mRNA_H-paniculata_contig77592.15794.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig77592.15794.1 vs. uniprot
Match: A0A6A3BY51_HIBSY (Histone acetyltransferase n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3BY51_HIBSY) HSP 1 Score: 64.7 bits (156), Expect = 2.150e-10 Identity = 37/76 (48.68%), Postives = 51/76 (67.11%), Query Frame = 1
Query: 1 ACEKGKASKQSVKRYREKRTTEPLELVHADIAGPVD-KSLGGCRFAIIFVNDYSRMRKVYTSRKKSEALWALKKFE 225
AC KGK +QS + R R PLE+VH DIAGP D SLGG R+ + F++D+SR +Y ++KSEAL L++F+
Sbjct: 366 ACIKGKQHRQSFEVGRSWRARRPLEIVHTDIAGPFDIPSLGGNRYYLTFIDDFSRKCWIYILKEKSEALEKLREFK 441
BLAST of mRNA_H-paniculata_contig77592.15794.1 vs. uniprot
Match: A0A068B703_GOSBA (Polyprotein n=5 Tax=Gossypium TaxID=3633 RepID=A0A068B703_GOSBA) HSP 1 Score: 64.3 bits (155), Expect = 2.920e-10 Identity = 36/76 (47.37%), Postives = 50/76 (65.79%), Query Frame = 1
Query: 1 ACEKGKASKQSVKRYREKRTTEPLELVHADIAGPVD-KSLGGCRFAIIFVNDYSRMRKVYTSRKKSEALWALKKFE 225
AC KGK +Q + + +R PLE+VH DI+GP D +SLGG R+ + F++DYSR VY + KSEAL K+F+
Sbjct: 521 ACVKGKQHRQKFEVGKSRRARRPLEIVHTDISGPYDIESLGGNRYYLTFIDDYSRKCWVYFLKAKSEALEKFKEFK 596
BLAST of mRNA_H-paniculata_contig77592.15794.1 vs. uniprot
Match: A0A2G2VUS6_CAPBA (Integrase catalytic domain-containing protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2VUS6_CAPBA) HSP 1 Score: 64.3 bits (155), Expect = 2.920e-10 Identity = 35/76 (46.05%), Postives = 52/76 (68.42%), Query Frame = 1
Query: 1 ACEKGKASKQSVKRYREKRTTEPLELVHADIAGPVD-KSLGGCRFAIIFVNDYSRMRKVYTSRKKSEALWALKKFE 225
AC KGK +QS + + +R +PLE+VH+D+AGP D SLGG R+ + F++D+SR VY ++KSE L K+F+
Sbjct: 820 ACIKGKQHRQSFEVGKSRRARKPLEIVHSDLAGPFDIPSLGGNRYYLTFIDDFSRRSWVYILKEKSETLDKFKEFK 895
BLAST of mRNA_H-paniculata_contig77592.15794.1 vs. uniprot
Match: A0A6A2WSU7_HIBSY (Integrase catalytic domain-containing protein n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WSU7_HIBSY) HSP 1 Score: 63.9 bits (154), Expect = 3.980e-10 Identity = 38/76 (50.00%), Postives = 50/76 (65.79%), Query Frame = 1
Query: 1 ACEKGKASKQSVKRYREKRTTEPLELVHADIAGPVD-KSLGGCRFAIIFVNDYSRMRKVYTSRKKSEALWALKKFE 225
AC KGK +QS K R R LE+VH DIAGP D SLGG R+ + F++D+SR +Y ++KSEAL LK+F+
Sbjct: 367 ACIKGKQHRQSFKVGRSGRAQRLLEIVHTDIAGPFDIPSLGGNRYYLTFIDDFSRKCWIYILKEKSEALEKLKEFK 442
BLAST of mRNA_H-paniculata_contig77592.15794.1 vs. uniprot
Match: A0A2Z7BCE9_9LAMI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7BCE9_9LAMI) HSP 1 Score: 63.2 bits (152), Expect = 7.310e-10 Identity = 37/75 (49.33%), Postives = 50/75 (66.67%), Query Frame = 1
Query: 4 CEKGKASKQSVKRYREKRTTEPLELVHADIAGPV-DKSLGGCRFAIIFVNDYSRMRKVYTSRKKSEALWALKKFE 225
C GK SK+S + R TEPLELVHAD+ GP+ ++LGG ++ ++FV+DYSRM VY + KSEA KF+
Sbjct: 327 CMYGKQSKRSFPVGQSWRATEPLELVHADLCGPMRTETLGGSKYFLLFVDDYSRMSWVYFLKFKSEAFGQFFKFK 401
BLAST of mRNA_H-paniculata_contig77592.15794.1 vs. uniprot
Match: A0A2Z7AAL1_9LAMI (CCHC-type domain-containing protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7AAL1_9LAMI) HSP 1 Score: 62.0 bits (149), Expect = 1.790e-9 Identity = 36/75 (48.00%), Postives = 50/75 (66.67%), Query Frame = 1
Query: 4 CEKGKASKQSVKRYREKRTTEPLELVHADIAGPV-DKSLGGCRFAIIFVNDYSRMRKVYTSRKKSEALWALKKFE 225
C GK SK+S + R TEPLELVHAD+ GP+ ++LGG ++ ++FV+DYS+M VY + KSEA KF+
Sbjct: 327 CIYGKQSKRSFPVGQSWRATEPLELVHADLCGPMRTETLGGSKYFLLFVDDYSKMSWVYFLKFKSEAFGQFVKFK 401
BLAST of mRNA_H-paniculata_contig77592.15794.1 vs. uniprot
Match: A0A0S7KIZ2_9TELE (POLX (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7KIZ2_9TELE) HSP 1 Score: 61.2 bits (147), Expect = 1.930e-9 Identity = 32/77 (41.56%), Postives = 50/77 (64.94%), Query Frame = 1
Query: 1 ACEKGKASKQSVKRYREKRTTEPLELVHADIAGPVD-KSLGGCRFAIIFVNDYSRMRKVYTSRKKSEALWALKKFER 228
AC GK ++Q K E R+ L+L+H+D+ GP+ +S+GG ++ + F++D+SR KVY + KSE L K+FER
Sbjct: 90 ACVDGKLTRQPCKAVGEIRSKRKLQLIHSDVCGPMQTESIGGSKYFVTFIDDFSRCCKVYFMKHKSEVLSKFKEFER 166
BLAST of mRNA_H-paniculata_contig77592.15794.1 vs. uniprot
Match: A0A0S7KIW8_9TELE (POLX (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7KIW8_9TELE) HSP 1 Score: 61.2 bits (147), Expect = 3.470e-9 Identity = 32/77 (41.56%), Postives = 50/77 (64.94%), Query Frame = 1
Query: 1 ACEKGKASKQSVKRYREKRTTEPLELVHADIAGPVD-KSLGGCRFAIIFVNDYSRMRKVYTSRKKSEALWALKKFER 228
AC GK ++Q K E R+ L+L+H+D+ GP+ +S+GG ++ + F++D+SR KVY + KSE L K+FER
Sbjct: 461 ACVDGKLTRQPCKAVGEIRSKRKLQLIHSDVCGPMQTESIGGSKYFVTFIDDFSRCCKVYFMKHKSEVLSKFKEFER 537
BLAST of mRNA_H-paniculata_contig77592.15794.1 vs. uniprot
Match: A0A251SFL5_HELAN (Putative ribonuclease H-like domain-containing protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251SFL5_HELAN) HSP 1 Score: 61.2 bits (147), Expect = 3.540e-9 Identity = 33/74 (44.59%), Postives = 49/74 (66.22%), Query Frame = 1
Query: 4 CEKGKASKQSVKRYREKRTTEPLELVHADIAGPV-DKSLGGCRFAIIFVNDYSRMRKVYTSRKKSEALWALKKF 222
C GK +++ + + TEPL+LVH+DI GP+ +S+GGCR+ I F++DY+R VY + KSEAL+ K F
Sbjct: 484 CISGKHARKPFHKKMVWQATEPLQLVHSDICGPMRTESIGGCRYFITFIDDYTRKTWVYFLKFKSEALYHFKNF 557
BLAST of mRNA_H-paniculata_contig77592.15794.1 vs. uniprot
Match: A0A251SFG3_HELAN (Putative ribonuclease H-like domain-containing protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251SFG3_HELAN) HSP 1 Score: 61.2 bits (147), Expect = 3.560e-9 Identity = 33/74 (44.59%), Postives = 49/74 (66.22%), Query Frame = 1
Query: 4 CEKGKASKQSVKRYREKRTTEPLELVHADIAGPV-DKSLGGCRFAIIFVNDYSRMRKVYTSRKKSEALWALKKF 222
C GK +++ + + TEPL+LVH+DI GP+ +S+GGCR+ I F++DY+R VY + KSEAL+ K F
Sbjct: 729 CISGKHARKPFHKKMVWQATEPLQLVHSDICGPMRTESIGGCRYFITFIDDYTRKTWVYFLKFKSEALYHFKNF 802 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig77592.15794.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig77592.15794.1 >prot_H-paniculata_contig77592.15794.1 ID=prot_H-paniculata_contig77592.15794.1|Name=mRNA_H-paniculata_contig77592.15794.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=76bp ACEKGKASKQSVKRYREKRTTEPLELVHADIAGPVDKSLGGCRFAIIFVNback to top mRNA from alignment at H-paniculata_contig77592:149..376+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig77592.15794.1 ID=mRNA_H-paniculata_contig77592.15794.1|Name=mRNA_H-paniculata_contig77592.15794.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=228bp|location=Sequence derived from alignment at H-paniculata_contig77592:149..376+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig77592:149..376+ >mRNA_H-paniculata_contig77592.15794.1 ID=mRNA_H-paniculata_contig77592.15794.1|Name=mRNA_H-paniculata_contig77592.15794.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=456bp|location=Sequence derived from alignment at H-paniculata_contig77592:149..376+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |