mRNA_H-paniculata_contig7712.15733.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7712.15733.1 vs. uniprot
Match: D8LR61_ECTSI (PA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR61_ECTSI) HSP 1 Score: 515 bits (1326), Expect = 7.040e-179 Identity = 249/342 (72.81%), Postives = 275/342 (80.41%), Query Frame = 1
Query: 1 QSMASRLQFPIPRKLYTPEGYVHEEALFGIPKYGGSIAERIIHGGVIDG-GMKSWTLCTTVEQSDFSPGDSDKPFILMVDRGDCTFASKVRRAQHMGASGVIIADNTCLCKDVEAGKCYKPERVDCEQVEPIMADDGSGADIAIPSFLMKKKDADLIKSTLQGGDNVQAEMTWSLPAPDDRVEWSLWTSAMDASAAAFKHDFKDVVKTLGTSAYFTPYYVIYDGDSYGCTGVCGTRCGNLCTNKGRYCMTDPDFDTSTGISGADVVRESLRQKCIWNIYGGESAPEADQGVGEKWWSYVNAFFSSCSVSNEQFSDESCILSAMKVAGVDSSKVKMCMEGAGG 1023
+S SRLQF IP LY EGY HEEALFGIPKYGG+IAERI+HGGV G +++WTLC+ + D +D PFILMVDRGDCTFASKVR+AQHMGA GVIIADNTCLCKD +G C K CEQVEPIMADDGSG DI IPSFLMKK DA LIK+ L+GG +VQAEMTWSLPAPDDRVEWSLWTSAMD SAA FK DFK+VVKTLG SA FTPYYV+Y+GDSYGCTG CG+LCTN GRYCMTDPDFDT G+SGADVVRESLRQKC+WN YGGE AP ADQGVGEKWWSYVN FFSSCSVS +F+DE+C+ AMK A VD + V CM +GG
Sbjct: 27 ESSGSRLQFTIPSVLYRDEGYAHEEALFGIPKYGGTIAERIVHGGVDPGQSVRTWTLCSDDDVKDVPMVPTDSPFILMVDRGDCTFASKVRKAQHMGAIGVIIADNTCLCKDEASGICNKSGDTPCEQVEPIMADDGSGGDITIPSFLMKKMDATLIKNRLEGGQSVQAEMTWSLPAPDDRVEWSLWTSAMDTSAAPFKRDFKEVVKTLGKSAQFTPYYVVYNGDSYGCTGGGANNCGSLCTNDGRYCMTDPDFDTKAGVSGADVVRESLRQKCVWNTYGGEDAPLADQGVGEKWWSYVNEFFSSCSVSGNRFNDENCVARAMKAAEVDKTVVDRCMSDSGG 368
BLAST of mRNA_H-paniculata_contig7712.15733.1 vs. uniprot
Match: A0A836CIN2_9STRA (PA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIN2_9STRA) HSP 1 Score: 403 bits (1035), Expect = 3.000e-134 Identity = 201/342 (58.77%), Postives = 249/342 (72.81%), Query Frame = 1
Query: 4 SMASRLQFPIPRKLYTPEGYVHEEALFGIPKYGGSIAERIIHGGVIDGGMKSWTLCTTVEQSDFSPGDSDKPFILMVDRG--DCTFASKVRRAQHMGASGVIIADNTCLCKDVEAGKCYKPERVDCEQVEPIMADDGSGADIAIPSFLMKKKDADLIKSTLQGGDNVQAEMTWSLPAPDDRVEWSLWTSAMDASAAAFKHDFKDVVKTLGTSAYFTPYYVIYDGDSYGCTGVCGTRCGNLCTNKGRYCMTDPDFDTSTGISGADVVRESLRQKCIWNIYGGESAPEADQGVGEKWWSYVNAFFSSCSVSNEQFSDESCILSAMKVAGVDSSKVKMCMEGAGG 1023
S +SRLQ IP +L+ GY H+EALFGIP YGGSIA+R+++ G D + + LC+ V+ + F+ + ++PFIL+VDRG DCTF SKVRRAQH+GA+G IIAD+ C C AG V CEQ+EPIMADDGSGADI IPSFLM K D DLIK L+ + +Q EMTWSLPAPDDRVEWSLWT+A+DA+AAAFK + DV LGT A+FTP+Y IYDG+ YGC CGNLCTN GRYC DPDFD +G+SGADV+RE+LRQKCIW YGG APEADQGVG KWWSYVN F + C + ++F+DE+C+ +AM G+D + + CM +GG
Sbjct: 4 SQSSRLQIQIPTELFRSAGYEHQEALFGIPHYGGSIAQRLVYPGDFD---QPYQLCSDVDAAKFTNPNPNQPFILLVDRGGADCTFVSKVRRAQHLGAAGAIIADDRCKC----AGDAQCDSSVACEQLEPIMADDGSGADITIPSFLMTKTDGDLIKEHLKLKEFLQVEMTWSLPAPDDRVEWSLWTTAIDAAAAAFKGEMADVAAALGTHAFFTPHYTIYDGEEYGCRDDTH-HCGNLCTNAGRYCNPDPDFDRDSGLSGADVIRETLRQKCIWLHYGGAQAPEADQGVGIKWWSYVNKFTTLC--NTDKFTDETCVAAAMSECGIDKTLIGRCMTDSGG 335
BLAST of mRNA_H-paniculata_contig7712.15733.1 vs. uniprot
Match: A0A835YNB1_9STRA (PA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNB1_9STRA) HSP 1 Score: 390 bits (1001), Expect = 8.200e-130 Identity = 193/340 (56.76%), Postives = 242/340 (71.18%), Query Frame = 1
Query: 10 ASRLQFPIPRKLYTPEGYVHEEALFGIPKYGGSIAERIIHGGVIDGGMKSWTLCTTVEQSDFSPGDSDKPFILMVDRG--DCTFASKVRRAQHMGASGVIIADNTCLCKDVEAGKCYKPERVDCEQVEPIMADDGSGADIAIPSFLMKKKDADLIKSTLQGGDNVQAEMTWSLPAPDDRVEWSLWTSAMDASAAAFKHDFKDVVKTLGTSAYFTPYYVIYDGDSYGCTGVCGTRCGNLCTNKGRYCMTDPDFDTSTGISGADVVRESLRQKCIWNIYGGESAPEADQGVGEKWWSYVNAFFSSCSVSNEQFSDESCILSAMKVAGVDSSKVKMCMEGAGG 1023
+SRLQ IP +L+ P GY H+EALFGIP YGG+IA+R+++ G +TLC+ E F + +PFIL+VDRG DCTF SKVRRAQH+GA+GVII D+ C+C D G C V C+ VEPIMADDGSGADI IPSFLM K D ++IKS LQ +QAEMTWSLPAPDDRVEWSLWTSA D++A AFK +F+DVV LGT AYFTP+Y++YDG+ YGC CGNLCTN GRYC DPDFD +G+SGAD+++E+LRQKCIW YGG+ A + +QG+GE+WW+YV F C + +F D SCI AM A ++ + CM+ +GG
Sbjct: 24 SSRLQIQIPTELFRPAGYAHQEALFGIPHYGGAIAQRLVYPGNY---TDPYTLCSDSEADKFV--NPAQPFILLVDRGGQDCTFVSKVRRAQHLGAAGVIIVDDRCICGD---GACASA--VACQPVEPIMADDGSGADITIPSFLMTKMDGNIIKSHLQANQFIQAEMTWSLPAPDDRVEWSLWTSAQDSAATAFKAEFRDVVTALGTHAYFTPHYIVYDGEEYGCRDDTN-HCGNLCTNAGRYCNPDPDFDRDSGLSGADIIQETLRQKCIWLHYGGDKASKGEQGIGERWWTYVQTFSKKCGMG--KFVDSSCISRAMSEAKINEKTINKCMDESGG 350
BLAST of mRNA_H-paniculata_contig7712.15733.1 vs. uniprot
Match: A0A4D9DEA6_9STRA (PA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DEA6_9STRA) HSP 1 Score: 369 bits (948), Expect = 8.730e-122 Identity = 187/337 (55.49%), Postives = 229/337 (67.95%), Query Frame = 1
Query: 13 SRLQFPIPRKLYTPEGYVHEEALFGIPKYGGSIAERIIHGGVIDGGMKSWTLCTTVEQSDFSPGDSDKPFILMVDRGDCTFASKVRRAQHMGASGVIIADNTCLCKDVEAGKCYKPERVDCEQVEPIMADDGSGADIAIPSFLMKKKDADLIKSTLQGGDNVQAEMTWSLPAPDDRVEWSLWTSAMDASAAAFKHDFKDVVKTLGTSAYFTPYYVIYDGDSYGCTGVCGTRCGNLCTNKGRYCMTDPDFDTSTGISGADVVRESLRQKCIWNIYGGESAPEADQGVGEKWWSYVNAFFSSCSVSNEQFSDESCILSAMKVAGVDSSKVKMCMEGAGG 1023
SRLQ IPR L+ P+GY H+EALFGIP YGG IAE++ + + +C+ + + S P+ILMVDRGDCTF +KVR AQH GASGV++ADN C+CKD+ C+ C+ +EPIMADDGSGADI IPSFL+ K DAD IK L+ VQ EMTWSLP PDDRVEWSLWTSA D+S+AA K +FK+ + LG YFTPYY +YDG +Y C CG+LCTN GRYCM DPD D G SG D+V E+LRQKCIWN YGGE+ + ++GVG WW YV F CS S+ +F+D +CI AM AGVD K++ CME AGG
Sbjct: 15 SRLQIQIPRDLFKPDGYNHKEALFGIPVYGGFIAEKLYY-------ANTTKMCSAPTADEVAQWKS--PYILMVDRGDCTFVTKVRHAQHAGASGVLVADNLCVCKDLA---CHPDPDTSCQGIEPIMADDGSGADITIPSFLLYKPDADAIKEKLRQESLVQVEMTWSLPTPDDRVEWSLWTSANDSSSAALKEEFKEAMAALGQHQYFTPYYQVYDGAAYNCVNF-PDHCGSLCTNHGRYCMPDPDKDPYHGYSGRDIVIENLRQKCIWNHYGGENTGK-EEGVGLPWWGYVREFTEKCSRSS-RFTDPNCIKEAMGAAGVDHKKIEACMEDAGG 336
BLAST of mRNA_H-paniculata_contig7712.15733.1 vs. uniprot
Match: A0A6V1XHF6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1XHF6_HETAK) HSP 1 Score: 365 bits (937), Expect = 2.440e-120 Identity = 191/345 (55.36%), Postives = 230/345 (66.67%), Query Frame = 1
Query: 10 ASRLQFPIPRKLYTPEGYVHEEALFGIPKYGGSIAERIIHGGVIDGGMKSWTLCTTVEQSDFSP-------GDSDKPFILMVDRGDCTFASKVRRAQHMGASGVIIADNTCLCKDVEAGKCYKPERVDCEQVEPIMADDGSGADIAIPSFLMKKKDADLIKSTLQGGDNVQAEMTWSLPAPDDRVEWSLWTSAMDASAAAFKHDFKDVVKTLGTSAYFTPYYVIYDGDSYGCTGVCGTRCGNLCTNKGRYCMTDPDFDTSTGISGADVVRESLRQKCIWNIYGGESAPEADQGVGEKWWSYVNAFFSSCSVSNEQFSDESCILSAMKVAGVDSSKVKMCMEGAGG 1023
+SRLQ IP L GY H++ALFG P YGGSI+ ++ + + LC E +D P + + PFILM DRGDCTF SKVRRAQH GA+GV+IADN CLC D C E CE +EPIMADDGSGADI IP+FLMKK DADL+K + G V AEM+W+LP PDDRVEW LWT+A+D A FK DF+ V LG AYFTP+YV+YDG+ CT +CGNLCTN+GRYC+ DPD D GISGADVV E+LRQ CIW YGG++A +AD GVG KWW YVN F ++C+ E+F+ +C + MK AGVDSSKV CM AGG
Sbjct: 28 SSRLQMQIPASLEREGGYAHQQALFGKPSYGGSISLQLFY--------TNSALC---EGADADPTKWKRNTDNKEAPFILMADRGDCTFVSKVRRAQHAGAAGVLIADNKCLCGDAA---CTSQEA--CEPLEPIMADDGSGADITIPAFLMKKVDADLVKGQILQGQLVVAEMSWALPNPDDRVEWDLWTTAIDDGAQTFKQDFEVVTSKLGPRAYFTPHYVVYDGNELRCT-TASDKCGNLCTNQGRYCLPDPDNDRHKGISGADVVEENLRQLCIWRAYGGDAANQADIGVGTKWWRYVNGFQAACNTP-EKFASAACKANVMKQAGVDSSKVDKCMADAGG 354
BLAST of mRNA_H-paniculata_contig7712.15733.1 vs. uniprot
Match: A0A7S0AZC6_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AZC6_9STRA) HSP 1 Score: 329 bits (844), Expect = 4.260e-106 Identity = 178/346 (51.45%), Postives = 221/346 (63.87%), Query Frame = 1
Query: 4 SMASRLQFPIPRKLYTPEGYVHEEALFGIPKYGGSIAERIIHGG--VIDGGM---KSWTLCTTVEQSDFSPGDSDKPFILMVDRGDCTFASKVRRAQHMGASGVIIADNTCLCKDVEAGKCYKPERVDCEQVEPIMADDGSGADIAIPSFLMKKKDADLIKSTLQGGDNVQAEMTWSLPAPDDRVEWSLWTSAMDASAAAFKHDFKDVVKTLGTSAYFTPYYVIYDGDSYGCTGVCGTR-CGNLCTNKGRYCMTDPDFDTSTGISGADVVRESLRQKCIWNIYGGESAPEADQGVGEKWWSYVNAFFSSCSVSNEQFSDESCILSAMKVAGVDSSKVKMCMEGAGG 1023
S++S+LQ IP+ L P GY H EALFG+P YGGS+ + + + + D + K + + + + P S P+ILMVDRG CTF KVR AQ GA+GVIIADNTCLC ++ C+ DCE EPIMADDGSGADI+IPSFLM KKDAD +K+ L+ VQ EMTW+LP+PDDRVE+ LWT+ D + F+ FKDV LG AYFTP+ +YDG C G G C NLCTN GRYC TDPD D GISGADVVRESLR+ CIW YG E+D GVG++WW YV F C + F++E C+ A K AGVD +V+ CM +GG
Sbjct: 32 SISSKLQVHIPQTLNMPGGYDHREALFGVPPYGGSLQQNLYYADSDLCDPAVDTRKGYPIRSKDNDGNMQPWPS--PYILMVDRGGCTFVQKVRNAQRSGAAGVIIADNTCLCSAGDS--CHSDPGTDCETREPIMADDGSGADISIPSFLMFKKDADAVKAELRANHMVQIEMTWALPSPDDRVEYDLWTTPSDLVSRDFQKGFKDVATALGDRAYFTPHMYVYDGIKSHCQGADGENMCFNLCTNNGRYCATDPDNDLDHGISGADVVRESLRRICIWKHYG-----ESD-GVGKEWWDYVAEFLHRCDTP-DYFANEDCVADAYKHAGVDKDRVQRCMLDSGG 366
BLAST of mRNA_H-paniculata_contig7712.15733.1 vs. uniprot
Match: K0R5E7_THAOC (PA domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R5E7_THAOC) HSP 1 Score: 328 bits (840), Expect = 1.560e-105 Identity = 179/349 (51.29%), Postives = 221/349 (63.32%), Query Frame = 1
Query: 10 ASRLQFPIPRKLYTPEG-YVHEEALFGIPKYGGSIAERIIHG---------GVIDGGMKSWTLCTTVEQSDFSPGDSDKPFILMVDRGDCTFASKVRRAQHMGASGVIIADNTCLCKDVEAGKCYKPERVDCEQVEPIMADDGSGADIAIPSFLMKKKDADLIKSTLQGGDNVQAEMTWSLPAPDDRVEWSLWTSAMDASAAAFKHDFKDVVKTLGTSAYFTPYYVIYDGDSYGCTGVCGTR-CGNLCTNKGRYCMTDPDFDTSTGISGADVVRESLRQKCIWNIYGGESAPEADQGVGEKWWSYVNAFFSSCSVSNEQFSDESCILSAMKVAGVDSSKVKMCMEGAGG 1023
+S+LQ +P+ L G Y H EALFGIP YGGSIA+++ + GV GG + + E + P S P+ILMVDRG CTF KVR AQ +GA+GVIIADNTCLC +C+ DCE+ EPIMADDGSG+DI+IPSFLM K+DAD +K+ LQ +V+ EMTWSLP+PDDRVE+ LWT+ D + F+ DFK LG AYFTP IYDG GC G+ G C NLC+N GRYC TDPD D GISGADVV ESLR+ C+W +YG + GVG +WW YVN F C+ S E F+ + C+ AM A VD +KV CME +GG
Sbjct: 41 SSKLQIHVPKTLTKAGGGYAHREALFGIPPYGGSIAQQLYYADDTLCENKPGVTRGG---YPIRAKDESGEMMPWQS--PYILMVDRGGCTFVQKVRNAQRVGAAGVIIADNTCLCS--AGDQCHSDPGRDCEEREPIMADDGSGSDISIPSFLMFKEDADEVKAELQANHHVRIEMTWSLPSPDDRVEYELWTTPTDVISRDFQKDFKMAAVALGDRAYFTPQQYIYDGIRSGCQGIDGENDCFNLCSNNGRYCATDPDNDLDRGISGADVVGESLRRMCVWKLYGKKD------GVGTEWWDYVNEFLFRCN-SEEFFASKQCVSDAMGHARVDPAKVDACMEDSGG 375
BLAST of mRNA_H-paniculata_contig7712.15733.1 vs. uniprot
Match: B8CDN1_THAPS (PA domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CDN1_THAPS) HSP 1 Score: 324 bits (831), Expect = 4.680e-104 Identity = 174/339 (51.33%), Postives = 211/339 (62.24%), Query Frame = 1
Query: 31 IPRKLYTPEGYVHEEALFGIPKYGGSIAERIIHGGVIDGGMKSWTLCTTVEQSDFSPGDSD-------KPFILMVDRGDCTFASKVRRAQHMGASGVIIADNTCLCKDVEAGKCYKPERVDCEQVEPIMADDGSGADIAIPSFLMKKKDADLIKSTLQGGDNVQAEMTWSLPAPDDRVEWSLWTSAMDASAAAFKHDFKDVVKTLGTSAYFTPYYVIYDGDSYGCTGVCGTR-CGNLCTNKGRYCMTDPDFDTSTGISGADVVRESLRQKCIWNIYGGESAPEADQGVGEKWWSYVNAFFSSCSVSNEQFSDESCILSAMKVAGVDSSKVKMCMEGAGG 1023
+P+ L GY H EALFGIP YGGSIA+ + + + + T T DSD P+ILMVDRG C+F KVR AQ +GA+GVI+ADNTCLC ++ C+ DCEQ EPIMADDGSG+DI+IPSFLM K+DADL+K+ + V+ EM WSLP+PDDRVE+ LWT+ D + F+ DFK+ LG AYFTP IYDG GC GV G C NLCTN GRYC TDPD D GISGADVV+ESLR+ CIW YG D GVG WW YVN F C+ + E F++ CI AM+ A VD K+ CME +GG
Sbjct: 58 VPKTLTKQGGYDHREALFGIPPYGGSIAQNLYY---TEDSLCDATSINTRSGYPIRAKDSDGNMLPWPSPYILMVDRGGCSFTQKVRNAQRVGAAGVIMADNTCLCSAGDS--CHSDPGKDCEQREPIMADDGSGSDISIPSFLMFKQDADLVKAEVMANHVVRIEMQWSLPSPDDRVEYELWTTPTDTISRDFQKDFKEAAVALGKRAYFTPQMYIYDGIKSGCQGVDGENDCYNLCTNNGRYCATDPDNDLDRGISGADVVKESLRRMCIWQHYG------QDDGVGAAWWDYVNEFMFRCN-NEEYFANNQCIKDAMEHAKVDGGKIDECMEDSGG 384
BLAST of mRNA_H-paniculata_contig7712.15733.1 vs. uniprot
Match: A0A7S1CYT0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CYT0_CYCTE) HSP 1 Score: 322 bits (825), Expect = 1.140e-103 Identity = 175/348 (50.29%), Postives = 215/348 (61.78%), Query Frame = 1
Query: 4 SMASRLQFPIPRKLYTPEGYVHEEALFGIPKYGGSIAERIIHGGVIDGGMKSWTLCTTVEQSDFSPG-------DSDKPFILMVDRGDCTFASKVRRAQHMGASGVIIADNTCLCKDVEAGKCYKPERVDCEQVEPIMADDGSGADIAIPSFLMKKKDADLIKSTLQGGDNVQAEMTWSLPAPDDRVEWSLWTSAMDASAAAFKHDFKDVVKTLGTSAYFTPYYVIYDGDSYGCTGVCGTR-CGNLCTNKGRYCMTDPDFDTSTGISGADVVRESLRQKCIWNIYGGESAPEADQGVGEKWWSYVNAFFSSCSVSNEQFSDESCILSAMKVAGVDSSKVKMCMEGAGG 1023
+++S+L IPR LY EGY H EALFG+P YGGSIA+ + + ++S LC +D S G D PFILM +RGDCTF KVR AQH GA+GVIIAD TCLC+D E + + DCE EPIMADDGSGADI+IPSFLM K DAD +K L+ VQ +M+WSLP PDDRVE+ LWT + + F+ +FK++ LG AYFTP+ IYDG+ C G G+ C LCTN GRYC TDPD D GISGADVV ESLR+ CIW YG D G+G WW YV F CS E F+++ CI A A +D V+ CM+ +GG
Sbjct: 6 NVSSKLMVQIPRSLYKEEGYDHREALFGVPPYGGSIAQNVYY-------VES-DLCDP--NADISKGFPSGKGKGRDGPFILMANRGDCTFVKKVRTAQHKGAAGVIIADTTCLCQDTECMEAQGSQ--DCEPSEPIMADDGSGADISIPSFLMFKHDADKVKQVLKMDKPVQIKMSWSLPTPDDRVEYDLWTVPTEEVSLEFQQNFKELAVALGKHAYFTPHMYIYDGERSNCKGSDGSNMCYTLCTNNGRYCATDPDNDLDKGISGADVVEESLRRLCIWQRYG------KDDGIGVHWWDYVTEFHKRCS-KPEYFTNKDCIEDAYNHAKIDGISVEQCMDDSGG 334
BLAST of mRNA_H-paniculata_contig7712.15733.1 vs. uniprot
Match: A0A1E7F741_9STRA (PA domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F741_9STRA) HSP 1 Score: 320 bits (820), Expect = 1.530e-102 Identity = 177/348 (50.86%), Postives = 216/348 (62.07%), Query Frame = 1
Query: 4 SMASRLQFPIPRKLYTPEGYVHEEALFGIPKYGGSIAERIIHGGVIDGGMKSWTLCTTV----EQSDFSPGDS---DKPFILMVDRGDCTFASKVRRAQHMGASGVIIADNTCLCKDVEAGKCYKPERVDCEQVEPIMADDGSGADIAIPSFLMKKKDADLIKSTLQGGDNVQAEMTWSLPAPDDRVEWSLWTSAMDASAAAFKHDFKDVVKTLGTSAYFTPYYVIYDGDSYGCTGVCGTR-CGNLCTNKGRYCMTDPDFDTSTGISGADVVRESLRQKCIWNIYGGESAPEADQGVGEKWWSYVNAFFSSCSVSNEQFSDESCILSAMKVAGVDSSKVKMCMEGAGG 1023
+++SRL IP L+ EGY H EALFGIP YGGSIA+ + + D + + TT + D G + P+ILMV+RG+CTF KVR AQ GA+GVIIADNTCLC DVE + + CE EPIMADDGSG+DI+IPSFLM K DAD +K L VQ EM+WSLP PDDRVE+ LW++ D + F +FK + K LG AYFTP+ IYDG C G G C NLCTN GRYC TDPD D GISGADVV+ESLR+ CIW YG E+D GVGE WW+YV F + C+ + + F +E C+ K A VD KV CM +GG
Sbjct: 25 NVSSRLMIHIPHSLFKEEGYDHREALFGIPPYGGSIAQNVYYA---DDDLCDPNVDTTKGYPRREKDDKTGKMPAWESPYILMVNRGECTFVKKVRNAQRSGAAGVIIADNTCLCSDVECIEAA--DNPTCETSEPIMADDGSGSDISIPSFLMFKHDADKVKERLMDDQPVQLEMSWSLPNPDDRVEYDLWSTPTDVVSKQFLTEFKPISKALGDRAYFTPHMYIYDGVKTHCQGNDGENFCYNLCTNNGRYCATDPDNDLDQGISGADVVKESLRRLCIWKHYG-----ESD-GVGETWWNYVEEFMARCNTA-DYFMNEDCVKDCYKHAKVDGEKVDRCMSDSGG 360 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7712.15733.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7712.15733.1 >prot_H-paniculata_contig7712.15733.1 ID=prot_H-paniculata_contig7712.15733.1|Name=mRNA_H-paniculata_contig7712.15733.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=339bp MASRLQFPIPRKLYTPEGYVHEEALFGIPKYGGSIAERIIHGGVIDGGMKback to top mRNA from alignment at H-paniculata_contig7712:4293..10886+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7712.15733.1 ID=mRNA_H-paniculata_contig7712.15733.1|Name=mRNA_H-paniculata_contig7712.15733.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6594bp|location=Sequence derived from alignment at H-paniculata_contig7712:4293..10886+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7712:4293..10886+ >mRNA_H-paniculata_contig7712.15733.1 ID=mRNA_H-paniculata_contig7712.15733.1|Name=mRNA_H-paniculata_contig7712.15733.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2034bp|location=Sequence derived from alignment at H-paniculata_contig7712:4293..10886+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |