|
|
Homology
BLAST of mRNA_H-paniculata_contig7742.15764.1 vs. uniprot
Match: D7G5G8_ECTSI (SPG1, Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G8_ECTSI) HSP 1 Score: 176 bits (446), Expect = 2.090e-47 Identity = 86/95 (90.53%), Postives = 94/95 (98.95%), Query Frame = 3
Query: 3 VRGLNRTAHAFLVGTKYDLYTSMPAEEQREIDKQARKFAKAMHAPLIFTSASHSINVQKMFKVVLSKVFDLRCNLEEITGAGEPLLLFSKDENES 287
VRGLNR+A+AFLVGTKYDLYTSMPAEEQR+IDKQARKFAKAMHAPLIFTSASHSINVQKMFKVVLS+VFDLRCNL+EI+GAGEPLLLFSK+E E+
Sbjct: 113 VRGLNRSAYAFLVGTKYDLYTSMPAEEQRDIDKQARKFAKAMHAPLIFTSASHSINVQKMFKVVLSRVFDLRCNLDEISGAGEPLLLFSKEEGEA 207
BLAST of mRNA_H-paniculata_contig7742.15764.1 vs. uniprot
Match: A0A835YI98_9STRA (SPG1, ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI98_9STRA) HSP 1 Score: 152 bits (385), Expect = 8.850e-39 Identity = 73/89 (82.02%), Postives = 81/89 (91.01%), Query Frame = 3
Query: 3 VRGLNRTAHAFLVGTKYDLYTSMPAEEQREIDKQARKFAKAMHAPLIFTSASHSINVQKMFKVVLSKVFDLRCNLEEITGAGEPLLLFS 269
VRGLNR AHAFLVGTKYD++ ++P EEQ++IDK ARKFA AMHAPLIFTSASHSINVQKMFKVVLSKVFDLRCNLE+I GEPLLLF+
Sbjct: 113 VRGLNRNAHAFLVGTKYDIFATLPTEEQQDIDKMARKFAAAMHAPLIFTSASHSINVQKMFKVVLSKVFDLRCNLEQIENVGEPLLLFT 201
BLAST of mRNA_H-paniculata_contig7742.15764.1 vs. uniprot
Match: A0A6V1K250_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1K250_HETAK) HSP 1 Score: 139 bits (349), Expect = 3.250e-34 Identity = 66/88 (75.00%), Postives = 77/88 (87.50%), Query Frame = 3
Query: 6 RGLNRTAHAFLVGTKYDLYTSMPAEEQREIDKQARKFAKAMHAPLIFTSASHSINVQKMFKVVLSKVFDLRCNLEEITGAGEPLLLFS 269
RGLNR AHAFLVGTKYD++T++ EEQ EIDKQARKFAKAM APL+FTS+ HSINVQKMFK+VLS+VF+LRC L+ I GEPLLLF+
Sbjct: 112 RGLNRNAHAFLVGTKYDIFTTLSPEEQAEIDKQARKFAKAMKAPLVFTSSPHSINVQKMFKLVLSRVFELRCTLQPIKNVGEPLLLFT 199
BLAST of mRNA_H-paniculata_contig7742.15764.1 vs. uniprot
Match: A0A7S3H350_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H350_9STRA) HSP 1 Score: 134 bits (337), Expect = 1.880e-33 Identity = 64/87 (73.56%), Postives = 76/87 (87.36%), Query Frame = 3
Query: 6 RGLNRTAHAFLVGTKYDLYTSMPAEEQREIDKQARKFAKAMHAPLIFTSASHSINVQKMFKVVLSKVFDLRCNLEEITGAGEPLLLF 266
RGLNRTA AFLVGTK+D++T++P EE EIDK ARK+AKAM APL+F+SASHSINVQKMFK+VLSKVFDL+C + EI GEPLL+F
Sbjct: 43 RGLNRTAQAFLVGTKFDIFTTLPPEEIDEIDKLARKYAKAMKAPLVFSSASHSINVQKMFKIVLSKVFDLKCTVAEIVEVGEPLLIF 129
BLAST of mRNA_H-paniculata_contig7742.15764.1 vs. uniprot
Match: A0A6U3ZUB0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3ZUB0_9STRA) HSP 1 Score: 136 bits (342), Expect = 3.590e-33 Identity = 64/87 (73.56%), Postives = 76/87 (87.36%), Query Frame = 3
Query: 6 RGLNRTAHAFLVGTKYDLYTSMPAEEQREIDKQARKFAKAMHAPLIFTSASHSINVQKMFKVVLSKVFDLRCNLEEITGAGEPLLLF 266
RGLNR A +FLVGTKYD++ +MP E Q +IDKQARKFAKAM APL+FTSA+HSINVQK+FKVVL++VFDLRC LE I G G+PLL+F
Sbjct: 119 RGLNRQAVSFLVGTKYDVFAAMPQEHQEDIDKQARKFAKAMKAPLVFTSATHSINVQKLFKVVLARVFDLRCTLENIEGVGDPLLIF 205
BLAST of mRNA_H-paniculata_contig7742.15764.1 vs. uniprot
Match: F0YJU8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJU8_AURAN) HSP 1 Score: 130 bits (326), Expect = 4.480e-31 Identity = 62/88 (70.45%), Postives = 74/88 (84.09%), Query Frame = 3
Query: 3 VRGLNRTAHAFLVGTKYDLYTSMPAEEQREIDKQARKFAKAMHAPLIFTSASHSINVQKMFKVVLSKVFDLRCNLEEITGAGEPLLLF 266
VRGLNR+A A LVGTKYD++ ++P EEQ EID+ ARKFAKAM AP IFTSA SINVQKMFKV+LS+VFDL+C LE++ GEPLL+F
Sbjct: 109 VRGLNRSAFALLVGTKYDVFVTLPPEEQAEIDRNARKFAKAMKAPCIFTSAHESINVQKMFKVILSRVFDLKCTLEKLVEVGEPLLIF 196
BLAST of mRNA_H-paniculata_contig7742.15764.1 vs. uniprot
Match: A0A6U4CJH1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CJH1_9STRA) HSP 1 Score: 129 bits (324), Expect = 1.310e-30 Identity = 63/89 (70.79%), Postives = 76/89 (85.39%), Query Frame = 3
Query: 3 VRGLNRTAHAFLVGTKYDLYTSMPAEE-QREIDKQARKFAKAMHAPLIFTSASHSINVQKMFKVVLSKVFDLRCNLEEITGAGEPLLLF 266
VRGLNR+AHAFLVGTKYDLYT E QR++DKQARK+A+AM APL++ SASHSINVQK+FK+VLSKVFDLR + +I G G+PLL+F
Sbjct: 124 VRGLNRSAHAFLVGTKYDLYTQQLDEAAQRDVDKQARKYARAMKAPLVYVSASHSINVQKLFKIVLSKVFDLRLTMTQIEGDGQPLLIF 212
BLAST of mRNA_H-paniculata_contig7742.15764.1 vs. uniprot
Match: A0A7S2CL26_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CL26_9STRA) HSP 1 Score: 129 bits (324), Expect = 1.860e-30 Identity = 60/87 (68.97%), Postives = 75/87 (86.21%), Query Frame = 3
Query: 6 RGLNRTAHAFLVGTKYDLYTSMPAEEQREIDKQARKFAKAMHAPLIFTSASHSINVQKMFKVVLSKVFDLRCNLEEITGAGEPLLLF 266
RGLNR A AFLVGTKYD++T++ E Q ++ KQARKFAKAM APL+FTSA+HS+NVQK+FKVVL+KVFDL+C L++I GEPLL+F
Sbjct: 139 RGLNRPAVAFLVGTKYDVFTTLSVEHQEDVTKQARKFAKAMKAPLVFTSATHSVNVQKLFKVVLAKVFDLKCTLDKIEEVGEPLLIF 225
BLAST of mRNA_H-paniculata_contig7742.15764.1 vs. uniprot
Match: A0A7S2UXX0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXX0_9STRA) HSP 1 Score: 127 bits (320), Expect = 3.530e-30 Identity = 59/87 (67.82%), Postives = 73/87 (83.91%), Query Frame = 3
Query: 3 VRGLNRTAHAFLVGTKYDLYTSMPAEEQREIDKQARKFAKAMHAPLIFTSASHSINVQKMFKVVLSKVFDLRCNLEEITGAGEPLLL 263
VR LNR AH LVGTKYD++T++P EEQ++IDKQARKFA+AM APLIFTS+ HSIN+QKMFK++L++VFDLR + I G GEPL L
Sbjct: 112 VRALNRNAHTLLVGTKYDIFTTLPPEEQQDIDKQARKFARAMKAPLIFTSSQHSINIQKMFKLILARVFDLRLTIPAIEGIGEPLFL 198
BLAST of mRNA_H-paniculata_contig7742.15764.1 vs. uniprot
Match: A0A316WBE5_9BASI (Septum-promoting GTP-binding protein n=1 Tax=Ceraceosorus guamensis TaxID=1522189 RepID=A0A316WBE5_9BASI) HSP 1 Score: 125 bits (313), Expect = 3.770e-29 Identity = 57/87 (65.52%), Postives = 71/87 (81.61%), Query Frame = 3
Query: 6 RGLNRTAHAFLVGTKYDLYTSMPAEEQREIDKQARKFAKAMHAPLIFTSASHSINVQKMFKVVLSKVFDLRCNLEEITGAGEPLLLF 266
RG N+TA FLVGTKYD + + P EEQ EI +QAR+FA+AM APLIF+S SHSINVQK+FK++LSK FDL+C + EI G GEPLL++
Sbjct: 95 RGFNKTAIPFLVGTKYDAFAAFPKEEQEEITRQARRFARAMKAPLIFSSTSHSINVQKIFKIILSKAFDLKCTIPEIKGVGEPLLIY 181
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 134.8 |
| Seed ortholog evalue | 2.3e-29 |
| Seed eggNOG ortholog | 2880.D7G5G8 |
| Preferred name | TEM1 |
| KEGG ko | ko:K06682,ko:K07976 |
| KEGG Pathway | ko04111,map04111 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000075,GO:0000166,GO:0000226,GO:0000278,GO:0000280,GO:0000910,GO:0001100,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005815,GO:0005816,GO:0005856,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007088,GO:0007093,GO:0007096,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0007346,GO:0008104,GO:0008150,GO:0009987,GO:0010458,GO:0010564,GO:0010639,GO:0010948,GO:0010965,GO:0010973,GO:0015630,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022402,GO:0023052,GO:0030071,GO:0031028,GO:0031577,GO:0031578,GO:0031991,GO:0032465,GO:0032467,GO:0032506,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032879,GO:0032880,GO:0032954,GO:0032955,GO:0032956,GO:0032970,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0034613,GO:0035556,GO:0035639,GO:0036094,GO:0040001,GO:0043167,GO:0043168,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044087,GO:0044089,GO:0044422,GO:0044424,GO:0044430,GO:0044446,GO:0044464,GO:0044732,GO:0044770,GO:0044772,GO:0045786,GO:0045787,GO:0045839,GO:0045841,GO:0045930,GO:0045931,GO:0048285,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051129,GO:0051130,GO:0051179,GO:0051234,GO:0051293,GO:0051301,GO:0051302,GO:0051493,GO:0051640,GO:0051641,GO:0051649,GO:0051653,GO:0051656,GO:0051716,GO:0051726,GO:0051781,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0060341,GO:0065007,GO:0070727,GO:0071174,GO:0071840,GO:0090068,GO:0097159,GO:0097367,GO:0110020,GO:0140014,GO:1901265,GO:1901363,GO:1901891,GO:1901893,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902099,GO:1902100,GO:1902363,GO:1902412,GO:1902542,GO:1902850,GO:1903047,GO:1903436,GO:1903438,GO:1903490,GO:1903827,GO:1905818,GO:1905819,GO:2000816,GO:2001251 |
| EggNOG free text desc. | septation initiation signaling |
| EggNOG OGs | COG1100@1,KOG1673@2759 |
| Ec32 ortholog description | SPG1, Ras superfamily GTPase |
| Ec32 ortholog | Ec-22_000550.1 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko04031 |
| Exons | 3 |
| Model size | 1910 |
| Cds size | 309 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7742.15764.1 >prot_H-paniculata_contig7742.15764.1 ID=prot_H-paniculata_contig7742.15764.1|Name=mRNA_H-paniculata_contig7742.15764.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=103bp
MPAEEQREIDKQARKFAKAMHAPLIFTSASHSINVQKMFKVVLSKVFDLR
CNLEEITGAGEPLLLFSKDENESAPGKSKGSVPGAVAAAPGTAGGRGDAT
PS* back to topmRNA from alignment at H-paniculata_contig7742:2119..11160+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig7742.15764.1 ID=mRNA_H-paniculata_contig7742.15764.1|Name=mRNA_H-paniculata_contig7742.15764.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9042bp|location=Sequence derived from alignment at H-paniculata_contig7742:2119..11160+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGTTCGAGGGTTGAACCGGACTGCGCATGCTTTCCTGGTGGGGACAAAG
TACGATCTGTACACGTCGATGCCGGCAGAGGAACAAAGAGAGATCGACAA
GCAGGTCTGTTGTTCAGCGTAACGCCCCTCCACCCTTGTTATGTTCAGTG
TGTAGATAATGACCGGGTAGTCCAGCAACTCTCAAGACGTTGAGCATATC
TGCGTTTTGTCTTGTTATTGTCGTTGTCTTGTTTTTTTACATTGCATTGT
TGATATTTTGCTGCGTTTAACCCTCTCCCCCCCCGGTAGGTGAAACATTT
TTGAGCCACATTTTGGCAAGATAGTATGGAGCGATTGGTCATTATCCATT
GGAAATCGCTCTGATAGGAACAATACTCTGTCCTCCCGAGGACACGTGGT
TGAGGGTCGAACGAAAACGGCAGAACGGAACGATGACTATATCCCGTCCT
GTAAGGCTCCTTAGTTTCGTGATACATGAACCCCTGCTTTTTCGATTATT
TTTGCGGATCTGTGCACACGGGCTGATATTTGAGGTCAGCTATACGGCCT
CAACATGGGTGCGTTAGAGTTGCTATATGAGTGTTGTAAACCTCCAAACT
GTGCCCCCCCCTCCACCCACCCTTAGATTTTGCAGGGGTGTTCTCGGTAT
TGCATGGTACATTTCTTGGAACCTGTGAAACCGGGCACAAAAGGAGAATC
ATTCAGAAAAAAAAAAGGTTCTAGGAGCATCGCGATAAATATACACTCTG
TGGGAAAGATCTCTCACCGTTAGATTTTGAGAAGTTCAACTGCCGATCAT
GTTATGCTAAATTTATCGTGCACGGTACTTTACTGTGGTGAACCGTTTTC
TGAATACCGTGAAAATCGTCCTGGCGATAGCAGGGTATTCACGTGGGCGT
TAGAAAAACATACGCCTAGATGTTGTTCCCACGGAGTGTCGCTTTAATGT
GGTGCTTTTAGTACCATTATAATCTCAATAATGCCCCTTTCGAGGGCGGT
TTCATACATTCCGAAAAAATACTGCGCAATACCACCAAGAACACACCCCT
GAATTTTATTTGTTTTGCCTTTGGAATCAGTCGCTCAGCAGTGTAAGGGC
CGTTCTTAACGTTGGTGTTGTTCGCTTTTTTTCTTTTTTTTCCTTCTTTC
CTTTTTTCCTTTTTTTTTCTCTTCCTTTTAAAAATATTATTGTTTAATTG
TTTTTTAATTATATTTAATTATTATTTTATTTTTCGTCTTTTTTTGTTTT
CTTCTCCCAGTGACATGTGGAGATTATTATGTCGGGAGAAATGTTAATAA
ATAAAAAAAATGAAATAGGGATAATGAACTGTAGAGGCAAAAAAAACACC
GACGTTTAGAACGGTTGTAAAGTGCATGAGCATACCTTCAGTTTTGATTG
GTTACTGATCGCTGTGGTGTGGTCATGTTTTCTATTTGTAGCACCTGTAC
ATGGTATTACAAACCGTAGTAATGTATTTACCATGTTGGCGATGCTGGCT
GTTCGGGCTGGTGTTGGGATTTTTCTTCGCAAGGGTCGTTGCTGCTATGG
TTTCTTGCTCCTGATCGGAGGGTATTTTTGGTTGTCTTCCATGTTGCGGT
ATCTTGAAGCTATCAGATTGTGCAGATTCAGTCGCAAACACTGTTACACC
AATCGAACACTGTATAGCATCTTACCTCCCTACACATACACACACACATA
CACATTTGGCAACATAAGCAAGAGAGCGCCGCCTTCCAGAGGACCCGTGG
TCGATAGTATAATAACTGCGACATGATTTACATGAGTACGCCGGCCCCAC
CGGATCACCAAATTGGCCCCTGCAGCGGTACTTCGTCTAGTTGTGGTTCT
TATCCATGCTTAAAGAAGGTTATTTAAAATAGTTTATTTCTTACATGCAA
TGACTTTTTCCTCTAAATATGTTATTATCCAGATTTTTTCTTCTTTTTTT
TTGGTTGAGGAATGGTTCGTTCAGTCGTGTTGGTGAAACTAGCTGAATGT
GTATGTTTTTTTTTTTTTCTCACATGAGTGGTACGTTGTTCTGACCAATG
GCTGTACCCTATGTTCGTCTCCATGTAAATCTAATCTTTCCCTCCCAGGT
GTACCTTGTTTTTGTCTACACATGTACCTTTTTCTTACCTTTAGGTGTGC
CTTGTTTGTGTCTACCGGTGTACCTTATTCGCATCTACATATGCACCTTG
AATACTTTTGAAATTGATTTTTGTGCCCGTCCCCCGCGTCCTCCCTATTT
CTATACTCCAATGAACAAGCAGGCGCGGAAGTTCGCGAAAGCGATGCACG
CCCCACTGATATTCACGTCCGCGTCACACTCCATCAACGTCCAAAAGGTG
GGTTTGCGCATCGTCGAGCGTTTTTCGAAATCATATCATCATTGTATTCC
TTTTGCTCCGTGCGTATGTGTGTGTGTGTGTGTGTGTTTGTGTTCGTGCA
TGTGTCCCTCCCTGCCCAAACGGAAGGACATAATACACAAATGGTGTCGG
AGAGTCACAAGTGTTGCAATTGTGTTTTTTTCTCCAAAACAATTCCTGTT
GACGATTCAATCCCTTCGGAGCGCAAGATGAATACCAATTAACTGCCCCC
GCTCGTTCCGAGGCGAAGGAAATGGCGACGAGTTAACCAATGCTCTTCTC
AGACGGGACGAGAGATGAATCCCGTGCCTGTACAATCACCGGTCATTGCT
ATTTCCAGCATATAGCACCTTTTGCACGGGAAAAAAGGGTAAAAAAAACA
GATTTTGACAGACAGATTTTCGACGTTCAAGACTGGAGCCCTTTAACTCC
CTTACGCCGGGAAACAAAAAAGCTTCCAGGAAGAAACAAATTTGTTCCTG
GAAGCCCAACGCGTACTTATCAACTACGATAGATATTAGTCATGCTGTCA
TGTCCCGATTGCCACGAACGACTGTGGCAGACCGTCTGCTGGTGTGCCTG
TGGTTACCGTCACCCGTATCAGGACCCCCACACACGCAGCGACTATCATT
CACTGCGGAAACATGGGGATACTATGCTGGTTCCTGCCAGCTCTTGTGTG
CCGCAGACATAGTGGTGCTGCATGCACGAATACATCGATTGTCTTCACTG
TGCATCCAGCAGTACTGCCTATATATTTGGTCGCTGGACGCAAGTCCATG
GCATTGTGTGTTTGTGCTGTGCAGATGATTGCCACCGCTCGAGGGACTTG
GTGTGTGTACTGCTGTCTGTCAGTTGTACCACCTCTAAATCAAGTACACG
ACGCTCCGGCTGCTGTGCCAGCTCTTGACGTACGTGAATATTATCAAAAT
ATCCGATGCTCCTTTTTCACCTGCCGTCGACATCTGGTACACCAAAACAC
GTCGCGATCCCGGTGTACCTATTTACCGTATGTTTGTCGACGTATTGGTC
TGGTCTCAACCTGGTGAAAGCAGTCCTATCCGTCGAAATTCGGCACCGTC
CTTCCTTGCCCCCCTTTTTCGATGCGGGACTGTCGAAAAGCGCACGTCGA
AATAGGTGGAAACGCAGTCTTGTTGGTCTATTGAACTATAAGTCCTCTTC
TTATGGCAGGAGTATTTCCCAGAGATTTTGACCGGGAAGTCCCTTTCCGA
AAACGTGAAAGTCTGTGTGCAAGTTATGGCCGAGCTCGGAGAATAGCTGA
TCAGTCAGAGATCAATGGGCGGTGGGGCATGGGAAAGTAAATATTAAAAT
GTTGTTCCTGTTCCACTACGACGAGGTTTCCATGTAAGGAATTTTTCTTC
ATTCGTGGTGCGGGCGGGCTTTTGCCCAGGCTGGTCATTCTCCAGACCAA
AGACGATATATACATGCGTGCTGTATTTCATCGGTCGTTTTCGCGAAGCT
TTTCCTCGAGGTGTAGGCGGGATGGATTTTCGATTGTCATCGTTGTAGGC
ATCGTCATCCATGAGAATGGTGGCAGCATGGAACAGCCTTGCAGCCGCAG
CTCAAGGTCATCATGGTTGCCCAGCGATGGGGACTCTTGGTGCTCCTGCG
GGGGTGCAGTCCCGCGGCTATCACCTCGGCATCATGTGTCTAGCTTGGCT
GTGTCGGCGTCAACGTGGGATGTGTGACTGATGTAGCGAACATTCAGTAT
GCGTTTTGCGTGTGAGAGATGTGTGAGGTGTGACAAATGTGTGCCGCATG
CTGGTGTATGGTGATTGGCTACTATCGTAACCATGGGACCTTCCGCGTAC
GTGCAGCAAACCCTGCACAAACAATAAACGGGTTTGGGAATTTGTCCCCA
CCCCCCAAAAAACAGGAAAAAAGGTGGGGGGCACTTTTTCTCGAAGGAAC
TTTCGATAATTTGTACACAGTGTTTTTTCTCGGGAAATAACTGACCCAAG
AAAAAAAAAAAAAAAAAAGGGCTCCAGACAACTCCTGCCGTAAGAATATG
GTCTGAGAGTTATATTACTAAATGGCGATTTTTTTTATATTGTAGTGCAG
ATATTTCGGAGTGGTGCTCTCCAACGTTTTTCCGATTGGAGGTCGAAGTG
TGGATCCTATTTGGAATTTTCTGAAATGATGAGAATTTTAACGCCAATTC
GGCTGCTCGTTCGGTTGGGCAACCCCAGTGTGCCACGCGATCATTATCCA
TTCTTGGTCCTTACTTATGGTTGAACGCTTCGTGTCTTTTTCCTGTCCTT
GATTCATACATGGGATGGCTTTTGCTGTATAGATTCTTGTGAAATGCCAA
GTGAGTGAGTGACACGTAGTATAGGGAAAAAGGTAATTTTTTCCTCGCTT
GAGTAATCCAGGTCTTGAACGGTTGGGCAATATTCCGACCATGTTATTTA
ACATAATAGCGATAATTACAGTGTAAATTTCATATTTCGATATATCTTGA
TGTATATTTTTTCATTGATTAGGGGAAGGACGAATATAATAGGTCGAGAT
GTGTTCGACGGGATAGTGGAGTTGTTGACTTTCGACATGAAACGATATGC
CCTATGGCGTTGTGGAAAATGACCAATCGAAACACGTCGTACATACAACA
TTGTATGCGTGTGTTTGGGCTTTGCCAGGACGTGGTGTAGTTGCGGTTTT
CACCGAGTATGGCATGTTTGTTGCACGGTACTGTGTTGAATATATATGAC
CTGTTGTCGTTTGTACAACGAACACGGGGTGAGATACCGTTTAATGGCGA
AGCCAACGGCGGCGAGACACACAAAGTACCCCTGTCGCTTAGGGGGGAAC
CTCGTCACAAACGGAGGGGAACGAACCCACGCTGCATGGACTGGTGATGT
TTGTGTCGTAGTCTTCGTTTCATATTCCCATATACAATGACATGAGACCG
ATACGTTCATGACCGCCTCGAGAGCAGACCCAGGCAGAGTGGAGTTGAGA
GAGACAGGGGTGGGGTGCGATGCGCGTAGGGGGGGGGGGGGGGGGGGGGG
GAAAAAAATAGAGGGGAAAATAAAAAGGGATACTCTGTATTAAAAATCTT
TAAAAAATAAAATTGGGGAGAATTTTGAAAAAAAAANNNNNNNNNNATAA
GAAGTAGACAACGAAGAGCAGGGCGACGACGGCGCCGAGGGGAGGGCGGG
GAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGTGGGGGGAGAGGGTTAATACATGATGATGTAACTTAACATGGAATT
CCTGTATATAAAATCTTTGAAAAATGAAATTGGTGGAAGTATTTGAAAAC
AAAATTCCGCATAATGACCGATTTCAACCCTTTGGCTCCTGAGGGGCCGG
GGGTCTGACATGTCATGAAACGCGAAATCTCACAGTCCCGTGTCGCAAGA
AGGCGAGGAAGGAGGGTCGTTTCATGACATAAATAAGATTTTTTTGTGGG
CGTGAGTAACATCATTCCCGCCTATGATATATATGTATACTACGAAATGA
ATGGAATCATGTAACATACAAAAGGAGTCGTAGACTAAAATCAGCATACA
GTCAGGTGACTGACGCCAGGAGCGAAAGGATTTACTTCAAAGCTTCTCGT
GTTTTTCATTTCAACCATGGCACGTCCACCGCTGATGTGCTCCAGACCTC
CCAAAATACGTTGGTTCCGTCGAGCGGTGACGGCCAACTGGGCAGCATAA
TCACAGCATGATACAGTCAGCAGAGTTGGGGATCGGCCACGAACGAAACA
GAAAACGAGTTGGACACATGAAGTATAATTTATTTATTGTCTGTACTCCG
GTAACTAATGGCAACGCAATGATGAGAGGGGGAGAGGTTGTAGGCACCAG
GATCTCCCGGGAGTTTCTTAGCGGGACGGTAGCCTCTACTCTATGCCGTC
TTCTTGTGCATGATCGTACCTATAGACACAGGACCAGTAGGCAGCCTGCC
ACAGCCGTAGTCCGAGCATGGCAACATGGGTCATAGCGTCTAGTACACAA
TTGGTAGTTCGGCGTTCGGGCCTCCTGAAAAAAAAAACTTGCTTCTGTCA
ACCGGGGGTTTTTTTGGGAGTCAAAGGGTCAAGATCTTGTGACCTCTGTA
TCAGCTGTGGAGCGCTTAGTTCATTATGAAAATAATACGGTGTCTGCCCG
TTCTCGCTCTGCACTATATCCGAGTAGAATTTCCCAAAAACGACGAAAAA
AAGACTCACTTGTGCACTTGAAATGAACCAACCAGCTGTCTAGAGCTGGT
CCAGCATTTTGCCATTATATTCGTCATTATTCATTACTGGTTGTTAGCAA
ATCTATCGTTTTGGGCGTTAAGAAGGTCGGTTCCTGAATGGTTGAACGTC
TTGAAAAGAACAGAATTTCCGTATGATGAATTTAGAATACGAACCCCGTT
GTTTGTAGAATACTTGGAATAGCCGAATTCTCGATTTGTGCTGGGTACTT
ACTGCCTGCCGCCCGCGTGGTCTCTGTAGTGCGCAACCGTCGCGCCACAA
TGAGCTCTCCGACAGAATGCATCATCAATTAGTTAGGAAAAACAATGATG
GGGGGGGGGGGGGGCACTGGCCGGATAAAATCGGCCTGTTATATCGTTTG
TAACCTGTTATTGGTCATGATCTTATTTTTGTCGTGAGTGAGTGTACACA
AACAGCTGAAGTTTGATTTCGGTTCCATAAACTCAACATAAAAGTAACGG
AGTTTTTTTTTCAGAGGCGTAACCCCGTATTGGTCATGATCTAATTTTGC
GGGGATAAGTGTACACAATTGTAGATTTTAAGTCAGCCGCATAGCCTCAA
CATGGGTACAGTGGAGTTAGTATATAAGCTTCAGACCTATAGTTTAACTG
ATCACCTTCCCCCCCCAATATATATATATATATTTAATTTCCTTGATCAA
TTCGTAAATAGATGTTTAAGGTGGTGCTCTCGAAAGTTTTCGATTTGAGA
TGCAACCTGGAGGAGATCACGGGAGCGGGGGAACCTCTTCTGCTTTTCTC
TAAAGATGAAAATGAATCTGCTCCGGGGAAGAGCAAGGGTAGCGTGCCTG
GAGCGGTGGCGGCGGCGCCTGGGACGGCTGGTGGGCGGGGTGACGCAACA
CCATCATGATTAGTGATACTATTGCTTCTGTTTTTTTATTTTTATGTCGC
TGTTGTACGATTATATATATTTTTTATCTTATATATATGTGTGTGTGTGT
GTACGTGTAGATGGTCGTGTCGTATTGTTTCTATCTGTTTTGTGTGTTTT
TCGTTTTTCGTTCTTTGTTTTCAGCGGGTAATGTTTTAAGGGAAGGTGCC
GTGAATTATCGAAGAAATCAACGAAATGAGAGATAGGCAATATCTTCTTC
TTTTCCCGTTGAAGGGAAGGCACCGTATTTGTGTGCTTTTCCTTCCTGTT
ATATTTCTGTTTCTGTCTTTTTGTTTTTAATGAAAATTGAAGGAAAATTC
AAAGAAAAAAAAGGGTGAAAAAAAAAAAGGTGAAACAGTGAGTGGTCGTT
TGATATTGAGGCGTTTTTTGTGTCCTGGAAAGATACATATTCATTTTTGT
GTTTTTTTTTTTGTTTTTTTGCTCTTTCATATGAGTTCATTTATTTTGTA
AGACACACACACAGCGATGCCGCTCTTCATGTAGAAACGTTTTCTGCATC
ATGTGACGACGATTAACTAACAATGGCAGAGGGCACTAGATGCTTCTCCT
GTTTGGTGTTTTACTTAGTGCAGATAGCAAGGGGTCAAAATGGAGCACGA
GATGGGGCGGAACGAATCGGAGCAGGAAAGGGTGATTAGGAATGAAACAA
GAGAGACTGGTATTTTGATGGAATGGAGCCAGACGGGAACATGGTATTCA
TACCTCAACTGGACTAGACCATTGAGGGTGGGATTTTCACGGGATGGCCA
CGCCAAAACTCCTGTCCCATTCCCTCTAGTACTCGTCGGAACCTCGCCCA
GAACTCTCCGACTGTGGCATAGTTGTAATTATAGTCGTTGAGATCCAATT
TTTGTTGCACATGGGATTAATCTGCTGTGCCAGAGGATGTCATGGGTTCG
AACATTCCGTGGAAGGAGGAGAGAGCCCGTATTATACAGCAGTATCGTTG
GCGGATTCGGTTGGGTATTGTGTTCTGACGGGGATGTGTCCTTGATTTTT
TACGGAAGGGACCCATCCCCCGTGAGTGCCCTCGTAGGATATATATATAT
ATATATGCGAATTCGGTCCCGTTAACGATGTGGTCCTGTTGGAAGAAAAG
ACAGGATGGAGCGTGAGGATTGTGTCTGATCCAGTGCAGGTTCCGTGGTG
GTTTCTAAGTAAGCCCTGCAAATAGAATCGTTTTTGTGGTTGTTTTGTGT
GTAGTGTATGTGCATGCTTTCCTCCCGCTTGCAGGCATTTTTCGTCTTCT
TTTACCGACTGTATATGTTTTTGTGATGATTTGCTTTTTTTCCTAATATG
TTTTGATGGTCGGGGCGTGAGTAGGTAGGTGGATGGGTGGGTGGAAATGA
TAGGCACGACTGTTGTAGTGTATCGTGTAAATGTACCGTGTCGCTCCCTT
CTATTTTTGTTTTCTTTTGTTTTCTTTTGCTCTTTTGGCTGTTGGGGCAC
GGACCCGTCAGTTCAGTTATGTAAAGGTGGTCGCTACAGCGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig7742:2119..11160+ >mRNA_H-paniculata_contig7742.15764.1 ID=mRNA_H-paniculata_contig7742.15764.1|Name=mRNA_H-paniculata_contig7742.15764.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=618bp|location=Sequence derived from alignment at H-paniculata_contig7742:2119..11160+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCGGCAGAGGAACAAAGAGAGATCGACAAGCAGATGCCGGCAGAGGA
ACAAAGAGAGATCGACAAGCAGGCGCGGAAGTTCGCGAAAGCGATGCACG
CCCCACTGATATTCACGTCCGCGTCACACTCCATCAACGTCCAAAAGGCG
CGGAAGTTCGCGAAAGCGATGCACGCCCCACTGATATTCACGTCCGCGTC
ACACTCCATCAACGTCCAAAAGATGTTTAAGGTGGTGCTCTCGAAAGTTT
TCGATTTGAGATGCAACCTGGAGGAGATCACGGGAGCGGGGGAACCTCTT
CTGCTTTTCTCTAAAGATGAAAATGAATCTGCTCCGGGGAAGAGCAAGGG
TAGCGTGCCTGGAGCGGTGGCGGCGGCGCCTGGGACGGCTGGTGGGCGGG
GTGACGCAACACCATCATGAATGTTTAAGGTGGTGCTCTCGAAAGTTTTC
GATTTGAGATGCAACCTGGAGGAGATCACGGGAGCGGGGGAACCTCTTCT
GCTTTTCTCTAAAGATGAAAATGAATCTGCTCCGGGGAAGAGCAAGGGTA
GCGTGCCTGGAGCGGTGGCGGCGGCGCCTGGGACGGCTGGTGGGCGGGGT
GACGCAACACCATCATGA back to top
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