mRNA_H-paniculata_contig7793.15817.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig7793.15817.1
Unique NamemRNA_H-paniculata_contig7793.15817.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig7793.15817.1 vs. uniprot
Match: A0A6H5KR44_9PHAE (Lipoyl-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR44_9PHAE)

HSP 1 Score: 229 bits (583), Expect = 8.910e-66
Identity = 157/224 (70.09%), Postives = 172/224 (76.79%), Query Frame = 1 
Query:  256 RSAALLPRSSRLFSSSLPDHVVVGMPALSPTMTQGSIGKWGKQAGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEEGTQDIPVGTPIFVTVEDADSVAAFKDFTVDAAPTAPPSPAEEPAPVEAATPP-------AXXXXXXXXKVEPVXXXXXXXXXXXXXXXXXXXPPVTAGSAVDMVFKRDWGSGVRGSPLAHRMSAEQKNYVEKYGSTLQTPLEP 906
            RSA L+  +  L  SSLPDH+VVGMPALSPTMT G+IG WGKQ GDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVE GTQDI VGTPIFVTV+DADSVAAFKDF  +A    P + A  PA   A TP        A XXXXXX +    XXXXXXXXXXXXXXX    PP    S+ ++VFKRDWGSGVRGS LAHRMSAEQK YV+++GSTLQ PL+P
Sbjct:   29 RSAELVVNTRSL--SSLPDHIVVGMPALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIAVGTPIFVTVDDADSVAAFKDFEAEAVQGEPEAAA--PAAEAAPTPXXXXXXXAAKXXXXXXPEAXXXXXXXXXXXXXXXXXXSVEQPPAPV-SSQELVFKRDWGSGVRGSALAHRMSAEQKKYVKRFGSTLQQPLDP 247
[Close]
BLAST of mRNA_H-paniculata_contig7793.15817.1 vs. uniprot
Match: D8LTQ3_ECTSI (Lipoyl-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTQ3_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 1.780e-55
Identity = 125/218 (57.34%), Postives = 135/218 (61.93%), Query Frame = 1 
Query:  334 ALSPTMTQGSIGKWGKQAGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEEGTQDIPVGTPIFVTVEDADSVAAFKDFTVDAAPTAP---------------------------PSPAEEPAPVEAATPPAXXXXXXXXKVEPVXXXXXXXXXXXXXXXXXXXPPVTAGSAVDMVFKRDWGSGVRGSPLAHRMSAEQKNYVEKYGSTLQTPLEP 906
            ALSPTMT G+IG WGKQ GDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVE GTQDI VGTPIFVTV+DADSVAAFKDF  +A    P                           P+P   PAP        XXXX     VE                     PP    S+ ++VFKRDWGSGVRGS LAHRMSAEQK YVE++GSTLQ PL+P
Sbjct:   25 ALSPTMTHGNIGSWGKQEGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEAGTQDIAVGTPIFVTVDDADSVAAFKDFEAEAVQGEPEAAAXXXXXXXXXXXXXXXXXXXXXXXPAPEAAPAPXXXXXXXXXXXXTTAAPVE--------------------RPPAPV-SSPELVFKRDWGSGVRGSALAHRMSAEQKKYVERFGSTLQQPLDP 221
[Close]
BLAST of mRNA_H-paniculata_contig7793.15817.1 vs. uniprot
Match: A0A836CM78_9STRA (Putative dihydrolipoyllysineresidue acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM78_9STRA)

HSP 1 Score: 148 bits (374), Expect = 1.090e-36
Identity = 110/212 (51.89%), Postives = 131/212 (61.79%), Query Frame = 1 
Query:  298 SSLPDHVVVGMPALSPTMTQGSIGKWGKQAGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEEGTQDIPVGTPIFVTVEDADSVAAFKDFTVDAAPTAPPSPAEEPAPVEAATPPAXXXXXXXX--KVEPVXXXXXXXXXXXXXXXXXXX------------PPVTAGSAVDMVFKRDWGSGVRGSPLAHRMSAEQKNYVEKYGSTLQ 891
            ++LP H +VGMPALSPTM  G++ KW K AGDEIAAGD++C+VETDKATVDF+AQD+ F+AK LV EG Q I VG PI +TVED DSVAAF+ +   A   AP         V AATPPA   XXX    KVE V        XXXXXXXXXX             P   AG+    V   +WG  V  SPL +R+S EQK Y  ++G+TLQ
Sbjct:   35 ATLPSHTLVGMPALSPTMEHGNLAKWLKAAGDEIAAGDIICQVETDKATVDFEAQDEGFVAKLLVPEGAQSITVGDPILITVEDKDSVAAFESYEAPATKEAPXXXXXXXX-VAAATPPAVSPXXXAEAPKVEAVKPKTMPPPXXXXXXXXXXAKATEAAKSAQKAPDAPAGAPTASV---NWGQRVSRSPLYYRLSQEQKLYSSRFGATLQ 242
[Close]
BLAST of mRNA_H-paniculata_contig7793.15817.1 vs. uniprot
Match: A0A7S2DWD0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DWD0_9STRA)

HSP 1 Score: 145 bits (366), Expect = 9.890e-36
Identity = 114/201 (56.72%), Postives = 134/201 (66.67%), Query Frame = 1 
Query:  298 SSLPDHVVVGMPALSPTMTQGSIGKWGKQAGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEEGTQDIPVGTPIFVTVEDADSVAAFKDFTVDAAPTAPPSPAEEPAPVEAATPPAXXXXXXXXKVEPVXXXXXXXXXXXXXXXXXXXPPVTAGSAVDMVFKRDWGSGVRGSPLAHRMSAEQKNYVEKYGSTLQTPL 900
            S+LP H VVG+PALSPTM  G+I +W K  GDEIAAGDVVC++ETDKATVDF+AQD+S +AK LVE G + +PVG PI V V++ D VAAF DF V+A            APV   T P  XXXXXXX     XXXXXXXXXXXXXX     P VT        FKR WG+ V  SPLA +M+ +Q  Y+ KYGSTLQ P+
Sbjct:   39 SALPPHEVVGLPALSPTMEMGTIAEWLKAPGDEIAAGDVVCQIETDKATVDFEAQDESVLAKILVEAGAE-VPVGVPICVMVDEVDDVAAFSDFVVEAXXXXXXXXXXTAAPV--VTAPEPXXXXXXXXXXXXXXXXXXXXXXXXXXADVAPPQVTT---TTYAFKR-WGTKVSTSPLATKMAKDQIEYISKYGSTLQVPI 232
[Close]
BLAST of mRNA_H-paniculata_contig7793.15817.1 vs. uniprot
Match: A0A0P1AE60_PLAHL (Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AE60_PLAHL)

HSP 1 Score: 144 bits (363), Expect = 2.440e-35
Identity = 86/206 (41.75%), Postives = 116/206 (56.31%), Query Frame = 1 
Query:  298 SSLPDHVVVGMPALSPTMTQGSIGKWGKQAGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEEGTQDIPVGTPIFVTVEDADSVAAFKDFTVDAAPTAPPSPAEEPAPV-----EAATPPAXXXXXXXXKVEPVXXXXXXXXXXXXXXXXXXXPPVTAGSAVDMVFKRDWGSGVRGSPLAHRMSAEQKNYVEKYGSTLQTPL 900
            SS P H +VG+P+LSPTM  G++ KW  + GD I AGD+VCE+ETDKA VD++A DD F+AK L+ EGT++IPVG P+ V VED +SVAAFKDF +D A  AP +P     P      E A P          +V P                     PV   SA   VF+  WG G++ S ++  +  +Q+ Y+ +YG T  TP+
Sbjct:   27 SSYPPHDIVGLPSLSPTMETGNMSKWNTKEGDAITAGDIVCEIETDKAVVDYEATDDMFLAKILIPEGTENIPVGQPMMVVVEDQESVAAFKDFKLDEASVAPATPVSSKKPSNKSRSEPAMPQPSQKASPPMEVSP--PTKTIEHTSTVLTNAKASSPV---SATTTVFEEKWGFGIKKSAISTSLLKKQQLYIAQYGVTGMTPV 227
[Close]
BLAST of mRNA_H-paniculata_contig7793.15817.1 vs. uniprot
Match: A0A3R7H1W9_9STRA (Lipoyl-binding domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H1W9_9STRA)

HSP 1 Score: 142 bits (358), Expect = 1.560e-34
Identity = 92/210 (43.81%), Postives = 124/210 (59.05%), Query Frame = 1 
Query:  298 SSLPDHVVVGMPALSPTMTQGSIGKWGKQAGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEEGTQDIPVGTPIFVTVEDADSVAAFKDFTVDAAPTAPPSPA---------EEPAPVEAATP-PAXXXXXXXXKVEPVXXXXXXXXXXXXXXXXXXXPPVTAGSAVDMVFKRDWGSGVRGSPLAHRMSAEQKNYVEKYGSTLQTP 897
            SS P H V+G+P+LSPTM  G++ KW  + GDEI AG +VCE+ETDKA VD++A DD F+AK L+ EG ++IPVG P+ V VE+ +S+AAFKDF V+ AP AP +P          +E  PV+A T  P            PV         XXXXXXXXXX         + VF+  WG G++ S ++  +  +Q+ Y+  YG T  TP
Sbjct:   27 SSFPPHEVIGLPSLSPTMETGNMSKWNLKEGDEITAGSIVCEIETDKAVVDYEATDDMFLAKILIPEGAENIPVGQPMMVVVEEQESIAAFKDFKVEDAPAAPAAPVLSEEEKPPKKEDVPVDAKTQEPVVPQDFLVTSQTPVKTVAGPAIPXXXXXXXXXXXXXAPSPVANAVFEEKWGLGIKKSAISTSLIKKQQAYIALYGVTGMTP 236
[Close]
BLAST of mRNA_H-paniculata_contig7793.15817.1 vs. uniprot
Match: A0A8K1FAL3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FAL3_PYTOL)

HSP 1 Score: 141 bits (356), Expect = 1.670e-34
Identity = 110/223 (49.33%), Postives = 142/223 (63.68%), Query Frame = 1 
Query:  241 TATPTRSAALLPRSSRLFSSSLPDHVVVGMPALSPTMTQGSIGKWGKQAGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEEGTQDIPVGTPIFVTVEDADSVAAFKDFTVDAAPTAPPS---PAEEPAPVEAATPPAXXXXXXXXKVEPVXXXXXXXXXXXXXXXXXXXPPVTAGSAVDMVFKRDWGSGVRGSPLAHRMSAEQKNYVEKYGSTLQTPL 900
            +A+  R +ALL R      +S P H VVG+PALSPTM QG++  W  + GD+I+AGD++C++ETDKA VDF+AQDD F+AK LV EGT++I VG PI VT E+ D VAAFKDF V+A+  A P+   P E+    E A  PA          +  XXXXXXXXXXXXXXXXXXX   TA       F   WG G + SPL+  +  +Q+ Y++ YG T  TP+
Sbjct:    9 SASSARRSALLLRGF----ASYPAHEVVGLPALSPTMEQGNLASWRLKEGDKISAGDIICQIETDKAVVDFEAQDDMFLAKILVPEGTENISVGQPIMVTCEEEDDVAAFKDFKVEASEVAAPAAKAPEEQQPKKEEAKAPAPAATPAPAAAKXXXXXXXXXXXXXXXXXXXXXXXXTA------KFAEKWGHGSKKSPLSFSLVKKQQAYLDLYGLTGTTPV 221
[Close]
BLAST of mRNA_H-paniculata_contig7793.15817.1 vs. uniprot
Match: A0A0W8DVI9_PHYNI (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex n=14 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DVI9_PHYNI)

HSP 1 Score: 140 bits (354), Expect = 2.480e-34
Identity = 90/230 (39.13%), Postives = 127/230 (55.22%), Query Frame = 1 
Query:  241 TATPT--RSAALLPRSSRLFSSSLPDHVVVGMPALSPTMTQGSIGKWGKQAGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEEGTQDIPVGTPIFVTVEDADSVAAFKDFTVDAAPTAPPSPA---------EEPAPVEAATPPAXXXXXXXXKVEPVXXXXXXXXXXXXXXXXXXXPPVTAGSAVDMVFKRDWGSGVRGSPLAHRMSAEQKNYVEKYGSTLQTP 897
            TA P   R AA + RS     SS PDH V+G+P+LSPTM  G++ KW  + GD I+AGD+VCE+ETDKA VD++A DD ++AK L+ EG ++IPVG P+ V V++ +SVAAFKDF ++ AP+AP +PA         +E  PV+A T             EPV                       +      VF+  WG G++ S ++  +  +Q+ Y+  YG T  TP
Sbjct:   10 TALPAQRRIAACVSRSF----SSYPDHEVIGLPSLSPTMETGNMSKWNMKEGDAISAGDIVCEIETDKAVVDYEATDDMYLAKILIPEGAENIPVGQPMMVVVDEEESVAAFKDFKLEDAPSAPAAPALSAEEKPPKKEDVPVDAKT------------HEPVVPQDFL---------------AASAPTSSAVFEEKWGLGIKKSAISTSLIKKQQAYIALYGITGMTP 208
[Close]
BLAST of mRNA_H-paniculata_contig7793.15817.1 vs. uniprot
Match: H3HAP3_PHYRM (Lipoyl-binding domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HAP3_PHYRM)

HSP 1 Score: 139 bits (351), Expect = 6.110e-34
Identity = 90/232 (38.79%), Postives = 124/232 (53.45%), Query Frame = 1 
Query:  247 TPTRSAALLPRSSRLFS------SSLPDHVVVGMPALSPTMTQGSIGKWGKQAGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEEGTQDIPVGTPIFVTVEDADSVAAFKDFTVDAAPTAPPSPA---------EEPAPVEAATPPAXXXXXXXXKVEPVXXXXXXXXXXXXXXXXXXXPPVTAGSAVDMVFKRDWGSGVRGSPLAHRMSAEQKNYVEKYGSTLQTP 897
            T  R  A LP   R+ +      SS P H VVG+P+LSPTM  G++ KW  + GD I+AGD+VCE+ETDKA VD++A DD F+AK L+ EG ++IPVG P+ V VE+ D +AAFKDF ++ AP AP +P          +E  PV+A T             +PV                     +T   A   VF+  WG G++ S ++  +  +Q+ YV  YG T  TP
Sbjct:    4 TAFRLRAALPAQRRVAACAVRSFSSYPTHEVVGLPSLSPTMETGNMSKWNLKEGDAISAGDIVCEIETDKAVVDYEATDDMFLAKILIPEGAENIPVGQPMMVVVEEEDDIAAFKDFKLEDAPAAPTAPVLSSEEKPPKKEDVPVDAKT------------HQPVVPQDF----------------LTTAPAGGAVFEEKWGLGIKKSAISTSLIKKQQAYVALYGITGMTP 207
[Close]
BLAST of mRNA_H-paniculata_contig7793.15817.1 vs. uniprot
Match: A0A1V9YB35_9STRA (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YB35_9STRA)

HSP 1 Score: 139 bits (349), Expect = 2.390e-33
Identity = 89/219 (40.64%), Postives = 115/219 (52.51%), Query Frame = 1 
Query:  307 PDHVVVGMPALSPTMTQGSIGKWGKQAGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEEGTQDIPVGTPIFVTVEDADSVAAFKDFTVDAA--PT-APPSPAEEPAPVEAATPPAXXXXXXXXKVEPVXXXXXXXXXXXXXXXXXXXPPVTAGSAVDMVFK----------------RDWGSGVRGSPLAHRMSAEQKNYVEKYGSTLQTPLEP 906
            P H +VG+PALSPTM QG++ KW  + GD IAAGD++C++ETDKA VD++AQDD F+A+ LV EGT+ I VG PI +TV+DA +V AF DF VDAA  PT AP SP E P   E               V P                     PV A  A     K                  WG G++ SP+++ +   QK Y+  YG+T   P+EP
Sbjct:   23 PSHELVGLPALSPTMEQGNLAKWNMKEGDAIAAGDIICQIETDKAIVDYEAQDDMFLARILVPEGTEGITVGQPIMITVDDAANVGAFADFVVDAAAVPTPAPKSPEEIPPKKEE----VKVDPATNAPVAPADFLVTSQVPQKTVPGPTIPAPVAAPVAATXAPKAAXXXPATTSATLASFEKWGRGIQKSPISNSLLLRQKAYLALYGTTGTFPVEP 237
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7793.15817.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KR44_9PHAE8.910e-6670.09Lipoyl-binding domain-containing protein n=1 Tax=E... [more]
D8LTQ3_ECTSI1.780e-5557.34Lipoyl-binding domain-containing protein n=1 Tax=E... [more]
A0A836CM78_9STRA1.090e-3651.89Putative dihydrolipoyllysineresidue acetyltransfer... [more]
A0A7S2DWD0_9STRA9.890e-3656.72Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A0P1AE60_PLAHL2.440e-3541.75Pyruvate dehydrogenase complex dihydrolipoamide ac... [more]
A0A3R7H1W9_9STRA1.560e-3443.81Lipoyl-binding domain-containing protein n=4 Tax=P... [more]
A0A8K1FAL3_PYTOL1.670e-3449.33Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0W8DVI9_PHYNI2.480e-3439.13Dihydrolipoyllysine-residue acetyltransferase comp... [more]
H3HAP3_PHYRM6.110e-3438.79Lipoyl-binding domain-containing protein n=1 Tax=P... [more]
A0A1V9YB35_9STRA2.390e-3340.64Dihydrolipoyllysine-residue acetyltransferase comp... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7793contigH-paniculata_contig7793:1644..11002 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score203.0
Seed ortholog evalue1.8e-49
Seed eggNOG ortholog2880.D8LTQ3
KEGG rclassRC00004,RC02742,RC02857
KEGG koko:K00627,ko:K13997
KEGG ReactionR00209,R02569
KEGG Pathwayko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00307
Hectar predicted targeting categorymitochondrion
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045254,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204
EggNOG free text desc.dihydrolipoyllysine-residue acetyltransferase activity
EggNOG OGsCOG0508@1,KOG0557@2759
EC2.3.1.12
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01601,ko00000,ko00001,ko00002,ko01000
Exons6
Model size2461
Cds size834
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7793.15817.1prot_H-paniculata_contig7793.15817.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig7793 1719..9440 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930967.9917278-UTR-H-paniculata_contig7793:1643..17181622930967.9917278-UTR-H-paniculata_contig7793:1643..1718Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7793 1644..1718 +
1691481531.5705006-UTR-H-paniculata_contig7793:1643..17181691481531.5705006-UTR-H-paniculata_contig7793:1643..1718Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7793 1644..1718 +
1622930968.1209106-UTR-H-paniculata_contig7793:9440..100681622930968.1209106-UTR-H-paniculata_contig7793:9440..10068Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7793 9441..10068 +
1691481531.636382-UTR-H-paniculata_contig7793:9440..100681691481531.636382-UTR-H-paniculata_contig7793:9440..10068Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7793 9441..10068 +
1622930968.1539645-UTR-H-paniculata_contig7793:10078..110021622930968.1539645-UTR-H-paniculata_contig7793:10078..11002Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7793 10079..11002 +
1691481531.647088-UTR-H-paniculata_contig7793:10078..110021691481531.647088-UTR-H-paniculata_contig7793:10078..11002Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7793 10079..11002 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930968.0152128-CDS-H-paniculata_contig7793:1718..19771622930968.0152128-CDS-H-paniculata_contig7793:1718..1977Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7793 1719..1977 +
1691481531.5843143-CDS-H-paniculata_contig7793:1718..19771691481531.5843143-CDS-H-paniculata_contig7793:1718..1977Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7793 1719..1977 +
1622930968.0424385-CDS-H-paniculata_contig7793:4958..50651622930968.0424385-CDS-H-paniculata_contig7793:4958..5065Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7793 4959..5065 +
1691481531.5948374-CDS-H-paniculata_contig7793:4958..50651691481531.5948374-CDS-H-paniculata_contig7793:4958..5065Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7793 4959..5065 +
1622930968.0672767-CDS-H-paniculata_contig7793:7072..74001622930968.0672767-CDS-H-paniculata_contig7793:7072..7400Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7793 7073..7400 +
1691481531.6048858-CDS-H-paniculata_contig7793:7072..74001691481531.6048858-CDS-H-paniculata_contig7793:7072..7400Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7793 7073..7400 +
1622930968.0883803-CDS-H-paniculata_contig7793:8443..85131622930968.0883803-CDS-H-paniculata_contig7793:8443..8513Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7793 8444..8513 +
1691481531.615043-CDS-H-paniculata_contig7793:8443..85131691481531.615043-CDS-H-paniculata_contig7793:8443..8513Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7793 8444..8513 +
1622930968.1071415-CDS-H-paniculata_contig7793:9370..94401622930968.1071415-CDS-H-paniculata_contig7793:9370..9440Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7793 9371..9440 +
1691481531.625408-CDS-H-paniculata_contig7793:9370..94401691481531.625408-CDS-H-paniculata_contig7793:9370..9440Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7793 9371..9440 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig7793.15817.1

>prot_H-paniculata_contig7793.15817.1 ID=prot_H-paniculata_contig7793.15817.1|Name=mRNA_H-paniculata_contig7793.15817.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=278bp
MHTMPRNSSVVAMRSMVRQAEAAASRSQQRRGLSSSSVGGLVQLRQWRFD
GACSITATPTRSAALLPRSSRLFSSSLPDHVVVGMPALSPTMTQGSIGKW
GKQAGDEIAAGDVVCEVETDKATVDFDAQDDSFMAKHLVEEGTQDIPVGT
PIFVTVEDADSVAAFKDFTVDAAPTAPPSPAEEPAPVEAATPPAPPAAPA
APKVEPVAAPAAPAVAPAAAAAVAAAPPVTAGSAVDMVFKRDWGSGVRGS
PLAHRMSAEQKNYVEKYGSTLQTPLEP*
back to top

mRNA from alignment at H-paniculata_contig7793:1644..11002+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig7793.15817.1 ID=mRNA_H-paniculata_contig7793.15817.1|Name=mRNA_H-paniculata_contig7793.15817.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9359bp|location=Sequence derived from alignment at H-paniculata_contig7793:1644..11002+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAAAAAGATACTAATCATACTCCAAACATCATAGCCTATGCAGAGGCCAT
ACAGGTGGTATCTACAGTCTGGGCAATGCATACAATGCCCCGAAATAGCT
CTGTTGTGGCGATGAGGTCCATGGTTCGGCAGGCTGAGGCTGCGGCTTCT
AGATCTCAGCAAAGAAGAGGGTTATCGTCATCTTCTGTTGGTGGATTGGT
GCAGCTTCGGCAGTGGCGATTTGATGGTGCTTGTTCTATCACTGCAACCC
CAACTCGAAGTGCTGCTCTTTTACCGCGTAGTTCGCGATTGTTCTCATCA
TCGCTGCCTGATCACGTCGTGGTCGGCATGCCAGGTATGTAAATGCTTGC
CGTGGTTTTCGTGGGTCTTTTTTTTTGCGAGGGGGAAGGTGTTGCAGTGT
TGCTATATTGTCCTTAGGGTGCTGACGGGGCTGGTGGTGTGGTGAGCTTG
TTTTGCGATGTGATTTTGCGTCTGGGCGAACTTCTGTCGCTCGTTGTGTT
GTGTGCAAACTGCATTGACTTCACGAACGCGTATCATACTCAGATCATAC
GCTGTACCTGGCGTGCTGTAGTTGTGTGCAATAGTTTCATCTGTGTGAAA
GGCACACTAACTGCACCGCTTTGGTGCGTATCTCGTGAGTGATTCAAGCA
TTTTTCAAGGTCAATCGAGCACAACATACTGGGCAACAAATGGTGGGCCA
TGCATGTTCAAGCGTTCATCGTTTCACGTACCTATACAGAATGTTCTCCC
CAGACGGAGGTTCTCCTACAACGGCAAGACAGATGGATTCAAACATGGGC
CAATCTTTTATTGCTGCAGCCGATAGACCCATCCCATCTGCCACAATTCT
GTCCGATACACCGAGGCATTTGCCCATGACATGTGCTTGCCGGCTGCCGC
TGGCAATGAGCTATCGATACAGACGGTTGCAGCAGCTCAATAATTTTCCA
CTTCAGCGGGGCCTTCACTGGCATACCGTGCCGTGCTGCTCTACCTGGCT
CATCTGTAAGTATGGGATACCGTAATACTCTTTTGATATCGCACCCCATG
ATACTATTTTCCAGTCCCGAGTTTTACAAGAAGCAAGAGCCTGGACTGCC
GAATCAGCAGAAGGATCTCAACGAGATCTTTCCAATGAGAACGCTATCGA
TGTCGTGGGCACCGTTGTTGTCCATGAAAATCGAGTTTGAAAAGTAATGT
CAGGGGGCACGGTGTCACCAAGGGTTTAGATGAATCTTTTGTACTTTTAC
ATGCAAGACACCTAAATACCATCACTTGCTATAGCCCACCGTCCTCGTTA
TTTTTATCATGCGGTAACTGCACTCCCCGGATGGACACAAATACTTGGAT
GGGATCATTCGCAACGAATATTAAAACGTATGTTCGCCTGAAGGTTGAGC
ATGAGCATCACTGGAAGTCTAGTCAGAGGTCTTTTGGTGGGTGCAACCCC
CAGACTACCGACTTGGTTCGGCCCAACCGCGGTGGCGCCTACCCCGCAGA
GGAATAAATAACTGTATTCTGTTAAAGGAAATGTAGAAATACTTTGGTAA
ATTACTCAAGTATCGAAGTATCGGATAAAGGTTTTTGCCTTAGCCTTCCG
GAGGTTAAAAAAAAGAAAAAAAAAAGAGCAGCACTTCATTTTGAGTGCCC
GCACAATTCTGAACATTCCGGCGAATACTTAGGAAAAAAATCAAAGCATA
ACATCATTAGTGAAACGTGTGACAGAAGGAGAAGTGCAAATCAATTAAGG
TTCAACCATTCTCATCGGTTTTACAGTATTTTGGGCTCATTTATAGTATA
CACCCATCTCCTGGGACTGTAGTGGGTGTGTTGTTTCGCGGATGAATTGA
TTGGAAGCGGGGACACAACTTCCACACACACACTTTGGATAATGGGATGT
TGATTCTAGGAGATGGAAAGTGGCCTGATAAGGCGAAGAGGGAGGGTTGA
GGTGGATAAGATAGGTGACAGATGAGATCCTTGCACCCCTCTGACAAATA
CGAGGATAAGACACGAATAAATACATATAAATCTAGAAATCAATAGTTGT
ATCTGTTTGAATTGGGGAAGATGTCCGTGTCATGCTAATAATATTTAGTG
TACTCAATATAGCATGGAGCATAGAAAAGCTCGGGCAGTTTGAATATTCA
AAATGTACAGTACCATCCCGAAAATAAACAGGGTCTGCACGTGTGACTGT
TCACCGGGTATACGACCACCTGGTGACCGTCTGTAGAGTGACCGTTCATA
GACTTGTAAGCGAATAAATACGTGTTTAGGCGAGACAAATAATGATAGTT
CGAGAGTAGTTGCAAATGCTCCGTTCGTCATCGTCCAGGGGGTGGACCCT
TTCAAGTCACATTTAGCAATGTAGGAAAGAGCCATCAATGATCGAATATC
ACTTTTATCGGAATGAGCTCTGTCCTCTTGAGGATACCTGGTCAATGGTG
TTGAAACTACGAGATTCAGAGCCTGAGTGTATCCTCCCCGAAGGTTGGTC
AATTTGTCTGTAAATAAATGGTTTAAGCAGTGTTGAAAGAACTGGGCATA
CAGTACATCCGCTCTTTTACGGTAAATCATGCTATGTTCTCCTCTTTCTT
CACAGTCTTGAAATTTTCGCTGTCTTCCAAAATAATTTTCCCCACGGTGT
AGAAGATGCCATGCCGTGCTGCTGGTGAGGCTGTCGTTTTGCAATTGCTG
CGTGTGGTGGTTCCGCCATCCCTAGTCACTCTGTAGAGATAATGTTATTC
TTGCACGAAGTAGTTAACTTGTTCCTTGAGAACTGCACCCCTGTCCCCCT
CCCTGTCCCCCCCCCCGCGCGCGCACTCCGTAGCTTGTTCAACTTGTAGA
GGATAGTGACGTAAACCAGAAACCTGAACGTGCTTCAGCATGTGTACCTT
CCTTTCGTTTTACTCTGGTTGTCCATGTTTTTTGCATCGCGTAATTACTT
CTCTTTTCCCACGTTGGACTCGTTTTTGTTCTATGGGTACTGCTCCCTTC
CCCCCCCCCCCCCCTCCCTCGCACAGCCGTGGGACTTAAGTCGTCCTCTA
TGAAGTGTCGGTGCCTTATTTGCGGGTCATTTCCTTTGAAAGGTACCTTT
TTTTCGTGGCTACCGTGACATCTTATGTAGAGCCGCACTCGGTCTACGAA
CGTCATCGAGGTACTAGCCGTGTCAAGTGCACCAAGTCATGAATGCAGCT
TGGTGGATTACTTTTATCGGTTGTTAATTTGATTCCATTGAAAAATATGT
GCAATCGACGTCCGAATCCCCCCCCCCGTCTCCCTTGCCCGCACAACTCC
GCTCCGATTCCCAAGCTCTGTCGCCGACGATGACGCAAGGGAGTATAGGA
AAATGGGGCAAGCAAGCCGGCGATGAGATCGCGGCAGGGGACGTGGTTTG
TGAAGTAGAGACGGATAAGGCGGTGAGAGAGAGACAGAGACAGAGACAGA
GCTTCGCCAGCACTATTTTACTTTCCCATCATGGTGGATCGTGGCGTGTT
GCCGAGATCTTGAAACTTTGTGGCACCGCATCCTGAAAGAAATTACAAAA
ATAGTCTGACAATCCCGCGGCGAAATTGCTGCGAAAAGGGTCGGGGCGGG
GGGGGGGGGGGGGGGGGAGTCCAAAACAAACATAAGTGTGACTTAAGAAC
GGATCTCGCGGCCTTGACTCATTTACCTCCGCGGAGGCGTTGAGTGTGTA
TGTTCATAGTTTCGTCTAGGGCACCATAATTAGGCATGGATTGTATAGGG
ATTGTACAAGGTCTGGTGTGTGTCACAGGGGTTAATAAGACAGCACCTAC
TTGGTTCGGCCGAACCGGGGTGGCGCCTACCCCGCAGAGGAATAAATAAC
TCTGTTCTGTTGAAGAAAATGTAGACATACTTGGGTGAATACCTGAACGT
GGAAGCAGCGGAAAAGGTTTTTGCCTCAGCCTTCCGGGGGTTAAAATAAA
AGAATAAATAAACTAATAAGACAGCACAGCAGAAGAAATCCGACATCTTC
GCAACTAATATACGTTCAGCGTAATGACCGCCATTAGGGATCGAGGAGAT
TTAGGTTAAAAGCGTTCTGTAATACTTTCGATTACGGGCCGTGATGTGCA
ATGGAATATACCCCGTGGAGGCCGTTACCAAATTTTCTTTTCCTCCAACA
CGCCGAGATTAGGTTGGAAGAATCAGAGAAATTCGAAAATGGAGTTTATT
TTCAAAGGAAGATCGTACAAGTAGGCAAATATTGCCTTTTTGGTTCAATT
TTATTTCCGAAATGTGAGGAAAAATTTAGCAGAAAAGATAATGAAATGGA
GAAAACGAATAGAAGAAAGGGAGGGAAATCGGAAGAGAAACACCGACGTT
AGTTTCGAACCGATGGGTCATTACTAACTAGCACGTGGAGGCGTTCGAGA
AATTTGACATGTTCAAGCCATCACTAAAGAGTCAAATTTTATCCCAAAAA
TTGTCGCGAGGCATCATTTTTGTCAAGCATATCTGCAAATCTAAATAAAA
ACACGTTTTCTGTAGTTTACTTTGGCTGTTGATGATTTGTACTTGTGAAA
TTTCACAAGTTTCACGAATTTCTCCTCCGCTTGAAATTACCCTAAGCAGT
ACTGTCGTCGTACATTTTCAGCTCGTGTTTGCGGACCCTTTTAACTGTGG
TCCGTTTTCTGTCTTGAGAATAGAACAAGTTGAAACAAATTGTATGTTGA
TTTTATGAAAGCGTTGGCAAAAATTATCATCTGCTCAAAGAGGACCGTTC
TCACGAACGGTCCGTTTGTAATGGCTTTTCTTCCCAGAATTTTGTCAGAG
CATTAGACATCGTGAAAGATGCTCAATTACAAAATACAACAGATTAGATG
AGAGCATCTGATGATGAAAAACAAAGCCCATCGTTTTTTATTTTGTTTTT
CTTATGTGAGGGGTGTGTGCGATATATGTTCTTTATTCGCATGTCGTTAA
TGTTGAAGGAAGCAAAGTGTCTCTATTTTTCATCCAGTTGCTAATGCTAT
TTGACGATAAGAATGATGTCAACCATGAGTGAAAGACGACTCGCTCGCGG
TGAAAGGGTTGAACTCATAGTTATGAACCACGTGTTGACGAACTACCGGT
GAGTAATAAGGCCACGGATACGCTCGTGGATTCCATGGTTAGCTGTAGTC
CATGACCCCAGTGGCAACGGATCGCTGCGTTCGTACTGAGATTCGTTTTT
CGAAATTTACTCTAGGATTCATGTATTCTTACAGAGTTGACCTGTTTCGA
TGAAACCCTGAGGATGACAATCTTACTGTGTTAGAAAATAACAATGTTCA
TTTTGCTTTGCTAACGATTCAATACTATCTCACCCTATTCCTCTTTCTAT
CTCTCACTCTCTCCGTTTTTCTCCATTTGTAAACCTGCCACCGTGTACTC
GGTTGTGAACGGCGTTAATTCACTACTAGACCGTCGATTTCGATGCCCAA
GATGACTCCTTCATGGCCAAGCACCTCGTCGAGGAGGGTACCCAGGACAT
CCCCGTGGGTACCCCCATTTTCGTCACCGTCGAGGACGCCGACTCCGTCG
CCGCCTTCAAAGACTTCACCGTGGATGCGGCTCCCACCGCACCCCCGTCC
CCAGCTGAAGAACCGGCGCCGGTTGAAGCGGCAACGCCGCCAGCCCCACC
TGCGGCTCCTGCGGCGCCCAAGGTGGAGCCTGTGGCAGCACCGGCTGCAC
CAGCCGTAGCACCTGCTGCCGCTGCGGCGGTGGCGGCAGCGCCGCCAGTG
ACAGCGGGTAAGGTTGGGCTGTTGGCGTTAGAATGTCCGGGAGGGGGGGA
GTACCATAGTGTAAAGAAATCAAAATTACAAGCAGAGATGCACGAATTAC
CGTTTTGTAGACAAGATGACTATAACCAAACCGTAGACCAAAATGGAGGT
GGAGTATATTCCATCATTTTCAAGCTGCTGGACTACTTTTTCATAAACTG
GAAGCAAGGGGGAGGTGGAGGGGGGAAGGGAGGGTTTTTGTGTTTTTTTT
GCTTATCGGTAGTTGCTGATCAGGTCATTGACCGCGCGTTGTCCGGAGGG
CGGAGCTTTGTTCCGTTCAGAGAGATATCCGATGATGGGTCAATTGGTCG
TTTCTGCGTTGCATAAATATTGTGAACCAATGCGTGGGAGGATCTGATGA
TTTTAGTCGATTAGGGTCATGTTACAAATTTAGCATGCGACGCCTTGAGT
GGAAGTGATGAAAGCTGGAGAGTTGGAGTGTGAGAGGACGTGAACAGGAC
TGAAATTGCCCCGGCCCGTTCTGGCCCTTCATGAGTTTAAGATAAAATCA
CCCCGAACGGCAAGGAAACGACGTCCATGTTCAGGTGAAGATGGACGTGT
CAGTTATTTACAGCTAGTTCAATACTATGTCGATCTGTTCGTTGCTACTG
TCGATTGGTGGTTTGTGTATATACCCTTTGACCATAACGGAGTCTGATTC
CTGAAAGGGTTAAATGTTTTACCTCCCAAGCAAATACGAATACTTGCAAA
TGCTTTCAACATAAAAGTAAAGTATTCGCCTGAGTTTCTAAATGAGTTAG
TGTGTTATATGTGCCTGGGACCATTAACCACTGCTAATATTAACTCGCGA
ATCGAATGAACAGGGATGGGTACCTTATTCTATGTGTCCACTCATTCTGA
AACTATGCGAATGTTTTCAGTTTTTTCTTGAAATCATCTGCCAGTACTGG
TATTTGTCTGGGAGGTGAATTATTTCATACGTGTTTGTTTACGTGAAAGA
CATGTCAGGGGTTTGTTCCCTACGTCACTGCTTTTGTGTACATAATTCAG
GCTCGGCCGTGGACATGGTTTTCAAGAGGGACTGGGGAAGCGGAGTTCGC
GGCAGCCCGTTAGCGCACAGGTGAGTAAAGTTTTACATGGAAGCGATAAA
TCTCTAGTACCACGGGGGATCTGTTTATCTCAACAAACTCTGACTATATG
TGTCCTCACTTTGTGTGAGGAGCGACAAATCTTCATTCTCGAAGGGAACT
AGTAACCTAAATCATTCCTGAGTAATGCGGTCGAATCTTGGTACGATAGC
GGTCTCTCACAGCGTATGCTGTTGAGGGATGACTAAATTATTGGTTTTAC
GCAAGTTCAGACATTTACGGAGCTCGGAACCTTGTGGACACATCAAGGAG
TTGTCCAAGGTTGGAGATGCTCTAACGTGGTAGATATCACACTACTGTCC
CCTTTGCACAGATTTGAGATTTTGTGACCGTCGGTGGGCGTGTATGGGAC
AGGTCTGATTCTCCTGATGAAGATTTTTTTTTTTTTTTTCTGTCCTTGAA
TCGAGGATCCCGTTTGCTGACGGGTTCTCGTGATGTACTTACAAGGAAAA
TCACCAGACCCCCCCCCCCTACTTCGTCCCTGATTGCACGGCGACGCAAA
TCATTGCTACGAATAACTGATGAGTTCAAACAGATCCCTTGTGCCATATA
TACAAATATTAGCAGCGCGCAAGGAACGCGCATTGGGCATGATGGACAAG
GAGCACGAAATATGATGTTGTAAAATGGTTGCGTTTCGGGGGTGGGTCGC
CATTTTTTTTCTTGTTTTTGGTGGAAGGGGAAAACGATGAATCGAATATA
AACACAAAACGTTTTTGCGCGCGTCATTTGGTACATAAGAAAAAAGCGAC
CGCGAAGTCCGTGTTTCATGACCTCGCCCCTTCTTTATTGCACTCTGATT
TTCTCATCCAAACGTTTGTGGTGGCAGGATGTCAGCAGAGCAGAAGAATT
ATGTCGAGAAATATGGGTCTACGCTTCAAACGCCCCTGGAGCCGTGAGCA
TTTTTATTTCCTTATAGACCTTGTGTTCGAGAGATTTTAGGGATGATACC
AGGAAGTGGGTGGAAGGGATTTTTTTTTTTTTTTGCTACCTTCCTGTGGG
TCGAGCAACTACCATGTGTTGTGTCTCTTCCTGCGTGTTTCGGTGCTGCT
ATCAATCACAGAACGCTGTGTGGTATTGGGTGAAGGTCATGGCAAATAGC
GGTGGATATCACGCAAGACGCCGAGTGTAGTGAGGCTTCTACCTCATGTG
TGATTGTGGAGCGTATTGACGTCGTAGGATGGTTGATTAGTGCAGCCTGT
TCAGGGGGTATCTTGTGCACCGCGTGTCTGTTTGGAGTGTTGGGGCTCTC
TATAATATCGCAGTTTGGTCAGGTAAGATTTTTTTTTTTTTTTTTGCTGC
TCTAAGGTATTTAGTGGTATTCGATTAGTCAGTGAATAGTTTTATTTTAT
TTTTTTTCCGCAAATGGCCTATTTTTCACGTCCCCTCGTTTTTTAGTGGT
TGATTCTATTCTGTTGTTTCATAAAGGTTTGGATGCGCCATTCTTTTACG
GATTTCGAACCTAAAATCCTTACCTGTGAAACATGAAGAAAGAACTCTGA
CTGTGCAATATTAATATTCATAAATGTAATACTAGTTTCGTATATTGATC
AGTAGCGGAGATCCCACGAGGAGATCGGAATTGCGGATGAACCTGTGCAA
ATATCGTATATATCAGGTCTTCCGCAGGTCACGAAGCCTACTGTCGTGTA
ACTTGCCTATTATCGTGGTGGGAAAATGGAGGAAGGCACTAAGCAACGGA
AACAGATGCCTTTGACTTAAAACAAACTTCCCAAACTAATAGTGCCTTTC
CGAGAATTAGAAAAATAAGCAATAATGAGAAGACGGGACTTCTTTGGCGG
AACTTTGTCTCTTGTGATGGCCTTGGTTCTTTTCCGTGCTGTGATAGTAA
TGTGTGATGATCCCAGCCGACTATGATTGCCGGATTTTGAGTGGGGTCTG
CTGTAATAAGAAGGATGTGCATCACAGTCAAAGCTAAAGGGAGAAAATAG
ATTAATTCGCTCCCTAGGTACGTCGCGTTGTAGGATGTTCTCAGTTCTAC
GACGACCCACGTTGCTATTCACAGGTTCTTTTCCTTTTGTGATTGCTTCC
ATGATGACACGCGATATCCTCTCGTTTCGGAACTCTGAACTTGTCCCGTC
CGAATGGTTACCGCCTCTACGTGGCAGATGGAATCAACTCATCCCGGAGT
AACTCCCTAACCCTAACCCAATTCACCCCGGGCTAAACCCTAGGTTGATG
GCGGTGAGGCCAAGACACCGTCCAAGACCACCGGCAGGCTTAAAGTTGCA
TAGGTCTCGTAGGTTTTGGCGAACCAGAAATCACTAAGGAAAGAGTAAGA
AAACGACCACGCTATGAGGGTATGAGTGAGCCCTGTGGACAAAGACGGCA
AGGTTTGGGACGGGAGACAAGTCACTTCTCCTAAGTGGGGAGGTTGTGCG
GTTCGACTGCCGGAGCGCCCCACTCCGGCAAAAAAAGAACCCCGATCTGG
TAGCCGTTC
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig7793:1644..11002+

>mRNA_H-paniculata_contig7793.15817.1 ID=mRNA_H-paniculata_contig7793.15817.1|Name=mRNA_H-paniculata_contig7793.15817.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1668bp|location=Sequence derived from alignment at H-paniculata_contig7793:1644..11002+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCATACAATGCCCCGAAATAGCTCTGTTGTGGCGATGAGGTCCATGGT
TCGGCAGGCTGAGGCTGCGGCTTCTAGATCTCAGCAAAGAAGAGGGTTAT
CGTCATCTTCTGTTGGTGGATTGGTGCAGCTTCGGCAGTGGCGATTTGAT
GGTGCTTGTTCTATCACTGCAACCCCAACTCGAAGTGCTGCTCTTTTACC
GCGTAGTTCGCGATTGTTCTCATCATCGCTGCCTGATCACGTCGTGGTCG
GCATGCCAGATGCATACAATGCCCCGAAATAGCTCTGTTGTGGCGATGAG
GTCCATGGTTCGGCAGGCTGAGGCTGCGGCTTCTAGATCTCAGCAAAGAA
GAGGGTTATCGTCATCTTCTGTTGGTGGATTGGTGCAGCTTCGGCAGTGG
CGATTTGATGGTGCTTGTTCTATCACTGCAACCCCAACTCGAAGTGCTGC
TCTTTTACCGCGTAGTTCGCGATTGTTCTCATCATCGCTGCCTGATCACG
TCGTGGTCGGCATGCCAGCTCTGTCGCCGACGATGACGCAAGGGAGTATA
GGAAAATGGGGCAAGCAAGCCGGCGATGAGATCGCGGCAGGGGACGTGGT
TTGTGAAGTAGAGACGGATAAGGCGCTCTGTCGCCGACGATGACGCAAGG
GAGTATAGGAAAATGGGGCAAGCAAGCCGGCGATGAGATCGCGGCAGGGG
ACGTGGTTTGTGAAGTAGAGACGGATAAGGCGACCGTCGATTTCGATGCC
CAAGATGACTCCTTCATGGCCAAGCACCTCGTCGAGGAGGGTACCCAGGA
CATCCCCGTGGGTACCCCCATTTTCGTCACCGTCGAGGACGCCGACTCCG
TCGCCGCCTTCAAAGACTTCACCGTGGATGCGGCTCCCACCGCACCCCCG
TCCCCAGCTGAAGAACCGGCGCCGGTTGAAGCGGCAACGCCGCCAGCCCC
ACCTGCGGCTCCTGCGGCGCCCAAGGTGGAGCCTGTGGCAGCACCGGCTG
CACCAGCCGTAGCACCTGCTGCCGCTGCGGCGGTGGCGGCAGCGCCGCCA
GTGACAGCGGACCGTCGATTTCGATGCCCAAGATGACTCCTTCATGGCCA
AGCACCTCGTCGAGGAGGGTACCCAGGACATCCCCGTGGGTACCCCCATT
TTCGTCACCGTCGAGGACGCCGACTCCGTCGCCGCCTTCAAAGACTTCAC
CGTGGATGCGGCTCCCACCGCACCCCCGTCCCCAGCTGAAGAACCGGCGC
CGGTTGAAGCGGCAACGCCGCCAGCCCCACCTGCGGCTCCTGCGGCGCCC
AAGGTGGAGCCTGTGGCAGCACCGGCTGCACCAGCCGTAGCACCTGCTGC
CGCTGCGGCGGTGGCGGCAGCGCCGCCAGTGACAGCGGGCTCGGCCGTGG
ACATGGTTTTCAAGAGGGACTGGGGAAGCGGAGTTCGCGGCAGCCCGTTA
GCGCACAGGCTCGGCCGTGGACATGGTTTTCAAGAGGGACTGGGGAAGCG
GAGTTCGCGGCAGCCCGTTAGCGCACAGGATGTCAGCAGAGCAGAAGAAT
TATGTCGAGAAATATGGGTCTACGCTTCAAACGCCCCTGGAGCCGTGAGA
TGTCAGCAGAGCAGAAGAATTATGTCGAGAAATATGGGTCTACGCTTCAA
ACGCCCCTGGAGCCGTGA
back to top