mRNA_H-paniculata_contig773.15755.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig773.15755.1
Unique NamemRNA_H-paniculata_contig773.15755.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig773.15755.1 vs. uniprot
Match: D7FN87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN87_ECTSI)

HSP 1 Score: 285 bits (729), Expect = 8.960e-87
Identity = 164/282 (58.16%), Postives = 192/282 (68.09%), Query Frame = 1 
Query:  538 AGTPVSPTQVGEFVRGALQYGDSVALAVG--------MSTPPDNDNTSSDPVSSPEYSLVHSVTQAAQAAEEEWAFSHREAKALG----GSARR---VTIIPVTPWGNFTPALNALLSFAARDGAELVLFQSLETAVSKDAVLEMETLMGPKYLVVGGALTGHAFQEGETVQLTGVTTPWNTLALWDVPKLSKLGFIGVAEGLVNGVAAGVEEVSVIATLQALLGPENCKARLVRLPQVKWQAEWEDEGRRRWHESKMASKVDRAEAQMRALGITRGLVEHV 1338
            A  PV   +V EF+  AL Y DS+A+AVG                             L+ S+T AA+ AE E A   R  +++G    G  R    V +  VTPWG FTPALNALL FA+RDGAELV+FQSLET V KDAV  ME  MGP  LVVG ALTGHAF+ GETV+LTGVTTPWNTLALWDV KL+KLGF+GVAEGL+ GV AGVEEV+ IA LQ LLG E+ +A+LVRLPQV+W   WEDEGRRRWHESKM+SK +RA+ QM ALGI +G VEH+
Sbjct:   52 ADRPVDLVKVREFLNTALLYADSIAIAVGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLQSITLAAREAERE-APPDRAVESVGEGGGGEGRAAGVVNVFEVTPWGKFTPALNALLGFASRDGAELVMFQSLETTVGKDAVSGMEAYMGPADLVVGAALTGHAFRGGETVELTGVTTPWNTLALWDVAKLAKLGFLGVAEGLLPGVPAGVEEVTAIAALQVLLGAEHARAKLVRLPQVRWHTAWEDEGRRRWHESKMSSKRERADKQMSALGIKKGTVEHL 332
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BLAST of mRNA_H-paniculata_contig773.15755.1 vs. uniprot
Match: A0A6H5J5G9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5G9_9PHAE)

HSP 1 Score: 229 bits (585), Expect = 1.070e-65
Identity = 136/230 (59.13%), Postives = 161/230 (70.00%), Query Frame = 1 
Query:  550 VSPTQVGEFVRGALQYGDSVALAVGMSTPPDNDNTSSDPVSSPEYS---LVHSVTQAAQAAEEEWAFSHREAKALG-------GSARRVTIIPVTPWGNFTPALNALLSFAARDGAELVLFQSLETAVSKDAVLEMETLMGPKYLVVGGALTGHAFQEGETVQLTGVTTPWNTLALWDVPKLSKLGFIGVAEGLVNGVAAGVEEVSVIATLQALLGPENCKARLVRLPQV 1209
            V   +V EF+  AL Y DS+A+AVG   PP  D   +        S   L+ S+T AA+ AE + A   R  +++G       G+A  V +  VTPWG FTPALNALL FA+RDGA+LV+FQSLET V KDAV  ME  MGP  LVVG ALTGHAFQ GETV+LTGVTTPWNTLALWDV KL+KLGF+GVAEGL+ GV AGVEEV+ IA LQALLG E+ +A+LVRLPQ 
Sbjct:   51 VDLVKVREFLDTALLYADSIAIAVGT-PPPSADQHGTXXXXXXXDSTPPLLQSITLAAREAERK-APPDRGVESVGEEGGGERGAAGVVNVFEVTPWGKFTPALNALLGFASRDGADLVMFQSLETTVGKDAVSGMEAHMGPADLVVGAALTGHAFQGGETVELTGVTTPWNTLALWDVAKLAKLGFLGVAEGLLPGVPAGVEEVTAIAALQALLGAEHARAKLVRLPQA 278
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BLAST of mRNA_H-paniculata_contig773.15755.1 vs. uniprot
Match: A0A835Z311_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z311_9STRA)

HSP 1 Score: 203 bits (516), Expect = 5.610e-56
Identity = 126/275 (45.82%), Postives = 158/275 (57.45%), Query Frame = 1 
Query:  547 PVSPTQVGEFVRGALQYGDSVALAVGMSTPPDNDNTSSDPVSSPEYSLVHSVTQAAQAAEEEWAFSHREAKALGGSARRVTIIPVTPWGNFTPALNALLSFAARDGAELVLFQSLETAVSKDAVLEMETLMGPKY-LVVGGALTGHAFQEGETVQLTGVTTPWNTLALWDVPKLSKLGFIGVAEGLVNGVAAGVEEVSVIATLQALL----------GPENCKARLVRLPQVKWQAEWEDEGRRRWHESKMASKVDRAEAQMRALGITRGLVEHV 1338
            P+    V  F  GAL Y D+V +AVG +                + + + S+ Q AQAAE+          A   +   V ++ VTPWG FTPALNALL  AA  GA L+LFQSLETA +   V  +E  + P   LVVG AL GH F  GE  ++TG TTPWNTLALW VP+L++LGF+ V++G V GVAAGVEEV+ I+ LQ L               C+A+L+ L    W+AEWED+ RR WH SKMASK  RA AQM AL    G V H+
Sbjct:   25 PIDLRAVSAFFTGALAYADTVMIAVGTT----------------DSATLASIQQTAQAAEQ----------AASRAPGTVLVLQVTPWGQFTPALNALLCAAASAGAPLILFQSLETAATPALVSALEAELDPAQDLVVGAALPGHDFSPGEH-EITGTTTPWNTLALWSVPQLARLGFLTVSDGAVAGVAAGVEEVAAISLLQQLRHSGGSGGGGSATRECRAKLLCLEGATWEAEWEDDARRSWHASKMASKRQRAAAQMAALCARPGRVLHI 272
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BLAST of mRNA_H-paniculata_contig773.15755.1 vs. uniprot
Match: A0A7S2V0C8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0C8_9STRA)

HSP 1 Score: 195 bits (495), Expect = 2.640e-54
Identity = 100/192 (52.08%), Postives = 134/192 (69.79%), Query Frame = 1 
Query:  766 GGSARRVTIIPVTPWGNFTPALNALLSFAARDGAELVLFQSLETAVSKDAVLEMETLMGPKYLVVGGALTGHAFQEGETVQLTGVTTPWNTLALWDVPKLSKLGFIGVAEGLVNGVAAGVEEVSVIATLQALLGPENCKARLVRLPQVKWQAEW-EDEGRRRWHESKMASKVDRAEAQMRALGITRGLVEHV 1338
            G   R+V  +PV PWG FTPALNALL+ A+ +G  L+ +QSLE AV ++   E++  M P  ++VG AL GH F  GE+V+  G T PWNTLALWD  +LS  GFI ++EGL+ GV+AGVEE + +  LQ L  PE   A+LVRL Q++W   W EDEGR++WHE+KMASK  R+ +Q++ALGI   +V+HV
Sbjct:   15 GAEERKVVALPVAPWGCFTPALNALLAHASSEGFGLISYQSLEMAVCREDYEELKAQMEPGDVLVGAALPGHIFSPGESVEAGGRTCPWNTLALWDTARLSLTGFIPLSEGLLPGVSAGVEEATALTLLQHLK-PETSGAKLVRLSQIEWNTNWGEDEGRKQWHEAKMASKASRSSSQLQALGIPPAMVKHV 205
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BLAST of mRNA_H-paniculata_contig773.15755.1 vs. uniprot
Match: A0A7R9YER5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YER5_9STRA)

HSP 1 Score: 167 bits (422), Expect = 1.270e-42
Identity = 94/213 (44.13%), Postives = 135/213 (63.38%), Query Frame = 1 
Query:  742 SHREAKALGGSARRVTIIPVTPWGNFTPALNALLSFAARDGAELVLFQSLETAVSKD---AVLEMETLMGPKYLVVGGALTGHAFQEGETVQLTGVTTPWNTLALWDVPKLSKLGFIGVAEGLVNGV--------AAGVEEVSVIATLQALLGPENCKARLVRLPQVKWQAEWEDEGRRRWHESKMASKVDRAEAQMRALGITRGLVEHVAVS 1347
            + +E  A  GS   + ++PV PWG F PAL+ALL +AA +G E++LFQS+E   S +   A+++   L G   LVVG A+ GH F+ G  V LTG TTPWNTLALW+  +L+K GF+GVAEG V  V        A GVEEV+ I+  Q+L      +A+L+++P + W+ +++D  RR WHE KM SK+ RA+AQ+  L +    VEH+ ++
Sbjct:  115 AEKEKVATAGS--EIAVLPVQPWGQFVPALHALLGYAATEGYEMILFQSVEIETSPETLRALVDHLDLDGGD-LVVGVAIQGHEFKPGTNV-LTGRTTPWNTLALWNTQELAKTGFLGVAEGWVRTVGDEGETVIAGGVEEVTAISAAQSLSPSRRARAKLLKVPGITWETQFKDAERRAWHERKMRSKLSRAQAQLSVLKLPTAYVEHIDLT 323
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BLAST of mRNA_H-paniculata_contig773.15755.1 vs. uniprot
Match: A0A507BTI1_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507BTI1_9FUNG)

HSP 1 Score: 158 bits (400), Expect = 2.150e-40
Identity = 88/195 (45.13%), Postives = 124/195 (63.59%), Query Frame = 1 
Query:  769 GSARRVTIIPVTPWGNFTPALNALLSFAARDGAELVLFQSLETAVSKDAVLEMETLMGPKYLVVGGALTGHAFQEGETVQLTGVTTPWNTLALWDVPKLSKLGFIGVAEGLVNGVAAGVEEVSVIATLQALLGPENCKARLVRLPQVK----WQAEWEDEGRRRWHESKMASKVDRAEAQMRALGIT-RGLVEHV 1338
            G+   ++++PV+ WGNF PALNALL FAA    + +L+QS+E   +++ V  + + +    LVVG     H FQ   +  L GVT PWNTLA+W V KL+  GF+ VAEG  + VA GVEEVSVIA LQ +L P++ KA+L+R+ Q      W  +W D GR+ WH  KMASK+ R  A ++ L +T  G+V+H+
Sbjct:   60 GAVSHISLVPVSDWGNFIPALNALLLFAAAKNFDCILYQSVEAVATREIVDVLISHLSEDTLVVGKCFKDHRFQP-PSQPLDGVTAPWNTLAIWSVKKLALTGFLLVAEGF-HDVAGGVEEVSVIALLQTIL-PDSSKAKLIRMKQDAIGDGWITDWTDAGRKEWHTQKMASKLSRPAAHLKLLHLTGHGIVDHI 251
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BLAST of mRNA_H-paniculata_contig773.15755.1 vs. uniprot
Match: A0A8K1C575_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C575_PYTOL)

HSP 1 Score: 158 bits (399), Expect = 9.170e-40
Identity = 108/271 (39.85%), Postives = 159/271 (58.67%), Query Frame = 1 
Query:  562 QVGEFVRGALQYGDSVALAVGMSTPPDNDNTSSDPVSSPEYSL-VHSVTQAAQAAEEEWAFSHREAKAL---GGSARRVTIIPVTPWGNFTPALNALLSFAAR--DGAELVLFQSLETAVSKDAV--LEMETLMGPKYLVVGGALTGHAFQ--EGETVQLTGVTTPWNTLALWDVPKLSKLGFIGVAEGL-VNGVAAGVEEVSVIATLQALLGPENCKARLVRLPQVKWQAE-WEDEGRRRWHESKMASKVDRAEAQMRALGITRGLVEHV 1338
            Q   F R A  YGD+V LA+G+ +P  + +          +++ VH+  Q  Q        +H     L    GSA  V ++P+T WG+F PALNA+++  A      + +LFQSLE  V    V  L  +  +G   LVVG AL GH++Q  + + + LTG+TTPWNTLA+WD+  L+K+GF  V EGL ++G AAGVEEVS IA  Q+L  P+  +A+++++P ++WQ + ++D  R+RW E KM SK++R   QM  L I  G V H+
Sbjct:   44 QADGFCRRAATYGDAVVLAIGLPSPLQDADV---------FTMSVHAFVQRLQ--------THLNNNPLITRSGSACPVVLVPMTYWGSFVPALNAIIATTATRYPDVDQLLFQSLEIVVDAAGVDHLRAKFQVGSD-LVVGAALPGHSYQPNKSQPLPLTGLTTPWNTLAVWDLTLLAKVGFPLVGEGLRIDGNAAGVEEVSTIALYQSLY-PDQTRAKVIQVPGLEWQVDSFDDPERQRWQERKMQSKLERPAKQMEYLSIPTGQVYHL 295
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BLAST of mRNA_H-paniculata_contig773.15755.1 vs. uniprot
Match: A0A1Z5K272_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K272_FISSO)

HSP 1 Score: 151 bits (381), Expect = 2.240e-37
Identity = 89/192 (46.35%), Postives = 119/192 (61.98%), Query Frame = 1 
Query:  781 RVTIIPVTPWGNFTPALNALLSFAA-RDGAELVLFQSLETAVSKDAVLEMETLMGPKYLVVGGALTGHAFQEGETVQLTGVTTPWNTLALWDVPKLSKLGFIGVAEGLVNG----VAAGVEEVSVIATLQALLGPENCKARLVRLPQVKWQAE-WEDEGRRRWHESKMASKVDRAEAQMRALGITRGLVEHV 1338
            R+ ++PVTPWG F  ALNAL+ +A  R  A+ +LF S ET V +D + E+   + P  LVVG  L GH  +      L+G T+PWNTLA+WD+ KLS  GF  V++GL+       + GVEEV  IA LQ LLG EN KA+LV L  V WQ + ++D  RR+W E KM SK  RA+ Q+  +G+  G V H+
Sbjct:   97 RIHVLPVTPWGEFVSALNALVIYARKRLQADRILFLSAETVVDRDGIQELLAHLTPDTLVVGARLPGHVVRGECVTLLSGTTSPWNTLAVWDLHKLSLTGFQLVSDGLLTDDKEEPSFGVEEVVAIALLQKLLGTENAKAKLVTLKHVDWQVDSFDDPERRKWQEEKMKSKEIRAQRQLDLIGLA-GKVHHL 287
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BLAST of mRNA_H-paniculata_contig773.15755.1 vs. uniprot
Match: F4NXG8_BATDJ (Uncharacterized protein n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=F4NXG8_BATDJ)

HSP 1 Score: 149 bits (377), Expect = 2.970e-37
Identity = 82/166 (49.40%), Postives = 105/166 (63.25%), Query Frame = 1 
Query:  778 RRVTIIPVTPWGNFTPALNALLSFAARDGAELVLFQSLETAVSKDAVLEMETLMGPKYLVVGGALTGHAFQEGETVQLTGVTTPWNTLALWDVPKLSKLGFIGVAEGLVNGVAAGVEEVSVIATLQALLGPENCKARLVRL---PQVKWQAEWEDEGRRRWHESKM 1266
            +RV ++PV  WG F PALNALL  A   G + +L+QS+E  VS + +  M +      LVVG AL+GHAF  G+  +L GVTTPWNTLALW V KL  LGF+ VAEG    V  GVEEVS IA  Q L+ P + KA L+R+   P   W  +W D+GR+ WH+ K+
Sbjct:   76 KRVVLVPVVKWGRFIPALNALLLEAVNGGFKYILYQSVEAVVSANEIHTMISWFDQDTLVVGKALSGHAFTVGKQ-RLNGVTTPWNTLALWAVSKLKCLGFLMVAEGS-EDVQGGVEEVSAIAVFQKLVSPNHAKAILLRMSEDPSQDWDTQWTDQGRQAWHDKKL 239
[Close]
BLAST of mRNA_H-paniculata_contig773.15755.1 vs. uniprot
Match: A0A2R5GIM4_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIM4_9STRA)

HSP 1 Score: 154 bits (388), Expect = 4.380e-37
Identity = 110/269 (40.89%), Postives = 151/269 (56.13%), Query Frame = 1 
Query:  565 VGEFVRGALQYGDSVALAVGMSTPPDNDNTSSDPVSSPEYSLVHSVTQAAQAAEEEWAFSHREAKALGGSARRVTIIPVTPWGNFTPALNALLSFAARDGAELVLFQSLETAVSKDAV--LEMETLMGPKYLVVGGALTG-HAFQEGETVQLTGVTTPWNTLALWDVPKLSKLGFIGVAEGLVN-GVAAGVEEVSVIATLQALLGPENCKARLVR----LPQVKWQAEWE-DEGRRRWHESKMASKVDRAEAQMRALGITRGLVEHVAV 1344
            +G F+R AL   D+V +AVG S P   D              + ++  AAQ +          A+      ++V ++PV+PWG F PALNAL SFAA  G + + FQSLE  V  D +  L  +  +G   LV G A    H F  G  V L G T+PWNTLA+W V KL+  GF  VAEGL + G++AGVEEVS I+ LQ ++ P   KA+L+     L    W+ +++ DE RR WH  KM SK+DR  AQ+ ALGI  G+V+H+++
Sbjct:  170 LGGFLRCALAIADTVVIAVGAS-PGTVDK-------------IRALVNAAQTS----------ARQQHQGGKQVHVLPVSPWGKFVPALNALTSFAANHGFKYICFQSLEVDVPPDVIRALVAQLQLGDT-LVAGAAFPNDHLFSSGWHV-LNGRTSPWNTLAVWAVGKLALTGFSLVAEGLPHEGISAGVEEVSTISILQRIM-PRQAKAKLLLHRALLRADTWRTDFQGDEARRDWHRKKMQSKIDRPAAQLDALGIDPGIVQHISL 411
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig773.15755.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN87_ECTSI8.960e-8758.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J5G9_9PHAE1.070e-6559.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z311_9STRA5.610e-5645.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V0C8_9STRA2.640e-5452.08Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9YER5_9STRA1.270e-4244.13Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A507BTI1_9FUNG2.150e-4045.13Uncharacterized protein n=1 Tax=Synchytrium microb... [more]
A0A8K1C575_PYTOL9.170e-4039.85Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1Z5K272_FISSO2.240e-3746.35Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
F4NXG8_BATDJ2.970e-3749.40Uncharacterized protein n=2 Tax=Batrachochytrium d... [more]
A0A2R5GIM4_9STRA4.380e-3740.89Uncharacterized protein n=1 Tax=Hondaea fermentalg... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig773contigH-paniculata_contig773:15530..20298 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score292.0
Seed ortholog evalue3.7e-76
Seed eggNOG ortholog2880.D7FN87
Hectar predicted targeting categoryother localisation
EggNOG OGs28KV4@1,2QTBH@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-15_003370.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size2120
Cds size1032
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930960.0004823-UTR-H-paniculata_contig773:15529..158501622930960.0004823-UTR-H-paniculata_contig773:15529..15850Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig773 15530..15850 +
1691481528.358889-UTR-H-paniculata_contig773:15529..158501691481528.358889-UTR-H-paniculata_contig773:15529..15850Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig773 15530..15850 +
1622930960.10253-UTR-H-paniculata_contig773:19531..202981622930960.10253-UTR-H-paniculata_contig773:19531..20298Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig773 19532..20298 +
1691481528.416291-UTR-H-paniculata_contig773:19531..202981691481528.416291-UTR-H-paniculata_contig773:19531..20298Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig773 19532..20298 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930960.0134866-CDS-H-paniculata_contig773:15850..162751622930960.0134866-CDS-H-paniculata_contig773:15850..16275Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig773 15851..16275 +
1691481528.3690746-CDS-H-paniculata_contig773:15850..162751691481528.3690746-CDS-H-paniculata_contig773:15850..16275Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig773 15851..16275 +
1622930960.0280135-CDS-H-paniculata_contig773:16374..165131622930960.0280135-CDS-H-paniculata_contig773:16374..16513Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig773 16375..16513 +
1691481528.376909-CDS-H-paniculata_contig773:16374..165131691481528.376909-CDS-H-paniculata_contig773:16374..16513Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig773 16375..16513 +
1622930960.047226-CDS-H-paniculata_contig773:16750..169411622930960.047226-CDS-H-paniculata_contig773:16750..16941Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig773 16751..16941 +
1691481528.3883805-CDS-H-paniculata_contig773:16750..169411691481528.3883805-CDS-H-paniculata_contig773:16750..16941Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig773 16751..16941 +
1622930960.0658848-CDS-H-paniculata_contig773:17457..175871622930960.0658848-CDS-H-paniculata_contig773:17457..17587Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig773 17458..17587 +
1691481528.398944-CDS-H-paniculata_contig773:17457..175871691481528.398944-CDS-H-paniculata_contig773:17457..17587Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig773 17458..17587 +
1622930960.0817862-CDS-H-paniculata_contig773:19384..195311622930960.0817862-CDS-H-paniculata_contig773:19384..19531Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig773 19385..19531 +
1691481528.4085755-CDS-H-paniculata_contig773:19384..195311691481528.4085755-CDS-H-paniculata_contig773:19384..19531Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig773 19385..19531 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig773.15755.1prot_H-paniculata_contig773.15755.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig773 15851..19531 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig773.15755.1

>prot_H-paniculata_contig773.15755.1 ID=prot_H-paniculata_contig773.15755.1|Name=mRNA_H-paniculata_contig773.15755.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=344bp
MQASACRTGWETRLCGTDDDNSSILPTFVYVLTRLDFIVQVCCIVSISHC
YIEHYTLTITVIIPHYRTVDCCAGTPVSPTQVGEFVRGALQYGDSVALAV
GMSTPPDNDNTSSDPVSSPEYSLVHSVTQAAQAAEEEWAFSHREAKALGG
SARRVTIIPVTPWGNFTPALNALLSFAARDGAELVLFQSLETAVSKDAVL
EMETLMGPKYLVVGGALTGHAFQEGETVQLTGVTTPWNTLALWDVPKLSK
LGFIGVAEGLVNGVAAGVEEVSVIATLQALLGPENCKARLVRLPQVKWQA
EWEDEGRRRWHESKMASKVDRAEAQMRALGITRGLVEHVAVSR*
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mRNA from alignment at H-paniculata_contig773:15530..20298+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig773.15755.1 ID=mRNA_H-paniculata_contig773.15755.1|Name=mRNA_H-paniculata_contig773.15755.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4769bp|location=Sequence derived from alignment at H-paniculata_contig773:15530..20298+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCTGTATCGTGGACTAATTAACTAACCCGTCTAGTTCTCTAAAACGGAAC
CGACAACAATCGACTAAGCCGATTAAATCCCGAAACTGCCCACGATTAAG
TAAACGACTAAGTAAACGACTAAGTGAACGACTCGACTAGAACCAGTATG
AGTCCTCGTCGTTGGACGTGTGCAACTTCTGCCTCTGAGCGTGGGTCTCA
GCTACTCGACTAAACTGTTACATGTTAACAGAATATTGATTCAACATGTT
TTCGTAGCCTACATTTTACAGACTCCCCAGTCAACGTTGTATCGCACCCT
TCCATTTTCCACAGTCCACCTATGCAAGCGAGTGCGTGCAGGACGGGTTG
GGAAACTCGACTTTGTGGTACAGATGATGACAATTCCTCCATCCTACCCA
CATTCGTTTATGTATTGACTCGACTCGATTTCATCGTACAGGTGTGTTGT
ATTGTTTCAATCTCACACTGCTACATTGAACACTATACTCTTACTATTAC
TGTTATTATTCCACACTATCGCACTGTTGACTGTTGCGCTGGTACACCCG
TTTCACCAACACAGGTTGGTGAGTTCGTGCGGGGTGCCCTGCAATACGGC
GACTCTGTCGCGTTGGCCGTGGGCATGTCGACACCACCAGACAACGACAA
CACTAGTAGCGATCCTGTCAGTAGTCCAGAGTACTCCCTTGTGCACTCCG
TAACCCAGGCTGCTCAAGCGGCCGAAGAAGAATGGGCCTTTTCGCAGTCA
GAATGCGGCTATCCAAATGGAGACACCACCGCCAACAAGACTCATGGAGA
CATCGAGATTGAGGAAGGAGGGGGACGGACGAGCGGACCTTCTAGTCGTG
AAGCTAAGGCGTTGGGTGGAAGTGCCCGAAGGGTCACGATTATACCCGTG
ACCCCTTGGGGTAATTTCACGCCTGCGCTGAACGCCCTGCTATCCTTTGC
GGCCCGTGATGGGGCCGAGCTAGTCTTGTTTCAGGTGAAAATTGCCCGTT
CCTTTATGTACAATTTGTTTGGGTGTACGTAGTGCGTGCGTACGTGCGTC
GCTGTGATCTGCGGTGTCGATGCAGTTCGATTACACTGGTATTAAGTGCT
CATGACAACCTGATCAACCCGTTGTTGTCCATCAAATCAATAGCAAAATG
TCATTCCCTCATACCCTCCTGCACCCACTCCCGCCGCCTGTACCACTCGC
ACGAACGCGCTCCCACCTCAGTCGTTGGAGACTGCCGTTTCAAAGGATGC
CGTCCTGGAAATGGAAACTCTCATGGGGCCAAAATATCTTGTGGTCGGGG
GTGCCCTGACCGGACATGCCTTCCAAGAGGGTGAAACCGTACAGCTGACG
GGAGTGACCACGCCTTGGAATACTTTGGCTTTGTGGGATGTACCTAAACT
GTCGAAGCTAGGGTGAGAATTTCCGTTTTCCTTCAAGTTGCCATTTTGTT
GCCTCTGGGGTTACTGTGCTACAGCCCTCGCGCAACAGGTTATTACCGCC
ATGCTCCAAAGTCCTTCGTTGGTACTTCGGAGCTATGTGTCGTGCTACCG
TGCGCGACAACTCCGGTATGCGAGATTAACACACATTTCACTGGGACTGA
CAATATTTGTAGCGGGAACTACATGGCTGTCGTCACGACCTGACCTCTTA
CCCCACATGCGTTGCTCGTCGACTCGTCGCCCTCGCGGTGTTGATGACTG
AGTAATGTACATGCCACAGACGTAACAATAGTTTCCACAGAACTCGCCAT
CCAATCTATTCATACCGACTTAACGCAGTTGTTTTGGGTGAAGGCTATCA
GGCACGGGTGAAAACAGATACGGCTATGTTCAGCCAAAGGCATTGTTTTA
TAGTTCACGCGCGATTAAAGCTCAAATCCTCATCGCCGTTGCCGCGCTGT
GACTCTTGACTTTGGGGTTATTGTGCAGGTTTATAGGGGTCGCGGAGGGA
TTAGTTAATGGCGTAGCTGCAGGAGTAGAGGAGGTATCAGTCATCGCTAC
GTTGCAGGCATTGCTTGGGCCCGAGAATTGCAAGGCCAGGCTGGTCCGAC
TGCCTCAGGTGAGATAAAATGTCACGAATCTCAACCGCCGCTCCCTTCTC
TTGCTCAGTTTTATGTTCAAGCTTAGTTTGTGAGGCGCTGTTGCTGTGGA
TAGTGCAGAAGGATCTCGTGAAAACTCCAGGTATGATGATACAGTACGGC
ATGGTTTCTTCGTTATTTTGTCCGAGATGTACGTGCGCTCCCGCTGTTTT
GTTTGCATGTTTGGCCTCAAATCTGTCTTGAAATGATTTTGGCTATCTAT
TCTGTTACTTGTCGTCCATCCGAGTGGACCCTCCTCTTCCCTCATGAAAT
CCGTACTCGGGTTGAACACTTCCGGAAGAAGCGAAGGGAATGCTATTTTT
TTAATGGTTGAAGCACCTGCGTTGTAATCAGTAGAAATTGAAAAAAATCC
CCCCATTAAAGAAGGCCTTCGGATGGTATGAGGTAAGGGGACACAATAAT
TTGTCGTTACCCGTAGGTACCGCTGAAAATGGCAAGCCAAGCTAAAGATC
TCTGTCGCAGTACGCAGGACCCCTCGTGTACTCCAGGCAGCAACGCACCA
GGAGAGGAGGGTAGAGTGTGTACCGCAATGTGACAGTAGCTGGCGCTTGA
TAAGGTGCGGATGTCTTGATGAGTTGAGAGATTGGACATTTGTCAACTGT
GCAGCTCTCATTTTCCATTTATATAGTGTTGATTGTCATTTTCCAACTGT
TGATGGTTGACAGGCTGGGGTGCCCTGCACCGTCAATCATATAAATAATG
GAGGAGCTTGGGCCTACTGTGAGGTGTGACTCGCTGAGCGACAAACAGCT
GTAAGAAGGCACTTTGAGAGTTTTCAGGCTGTCCTTGTGAAGGAGCCTTG
CTGCCATACAATGTGTCAGAGGCGAAATATCGGGGATACCGTTTGTTCGT
GTCATTTCCAGAGATTAGAGGGACAGAGTTGCTAGTGTGTGGGTCAATGT
TGCTCAACGCAAAAGACTAAAAAAATGCCCCGAAATTGGTGAACAACTGC
GCCACACTATAGTTTGACATATGAGCAAGACGCCCTGACCATCTAGAGTT
TTCAAGTGGGTCGATCCGAGGCCGAGGGACCTGTACAGACTATGCCGAAG
CTACCCTCTTTTTTCTACCGTTCTAGATTTTTGACAGTATTTGAGTGTGA
AACCGCCCCAAATTCTTCAGACAGACGTTATCTCAGAAGCTGGCCAACTG
CGTGCGAGGACTGTATGGTGGTCTATACTGACTGTACTGCGGCAGTGCAG
TGCTGTACAACATGATTCGAAAAGAAGACGTCATTTTTACCGCTTATTGC
GTCTTTATCCACGGCCAAGCTAGGCATATTTGGCATGCTTCTGACTGTCC
AACGCCGGGACTGCCACCTCCCCCCAATAATATCGAATTTCGCCGTTGAC
TCGCTGGATGGATCGGACGAAGTTCTGTCAACACAGGTGGATACGTCCGA
GCGTTGACGGTGCAAACAACATGTTTCCATGTACAAAATTGAGTAGTGTG
CTTCGATAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTAGAATTGGA
TATTAAAGAAGTCTGCAATACAAGTGGGAGGGGAAATATCGCCTCTTGAG
CCGGACACACTGCGCGTTGTATGTGTGTTTTATTTTATTGCCCTTAGAGT
TGGCAGCTTCCATTTTCAAGTGTTCCAAAGTGCTGCATTTTGATGCCGTT
GTCTTCCGCGAAAATCTTTCGTCGCTCCCGCATGTACCGCAAAACATTTT
CCCCATGTATTTGCTTTGGTTTTTTGTCTGCTTGCTGTCGGTTTGATCCA
ACAAGGTCAAGTGGCAGGCCGAGTGGGAGGACGAAGGCAGGCGACGATGG
CACGAATCAAAGATGGCCAGCAAAGTAGACAGGGCCGAGGCTCAGATGCG
CGCTCTTGGTATCACGAGAGGACTGGTGGAGCACGTCGCTGTCAGTCGAT
GATTGCAGTAGTGGGGCACTCAGCGGTAGTCTAAGAAGAGCCACTCTCGA
TAATTCTGAGGGTTAATTTCAATGCGTCTTGGAAACATCACTTGCGCAAT
ATTTTCCTTTAACTCTTGAAGCACGATTTGGGGATTGATCCTGTCGCCTT
TGTTCATTCTTAAGATCTTAGAAGACTATTAATATATACTTGTTCATGAT
TCGTGTGTACATGTACGACAGTTCCTGCGGTGAAGATTCGAACAGGTCGG
TCGCCCTGAAAAGGTCAATAAAGAGGTTGGAACCATCGTCTGGGAAATAA
CTCTGTTCTGTAAAAGGAAATGTAGACGTACTTCGGTATGGAAGCATCGG
ATAGAGGTTTTTGCCTTAGCATTCCGGGGGTAAAAAAAACAAGAAAAAGA
AACACCGTCTGGGAAGAATGTAATTCAAGTCTCGAAAAAATACGTTGTGG
AATATTCTTGTCTGGCACAGGGTTTGGATCTATTTAGCAGAAACCTAAGC
AATGCTTGAGGTTAGGAGCACGGTTTAGAAGTGATCGACCCTTGTAGTTC
CTTTGACATGACGTCATTCTTCAGTACAAAGGTGGCCCTGAGTCAAATAT
TTTTGCCATTACGCAGGTCTTGGTGAAAAAACCATCTATTGCGGTGATTT
TATGTTGCTCGGGTTTAGACAGGAAACGTGTGGCGCTCTTCACGTGCGAC
ACAGGCACAGGATACAGCCTTTGCGCACGCTACCAACAGCTTGTGCTGTG
GTCAGCACAAAGAAATGCA
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Coding sequence (CDS) from alignment at H-paniculata_contig773:15530..20298+

>mRNA_H-paniculata_contig773.15755.1 ID=mRNA_H-paniculata_contig773.15755.1|Name=mRNA_H-paniculata_contig773.15755.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2064bp|location=Sequence derived from alignment at H-paniculata_contig773:15530..20298+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCAAGCGAGTGCGTGCAGGACGGGTTGGGAAACTCGACTTTGTGGTAC
AGATGATGACAATTCCTCCATCCTACCCACATTCGTTTATGTATTGACTC
GACTCGATTTCATCGTACAGGTGTGTTGTATTGTTTCAATCTCACACTGC
TACATTGAACACTATACTCTTACTATTACTGTTATTATTCCACACTATCG
CACTGTTGACTGTTGCGCTGGTACACCCGTTTCACCAACACAGGTTGGTG
AGTTCGTGCGGGGTGCCCTGCAATACGGCGACTCTGTCGCGTTGGCCGTG
GGCATGTCGACACCACCAGACAACGACAACACTAGTAGCGATCCTGTCAG
TAGTCCAGAGTACTCCCTTGTGCACTCCGTAACCCAGGCTGCTCAAGCGG
CCGAAGAAGAATGGGCCTTTTCGCAATGCAAGCGAGTGCGTGCAGGACGG
GTTGGGAAACTCGACTTTGTGGTACAGATGATGACAATTCCTCCATCCTA
CCCACATTCGTTTATGTATTGACTCGACTCGATTTCATCGTACAGGTGTG
TTGTATTGTTTCAATCTCACACTGCTACATTGAACACTATACTCTTACTA
TTACTGTTATTATTCCACACTATCGCACTGTTGACTGTTGCGCTGGTACA
CCCGTTTCACCAACACAGGTTGGTGAGTTCGTGCGGGGTGCCCTGCAATA
CGGCGACTCTGTCGCGTTGGCCGTGGGCATGTCGACACCACCAGACAACG
ACAACACTAGTAGCGATCCTGTCAGTAGTCCAGAGTACTCCCTTGTGCAC
TCCGTAACCCAGGCTGCTCAAGCGGCCGAAGAAGAATGGGCCTTTTCGCA
TCGTGAAGCTAAGGCGTTGGGTGGAAGTGCCCGAAGGGTCACGATTATAC
CCGTGACCCCTTGGGGTAATTTCACGCCTGCGCTGAACGCCCTGCTATCC
TTTGCGGCCCGTGATGGGGCCGAGCTAGTCTTGTTTCAGTCGTGAAGCTA
AGGCGTTGGGTGGAAGTGCCCGAAGGGTCACGATTATACCCGTGACCCCT
TGGGGTAATTTCACGCCTGCGCTGAACGCCCTGCTATCCTTTGCGGCCCG
TGATGGGGCCGAGCTAGTCTTGTTTCAGTCGTTGGAGACTGCCGTTTCAA
AGGATGCCGTCCTGGAAATGGAAACTCTCATGGGGCCAAAATATCTTGTG
GTCGGGGGTGCCCTGACCGGACATGCCTTCCAAGAGGGTGAAACCGTACA
GCTGACGGGAGTGACCACGCCTTGGAATACTTTGGCTTTGTGGGATGTAC
CTAAACTGTCGAAGCTAGGTCGTTGGAGACTGCCGTTTCAAAGGATGCCG
TCCTGGAAATGGAAACTCTCATGGGGCCAAAATATCTTGTGGTCGGGGGT
GCCCTGACCGGACATGCCTTCCAAGAGGGTGAAACCGTACAGCTGACGGG
AGTGACCACGCCTTGGAATACTTTGGCTTTGTGGGATGTACCTAAACTGT
CGAAGCTAGGGTTTATAGGGGTCGCGGAGGGATTAGTTAATGGCGTAGCT
GCAGGAGTAGAGGAGGTATCAGTCATCGCTACGTTGCAGGCATTGCTTGG
GCCCGAGAATTGCAAGGCCAGGCTGGTCCGACTGCCTCAGGTTTATAGGG
GTCGCGGAGGGATTAGTTAATGGCGTAGCTGCAGGAGTAGAGGAGGTATC
AGTCATCGCTACGTTGCAGGCATTGCTTGGGCCCGAGAATTGCAAGGCCA
GGCTGGTCCGACTGCCTCAGGTCAAGTGGCAGGCCGAGTGGGAGGACGAA
GGCAGGCGACGATGGCACGAATCAAAGATGGCCAGCAAAGTAGACAGGGC
CGAGGCTCAGATGCGCGCTCTTGGTATCACGAGAGGACTGGTGGAGCACG
TCGCTGTCAGTCGATGAGTCAAGTGGCAGGCCGAGTGGGAGGACGAAGGC
AGGCGACGATGGCACGAATCAAAGATGGCCAGCAAAGTAGACAGGGCCGA
GGCTCAGATGCGCGCTCTTGGTATCACGAGAGGACTGGTGGAGCACGTCG
CTGTCAGTCGATGA
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