mRNA_H-paniculata_contig7736.15758.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig7736.15758.1
Unique NamemRNA_H-paniculata_contig7736.15758.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig7736.15758.1 vs. uniprot
Match: D7FJI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJI2_ECTSI)

HSP 1 Score: 268 bits (686), Expect = 4.060e-81
Identity = 196/326 (60.12%), Postives = 215/326 (65.95%), Query Frame = 1 
Query:    1 QYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGLADIKAKIEHLGLGGATVDLGCGSVDAQPSEGDGVLLMVTGSITITDSDPRQFVQTFFLARQHQDNDRHNYFVRNDIFRFLDVLPEVVQGALRAREGDEDEGVPRSA--PAASNS---SVAEEEPVTEGESMQQQSNQETVPVAAPQAVSPGLPPTVPTAAPSPMLSPQTVAPASESQVAVGAAVDAV----------------AVASAASLDNNGSVVKPSPAEDQVGAIPPSTVPXXXXXXXXXXXXXXXXXXXXXXXXXXRMGPIAPMTYASLAKSWASQAAVGG 915
            QYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGL DIKAKI+HLGLGGATVDLGCGSVDAQPSEG GVLLMVTGSITI ++DPRQF QTFFLARQHQDNDRHNYFVRNDIFRFLDVLPEVVQ AL+AR+ +ED    RSA  PA  +S   SV EE   T   ++ Q   Q+T PV      SP     VP ++P  M +    AP SESQVA  A+ DA                 A A+ A LDN  +   P+        +PPS V               XXXXXXXXXXXX       MTYASLAKSWA+ AA  G
Sbjct:   20 QYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGLEDIKAKIKHLGLGGATVDLGCGSVDAQPSEGGGVLLMVTGSITIANTDPRQFCQTFFLARQHQDNDRHNYFVRNDIFRFLDVLPEVVQAALKARD-EEDGSTARSALPPAEESSKPESVGEE---TVAAAVTQVHVQDT-PVPQQTTASPVATAAVPESSPPAMAA--GAAPPSESQVA--ASTDAXXXXXXXXXXXXXXXXXAPAAVAGLDNGSADKTPA------AKVPPSPVGASTPAESTETAAAEXXXXXXXXXXXXXXXXXXXMTYASLAKSWATVAADSG 330
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BLAST of mRNA_H-paniculata_contig7736.15758.1 vs. uniprot
Match: A0A6H5L110_9PHAE (NTF2 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L110_9PHAE)

HSP 1 Score: 260 bits (664), Expect = 3.930e-80
Identity = 190/326 (58.28%), Postives = 208/326 (63.80%), Query Frame = 1 
Query:    1 QYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGLADIKAKIEHLGLGGATVDLGCGSVDAQPSEGDGVLLMVTGSITITDSDPRQFVQTFFLARQHQDNDRHNYFVRNDIFRFLDVLPEVVQGALRAREGDEDEGVPRSAPAASN---SSVAEEEPVTEGESMQQQSNQETVPVAAPQAVSPGLPPTVPTAAPSPMLSPQTVAPASESQVAVGAAVDAVAV---------------ASAASLDNNGSVVKPSPAEDQVGAIPPSTVPXXXXXXXXXXXXXXXXXXXXXXXXXXRMGPIAP---MTYASLAKSWASQAAVGG 915
            QYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGL DIKAKI+HLGLGGATVDLGCGSVDAQPSEG GVLLMVTGSITI ++DPRQF QTFFLARQHQDNDRHNYFVRNDIFRFLDVLPEVVQ AL+AR  DE++G    APA  +    SV EE   T   ++ Q   ++T   +APQ  +     T      SP       AP SESQVAV A  D                   A+ A LDN  +   P+        +PPS V               XXXXXXXXXXXX          MTYASLAKSWA+ AA  G
Sbjct:   20 QYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGLEDIKAKIKHLGLGGATVDLGCGSVDAQPSEGGGVLLMVTGSITIANTDPRQFCQTFFLARQHQDNDRHNYFVRNDIFRFLDVLPEVVQAALKAR--DEEDGSSALAPAEESLKPESVGEE---TVAAAVTQVHVRDT---SAPQQTTASPVATAAXXESSPPSMAAGAAPPSESQVAVPADADXXXXXXXXXXXXXXXXXXPAALAGLDNGSADRTPA------AKVPPSPVAASTPVESTEKAAAEXXXXXXXXXXXXXXXXXXXXXXMTYASLAKSWATVAADSG 331
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BLAST of mRNA_H-paniculata_contig7736.15758.1 vs. uniprot
Match: A0A835Z9L7_9STRA (NTF2 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9L7_9STRA)

HSP 1 Score: 172 bits (436), Expect = 4.230e-47
Identity = 84/132 (63.64%), Postives = 100/132 (75.76%), Query Frame = 1 
Query:    1 QYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGLADIKAKIEHLGLGGATVDLGCGSVDAQPSEGDGVLLMVTGSITITDSDPRQFVQTFFLARQHQDNDRHNYFVRNDIFRFLDVLPEVVQGALRA 396
            QYYG+VL  KP EL RFY ++STFCHA G+ +E+PV+GL +IKAKI  LGL  ATVDL CGSVDAQPS  DG++LMVTGSI +     RQF QTFFLA Q Q N RHNY V NDIFR LD +P+V++ A+ A
Sbjct:   22 QYYGQVLPNKPTELFRFYHEKSTFCHADGSSQEDPVTGLENIKAKILSLGLADATVDLDCGSVDAQPSVDDGIILMVTGSIKLQGQRLRQFAQTFFLALQLQKNGRHNYVVMNDIFRLLDTIPDVLKAAVDA 153
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BLAST of mRNA_H-paniculata_contig7736.15758.1 vs. uniprot
Match: A0A835YRG6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRG6_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.450e-43
Identity = 79/129 (61.24%), Postives = 97/129 (75.19%), Query Frame = 1 
Query:    4 YYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGLADIKAKIEHLGLGGATVDLGCGSVDAQPSEGDGVLLMVTGSITITDSDPRQFVQTFFLARQHQDNDRHNYFVRNDIFRFLDVLPEVVQGAL 390
            +YGEVL +KP+ELHRFY ++STFCHA G K+E+PV GL +IK KI  LGL  ATVDL CGSVD Q S+   +LLMVTG+IT+    PRQF QTF LA   Q + RHN+FV ND+FR LD +PEV++ AL
Sbjct:   20 FYGEVLPRKPLELHRFYSEQSTFCHAEGNKQEQPVMGLENIKEKIRGLGLADATVDLDCGSVDIQASQNGSILLMVTGAITLRGQAPRQFAQTFLLATHRQMDGRHNFFVLNDVFRLLDTIPEVLEAAL 148
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BLAST of mRNA_H-paniculata_contig7736.15758.1 vs. uniprot
Match: A0A485LI37_9STRA (Aste57867_20882 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LI37_9STRA)

HSP 1 Score: 116 bits (290), Expect = 7.510e-25
Identity = 63/121 (52.07%), Postives = 80/121 (66.12%), Query Frame = 1 
Query:    1 QYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGLADIKAKIEHLGLGGATVDLGCGSVDAQPSEGDGVLLMVTGSITITDSDPRQFVQTFFLARQHQDNDRHNYFVRNDIFRFLDV 363
            QYY  +L++ P +LHRFYKDESTF H SG++ EE VSG A I + I      GA V L  GS+D Q S+  GV+++VTG IT+ +S P  FVQTFFLA QH     + YFV ND+ RFL +
Sbjct:   21 QYYS-LLTESPDKLHRFYKDESTFSHGSGSQLEESVSGQASINSTILKKNYYGAVVQLDHGSIDCQASQAGGVVVLVTGVITLQNSAPAHFVQTFFLAVQH-----NGYFVLNDVLRFLHI 135
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BLAST of mRNA_H-paniculata_contig7736.15758.1 vs. uniprot
Match: A0A6G0XNH0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XNH0_9STRA)

HSP 1 Score: 114 bits (284), Expect = 4.110e-24
Identity = 86/223 (38.57%), Postives = 118/223 (52.91%), Query Frame = 1 
Query:    1 QYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGLADIKAKIEHLGLGGATVDLGCGSVDAQPSEGDGVLLMVTGSITITDSDPRQFVQTFFLARQHQDNDRHNYFVRNDIFRFLDVLPEVVQGALRAREGDEDEGVPRSAPAASNSSVAEEEPVTEGESMQQQSNQETVPVAAPQAVSPGLPPT-----VPTAAPSPMLSPQTVAPASESQVAVGAAV 654
            QYY  +L++ P  LHRFYKDESTF H SG++ EE VSG A I + I      GA V L  GS+D Q S+  GV+++VTG IT+ +S P  FVQTFFLA Q +      +FV ND+ RFL++  +      +A        VP  +P+ +  + A   P T    + Q    +++P       SP LPPT      P      +LSP+   PAS  + A  +AV
Sbjct:   21 QYYS-LLTESPETLHRFYKDESTFSHGSGSQPEESVSGQASINSTILKKRYSGAVVQLDHGSIDCQASQAGGVVVLVTGVITLQNSAPTHFVQTFFLAVQEK-----GFFVLNDVLRFLNIPTKPASPVKKA--------VPAQSPSKATQTQATATPTTP---VVQSPKPKSIP-------SPPLPPTKAPLLTPVETKEAVLSPKRAPPASPKKPATPSAV 219
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BLAST of mRNA_H-paniculata_contig7736.15758.1 vs. uniprot
Match: A0A484DSX6_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DSX6_BRELC)

HSP 1 Score: 111 bits (278), Expect = 2.790e-23
Identity = 62/121 (51.24%), Postives = 79/121 (65.29%), Query Frame = 1 
Query:    1 QYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGLADIKAKIEHLGLGGATVDLGCGSVDAQPSEGDGVLLMVTGSITITDSD-PRQFVQTFFLARQHQDNDRHNYFVRNDIFRFLD 360
            QYY   L+K+P  LHRFYK ES +CH  G+  EEP++G   I  +I   G  GA VDL  GS+D Q S+GDGVL++VTG +T+ +S  P+ FVQTFFLA Q +      YFV ND  RFL+
Sbjct:   28 QYY-HFLAKEPQSLHRFYKAESRWCHGVGSHMEEPIAGQRAINDQILKRGYAGARVDLDAGSIDCQNSQGDGVLVLVTGVMTLRESPTPKPFVQTFFLAVQPK-----GYFVLNDCLRFLE 142
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BLAST of mRNA_H-paniculata_contig7736.15758.1 vs. uniprot
Match: A0A7S3Y115_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y115_HETAK)

HSP 1 Score: 104 bits (259), Expect = 3.530e-23
Identity = 62/125 (49.60%), Postives = 80/125 (64.00%), Query Frame = 1 
Query:    4 YYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGLADIKAKIEHLGLGGATVDLGCGSVDAQPSEGDGVLLMVTGSITI-TDSDPRQ-FVQTFFLA-----RQHQDNDRHNYFVRNDIFRFL 357
            +Y  VLSKKP EL RFYK+ES+F   +  +  EPV+G+  IK KI  LGL GA V++G GSVDAQ S   GV+++VTG+I + T   P Q F QTFFLA     +Q +     +YFV ND  RF+
Sbjct:   18 HYYRVLSKKPAELFRFYKEESSFTFGAPGEAAEPVTGIEAIKTKITGLGLEGAKVEVGQGSVDAQASRDGGVVMLVTGTIALATGQQPAQAFAQTFFLAPQVVVQQGRTAPVPSYFVLNDTLRFV 142
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BLAST of mRNA_H-paniculata_contig7736.15758.1 vs. uniprot
Match: A0A0W8CRK0_PHYNI (NTF2 domain-containing protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CRK0_PHYNI)

HSP 1 Score: 108 bits (269), Expect = 7.460e-23
Identity = 61/122 (50.00%), Postives = 77/122 (63.11%), Query Frame = 1 
Query:    1 QYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGLADIKAKIEHLGLGGATVDLGCGSVDAQPSEGDGVLLMVTGSITITDSD-PRQFVQTFFLARQHQDNDRHNYFVRNDIFRFLDV 363
            QYY   L+K+P  LHRFYK ES +CH  G+  EEP++G   I  +I   G  GA VDL  GS+D Q S G GVL++VTG +T+  S  P+ FVQTFFLA Q +      YFV ND  RFL++
Sbjct:   62 QYY-HFLAKEPQSLHRFYKAESRWCHGLGSHMEEPIAGQRAINDQILKRGYAGARVDLDAGSIDCQNSHGGGVLVLVTGVMTLRSSPTPKPFVQTFFLAVQPK-----GYFVLNDCLRFLEL 177
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BLAST of mRNA_H-paniculata_contig7736.15758.1 vs. uniprot
Match: A0A0P1AP85_PLAHL (Ras gtpase-activating protein-binding n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AP85_PLAHL)

HSP 1 Score: 108 bits (269), Expect = 4.340e-22
Identity = 59/122 (48.36%), Postives = 79/122 (64.75%), Query Frame = 1 
Query:    1 QYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGLADIKAKIEHLGLGGATVDLGCGSVDAQPSEGDGVLLMVTGSITITDSD-PRQFVQTFFLARQHQDNDRHNYFVRNDIFRFLDV 363
            QYY   L+K+P  +HRFYK ES +CH  G+  EEP++G   I  +I   G  GA VDL  GS+D Q S+G+GVL++VTG + + +S  P+ FVQTFFLA Q +      YFV ND  RFL++
Sbjct:   31 QYY-HFLAKEPQSMHRFYKAESRWCHGVGSHMEEPIAGQRAINEQILKRGYAGARVDLDAGSIDCQNSQGNGVLVLVTGVMVLRESPTPKPFVQTFFLAVQPK-----GYFVLNDCLRFLEL 146
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7736.15758.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJI2_ECTSI4.060e-8160.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L110_9PHAE3.930e-8058.28NTF2 domain-containing protein (Fragment) n=1 Tax=... [more]
A0A835Z9L7_9STRA4.230e-4763.64NTF2 domain-containing protein (Fragment) n=1 Tax=... [more]
A0A835YRG6_9STRA1.450e-4361.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A485LI37_9STRA7.510e-2552.07Aste57867_20882 protein n=1 Tax=Aphanomyces stella... [more]
A0A6G0XNH0_9STRA4.110e-2438.57Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A484DSX6_BRELC2.790e-2351.24Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A7S3Y115_HETAK3.530e-2349.60Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A0W8CRK0_PHYNI7.460e-2350.00NTF2 domain-containing protein n=1 Tax=Phytophthor... [more]
A0A0P1AP85_PLAHL4.340e-2248.36Ras gtpase-activating protein-binding n=1 Tax=Plas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7736contigH-paniculata_contig7736:131..5616 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score273.1
Seed ortholog evalue2e-70
Seed eggNOG ortholog2880.D7FJI2
Preferred nameG3BP2
KEGG koko:K14050,ko:K14328,ko:K17265,ko:K19718
KEGG Pathwayko03013,ko03015,ko04139,map03013,map03015,map04139
KEGG ModuleM00430
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000375,GO:0000377,GO:0000398,GO:0000932,GO:0001654,GO:0001736,GO:0001738,GO:0001745,GO:0001751,GO:0001752,GO:0001754,GO:0002009,GO:0002064,GO:0002065,GO:0002066,GO:0003002,GO:0003006,GO:0003674,GO:0003676,GO:0003678,GO:0003723,GO:0003724,GO:0003729,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006139,GO:0006355,GO:0006396,GO:0006397,GO:0006464,GO:0006508,GO:0006725,GO:0006807,GO:0006914,GO:0006996,GO:0007154,GO:0007163,GO:0007164,GO:0007165,GO:0007253,GO:0007264,GO:0007265,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007389,GO:0007399,GO:0007423,GO:0008026,GO:0008069,GO:0008094,GO:0008104,GO:0008150,GO:0008152,GO:0008186,GO:0008380,GO:0009056,GO:0009653,GO:0009798,GO:0009887,GO:0009888,GO:0009889,GO:0009893,GO:0009950,GO:0009953,GO:0009966,GO:0009968,GO:0009987,GO:0010467,GO:0010468,GO:0010494,GO:0010556,GO:0010604,GO:0010628,GO:0010646,GO:0010648,GO:0016043,GO:0016070,GO:0016071,GO:0016236,GO:0016318,GO:0016333,GO:0016334,GO:0016462,GO:0016579,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019538,GO:0019953,GO:0022008,GO:0022412,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0023051,GO:0023052,GO:0023057,GO:0030111,GO:0030154,GO:0030159,GO:0030178,GO:0030182,GO:0030707,GO:0030855,GO:0031323,GO:0031326,GO:0032088,GO:0032386,GO:0032392,GO:0032501,GO:0032502,GO:0032504,GO:0032508,GO:0032879,GO:0032947,GO:0032991,GO:0033036,GO:0034063,GO:0034517,GO:0034622,GO:0034641,GO:0035556,GO:0035770,GO:0035973,GO:0036211,GO:0036464,GO:0040008,GO:0042067,GO:0042623,GO:0042706,GO:0042994,GO:0043021,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0043433,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0044877,GO:0045165,GO:0045185,GO:0045570,GO:0045571,GO:0045926,GO:0046483,GO:0046530,GO:0046552,GO:0046620,GO:0046621,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048592,GO:0048609,GO:0048638,GO:0048640,GO:0048663,GO:0048699,GO:0048729,GO:0048731,GO:0048749,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051049,GO:0051090,GO:0051093,GO:0051171,GO:0051179,GO:0051220,GO:0051235,GO:0051239,GO:0051241,GO:0051252,GO:0051276,GO:0051704,GO:0051716,GO:0060255,GO:0060341,GO:0060429,GO:0060627,GO:0060628,GO:0060828,GO:0061912,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070035,GO:0070646,GO:0070647,GO:0070925,GO:0071103,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090090,GO:0090304,GO:0090596,GO:0097159,GO:0140097,GO:0140098,GO:1901360,GO:1901363,GO:1901564,GO:1903506,GO:1905538,GO:1990861,GO:1990904,GO:2000026,GO:2000112,GO:2000156,GO:2001141
EggNOG free text desc.ras GTPase-activating protein-binding protein
EggNOG OGsKOG0116@1,KOG0116@2759
EC2.5.1.60,3.6.4.12,3.6.4.13
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01006,ko03019,ko04131,ko04147
Exons6
Model size1179
Cds size1179
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7736.15758.1prot_H-paniculata_contig7736.15758.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig7736 131..5616 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930960.2563806-CDS-H-paniculata_contig7736:130..5831622930960.2563806-CDS-H-paniculata_contig7736:130..583Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7736 131..583 -
1691481528.4746594-CDS-H-paniculata_contig7736:130..5831691481528.4746594-CDS-H-paniculata_contig7736:130..583Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7736 131..583 -
1622930960.2915716-CDS-H-paniculata_contig7736:1031..12171622930960.2915716-CDS-H-paniculata_contig7736:1031..1217Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7736 1032..1217 -
1691481528.4905396-CDS-H-paniculata_contig7736:1031..12171691481528.4905396-CDS-H-paniculata_contig7736:1031..1217Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7736 1032..1217 -
1622930960.3296735-CDS-H-paniculata_contig7736:2997..31561622930960.3296735-CDS-H-paniculata_contig7736:2997..3156Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7736 2998..3156 -
1691481528.5010579-CDS-H-paniculata_contig7736:2997..31561691481528.5010579-CDS-H-paniculata_contig7736:2997..3156Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7736 2998..3156 -
1622930960.3582976-CDS-H-paniculata_contig7736:4271..44411622930960.3582976-CDS-H-paniculata_contig7736:4271..4441Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7736 4272..4441 -
1691481528.5111969-CDS-H-paniculata_contig7736:4271..44411691481528.5111969-CDS-H-paniculata_contig7736:4271..4441Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7736 4272..4441 -
1622930960.3940659-CDS-H-paniculata_contig7736:4860..49721622930960.3940659-CDS-H-paniculata_contig7736:4860..4972Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7736 4861..4972 -
1691481528.5206344-CDS-H-paniculata_contig7736:4860..49721691481528.5206344-CDS-H-paniculata_contig7736:4860..4972Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7736 4861..4972 -
1622930960.4442513-CDS-H-paniculata_contig7736:5517..56161622930960.4442513-CDS-H-paniculata_contig7736:5517..5616Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7736 5518..5616 -
1691481528.5294993-CDS-H-paniculata_contig7736:5517..56161691481528.5294993-CDS-H-paniculata_contig7736:5517..5616Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7736 5518..5616 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig7736.15758.1

>prot_H-paniculata_contig7736.15758.1 ID=prot_H-paniculata_contig7736.15758.1|Name=mRNA_H-paniculata_contig7736.15758.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=393bp
QYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGLADIKAKIEHLG
LGGATVDLGCGSVDAQPSEGDGVLLMVTGSITITDSDPRQFVQTFFLARQ
HQDNDRHNYFVRNDIFRFLDVLPEVVQGALRAREGDEDEGVPRSAPAASN
SSVAEEEPVTEGESMQQQSNQETVPVAAPQAVSPGLPPTVPTAAPSPMLS
PQTVAPASESQVAVGAAVDAVAVASAASLDNNGSVVKPSPAEDQVGAIPP
STVPPASALPQPAAAAPTPIPVAASAPAPARMGPIAPMTYASLAKSWASQ
AAVGGEAAAPSLGVAGGAPASSAGAAAAAGAGGVAGGGGGGVSGNGAPPA
AAAAGVSNGSWGMPDAVGGSGGGGGLGSGVGDSVMSVSLGQQA
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mRNA from alignment at H-paniculata_contig7736:131..5616-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig7736.15758.1 ID=mRNA_H-paniculata_contig7736.15758.1|Name=mRNA_H-paniculata_contig7736.15758.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5486bp|location=Sequence derived from alignment at H-paniculata_contig7736:131..5616- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGTATTACGGAGAGGTTCTTTCGAAGAAGCCCGTGGAGCTGCACCGTTT
CTACAAAGATGAAAGTACTTTTTGCCACGCCTCCGGCACCAAAGAAGAGG
TTTGTCTGGTTTGACCCGTTTCAGGTACCCCTTTTCTTTGTTTTTTTTTC
TTTTAACTCTGCACTCCCCTGTCAACCCCTCTGGTGTTTTCTGGGGCGGG
GGGGGGGGGTTGTTGCATCACATTAGTACGCAGCATCCTTCTGAGCTTGC
CGGTAGAGTGGGAAGAGATACTTGGATATAGTGCATTGCGCTCGTTGAAG
ATATATTCGCTTTTACTCCCAAATAGCTTCCTCCTGCTGTTGGGAGTCTT
GCTTGCGAGTTGCACACTCTGAACGTGGCTTGTAATTTGCAGAGATTTAA
AAAACCCATCTATGAAGTTCTCTTCGTTGATATTCGGGTGCTGGCGAAAA
AACATTTATTACCGATGCTTCCATATTTGAGAGTATTTTACCTCGTTTTT
GGGTTTTGGAAATTCATCGTCTTCATTGACGTTCGCCCGAGGTGTGATCG
CCTTGTACTTTTTATTTTATTTTATAATCGGCAAGTATTCCAGAACTTTT
GAGTCTGACTGACAAGTAACACGTTAACCAACGCTTTTCCACAGGAACCT
GTTTCTGGTCTAGCTGATATCAAGGCAAAGATCGAACACCTTGGTCTTGG
AGGCGCCACTGTGGACCTCGGCTGCGGATCCGTCGATGCGCAGCCGTCCG
AGGGAGGTGAGAGTTATACCGTATATATATATATATATAAATAAGTGTAT
GCTATTTTTTTCTTTGGGTATATTGCTACCTATTATCGCCTTGAAAAATG
TTGTTCTCGTCGTTGTCTGGTATCGTTGTTTTCTTGTTCTGTTTTGTGAA
CTCTTTTATGCTGTTATTCTGCGTTCACGTTTTGTTTGTTTGTTTCGATA
TTTGGCGTTTTGTTCGTTAGCTATCTTGTTTATTATTTCTGATTGCCGTA
CTGCTATTATGTTGATTGGTGTCATTGCTCCTCGTTCCGTCCTGTTGCAG
TTCCAGCTCTTTATTATTATTATTGTTGCCATCATTATTTTTTTTGTGTG
TTGAACTGTGTTTAACTTGTCACTTTTGTGGTTTGTGTGTGTGTGTGTGT
TCTGATTGTTGTGCATACGTTGCAGATGGCGTGCTTCTGATGGTGACCGG
ATCTATCACCATCACCGACAGTGATCCTCGTCAGTTCGTGCAGACTTTTT
TCCTGGCAAGACAACACCAGGATAACGACAGACACAACTACTTCGTGCGC
AATGACATCTTTCGCTTCCTTGACGTCTTGCCCGAGGTTGTTCAGGTGCG
CCGTACAGCACACGACAGCACTTTACTCTTTTGATGCTGGTTCCTTGTAA
AGTCTCTCCTTCGTCCTCGCGTCGGAAAATACTCTCAAACCGCTTTCCGA
GTTTTCGGTTGCGGCAAACACGTTCGACATGAGCAGAGGAATAACAGAGC
TGTTCCGAATCAATGATTCAAGCTAGTGCTGCATGTTTTTCTCGGTAAAA
ATAAAAGAGGAAACACGAACGTTCGCATTAAAAATGGGCAAATGGGATTT
TTTTGTTTTGTTTTGTTTTTTCTCTAGTGTCGATATAAATTGAGAAACGG
TGGGAAATGGAATGTGTAAAAATTCATTATTTGTGCTAATCCTTAAACCA
TTGGTGATCTAAAAAGAGGCGCGATCACTAAGGTGTAATTTTGATTCATA
CATTCGCATTTTACATTTTTTTTTCTGCTACTCGTAAAAAGCATCGTCAA
ATTCGCAAAGATTTCTCTTTTGCTACTTTTTCCTGTTTTTGCTAGTGTTG
TATGGTTTTTCGAGAAACAAAGCAAAAGCAGATATTCGCATAAAAAAATT
ACAACAGCTTGAAAATGACTGGATTTTTTTTATTTTCGCCACTGGTGTGC
CATTAAGAAATCTTGACATATGGAAAATAACCAGAATCCGTACAAAAAGC
GTTCTCTTCACCCATTCGGAAGAAAAAAAGAGAAAGTGAAGCATTGTCGT
CGTGCAGTTCTAGTGTGAACGATGTCTTTTTTTCTTTTTTTTTTCAGCTC
GTGAAACCGTGGAGAAAAGATTGTTTGACCAAATTATACCAATTCTGCGG
GAGTTTAAATCGTTTCTTTTAGTTGTGAGAACATTGGTTGACTTAGAGAC
CTTTTTGTTTTCTCTTTTTTAATTATTTTAATGAAAGTTTAACTGAAAGG
AAATATAACTTGTGTAAATATGAAGTTTCGAAGGCCAGGCGGCACAATCG
AACGTGTTTGAGTACACGAGAAAATGGTCGGCATGTGAGGAGTCACTTTA
TTTTTTTATCATATTCCTTGGTTCTGTTTTTGGACTCTTATACTTTGGGC
TCCATGTGTTTTTCCGCTTGTTCGTCATGTATGTATGTCTGCATGCATCT
GTTGCCACAGGGTGCCTTGAGAGCTCGCGAGGGCGATGAAGACGAAGGTG
TTCCTCGCTCTGCTCCAGCAGCTAGTAACTCTAGTGTAGCTGAGGAAGAG
CCTGTGACCGAAGGTGAAAGTATGCAACAGCAGTCGAACCAAGAAACGGT
CCCTGTGGCGGCCCCTCAGGTAAGGGGAACTTGTGTGACGAAGTTTCTGT
TGGATTTGTTGGATTCGGTCTGGTTCGATTTGGGTCGAGTTGGTTCAAGT
TGGCTGTGTGTATACGCAACGTGAAAATACGGACTCCATAGCCTGAACAT
GATGGGGATCCACAGGTCCATGCAACCGAAGTCGTACATGAAGACCTGTC
ACCGATGTGGTGTTGTTACTGGAGTAAGCTTGTAATGTACTCTGTATATT
CCTTACAGGTCGTGCGATATCTTTTCATGTGTACGCACAACACACACGCG
AGTGATACGGTGGTACTCCCTGCTGAAGATCGTTAATGGTAGTCCATTTA
GTGGCTGTTGAGAGGGGTGCGAGGTGTCCTCGTGCTTGATCGTGATGAGG
GCAAGGTGTGTGTCATGTGAGTGGCTAAGCAGCGTATCCACCCGTTCTAG
TCTATTCGAAATTCACTTGATCTGGTTGGTACGTGTGGTGGGTTGTGGAT
GGGTCGTAGCGGTGGTAATGAGGGAGTAAGCATCTCTTCACGTAGCATGG
TTTAGTCTAATTTTTAATAGTGGGATCAACTGAAAAGACCCCAGGGTGTG
GACTAGCGCTTCGAAATACGAGTACACTACGTACAGAACTGTATATTGAA
CATGTGTTCCACGTTTGCTGTCATTTGTGCCATGCCCCACAAGTTCAATC
TTCTCGATCGACTGCTGGTCATGAGGAATGCTCATCCTACAGATGGTTCT
TGGAAAATGACCTGATGGCTTTTCTCACTTCTTCGTTCAATTTTTTGGAG
TGTTTAGGATCCTCCCATGAATAATGGCACCCGTATTTCCGAGTTGATTT
TCGAAATCGTGATGTGGGAAGGCGGAATGGGCGGAGGTAGCTATGTTTTG
CATGCCTCAGTTGTTGATGGTTGTTGGATTGTTGATCTCACGTCCTCCAG
AGAACAGAGCTGTGTTTCTATCATGGTGATTTCTGATGGCTTAACTGAGA
CATTCTAGTTCACTGGCCTTTTGGTATCAGAAGGCGTTTTTTTTGTTTAC
AAGGCCTTCCCGAAAATCCCTTGAAGGAAGTCGAAATAATGCGTCCTCCT
GTCACGACTTTTGAAATTCAGTCATTAATATGTATGCAAAATTCAAGGCA
ACCGAACTCATTAAATGGCAAAACTTGTCAGGGCCTTCACGAAACTTTCC
GAATACATGGGAATTAGTATAGAAATAGTGGTTTGGTCGTGAGGTTTGGA
TGACGGCGAGTTATGTTTTCGGGAATCAAGTCATGATGACCATGTATTCG
TTTCCGTGTTATCGTTGAGCCAGGTTTTGAGTTTCGTTCGTCAATTTCCA
GAAAATAAATGGAACGTAATGATAAGACCCTGACAAATGTTACTGGACAA
TCTTTGAAGATTTTCTCCGAGGAACAAGATGTCGTGTACGTTGCATTTAT
GACGGACTGTGGCGTATCTCTAATAATGTAAGGTGACTTCTTTGTGAGAC
ACGACGTCGTTTTTGTTGCTGTTTTATTTATGGTGCCTTATTTTGTTTTG
TGTGTCAAAATTATCCTCAGGGTTTGCGCGCGATTAGTAGCCCAGCACTC
GTCGGTACTAGCTATCAATCAGGCCCTTCCTTCTCGTCGTGTATCTCGTG
AGAACGAAATGTATAGTTGTTCGAGTAGGTTGACACTGTTCACTGCGATA
TAAGAATTTTTGCTATCATCTTATTTAGAGCAACTTGTATTAGAACATTA
GAACATCATGTAGTCCCTTCCCCCCCCCCCCCCCCTACCGCCTCTCTAGG
CGGTCTCTCCGGGACTGCCCCCTACTGTGCCCACCGCGGCGCCTTCGCCG
ATGCTGTCGCCTCAAACGGTTGCTCCCGCTTCGGAGTCTCAAGTCGCGGT
CGGTGCAGCTGTTGACGCCGTTGCGGTGGCGTCTGCGGCGTCTCTCGACA
ACAACGGATCTGTCGTGAAGCCTTCTCCTGCCGAGGTAACTTCCTGAGGC
ACCGGTTATCTGCTTTTTTTTCTTTTCTTTTACGAACGCGTAAGCTCACC
CGTTCACCCGTTCATAGCTGGGGTTGGCAAAAGAGAAGTTCGGACAGCAG
GCATAAAAAAAAGGGTGTACACGCAAAGAACATTTTTCATGTGAGGTGGA
CTTTTTATTTTATAACCAGAATGCTATGTTCTGTCCTAGTACGCAGTATT
ATGGGGTATTGTGCATGAATTTACACCTTTTTCTGTCCAAGTTGTACTGT
CATGTTGTCATGTATATTTTTTCCTCCTTCTTGTTCATGATGTGTGCTAT
CATGTCTTTCTTACAACCCGCAAAATATCAATACCATATTCTCTGATACC
CGTTGTCAGCCTACCTAAGTCTTTTCTACCCATCCACCCACTCCGTTTTC
CTCTCGGACCTATCGCCACTTTTCCCTCGCCAGGACCAGGTTGGTGCTAT
CCCGCCCTCCACCGTCCCCCCGGCATCGGCTCTCCCGCAGCCGGCTGCCG
CCGCCCCGACCCCTATCCCGGTGGCAGCCTCCGCCCCCGCCCCCGCCCGT
ATGGGCCCCATTGCCCCTATGACTTACGCGTCTCTCGCGAAGTCCTGGGC
TTCCCAGGCCGCCGTTGGCGGGGAAGCCGCGGCGCCGTCCCTCGGCGTCG
CCGGCGGGGCTCCGGCGTCTTCGGCCGGTGCTGCCGCCGCAGCCGGTGCC
GGCGGAGTAGCTGGGGGGGGTGGTGGGGGCGTGAGTGGGAACGGTGCGCC
CCCCGCTGCCGCTGCCGCTGGGGTTAGCAATGGGAGTTGGGGGATGCCCG
ATGCTGTTGGGGGGTCCGGAGGTGGTGGTGGTCTAGGATCGGGAGTTGGG
GACTCGGTTATGTCGGTGTCGCTCGGGCAGCAGGCT
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Coding sequence (CDS) from alignment at H-paniculata_contig7736:131..5616-

>mRNA_H-paniculata_contig7736.15758.1 ID=mRNA_H-paniculata_contig7736.15758.1|Name=mRNA_H-paniculata_contig7736.15758.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2358bp|location=Sequence derived from alignment at H-paniculata_contig7736:131..5616- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGTATTACGGAGAGGTTCTTTCGAAGAAGCCCGTGGAGCTGCACCGTTT
CTACAAAGATGAAAGTACTTTTTGCCACGCCTCCGGCACCAAAGAAGAGC
AGTATTACGGAGAGGTTCTTTCGAAGAAGCCCGTGGAGCTGCACCGTTTC
TACAAAGATGAAAGTACTTTTTGCCACGCCTCCGGCACCAAAGAAGAGGA
ACCTGTTTCTGGTCTAGCTGATATCAAGGCAAAGATCGAACACCTTGGTC
TTGGAGGCGCCACTGTGGACCTCGGCTGCGGATCCGTCGATGCGCAGCCG
TCCGAGGGAGGAACCTGTTTCTGGTCTAGCTGATATCAAGGCAAAGATCG
AACACCTTGGTCTTGGAGGCGCCACTGTGGACCTCGGCTGCGGATCCGTC
GATGCGCAGCCGTCCGAGGGAGATGGCGTGCTTCTGATGGTGACCGGATC
TATCACCATCACCGACAGTGATCCTCGTCAGTTCGTGCAGACTTTTTTCC
TGGCAAGACAACACCAGGATAACGACAGACACAACTACTTCGTGCGCAAT
GACATCTTTCGCTTCCTTGACGTCTTGCCCGAGGTTGTTCAGATGGCGTG
CTTCTGATGGTGACCGGATCTATCACCATCACCGACAGTGATCCTCGTCA
GTTCGTGCAGACTTTTTTCCTGGCAAGACAACACCAGGATAACGACAGAC
ACAACTACTTCGTGCGCAATGACATCTTTCGCTTCCTTGACGTCTTGCCC
GAGGTTGTTCAGGGTGCCTTGAGAGCTCGCGAGGGCGATGAAGACGAAGG
TGTTCCTCGCTCTGCTCCAGCAGCTAGTAACTCTAGTGTAGCTGAGGAAG
AGCCTGTGACCGAAGGTGAAAGTATGCAACAGCAGTCGAACCAAGAAACG
GTCCCTGTGGCGGCCCCTCAGGGTGCCTTGAGAGCTCGCGAGGGCGATGA
AGACGAAGGTGTTCCTCGCTCTGCTCCAGCAGCTAGTAACTCTAGTGTAG
CTGAGGAAGAGCCTGTGACCGAAGGTGAAAGTATGCAACAGCAGTCGAAC
CAAGAAACGGTCCCTGTGGCGGCCCCTCAGGCGGTCTCTCCGGGACTGCC
CCCTACTGTGCCCACCGCGGCGCCTTCGCCGATGCTGTCGCCTCAAACGG
TTGCTCCCGCTTCGGAGTCTCAAGTCGCGGTCGGTGCAGCTGTTGACGCC
GTTGCGGTGGCGTCTGCGGCGTCTCTCGACAACAACGGATCTGTCGTGAA
GCCTTCTCCTGCCGAGGCGGTCTCTCCGGGACTGCCCCCTACTGTGCCCA
CCGCGGCGCCTTCGCCGATGCTGTCGCCTCAAACGGTTGCTCCCGCTTCG
GAGTCTCAAGTCGCGGTCGGTGCAGCTGTTGACGCCGTTGCGGTGGCGTC
TGCGGCGTCTCTCGACAACAACGGATCTGTCGTGAAGCCTTCTCCTGCCG
AGGACCAGGTTGGTGCTATCCCGCCCTCCACCGTCCCCCCGGCATCGGCT
CTCCCGCAGCCGGCTGCCGCCGCCCCGACCCCTATCCCGGTGGCAGCCTC
CGCCCCCGCCCCCGCCCGTATGGGCCCCATTGCCCCTATGACTTACGCGT
CTCTCGCGAAGTCCTGGGCTTCCCAGGCCGCCGTTGGCGGGGAAGCCGCG
GCGCCGTCCCTCGGCGTCGCCGGCGGGGCTCCGGCGTCTTCGGCCGGTGC
TGCCGCCGCAGCCGGTGCCGGCGGAGTAGCTGGGGGGGGTGGTGGGGGCG
TGAGTGGGAACGGTGCGCCCCCCGCTGCCGCTGCCGCTGGGGTTAGCAAT
GGGAGTTGGGGGATGCCCGATGCTGTTGGGGGGTCCGGAGGTGGTGGTGG
TCTAGGATCGGGAGTTGGGGACTCGGTTATGTCGGTGTCGCTCGGGCAGC
AGGCTGACCAGGTTGGTGCTATCCCGCCCTCCACCGTCCCCCCGGCATCG
GCTCTCCCGCAGCCGGCTGCCGCCGCCCCGACCCCTATCCCGGTGGCAGC
CTCCGCCCCCGCCCCCGCCCGTATGGGCCCCATTGCCCCTATGACTTACG
CGTCTCTCGCGAAGTCCTGGGCTTCCCAGGCCGCCGTTGGCGGGGAAGCC
GCGGCGCCGTCCCTCGGCGTCGCCGGCGGGGCTCCGGCGTCTTCGGCCGG
TGCTGCCGCCGCAGCCGGTGCCGGCGGAGTAGCTGGGGGGGGTGGTGGGG
GCGTGAGTGGGAACGGTGCGCCCCCCGCTGCCGCTGCCGCTGGGGTTAGC
AATGGGAGTTGGGGGATGCCCGATGCTGTTGGGGGGTCCGGAGGTGGTGG
TGGTCTAGGATCGGGAGTTGGGGACTCGGTTATGTCGGTGTCGCTCGGGC
AGCAGGCT
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