mRNA_H-paniculata_contig7740.15763.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig7740.15763.1
Unique NamemRNA_H-paniculata_contig7740.15763.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig7740.15763.1 vs. uniprot
Match: A0A6H5JR55_9PHAE (LETM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR55_9PHAE)

HSP 1 Score: 222 bits (566), Expect = 1.930e-59
Identity = 145/369 (39.30%), Postives = 205/369 (55.56%), Query Frame = 3 
Query:  501 LAVQQKGAWKRFVATFMDFANAAKLLWAEYQLAGKAKARLEQGYTLSWRERRLVRGVPRDLWKAGPILLVFGIPIVGYIAPIVGVLYPKNLLPRQFWSSAQHLEYMLQDAVQQELSYFPALLRCLAAFASPPRPSSTRDELLLATGWFDEEGHLDRLSREHLRHLIQSCNVMPIAKKLSSVVMPKRVLVSWLDKEAAWISEDDLALLELLRVDGFLKLENNTVQEEPPLESEGITTNGGGGVEAIFTISPQELRILCWERGLLRSQ-------QEGAAGALRTEGRGG---DQSTAEASSM-LLQRLEAWLSLYAEDDITRTIGGKL--HTKWPSYQQ-----PPRRVPASMVLHAPALLRLTGSGSFS 1553
            +A  +K A +        F    K+LW +++ + + KA+   G  L+++E R +R V RDL KA P+L VF +PI GY+AP +G ++PK +LP QFW+S Q L +ML+DA +QE+S FP LL+ LA  AS PRP+S+  +L  +  WF +EG+L+RLSREHL  L++SCN +P  K+ ++   PK  LVSWL  EA  IS DDLAL +    +   ++           + EG   N          ++  E+ +LCWERGLLRSQ       +  A GA  T G  G   D+   EA +  +L  L A+LSLY     TR + G+    +    Y           +P SMVLHAPALLR+T S + S
Sbjct:  106 VAADKKSARRSVKELIAQFTKGTKVLWLDFKGSRQTKAKKRAGQVLTFQENRQLRQVGRDLAKALPVLTVFSLPIAGYLAPALGYIFPKTMLPPQFWTSPQRLRFMLEDAKKQEVSSFPKLLQHLAMMASSPRPNSSPGQLQFSATWFWKEGNLNRLSREHLLQLMKSCNTVPPFKRATARFAPKSSLVSWLTTEATSISNDDLALRKQFYDEAKARISG---------QEEGSKLN----------LTAPEVLLLCWERGLLRSQHWPDAHLRWAADGA--TSGSAGTAVDEPIPEAEAKAMLGSLRAYLSLYDSPSATRNLRGRSLDDSVGADYDVLSSCGTGAALPPSMVLHAPALLRITHSANGS 453
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BLAST of mRNA_H-paniculata_contig7740.15763.1 vs. uniprot
Match: D7FIH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH6_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 1.230e-38
Identity = 112/279 (40.14%), Postives = 150/279 (53.76%), Query Frame = 3 
Query:  771 LLPRQFWSSAQHLEYMLQDAVQQELSYFPALLRCLAAFASPPRPSSTRDELLLATGWFDEEGHLDRLSREHLRHLIQSCNVMPIAKKLSSVVMPKRVLVSWLDKEAAWISEDDLALLELLRVDGFLKLENNTVQEEPPLESEGITTNGGGGVEAIFTISPQELRILCWERGLLRSQ-------QEGAAGALRTEGRGG---DQSTAEASSM-LLQRLEAWLSLYAEDDITRTIGGKL--HTKWPSYQQ-----PPRRVPASMVLHAPALLRLTGSGSFS 1553
            +LP QFW+S Q L +ML+DA +QE+S FP LL+ LA  AS PRP+S+  +L  +  WF +EG LDRL R+HL  LI+SCN +P  K+ ++   PK  LVSWL  EA  IS DDLAL +    +   ++           + EG   N          ++  E+ +LCWERGLLRSQ       +  A GA  T G  G   D+   EA +  +L  L A+LSLY     TR + G+    +    Y           +P SMVLHAPALLR+T S + S
Sbjct:    1 MLPPQFWTSPQRLRFMLEDAKKQEVSSFPKLLQHLAMMASSPRPNSSPGQLQFSAKWFWKEGSLDRLPRQHLLQLIKSCNTVPPFKRATARFAPKSSLVSWLTTEATSISNDDLALRKQFYDEAKARISG---------QEEGSKLN----------LTAPEVLLLCWERGLLRSQHWPDAHLRWAADGA--TSGSAGTAVDEPIPEAEAKAMLGSLRAYLSLYDSPSATRNLRGRSLDDSVGADYDVLSSCGTGAALPPSMVLHAPALLRITHSANGS 258
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BLAST of mRNA_H-paniculata_contig7740.15763.1 vs. uniprot
Match: A0A6G0XQ24_9STRA (Letm1 RBD domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQ24_9STRA)

HSP 1 Score: 104 bits (259), Expect = 2.090e-20
Identity = 91/324 (28.09%), Postives = 147/324 (45.37%), Query Frame = 3 
Query:  597 AGKAKARLEQGYTLSWRERRLVRGVPRDLWKAGPILLVFGIPIVGYIAPIVGVLYPKNLLPRQFWSSAQHLEYMLQDAVQQELSYFPALLRCLAAF----------ASPPRPSSTRDELLLAT-----GWFDEEGHLDRLSREHLRHLIQSCNVMPIAKKLSSVVMPKRVLVSWLDKEAAWISEDDLALLELLRVDGFLKLENNTVQEEPPLESEGITTNGGGGVEAIFTISPQELRILCWERGLLRSQQEGAAGALRTEGRGGDQSTAEASSMLLQRLEAWLSLYAEDDITRTIGGKLHTKWPSYQQPPRRVPASMVLHAPAL 1523
            A ++K +      LS RE  ++R  PRDL K+ P+L+ F IP+VGY+AP++G  YPK LLP QFW++    E++ +D V+++ +++P +   +A+           A+     + R+++   T       F+  G L++LS +HLR L+++ +  P     +   +PK  +V  L++ A+ IS DDL LL+                            NG      +  +S QEL   C ERGL+   ++  A  +                     LE WLS+Y              TK P  Q      P+S++LHAP L
Sbjct:   68 ASRSKLQANPDVVLSRREMFVLRQAPRDLIKSLPLLIAFAIPVVGYVAPVLGYYYPKWLLPWQFWTAEDKAEFLEED-VRKKATFYPEVASLVASIDSSNTFLQDAAAAYAKDTDREKMDPKTLPEFRELFESPGALEKLSTKHLRLLLRATSASPFVGFYA--YLPKDTIVQRLERRASEISVDDLLLLQ---------------------------PNG------VKDLSVQELIFACEERGLVVPYKDEDACRVA--------------------LEEWLSMY-------------DTKQPRAQ------PSSLLLHAPIL 316
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BLAST of mRNA_H-paniculata_contig7740.15763.1 vs. uniprot
Match: A0A836C829_9STRA (LETM1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C829_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 2.860e-17
Identity = 40/104 (38.46%), Postives = 69/104 (66.35%), Query Frame = 3 
Query:  555 FANAAKLLWAEYQLAGKAKARLEQGYTLSWRERRLVRGVPRDLWKAGPILLVFGIPIVGYIAPIVGVLYPKNLLPRQFWSSAQHLEYMLQDAVQQELSYFPALL 866
            F    K LW E++ +   + +L  G TL+ +ERRL+R  P D+  A P++++F +P++GY AP++G+ +P+ LLP QFW+ AQH ++  Q A++ +++  P LL
Sbjct:   29 FVAGGKTLWYEHKTSRLLRQKLRDGETLTGKERRLLRQNPEDIKLAIPLVVLFCVPVLGYAAPLIGLAFPRVLLPPQFWTDAQHAQFAQQAALELQITGQPKLL 132
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BLAST of mRNA_H-paniculata_contig7740.15763.1 vs. uniprot
Match: A0A1V9ZMJ6_9STRA (Letm1 RBD domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZMJ6_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 3.080e-17
Identity = 86/335 (25.67%), Postives = 136/335 (40.60%), Query Frame = 3 
Query:  555 FANAAKLLWAEYQLAGKAKARLEQ--GYTLSWRERRLVRGVPRDLWKAGPILLVFGIPIVGYIAPIVGVLYPKNLLPRQFWSSAQHLEYMLQDAVQQELSYF----------PALLRCLAAFASPPRPSSTRDELLLAT--GWFDEEGHLDRLSREHLRHLIQSCNVMPIAKKLSSVVMPKRVLVSWLDKEAAWISEDDLALLELLRVDGFLKLENNTVQEEPPLESEGITTNGGGGVEAIFTISPQELRILCWERGLLRSQQEGAAGALRTEGRGGDQSTAEASSMLLQRLEAWLSLYAEDDITRTIGGKLHTKWPSYQQPPRRVPASMVLHAP 1517
            F N A  L  E + A  ++ RL +     L+ RE  ++R  PRDL K+ P+LL FG+P++G +AP++G  +PK  LP QFW+ AQ  ++  +D  ++   Y           P L   LA++     P +  D  ++      F+  G L++L   HL+ L+ + +  P  +  +   +P+  L+  L   +  I  DD  LL+                                  E +  +SP EL   C ERGL+    + AA                        L+ WL+LY  D+ T                     PAS++LHAP
Sbjct:   56 FTNGASELVRENKDAWTSRRRLYEHPDTVLTRREMFVLRQAPRDLLKSIPLLLAFGVPLLGNLAPVIGYKFPKLTLPWQFWTPAQKAQFFSEDVAKKSAHYGDIARLITTWDPFLQTALASYLESKEPRAKLDPKVIVEYQKLFEGPGMLEKLPTRHLQLLVLATSASPFVRLYT--YLPRAKLIDRLQTRSDEIGIDDRLLLK----------------------------------EGLEALSPNELAFACEERGLVVDFADVAA--------------------CRSALQEWLTLYNPDENTL-------------------YPASLILHAP 315
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BLAST of mRNA_H-paniculata_contig7740.15763.1 vs. uniprot
Match: M4BPP6_HYAAE (Letm1 RBD domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BPP6_HYAAE)

HSP 1 Score: 90.5 bits (223), Expect = 7.170e-16
Identity = 91/343 (26.53%), Postives = 141/343 (41.11%), Query Frame = 3 
Query:  534 FVATFMDFANAAKLLWAEYQLAGKAKARLEQGYTLSWRERRLVRGVPRDLWKAGPILLVFGIPIVGYIAPIVGVLYPKNLLPRQFWSSAQHLEYMLQDAVQQELSYFPAL------------LRCLAAFASPPRPSSTRD-ELLLATGWFDEEGHLDRLSREHLRHLIQSCNVMPIAKKLSSVVMPKRVLVSWLDKEAAWISEDDLALLELLRVDGFLKLENNTVQEEPPLESEGITTNGGGGVEAIFTISPQELRILCWERGLLRSQQEGAAGALRTEGRGGDQSTAEASSMLLQRLEAWLSLYAEDDITRTIGGKLHTKWPSYQQPPRRVPASMVLHAPAL 1523
            FV  F       K  WA  +   ++K +L    TL+ RE  L+R  PRDL K+ P+L+ FG+P+VGY AP++G  +PK LLP QFW   Q  +++ ++   +  +Y   +            LR + A A+    S  R  E+     +F+    L +L  +H+  L +   + P    L+ ++M  + L   L +    IS DD  LL+                                  E +  +S  EL   C ERG++   Q G    LR                    L+ WLS+Y  D          H+   S+ Q    +P+S++LHAP L
Sbjct:   18 FVTGFKGLYQENKQAWALRRRLQESKGQL----TLTRREMLLLRQAPRDLLKSLPLLVFFGVPLVGYAAPLLGYQFPKQLLPWQFWRPDQKSQFLCEEVEARAQTYPQVVELLLQIQHKDDTLREMLALANTKGNSGLRPTEVAELVPFFEGPASLQQLPSQHIHVLSEGTALFPFFAVLNKLLMRSQ-LEKRLVRRTMEISMDDQQLLK----------------------------------EGVDDLSLSELEFACHERGIVT--QYGDIPTLR------------------YALKEWLSMYDTD----------HSDPVSHMQ---SLPSSLLLHAPVL 288
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BLAST of mRNA_H-paniculata_contig7740.15763.1 vs. uniprot
Match: A0A1V9ZZ01_9STRA (Letm1 RBD domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZ01_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 7.350e-16
Identity = 65/205 (31.71%), Postives = 106/205 (51.71%), Query Frame = 3 
Query:  555 FANAAKLLWAEYQLAGKAKARLEQ--GYTLSWRERRLVRGVPRDLWKAGPILLVFGIPIVGYIAPIVGVLYPKNLLPRQFWSSAQHLEYMLQDAVQQELSYFPALLRCLAAF-------------ASPPRPSSTRDELLLATGWFDEEGHLDRLSREHLRHLIQSCNVMPIAKKLSSVVMPKRVLVSWLDKEAAWISEDDLALLE 1124
            F N AK L  E + A  ++ RL +     L+ RE  ++R  PRDL K+ P+LL+FG+P++G IAPI+G  +PK  LP QFW++ Q  E+  QD + ++ SY+ A+ + +A +             +S P+ +      +     F+ +G L  L   HL+ L+ + +  P  K  +    P+  L+  L+  A  I  DD  LL+
Sbjct:   54 FTNGAKELIQENKEAFASRRRLYELPNTILNRREMFVLRQAPRDLLKSIPLLLMFGVPMLGNIAPIIGYKFPKLTLPWQFWTAEQKAEFFSQD-IAKKSSYYGAIAKLVAEWDPSFANIHAAYNDSSLPQANIEPKLFIQYLTKFESQGALHELPSHHLKLLVLATSASPFVKLYT--YFPRAKLIDRLELRALEIGIDDRLLLK 255
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7740.15763.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JR55_9PHAE1.930e-5939.30LETM1 domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FIH6_ECTSI1.230e-3840.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6G0XQ24_9STRA2.090e-2028.09Letm1 RBD domain-containing protein n=1 Tax=Aphano... [more]
A0A836C829_9STRA2.860e-1738.46LETM1 domain-containing protein n=1 Tax=Tribonema ... [more]
A0A1V9ZMJ6_9STRA3.080e-1725.67Letm1 RBD domain-containing protein n=1 Tax=Achlya... [more]
M4BPP6_HYAAE7.170e-1626.53Letm1 RBD domain-containing protein n=1 Tax=Hyalop... [more]
A0A1V9ZZ01_9STRA7.350e-1631.71Letm1 RBD domain-containing protein n=1 Tax=Thraus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7740contigH-paniculata_contig7740:3878..11031 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score104.4
Seed ortholog evalue1.6e-19
Seed eggNOG ortholog115417.EPrPW00000019188
Preferred nameLETMD1
Hectar predicted targeting categorymitochondrion
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006873,GO:0006875,GO:0008150,GO:0009987,GO:0016020,GO:0019725,GO:0019866,GO:0030003,GO:0031090,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0048878,GO:0050801,GO:0055065,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0070013,GO:0098771
EggNOG free text desc.LETM1 domain-containing protein 1. Source PGD
EggNOG OGs1MDY9@121069,KOG4263@1,KOG4263@2759
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-28_000310.1
COG Functional cat.T
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Exons7
Model size3674
Cds size1473
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930960.9579558-UTR-H-paniculata_contig7740:3877..39241622930960.9579558-UTR-H-paniculata_contig7740:3877..3924Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7740 3878..3924 +
1691481528.702851-UTR-H-paniculata_contig7740:3877..39241691481528.702851-UTR-H-paniculata_contig7740:3877..3924Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7740 3878..3924 +
1622930960.9708924-UTR-H-paniculata_contig7740:4431..44671622930960.9708924-UTR-H-paniculata_contig7740:4431..4467Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7740 4432..4467 +
1691481528.7143672-UTR-H-paniculata_contig7740:4431..44671691481528.7143672-UTR-H-paniculata_contig7740:4431..4467Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7740 4432..4467 +
1622930961.0852518-UTR-H-paniculata_contig7740:8913..110311622930961.0852518-UTR-H-paniculata_contig7740:8913..11031Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7740 8914..11031 +
1691481528.7716293-UTR-H-paniculata_contig7740:8913..110311691481528.7716293-UTR-H-paniculata_contig7740:8913..11031Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7740 8914..11031 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930960.9847467-CDS-H-paniculata_contig7740:4467..50521622930960.9847467-CDS-H-paniculata_contig7740:4467..5052Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7740 4468..5052 +
1691481528.7242558-CDS-H-paniculata_contig7740:4467..50521691481528.7242558-CDS-H-paniculata_contig7740:4467..5052Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7740 4468..5052 +
1622930960.998747-CDS-H-paniculata_contig7740:5480..56361622930960.998747-CDS-H-paniculata_contig7740:5480..5636Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7740 5481..5636 +
1691481528.7317483-CDS-H-paniculata_contig7740:5480..56361691481528.7317483-CDS-H-paniculata_contig7740:5480..5636Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7740 5481..5636 +
1622930961.0157692-CDS-H-paniculata_contig7740:5876..59891622930961.0157692-CDS-H-paniculata_contig7740:5876..5989Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7740 5877..5989 +
1691481528.7394261-CDS-H-paniculata_contig7740:5876..59891691481528.7394261-CDS-H-paniculata_contig7740:5876..5989Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7740 5877..5989 +
1622930961.0305908-CDS-H-paniculata_contig7740:7335..74971622930961.0305908-CDS-H-paniculata_contig7740:7335..7497Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7740 7336..7497 +
1691481528.7489395-CDS-H-paniculata_contig7740:7335..74971691481528.7489395-CDS-H-paniculata_contig7740:7335..7497Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7740 7336..7497 +
1622930961.0531595-CDS-H-paniculata_contig7740:7954..82391622930961.0531595-CDS-H-paniculata_contig7740:7954..8239Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7740 7955..8239 +
1691481528.7565515-CDS-H-paniculata_contig7740:7954..82391691481528.7565515-CDS-H-paniculata_contig7740:7954..8239Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7740 7955..8239 +
1622930961.0688512-CDS-H-paniculata_contig7740:8741..89131622930961.0688512-CDS-H-paniculata_contig7740:8741..8913Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7740 8742..8913 +
1691481528.7640204-CDS-H-paniculata_contig7740:8741..89131691481528.7640204-CDS-H-paniculata_contig7740:8741..8913Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7740 8742..8913 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7740.15763.1prot_H-paniculata_contig7740.15763.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig7740 4468..8913 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig7740.15763.1

>prot_H-paniculata_contig7740.15763.1 ID=prot_H-paniculata_contig7740.15763.1|Name=mRNA_H-paniculata_contig7740.15763.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=491bp
MTISMVMAGGARFGSRKGKAMLALYGYAILSRRCHRAMAHSVILGPLYTG
DLRPFSSNSTTAASKPDGVAEVSAVHDRVGAAFKINGGGVDPKVAAEYRQ
HSRGSEQAAKAKGPTKGEEAENTKSWETNDRNSTSSDAELAVQQKGAWKR
FVATFMDFANAAKLLWAEYQLAGKAKARLEQGYTLSWRERRLVRGVPRDL
WKAGPILLVFGIPIVGYIAPIVGVLYPKNLLPRQFWSSAQHLEYMLQDAV
QQELSYFPALLRCLAAFASPPRPSSTRDELLLATGWFDEEGHLDRLSREH
LRHLIQSCNVMPIAKKLSSVVMPKRVLVSWLDKEAAWISEDDLALLELLR
VDGFLKLENNTVQEEPPLESEGITTNGGGGVEAIFTISPQELRILCWERG
LLRSQQEGAAGALRTEGRGGDQSTAEASSMLLQRLEAWLSLYAEDDITRT
IGGKLHTKWPSYQQPPRRVPASMVLHAPALLRLTGSGSFS*
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mRNA from alignment at H-paniculata_contig7740:3878..11031+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig7740.15763.1 ID=mRNA_H-paniculata_contig7740.15763.1|Name=mRNA_H-paniculata_contig7740.15763.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7154bp|location=Sequence derived from alignment at H-paniculata_contig7740:3878..11031+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTCTCTGTGACTCTCCTCTCTCCCTGCTCAACGTACTTGTGAGGCAGGTA
TGCACGTGATGTGATAGCTATTAGTCATTAGTATCCTCATCCTTGTGGAA
GTGCGTTGTCCACCAGGTAGAAAGCGAGTGTGTACATGACAAAGGATTAG
GAGGACAATACAACTATGTTTCATCTTGTATTTGACTCACACCAGTAGTT
TGTAATGACAGTCGGTAGGTCCGCCCGGAACAAGCCACACTGCACTGTAC
CAGTAGGGAACGCAACAATATGTATACCGTTTGGAAAGTGGTTAATTGAT
TTGGCAGGATTTGCGCTGACTGGCGTGCTATTCAAGCAAACCTGTGCCAA
CTTGGTCATCTGCAATGCAGTAGAGAGTATCCAGTACGATTCAGTACGAT
TGGCACAACGATATCCTACTACCGTACTGTAATCGAAGATGTCACATTGT
GAGCGTGCTGGGCAGCCCTCCGCCCTCAAACATTGTGTGCCTCACCTACT
CCCTCGGGCGACATGTTCTTTGCTGTTTTACTTACGGTTCAAACGCAACT
GCAGGATCTGGTATTTTTTTGAACGTTGGATAAATATCCCATGACTATTA
GTATGGTCATGGCAGGGGGGGCTAGATTTGGCAGCAGGAAAGGCAAGGCC
ATGTTGGCGCTATATGGCTACGCGATATTATCAAGGAGATGTCACCGTGC
AATGGCGCACTCGGTGATTTTGGGGCCTTTGTATACGGGGGATTTACGGC
CGTTCTCCTCCAATAGCACTACCGCGGCAAGCAAACCTGATGGGGTCGCT
GAAGTTAGTGCTGTGCATGACAGAGTTGGTGCTGCTTTCAAGATCAACGG
CGGTGGGGTTGACCCAAAAGTAGCAGCAGAATATCGACAACATTCTAGAG
GTTCCGAGCAGGCAGCAAAGGCAAAGGGACCAACAAAAGGGGAAGAGGCA
GAAAATACCAAGAGTTGGGAGACGAATGACCGTAATAGTACGAGTAGTGA
CGCGGAACTGGCTGTGCAGCAGAAAGGGGCGTGGAAGAGGTTTGTGGCAA
CTTTCATGGACTTCGCGAACGCAGCGAAGCTGCTCTGGGCTGAGTATCAG
CTCGCTGGAAAGGCAAAAGCCAGACTGGAACAAGGGTACACGCTATCCTG
GCGGGAGCGACGTTTAGTCCGAGGGGTGAGGCCTCAGTTTTTAGTTTTAA
GTTTGACCATAGCTCTACATTTCCACCTTGCCTTGCCTTTTAGTCTCAGT
ATGATCAATCGATGCCATCTTCATGTCGCGTGCCACATCATATGCCAAAT
GCTCATGTGCTGATGCTGATGGTGGAGATTATTGTTACCATCCTGGTAGT
GGTGAAAGTGGCGACCCAACCAGAATCATTTTAACTTGGAACAAAATCAC
GTGATGTTAATGGATGACCTGAACAGTCTATTATCCCATGGTGAACATGA
TTGATGATTGTGTGTCCCTGCGATCTGCATCTTATCCACTTCACTCCAAA
GCGTGATTGCCGTTTTTGTTTTCGACGTGTTCTGTCGTCCGCTGTAGATA
GTACCGCCTGTGCTGTCTGACTTATGAGGCGGGGATTTCTCACTTTTTGC
CAGGTCCCACGAGACTTGTGGAAGGCTGGGCCCATTCTGTTGGTCTTCGG
GATTCCCATCGTAGGCTACATTGCACCTATTGTGGGCGTGCTATACCCCA
AAAACCTGCTGCCAAGACAATTCTGGAGCTCGGCTCAACACTTGGAGTAT
ATGCTGCAGGTAATAAATCATGACTTGTACACCCGCGTGGCATTCCCAAG
AGAGTGTGCTTGCTCCACAAAAGGATGGTAGAGGTATTGTGCCCGTAGGA
TGTGACTTCAAACTAGCGTATGGCCGCTCTCTAGTTGTCATTCATTAGCT
CTCTGAGTACAACAATCAACAGTTGTCATGATCCGCTTGTTCGCTTTGCG
AAATATTAGCTATACCATCGTGCCACTGCATGGTCGTACTTGCGAACAGG
ATGCGGTACAGCAAGAACTTTCCTATTTCCCTGCACTGCTGAGGTGCCTT
GCAGCATTTGCTTCGCCTCCCCGACCTAGCAGCACCCGAGATGAGCTGCT
CTTGGCTACTGGGTAAGGAATAACCGGTACTTTGCTCTCATAAGTATTAC
TATTAAGGAACACCGAAGGCAAGATCATGGGACTGAAAGCAATGTAGAGT
ATGGGTATTCGTTAAAAAACGTGTTCTGCACACAAAGTATCCAGGCTCAG
GGTATCATACGATGGCGTGGCCCTTGTTTTTCGCAGATAATGGGTGATAA
TATTCACTGAAAAAGTCCCAGATACTAGTTATGTGCGTATTTACCCGCAT
CCTTGAAATCGAACAGGCATCCTTCCTCTGTCCCTTACGTAAAGTCCATT
GAATTAGTATAGGCAGGTAACCATCACCGTTTTGTTTTTTGTTGAAATCC
CACATGTTTTGGGGTTTGATATCCAAAATTTCACGAAAATTGGCAAAACC
TACCGGGAGCGCATGCGGCGCAAAAATAAAATGCCGATCGAAAAAAGGCC
ATCATTTGCGCCAGTCAAGAAAAGAAGAGAAAGGTGTTGCTGACTGCAAT
CTCAGCTGCTTCCCCCGTGGGCAATCTACTTTGGCTCGTCGGAAATGCCA
TCGCGCAACGGCGGCCCAGCGGCAGCTCTGGGCCCCGTTTGCCGCGTGAA
GGCGTGTTCATTAGCGAGTCCATTGTGTTTGTGTGCATGTGCGCGCTGGT
GGTTTGGCGACAAACCGACAAAAATGTCCAAAAACGGGTCAACTTTGACT
TTGAGCAGGAAATATTTAGGAACAAATGATCAGAATCAGAACTCGGAAAT
TTCTATGAGAATCGTCTCTTGTTCTTTGTTCTTTGTTGTAACTTTCCAAC
TATTCCATCTATAGCCTTTGTAAAAAAGAGATAAGAAGATATGATGTGAT
CTGCCGCCAAACTCAACCAACTTGACTTGGGGCACAGAGGAAGTACAGTT
ACACCAGACACAGTTGGTAGCTAGAAGGTTAGAAAGCGAGGGATGTCCGA
TCCCCTAAATGCACGCTGAGGCCTGTCGTCAAACCACATCATGCTCTTCA
CTGTGCATGGCATGATGAGTGCATGAAGCATTTTGAGGGCCGTGGGTGCC
TGCTGGAGGTTAGTGAGCAGTGTTGAGTGTTGTGCATATTTTTGATATGC
CTGGTTGCAGTTCAGGTTGAAGGATGTAAGTAAGGTTTTGCGACGGTACC
TGCAGTTAATAAGCCAATAAAGATCTTGTCACCGACATGGTGTAATACCC
GACAAAAAACTAATACGCCACCTGGAATGCTCACATGACTTGATCTTGAC
TGGCCCTACGGCATCTTCCCTCCTTCGTTTCTTCCTACCGTTTCCCGGTG
CTATTGGTTTTGTTTTGTTGTCATCTGTGTACATGATCCATAATATGTAT
ACAAACAGATGGTTCGATGAAGAGGGGCACCTTGATCGATTATCACGCGA
ACACCTCCGACATCTCATCCAGTCGTGCAACGTGATGCCAATCGCCAAGA
AGCTATCCTCCGTGGTCATGCCCAAGAGAGTGCTCGTATCTTGGCTAGAC
AAAGAAGCGGCGTGGATAAGGTGAATGTACGGATGGTGGTTCGCTTTTGT
GCCGGCTGTTCACGCTTGTCATCTGGCGTTTGACGTTTGACGTTGAGGTG
CAAGTCATGATTCGGCGTGCGTGTGAAGAGAATTTCAGGAAAGCGGGGAG
AGTGGCTATATATGGTGTGTTATCTGTCACCCTGTCGTGCAAAATGCAAT
CGGTCCATGTGACCCACATGATGTTGTACGATGCCTGCATAGCTTTGATC
ATGTATCACGTATAATATTATCAACAGGCCTAAGAGGAGTGAAAAGTGTG
TGTGCCTTTGTCTTCTGCGTACTATCGCATCGCGTGCTCCCATGTTTGTT
TTCGGTGCTCTTGATTTTCAACCGAGGTACATACATGCCTCTGCTGTTGC
TTCTGTACAGCTTTTCCAGCGGTGGATTACTGTTAAGAAACCTTCGCTGT
TGTGGCCACCCCCATGTTTGCTTGCAGTGAGGACGATCTGGCACTATTGG
AACTTCTGCGTGTTGACGGTTTTCTCAAATTGGAGAATAACACAGTACAA
GAGGAACCACCACTAGAGTCAGAGGGTATCACTACCAACGGTGGAGGTGG
AGTCGAGGCAATCTTTACTATTTCACCACAAGAGCTGCGCATATTATGCT
GGGAGAGGGGGTTACTAAGGTCGCAGCAGGAGGGGGCGGCCGGCGCTCTT
AGAACGGAGGGGCGGGGTGGAGACCAGTCGACGGCGGAAGCGTCGTCGAT
GCTTCTCCAAAGGTAACGTTATCGAAGCCCGTGTTTTTTCGGGACACACG
CCGGAGTGAAGTGTCTTTCATTTAGTAGTAATCATTTAATTTGACTATGG
CCGAAGTACGATACGAAGTTATTATAGTTGGCTCTTGCAACATGTAGGTT
TGAAGTGGTCGTAAATTAACAGTGAAACGTTCGGCCACGGCATGTAAGCG
GTCACTGGATCACTCGCCCATTTCTCACCGGGAGAGAAGTCAATTTTGGT
CATCATTATTGATGAATTTGATTGACAGCGCTAGCGTTGCTCTTTCTAAA
GTACTTCTCCTGGGACAAGGATAACATTTAATGTAATTAGCTTCTTGCTA
GTTAGTGAGTGTACTTAAACTGTTGAGTTGACCTGCCTATGCGTTCTTCG
TTTCGCTTGGTAAGAAGCTATACGGGAATGTATGTATGATACCTCGGGGT
AAGTTTCACTTGCTTGCCTTCTTTTTGCGTCATGGTTTTGTTGTGAAAAT
ATGAACACGAACAGGTTGGAGGCATGGCTCTCCCTCTACGCCGAGGATGA
CATAACAAGAACTATAGGTGGGAAGCTCCACACTAAATGGCCAAGCTATC
AGCAACCGCCTCGTCGCGTCCCGGCTTCTATGGTGTTGCATGCGCCTGCT
TTGCTAAGGCTTACCGGCTCTGGCTCCTTTAGCTAGGAACGTAGTCCTCC
ACGAGTGATCTTGGTCTTGACTTGACCACGATTGATACTGTACGAGTGGT
AACTTTCTTTTAAAGTTTGAGTAGGCGCTGGTGTTGAAAATTTTATTGTC
TTGCCGCATCTGTATACACGGGGATTATGCACTAGGCCCGGTCGAGAAAA
TTTGCGTTCAACTGAGTCAGAAGACTTTGTGACACGGGGATATCTGTTGT
ATCTCGTTTTAGCGGAACGCATTTGAGGGTAGTGCTAGTGGTGAATACCC
TGGGATAAAGCTACAATAAATAGAGAGTGCGCGCAATATCTTTCGATTTA
CCATAGTGATCGATCTAGTATAGTCAATACCCAAGAAGTGCCCAAGAAGG
GTAACCGCTTAGGATCCCGCAGGACGATCTGTTTTTAACCTGCATCACCG
ATCGCTAAGCTAGCACTCAGCTCTGACTGATTCATCAGCTTAGTTAGTGG
TCGGTCTACATTGCGTTTAAACACCCGCTGTGGTTGGATTACTCGCCACC
GTGTACGCTTGTCGCTACCATCAAGTAGATAGACTCGAGCAGTTTGGACC
CAGCCCTTACCTTAGTGTGTGATGTGCGCCCCGGCGTGTGTCCGATACGA
TCCCGTCGATAGCATTTGAGTTAGCTCGACGTATGAATAAGCTGGTTAGA
TAGTCTAAAACATTGCCAATTTGATACGTTGATTTCTTTCCGTTTTGGGA
GGGATACAGTACGTCCGGGCCTCCCGCCAGGAAGTATATTTAATGAGAAC
GGTGCTTGCTCTCTTCTCTTTTATTCCTGGTTCATTACGGTTGTTGTCTG
GGAATTTTCCGGACTTCAGTTAAGAGTTTATGGCCGAGCTTGGATGATAA
CCATATTTTTATTCAGTTGTCCATTTCTTTGTTTGAAGTGTTCCTTGGCA
GAGAGAAAGAGATTAGGTATACGTCGTTTCCTTTTTGGTCCTTTTTTTTC
AAAGGAGAAACCTGATTGGTGGACAAATCTTGGTTAACGTGTGACGTCAT
CCACGGTCAAGATGTAACCTTTGGATCATTTCTTTCTTTTTTGTAGGAAA
AAAAACAACAAATCCATAATTAGGCACCGTTCCTCTCTGTCGACTGACAG
TAGATATGTCTGGAGGTATGGGGTTGATGGATCTGTGAACCGGGGTTATC
TGTCCGCTTGGTATGACCAGGAGCACTTTTTATTTTCTCTTGGGGTATTC
TTTAAGTTGTAACGACTACCTTTTGGCATCGGTACACATGTCCTCTTGTC
TGTCTAGCGTGATGACGTCGTTAGCTAAACGTTGTAATGTATTATTCTCC
AAGTACGGTATTCGGGGCTACATGGTAGGGCTAATTTGGGTTTAGTATTC
CTGCAGGGCGAGACACACGATGTCTATTCAATTGAAATCGTTATTTATTT
ATTCGTTCATGTATTTATTTTTTTATGGAGATCACTCGCATAGTGTTGGT
ATACTTATTTGAAGGGGAAAAAAGGTGACCATTGTTCAGTTTAGTCTGAT
GAAGTCATGAAGTCGGAATAATGAATTGCCGAATTAAAAGACCCCCAAGT
GTTTGGATTTTGTGGCGTTGTTCCCGCTATACCTTGCTTGTTTATTTGTC
CACGCACCATGCAAGTGCAGATGCAGAGCATGTGACACCGTTGTCTTCGT
GTGATGAGGATGCTGAACCTGCAGCCTCTCGGTACCGTAGCGATGCTTCT
CTTTTTGGGGTCTGCCGTGTAACCTCTTCATGTGTTCAAATGCAGAAGAA
ACACGCATTGACCTCAATCTATTCTATAAAACACTAGGAGAGACACGGCT
AAACCCGTGCAATTCGTATACAAGGAGTTGTCCTCGACCCAGGGACTCGC
TGCGGTCGAAATGGCTCCAAGAACGACTTGAGTAGAGGGCTGGAAAAATG
TTCCAAAATAATAATGACATTGACAACAACGACCTTACTCTTTAGTCATC
GTATTCGTTGTATTCATGATTGATTGTGGTCCGGATGCCTTCCTTGTCCC
GCAGTGCTTGTTGTATGTAATTACATTCAATAAGAGAGAAAGTGTAGCAT
ACTTTCGGGTTGAAGACGAATTGGTGTAGTGACAGTACTGGATGGATGGC
GGTG
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Coding sequence (CDS) from alignment at H-paniculata_contig7740:3878..11031+

>mRNA_H-paniculata_contig7740.15763.1 ID=mRNA_H-paniculata_contig7740.15763.1|Name=mRNA_H-paniculata_contig7740.15763.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2946bp|location=Sequence derived from alignment at H-paniculata_contig7740:3878..11031+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACTATTAGTATGGTCATGGCAGGGGGGGCTAGATTTGGCAGCAGGAA
AGGCAAGGCCATGTTGGCGCTATATGGCTACGCGATATTATCAAGGAGAT
GTCACCGTGCAATGGCGCACTCGGTGATTTTGGGGCCTTTGTATACGGGG
GATTTACGGCCGTTCTCCTCCAATAGCACTACCGCGGCAAGCAAACCTGA
TGGGGTCGCTGAAGTTAGTGCTGTGCATGACAGAGTTGGTGCTGCTTTCA
AGATCAACGGCGGTGGGGTTGACCCAAAAGTAGCAGCAGAATATCGACAA
CATTCTAGAGGTTCCGAGCAGGCAGCAAAGGCAAAGGGACCAACAAAAGG
GGAAGAGGCAGAAAATACCAAGAGTTGGGAGACGAATGACCGTAATAGTA
CGAGTAGTGACGCGGAACTGGCTGTGCAGCAGAAAGGGGCGTGGAAGAGG
TTTGTGGCAACTTTCATGGACTTCGCGAACGCAGCGAAGCTGCTCTGGGC
TGAGTATCAGCTCGCTGGAAAGGCAAAAGCCAGACTGGAACAAGGGTACA
CGCTATCCTGGCGGGAGCGACGTTTAGTCCGAGGGATGACTATTAGTATG
GTCATGGCAGGGGGGGCTAGATTTGGCAGCAGGAAAGGCAAGGCCATGTT
GGCGCTATATGGCTACGCGATATTATCAAGGAGATGTCACCGTGCAATGG
CGCACTCGGTGATTTTGGGGCCTTTGTATACGGGGGATTTACGGCCGTTC
TCCTCCAATAGCACTACCGCGGCAAGCAAACCTGATGGGGTCGCTGAAGT
TAGTGCTGTGCATGACAGAGTTGGTGCTGCTTTCAAGATCAACGGCGGTG
GGGTTGACCCAAAAGTAGCAGCAGAATATCGACAACATTCTAGAGGTTCC
GAGCAGGCAGCAAAGGCAAAGGGACCAACAAAAGGGGAAGAGGCAGAAAA
TACCAAGAGTTGGGAGACGAATGACCGTAATAGTACGAGTAGTGACGCGG
AACTGGCTGTGCAGCAGAAAGGGGCGTGGAAGAGGTTTGTGGCAACTTTC
ATGGACTTCGCGAACGCAGCGAAGCTGCTCTGGGCTGAGTATCAGCTCGC
TGGAAAGGCAAAAGCCAGACTGGAACAAGGGTACACGCTATCCTGGCGGG
AGCGACGTTTAGTCCGAGGGGTCCCACGAGACTTGTGGAAGGCTGGGCCC
ATTCTGTTGGTCTTCGGGATTCCCATCGTAGGCTACATTGCACCTATTGT
GGGCGTGCTATACCCCAAAAACCTGCTGCCAAGACAATTCTGGAGCTCGG
CTCAACACTTGGAGTATATGCTGCAGGTCCCACGAGACTTGTGGAAGGCT
GGGCCCATTCTGTTGGTCTTCGGGATTCCCATCGTAGGCTACATTGCACC
TATTGTGGGCGTGCTATACCCCAAAAACCTGCTGCCAAGACAATTCTGGA
GCTCGGCTCAACACTTGGAGTATATGCTGCAGGATGCGGTACAGCAAGAA
CTTTCCTATTTCCCTGCACTGCTGAGGTGCCTTGCAGCATTTGCTTCGCC
TCCCCGACCTAGCAGCACCCGAGATGAGCTGCTCTTGGCTACTGGGATGC
GGTACAGCAAGAACTTTCCTATTTCCCTGCACTGCTGAGGTGCCTTGCAG
CATTTGCTTCGCCTCCCCGACCTAGCAGCACCCGAGATGAGCTGCTCTTG
GCTACTGGATGGTTCGATGAAGAGGGGCACCTTGATCGATTATCACGCGA
ACACCTCCGACATCTCATCCAGTCGTGCAACGTGATGCCAATCGCCAAGA
AGCTATCCTCCGTGGTCATGCCCAAGAGAGTGCTCGTATCTTGGCTAGAC
AAAGAAGCGGCGTGGATAAGATGGTTCGATGAAGAGGGGCACCTTGATCG
ATTATCACGCGAACACCTCCGACATCTCATCCAGTCGTGCAACGTGATGC
CAATCGCCAAGAAGCTATCCTCCGTGGTCATGCCCAAGAGAGTGCTCGTA
TCTTGGCTAGACAAAGAAGCGGCGTGGATAAGTGAGGACGATCTGGCACT
ATTGGAACTTCTGCGTGTTGACGGTTTTCTCAAATTGGAGAATAACACAG
TACAAGAGGAACCACCACTAGAGTCAGAGGGTATCACTACCAACGGTGGA
GGTGGAGTCGAGGCAATCTTTACTATTTCACCACAAGAGCTGCGCATATT
ATGCTGGGAGAGGGGGTTACTAAGGTCGCAGCAGGAGGGGGCGGCCGGCG
CTCTTAGAACGGAGGGGCGGGGTGGAGACCAGTCGACGGCGGAAGCGTCG
TCGATGCTTCTCCAAAGTGAGGACGATCTGGCACTATTGGAACTTCTGCG
TGTTGACGGTTTTCTCAAATTGGAGAATAACACAGTACAAGAGGAACCAC
CACTAGAGTCAGAGGGTATCACTACCAACGGTGGAGGTGGAGTCGAGGCA
ATCTTTACTATTTCACCACAAGAGCTGCGCATATTATGCTGGGAGAGGGG
GTTACTAAGGTCGCAGCAGGAGGGGGCGGCCGGCGCTCTTAGAACGGAGG
GGCGGGGTGGAGACCAGTCGACGGCGGAAGCGTCGTCGATGCTTCTCCAA
AGGTTGGAGGCATGGCTCTCCCTCTACGCCGAGGATGACATAACAAGAAC
TATAGGTGGGAAGCTCCACACTAAATGGCCAAGCTATCAGCAACCGCCTC
GTCGCGTCCCGGCTTCTATGGTGTTGCATGCGCCTGCTTTGCTAAGGCTT
ACCGGCTCTGGCTCCTTTAGCTAGGTTGGAGGCATGGCTCTCCCTCTACG
CCGAGGATGACATAACAAGAACTATAGGTGGGAAGCTCCACACTAAATGG
CCAAGCTATCAGCAACCGCCTCGTCGCGTCCCGGCTTCTATGGTGTTGCA
TGCGCCTGCTTTGCTAAGGCTTACCGGCTCTGGCTCCTTTAGCTAG
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