGGG F +FPD+PVVP VSL +SA VN+YGN  G +PL+
Sbjct:  186 AALLGLGCALSPYLLRSSRYRRDPRLRCRLGRRDVRRRLRDPLVWTSLVYAVPALYGVAAHQYGVAALQAATTVGSTLFHRARETRYFNLDNVGALALLFTTAWSLALAARARVWAHAAVVLAGTPLAGYFMVACGMPGVVCACPSGDGTLRRASNPLYDHYHMLWHLVSGFGTIASIHFFASRYPHLDAGGGHFEHFPDVPVVPFVSLLLSAAVNVYGNWAGALPLS 413
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BLAST of mRNA_H-paniculata_contig7806.15828.1 vs. uniprot
Match: A0A7S2XVH3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVH3_9STRA)

HSP 1 Score: 193 bits (491), Expect = 1.430e-53
Identity = 102/231 (44.16%), Postives = 143/231 (61.90%), Query Frame = 2 
Query:  530 LLARLSAIAGLFVAYLPHLLRSSKYRRDWSLGCLLQKTDKRRNVTDMLVWTSLIYILPSIYGLYVHQYGIAMLQLFTTVGSTLFHLTRETKFFNLDNVFATSLLITTLWGFFLAIHHGVWWYVAMVGIGGPFAVFCIVRCGMPGLVCRHPSGHGLCRKSNPEYDFFHMLWHLSSGLGTLASIHFFEDNFPAVEAGGGWFYYFPDIPVVPAVSLAISALVNLYGNRVGVMPL 1222
            L ARL  +  +    +P+L ++S  R D S G  L   +KRR+  D LV+TSL Y+   IY   V QYGIA+LQ++T++GSTL+HLTRET FFN DN+ ATSLL+ T +G +L++   + W + +   G P     + +CGMPG VC+   G   C     EY  +H  WH++S  GT+ S++FFE NFP  EAG GWF   P +P+ P +++ IS + N  GN+ GVMPL
Sbjct:   81 LFARLVTLFSILFMGIPYLAKASPLRSDPSRGIKLSPKEKRRSFADPLVFTSLFYMFAGIYAFSVGQYGIALLQIYTSMGSTLYHLTRETMFFNCDNIGATSLLLLTAYGLYLSLGIDLGWTI-LAAAGIPLGGAILHKCGMPGEVCK---GKRTCCS---EYPSWHSAWHVASSFGTVISVYFFEKNFPDHEAGAGWFAEMPFLPIAPTIAVVISVVQNFIGNKAGVMPL 304
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BLAST of mRNA_H-paniculata_contig7806.15828.1 vs. uniprot
Match: A0A7S1XWR7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XWR7_9STRA)

HSP 1 Score: 140 bits (353), Expect = 2.120e-34
Identity = 95/240 (39.58%), Postives = 131/240 (54.58%), Query Frame = 2 
Query:  518 VGLPLLARLSAIAGLFVAYLPHLLRSSKYRRD-WSLG---CLLQKTDKRRNVTDMLVWTSLI-YILPSIYGLYVHQYGIAMLQLFTTVGSTLFHLTRETKFFNLDNVFATSLLITTLWGFFLAIHHGVWWYVAMVGIGGPFAVFCIVRCGMPGLVCRHPSGHGLCRKSNPEYDFFHMLWHLSSGLGTLASIHFFEDNFPAVEAGGGWFYYFPDIPVVPAVSLAISALVNLYGNRVGVMPL 1222
            +GL   AR++A A   +  LP+L R+S YR D    G   CLL+  D  R+V D+ VW+S + +  P++Y     Q+ +  LQL   + S L+HL+RET FFN+DNVF  SL  T      LA   GV WYV +  +  P A F +V C  PG+V R   G    R ++  YDF+H +WH +SG+ TL + +F     P  E G G   +FP    V   S+ +S  VNL GN  GVMP+
Sbjct:   17 LGLVRTARVAAGATALLPLLPYLGRASVYREDPGGRGQGFCLLRPEDCWRSVGDVQVWSSWVCFGGPALYSFLSAQWSLGALQLGAAITSGLYHLSRETLFFNVDNVFGLSLGCTVFVAVKLAWDRGVMWYVIVNVLVLPVAGFLLVYCDFPGVVVR--QGEKARRLAHERYDFWHAVWHAASGVVTLLNTYFLVTYVPESECGAGMEPWFPYPSTVAFWSVLLSIGVNLVGNLAGVMPV 254
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BLAST of mRNA_H-paniculata_contig7806.15828.1 vs. uniprot
Match: A0A7S3XR67_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XR67_HETAK)

HSP 1 Score: 115 bits (287), Expect = 4.120e-25
Identity = 62/143 (43.36%), Postives = 92/143 (64.34%), Query Frame = 2 
Query:  533 LARLSAIAGLFVAYLPHLLRSSKYRRDWSLGCLLQKTDKRRNVTDMLVWTSLIYILPSIYGLYVHQYGIAMLQLFTTVGSTLFHLTRETKFFNLDNVFATSLLITTLWGFFLAIHHGVWWYVAMVGIGGPFAVFCIVRCGMPG 961
            LA L+A+  + +  LP+LL+ S  RRD S+G  L + D  R ++D LV+TSL+Y LP +Y LY +   + +L L+T+ GST+FHLTRET FFN DN+ A +L++   +GF+L++   + W  A +  G P   F +  CGMPG
Sbjct:   90 LAELTAMCAVLLYILPYLLKPSILRRDKSIGVNLTEEDLWRPISDPLVYTSLLYALPGLYALYYNMPFLGILHLYTSFGSTMFHLTRETMFFNWDNIGAMALMLIACFGFYLSLGTDMIWTAAAI-TGLPIGAFLLAYCGMPG 231
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BLAST of mRNA_H-paniculata_contig7806.15828.1 vs. uniprot
Match: A0A7S3HNL6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNL6_9STRA)

HSP 1 Score: 109 bits (272), Expect = 6.610e-23
Identity = 78/236 (33.05%), Postives = 129/236 (54.66%), Query Frame = 2 
Query:  542 LSAIAGLFVAYLPHLLRSSKYRRDWSLGCLLQKTDKRRNVTDMLVWTSLIYILPSIYGLYVHQYGIAMLQLFTTVGSTLFHLTRETKFFNLDNVFATSLLITTLWGFFLAIH-HGVWWYVAMVGIGGPFAVFCIVRCGMPGLVCRHPSGHGL----CRKSNPE-YDFFHMLWHLSSGLGTLASI---HFFEDNFPAVEAGGGWFYYFPDIPVVPAVSLAISALVNLYGNRVGVMPL 1222
            L  ++ +  A+ P+L + SK+RR + +G +       RN  D L+ TS  Y+L +++     Q+ IA++   T +GS+L+H  RE +FFNLDN+FATSLL T ++    +   H +++ + ++G+  P A+F IV CGMP  + R     GL    C ++  E YD  H LWHL+S +G   ++   HF  + +   +           I  +P ++L++S   N+ GN  G+MPL
Sbjct:   65 LVLVSYMISAFFPYLRKPSKHRRSF-VGSV------DRNWNDQLMTTSSSYLLSAVFAFSYGQFEIALICFITYIGSSLYHRHREMEFFNLDNIFATSLLFTCVYTLVSSYFTHEIYFIIGLMGL--PTAMFLIVYCGMPADI-RFKDIPGLEVVCCVRTGRELYDTVHALWHLASSVGPCMAVWYFHFKANEYDKTDMSDLNKLDDQIISRLPYLALSLSIFANIAGNIDGIMPL 290
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BLAST of mRNA_H-paniculata_contig7806.15828.1 vs. uniprot
Match: A0A1V9YIV5_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YIV5_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 2.660e-11
Identity = 52/154 (33.77%), Postives = 75/154 (48.70%), Query Frame = 2 
Query:  623 GCLLQKTDKR-----RNVTDMLVWTSLIYILPSIYGLYVHQYGIAMLQLFTTVGSTLFHLTRETKFFNLDNVFATSLLITTLWGFFLAIHHGVWWYVAMVGIGGPFAVFCIVRCGMPGLVCRHPSGHGLCRKSNPEYDFFHMLWHLSSGLGTLA 1069
            GC    T KR     R  TD L+ T+L+Y+L +I    V QY  A+LQL +++ STLFH +RETKF  LD + + +L I   +    AI + +   + +  + G    F  + CGMPG                  Y+ +H  WH  SG  TL+
Sbjct:    6 GCFCPPTAKRLRHNTRAWTDPLLLTNLVYVLAAIVSYCVGQYTCAILQLGSSIASTLFHRSRETKFLPLDALISGTLGIIAGYVVLDAIENELHHVIGLKMLHGAGCAFTWIYCGMPG---------------GARYEIWHRRWHFVSGYTTLS 144
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BLAST of mRNA_H-paniculata_contig7806.15828.1 vs. uniprot
Match: A0A067CNL8_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CNL8_SAPPC)

HSP 1 Score: 65.1 bits (157), Expect = 1.260e-8
Identity = 46/154 (29.87%), Postives = 72/154 (46.75%), Query Frame = 2 
Query:  623 GCLLQKTDKR-----RNVTDMLVWTSLIYILPSIYGLYVHQYGIAMLQLFTTVGSTLFHLTRETKFFNLDNVFATSLLITTLWGFFLAIHHGVWWYVAMVGIGGPFAVFCIVRCGMPGLVCRHPSGHGLCRKSNPEYDFFHMLWHLSSGLGTLA 1069
            GC      KR     R  TD L+ T+L+Y+  ++    V QY   +LQL +++ ST+FH +RETK+  LD + + +L I   +    AI + +   + +  + G    F  + CGMPG                  Y+ +H  WH  SG  TL+
Sbjct:    6 GCFCPPAAKRLRHNTRPWTDPLLLTNLVYVAAAVVSYAVGQYTCGLLQLGSSIASTMFHRSRETKYLPLDAIISGTLGIIAAYVVLDAIENELHHVLGLKLLHGAGCAFTWIYCGMPG---------------GARYETWHKRWHYVSGYTTLS 144
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BLAST of mRNA_H-paniculata_contig7806.15828.1 vs. uniprot
Match: A0A2R5GMG3_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GMG3_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 6.830e-7
Identity = 36/134 (26.87%), Postives = 65/134 (48.51%), Query Frame = 2 
Query:  665 DMLVWTSLIYILPSIYGLYVHQYGIAMLQLFTTVGSTLFHLTRETKFFNLDNVFATSLLITTLWGFFLAIHHGVWWYVAMVGIGGPFAVFCIVRCGMPGLVCRHPSGHGLCRKSNPEYDFFHMLWHLSSGLGTL 1066
            D ++W++  Y++ S     +  + +A+L +F T GS+L+HL  E     LD +FA++L +  +   F A+    W Y+    +G P  +F  V   +P                +  Y F+H+LWH ++  GT+
Sbjct:   31 DQVMWSNAAYLVASGCAAGLGVWDVAVLLVFVTGGSSLYHLHAERSHLWLDALFASALFVMAVVALFDAVQKQHWAYIGGCALGFPLLIFLFVASDLP---------------ESKNYAFYHILWHYATAFGTV 149
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BLAST of mRNA_H-paniculata_contig7806.15828.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 4.800e-5
Identity = 34/75 (45.33%), Postives = 42/75 (56.00%), Query Frame = 3 
Query:  180 WPRVLPGMVQ--GLFSTSIEGKDAVVGG*GRDRGWNINLVTQPAQSPDVNINDLWLFASLNSRV*RERYGTIDAL 398
            W R    +VQ  G    + +G   ++   G  RGW + LVTQPAQSPD+NINDL  FASL  RV      +ID L
Sbjct:  289 WLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSIDEL 363
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7806.15828.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7G2R4_ECTSI1.920e-12977.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z7G3_9STRA6.320e-7857.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2XVH3_9STRA1.430e-5344.16Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1XWR7_9STRA2.120e-3439.58Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3XR67_HETAK4.120e-2543.36Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3HNL6_9STRA6.610e-2333.05Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A1V9YIV5_9STRA2.660e-1133.77Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A067CNL8_SAPPC1.260e-829.87Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A2R5GMG3_9STRA6.830e-726.87Uncharacterized protein n=1 Tax=Hondaea fermentalg... [more]
A0A6H5JIM0_9PHAE4.800e-545.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7806contigH-paniculata_contig7806:4814..9749 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score332.8
Seed ortholog evalue1e-88
Seed eggNOG ortholog2880.D7G2R4
Hectar predicted targeting categorysignal peptide
EggNOG OGs2B6F1@1,2S0M2@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-11_003200.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1691
Cds size561
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7806.15828.1prot_H-paniculata_contig7806.15828.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig7806 7365..9286 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930970.1944733-UTR-H-paniculata_contig7806:4813..53291622930970.1944733-UTR-H-paniculata_contig7806:4813..5329Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7806 4814..5329 +
1691481532.581456-UTR-H-paniculata_contig7806:4813..53291691481532.581456-UTR-H-paniculata_contig7806:4813..5329Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7806 4814..5329 +
1622930970.2121923-UTR-H-paniculata_contig7806:6878..69731622930970.2121923-UTR-H-paniculata_contig7806:6878..6973Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7806 6879..6973 +
1691481532.597122-UTR-H-paniculata_contig7806:6878..69731691481532.597122-UTR-H-paniculata_contig7806:6878..6973Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7806 6879..6973 +
1622930970.2271547-UTR-H-paniculata_contig7806:7308..73641622930970.2271547-UTR-H-paniculata_contig7806:7308..7364Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7806 7309..7364 +
1691481532.6163926-UTR-H-paniculata_contig7806:7308..73641691481532.6163926-UTR-H-paniculata_contig7806:7308..7364Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7806 7309..7364 +
1622930970.3050246-UTR-H-paniculata_contig7806:9286..97491622930970.3050246-UTR-H-paniculata_contig7806:9286..9749Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7806 9287..9749 +
1691481532.6845562-UTR-H-paniculata_contig7806:9286..97491691481532.6845562-UTR-H-paniculata_contig7806:9286..9749Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7806 9287..9749 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930970.2413611-CDS-H-paniculata_contig7806:7364..74271622930970.2413611-CDS-H-paniculata_contig7806:7364..7427Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7806 7365..7427 +
1691481532.629072-CDS-H-paniculata_contig7806:7364..74271691481532.629072-CDS-H-paniculata_contig7806:7364..7427Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7806 7365..7427 +
1622930970.2554753-CDS-H-paniculata_contig7806:7772..79231622930970.2554753-CDS-H-paniculata_contig7806:7772..7923Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7806 7773..7923 +
1691481532.6421351-CDS-H-paniculata_contig7806:7772..79231691481532.6421351-CDS-H-paniculata_contig7806:7772..7923Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7806 7773..7923 +
1622930970.2721462-CDS-H-paniculata_contig7806:8465..86421622930970.2721462-CDS-H-paniculata_contig7806:8465..8642Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7806 8466..8642 +
1691481532.6571336-CDS-H-paniculata_contig7806:8465..86421691481532.6571336-CDS-H-paniculata_contig7806:8465..8642Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7806 8466..8642 +
1622930970.287114-CDS-H-paniculata_contig7806:9116..92861622930970.287114-CDS-H-paniculata_contig7806:9116..9286Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7806 9117..9286 +
1691481532.6707175-CDS-H-paniculata_contig7806:9116..92861691481532.6707175-CDS-H-paniculata_contig7806:9116..9286Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7806 9117..9286 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig7806.15828.1

>prot_H-paniculata_contig7806.15828.1 ID=prot_H-paniculata_contig7806.15828.1|Name=mRNA_H-paniculata_contig7806.15828.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=187bp
MLVWTSLIYILPSIYGLYVHQYGIAMLQLFTTVGSTLFHLTRETKFFNLD
NVFATSLLITTLWGFFLAIHHGVWWYVAMVGIGGPFAVFCIVRCGMPGLV
CRHPSGHGLCRKSNPEYDFFHMLWHLSSGLGTLASIHFFEDNFPAVEAGG
GWFYYFPDIPVVPAVSLAISALVNLYGNRVGVMPLA*
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mRNA from alignment at H-paniculata_contig7806:4814..9749+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig7806.15828.1 ID=mRNA_H-paniculata_contig7806.15828.1|Name=mRNA_H-paniculata_contig7806.15828.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4936bp|location=Sequence derived from alignment at H-paniculata_contig7806:4814..9749+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGAGTACAGCACAAGAGTCACATTCCTAAGGTGATGTTCATCTGCGCCGT
TTCGCGTCTAGATCCTTCCCGCGATTTCGACGGGAAGATTGTAATTTGGC
GTGTTTGAATCATCAAGCAGGCTCAGAGGAATTCGGCCCGGCGTGAACGG
GAGCAGCAATACGAGTTCGACGTGACCATTGGCCCCGAGTGTTACCAGGA
ATGGTACAAGGACTCTTTTCTACCAGCATTGAAGGAAAAGATGCCGTAGT
TGGAGGTTGAGGAAGGGACCGGGGGTGGAACATCAATCTCGTAACTCAGC
CTGCGCAGTCACCAGATGTCAACATCAATGATTTATGGTTGTTTGCATCT
CTGAACAGTAGGGTTTGAAGGGAGCGTTACGGTACGATAGACGCCTTGTG
GAGGGGGTAAGGAGCATATACGATGCGTACGACTCGGTAACCTTAGAGAG
GGTGCAGCAGGGCCTCTCAAGTGGGATAATCAGGTCTTGAAGGCGCTGGG
AGGCAACGATTTCGAGGTACAGCACACCGAAACCAAGAAAAAGCTGCGTG
CGGGAAGTCTGCCAAAATCGATCAAAATTGATCGAGAGGCTTTCGATGCG
GCGGTAGAATGGTGAATTGATGGGAACGAGGAAAGCTGCGAAGAATAAAA
TTAACGTGAAAAACTCCAAGAGATCCGACGCAAAAAACGGTTTTGATTCG
AAGGTCGTTGCAACAAGTTACAAACTTATCATCGCAGACTTATGGGACGG
AGGGAGTATATATATATATACAAAAGTTGATAGCAGAATTTTTTTTTGCG
AGGAAGTTTGACCGTGAAATATCCATTACATCATCACTTGTGTTGTGAGG
TCCCGACTGCGACAACTGTTGCGGGCTGCCAGCTGGTGCGTTTGTGTTTA
CTGTCACGCATCACAGGACTTCATACACACAGCGGCTAGGGAACTCTCGG
GAGATGCTGGTGCTTGCCAACCTCTCTCCCTATCTTCCTGTTGCTGTTAC
CCCAGTATCAACAGGCAGATATAATATGGTGCTGCAGTAGTACACCAACT
GTTGTATACGTTGTACTTTATTTATTTGCCGTCTGTTTCTTCCGTGACCG
TGCGCAACTCTACTGGCTGTATCATCCTATTTCGGCCCTTCAGCTGGCTG
TGACTGCTCGGTGGAAGCAATATGTGTACCGCAGTCTGTTAGTTGCACCC
CTTCCACATCAACTGTCAAGCACATGGTGTCGCAACTGCAGCAACCAGTC
GTAGACGTGCAATGATTGAAATATAAATTGTTATGTTTCACCCCTTTCGC
TCCTACCGTCCCTGGGCACCTATTGGTTTCGTTGTACCTTTTCTCATTTT
ACTGTAGTTTTATTTTTTTCTTTAACCCCCGGAAGGCTAAGGCAAAAGCC
TTTATTCGATGCTTCCATACTCGAGTGTTTCACCAAAGTATTTCTACACT
TCCTTTAACAGAACAGATTTATTATTCCTCTGCGGGGTAGGCGCCACCCC
GGCTCGGCCGAACCAGGTAGGCAGTGTGGGGGTTGCACCCACTACAAGAC
CTCTGACTAGACTTCCAATCATGCTCAGTTCACGCGCTACCCTACCCGTT
CGGGCGTAGGTCCGTGATTTTACTGTAGGTCTCATGATGTTATTAGTCTC
ATGGCATACCAGTATGATTGGTGATGCCATCCGCCCGAAAACAAACTTCG
TCCGTCCCAATTGGTCCCCCCCCCCCTCCCCATTCTAGGACTCGAAACTC
TGAGATTTCGTGTGTAACAAAATGTCATACTACAGGTCCCCAGGAGTCAA
AAGGTTTAAACAGCTACTCACTTGAAACTACCGACAGGTAGTTGTTCAAA
AATAACTACTCACTTTAAGCACCCGACATATAGTAATTTGAAAGCAACTA
TTGGGATTAACAATTGATTAGTATTTGATGGTTGTTCAGGTTGTTGAGGT
ATTCAAGTGTTCACCGTACCACGAATTTTTTTTTGAGTATTTTTCTCAGG
TTGACTCGTTGTACTTTACTCTGACCCTTGCATTTTCTTCTATTTTTTCA
ACTGTACTGTTTCAGGGTTGGCTTGCCGCTTCTTGCAAGACTCTCGGCAA
TCGCAGGGTTGTTTGTCGCGTACCTACCGCACCTGCTGCGCTCGTCCAAG
TACCGCAGAGGTAGGCGGGTGTTGTTCTTTTTCCTTGGCTACTGCCTGTG
CTCCAGGACTTGATGCTTTGAGAAAATGGCAGAATGACCCAACCCCACCC
TAGAATATGGGGCGGTTGCACGGGCTAAATTTGTCGTCAGCACAACAGGT
TGTGAGCGATACCGCTGCATGTCGGTACCTGTTCGGTACAAGGACCGCTT
CAGTGCTGCTGAGTTCCATTCGGCATGACGAATACAATAGGGCCGGCCTC
ATTGCTGCCGCCCCGCCGATGCGCACGTGAAGAAATCCTTACGCAGCCCG
CCTGCCCGAATGTACGCGTGCCATGTGTTGTCTTTCGACAAGCAGACTGG
TCGTTGGGTTGCCTGCTGCAGAAGACCGACAAGCGGCGAAATGTAACGGA
TATGCTAGTATGGACGAGCTTGATCTATATCTTGCCGTCCATTTACGGGT
TGTACGTCCATCAGGTATATACTTTTCCTGTTGCGAAGTGTTGTGCTTTC
TCTTCGTCATGCAAACGCACCGTTGATTCCCGTGCCGTACAATGCTCTTG
GTGGGGATGTAAGTCCCTATGTTGCCATTGTACATAATTGGGCGGTTTTC
ATACAGCGGTAGTATTGACACCAAGCCTTGAGACGGATCTGACGACACCA
CATACGGCAGCTCGAGAAACACAAAGCCGCCACGAGCATTAACTTCGCCG
ACACGAACAAGCCTATTGACTGCGACAGGCGTGGAGGCATTGGTGGTGTT
TTGTAGATCCTTTTTTAGTTGATCCGTTCCGTTTGTTTTTTTCCTCGCCG
GTTTTGCAGTACGGCATCGCCATGCTTCAACTGTTTACGACGGTAGGATC
CACGCTGTTCCACCTGACGCGCGAGACAAAGTTCTTCAACCTCGACAACG
TCTTCGCCACGTCCCTTCTAATAACTACTCTGTGGGGCTTCTTCCTCGCT
ATTCACCACGGTGAGTCAAATTATCGCACAGCGGTGAATAACGAGGCCAC
CCACACACCTGAAGTAGCAATAGAAGCAGCGCTCAACGCTGCAACACCCA
ATAGATTGAAATTGCTCGGAGAAAACCGCTGGGTTTCGTTTTCAAGTTTT
CATGGTTTGCTGTATTTGCTGTATTTGCTGTATTTGCTTTCACGGAAGGG
CGTTGTGCTCCACGAACGTTTCGCGGTATGCATAGCCGTTTTTGATTGCT
GCACATGACAGCACGACTATACTCGTTGCGTACGGCACAGGCATGAACTA
ATTGCAGTCATTTTTGCTTCGCGTTGGTGTATAGCAATTCTGCTCGTCCT
ATCTCACATTTTGTTGTTGGCGTTTTGTGGTCGCGGCGAGATATTTGTCT
CTCGTTTTGTCCCGAACGGCACAACCTTGTACGTTTGAAGAAAGACGTGT
GCGTGTGCGTGTGTGTGTTTTGCCAACAAGTAATCCTGGTTTAAAAACCG
TGTGCCAAATATTGTCTTGTGGGCTTGTGACGTACCCTGCCGGCGGCGCC
AGGTGTATGGTGGTACGTGGCGATGGTCGGCATTGGAGGGCCGTTTGCCG
TCTTCTGCATCGTGCGTTGCGGAATGCCGGGACTAGTGTGTCGACACCCT
AGCGGGCATGGTCTCTGCCGAAAGAGCAACCCCGAATATGACTTCTTCCA
TATGCTGTGGCATTTATCTTCTGGACTAGGTAAAAACGTATCCTGTCGCG
CTAATTCCCTATTCGAAAAATGGATGTGAATCGATGGCGGTGGTGCTGGC
GATGAGTTTGAGTCATGTAGATGGTGCTTGCTGATGGTCGCAGAACTGCC
AACGTCCTCGCGTTGGGGTTGGTGGCATTTACCACTTTTGTGGGGTCGTG
TTTGCTTGCAGGTTGTCATAGCAGCGTTTAATCCGTGGGATTAGCACAGA
ACGGGGAAGCGGAAAATGACGAAATGGTCGAAATATAGGGTTTTTGTTGA
GTATGCAAACTGTTGTTCCGAGGTGTATTCCGGGATTTGGTCAGGTGCTG
AGAACCGTCGTCTGCTCAAATGTAAACCACGTGCGTGCTGACGTCGCTTA
TGCCTTGCTCATGTGCCATCGAACCCTACGCACTAGTCCTTCCCACCCGA
CCGACACACTTGCCCCCTACCCGACCCATCTCTCCTCTGCCCCGTGTATA
TAGGCACTCTGGCGTCGATCCATTTCTTCGAAGACAACTTTCCGGCGGTA
GAGGCCGGTGGAGGATGGTTCTACTATTTCCCGGATATTCCCGTGGTCCC
TGCCGTGTCGCTGGCGATCAGCGCGCTCGTCAACTTGTACGGCAATAGGG
TCGGGGTCATGCCACTGGCATGATTGGTGCGCTAAGGGTGCTGTTTCGGG
TGCACTCCTGCCTGACGTCGATTTTCATTTTTCCACGCCTCGAGGATATT
GTGATTTAGTGAATTTTGATAGGTTAGGTCCCATCTGGAATCGACGACAC
GTTTACATTACGAAGCTTTCCATCCACCAACGACGTTCGCGGAGATGCAA
CATTTTTAACCATCTCGCATGCATCTATGTGATAGTGGTAAAACTGTAGA
TTATTTTCATTGTAACAGCCGATCCTGGAAATTCGGGATCGATCTTTTTA
TGTAGGATGAAATCGTTTGTGCTAATATCACCAACAAGGACTGCTGAATC
ATGCTGAACCGTCCAAGACTGAGTGAAAGTCCATGACGTCAACGTTCACG
GGTCGTTGTTCCTTTTTAATCGAGCAATTGGCTGCCTAGATATGGCAAAA
TAAGAAAAACGTATATAGCCGGCAACGGTTTTTCTC
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Coding sequence (CDS) from alignment at H-paniculata_contig7806:4814..9749+

>mRNA_H-paniculata_contig7806.15828.1 ID=mRNA_H-paniculata_contig7806.15828.1|Name=mRNA_H-paniculata_contig7806.15828.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1122bp|location=Sequence derived from alignment at H-paniculata_contig7806:4814..9749+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTAGTATGGACGAGCTTGATCTATATCTTGCCGTCCATTTACGGGTT
GTACGTCCATCAGATGCTAGTATGGACGAGCTTGATCTATATCTTGCCGT
CCATTTACGGGTTGTACGTCCATCAGTACGGCATCGCCATGCTTCAACTG
TTTACGACGGTAGGATCCACGCTGTTCCACCTGACGCGCGAGACAAAGTT
CTTCAACCTCGACAACGTCTTCGCCACGTCCCTTCTAATAACTACTCTGT
GGGGCTTCTTCCTCGCTATTCACCACGTACGGCATCGCCATGCTTCAACT
GTTTACGACGGTAGGATCCACGCTGTTCCACCTGACGCGCGAGACAAAGT
TCTTCAACCTCGACAACGTCTTCGCCACGTCCCTTCTAATAACTACTCTG
TGGGGCTTCTTCCTCGCTATTCACCACGGTGTATGGTGGTACGTGGCGAT
GGTCGGCATTGGAGGGCCGTTTGCCGTCTTCTGCATCGTGCGTTGCGGAA
TGCCGGGACTAGTGTGTCGACACCCTAGCGGGCATGGTCTCTGCCGAAAG
AGCAACCCCGAATATGACTTCTTCCATATGCTGTGGCATTTATCTTCTGG
ACTAGGTGTATGGTGGTACGTGGCGATGGTCGGCATTGGAGGGCCGTTTG
CCGTCTTCTGCATCGTGCGTTGCGGAATGCCGGGACTAGTGTGTCGACAC
CCTAGCGGGCATGGTCTCTGCCGAAAGAGCAACCCCGAATATGACTTCTT
CCATATGCTGTGGCATTTATCTTCTGGACTAGGCACTCTGGCGTCGATCC
ATTTCTTCGAAGACAACTTTCCGGCGGTAGAGGCCGGTGGAGGATGGTTC
TACTATTTCCCGGATATTCCCGTGGTCCCTGCCGTGTCGCTGGCGATCAG
CGCGCTCGTCAACTTGTACGGCAATAGGGTCGGGGTCATGCCACTGGCAT
GAGCACTCTGGCGTCGATCCATTTCTTCGAAGACAACTTTCCGGCGGTAG
AGGCCGGTGGAGGATGGTTCTACTATTTCCCGGATATTCCCGTGGTCCCT
GCCGTGTCGCTGGCGATCAGCGCGCTCGTCAACTTGTACGGCAATAGGGT
CGGGGTCATGCCACTGGCATGA
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