mRNA_H-paniculata_contig7711.15732.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig7711.15732.1
Unique NamemRNA_H-paniculata_contig7711.15732.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig7711.15732.1 vs. uniprot
Match: D8LRL2_ECTSI (Pterin-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRL2_ECTSI)

HSP 1 Score: 317 bits (812), Expect = 3.560e-99
Identity = 167/236 (70.76%), Postives = 188/236 (79.66%), Query Frame = 2
Query:    2 RPGASEVSTEEEISRVVPVIEGIVRATQEHESSXXXXXXXXXQPSTQATVTISVDTRQAEVARAAVAAGAHVVNDVSGGTFDPEMLSTVAELGVPLTMMHMRGTPQTMTSLTDYGGDVVGDVCDKLEGCSRAAERAGIPRWMHVLDPGIGFAKSQSQSLLLLRKLDVIGARVKAPLLVGPSRKRFIGELTGEKEASQRDWGTVGACCASAERGAKIVRVHNVRVVVQALAVADAIR 709
            RPGA+EVS EEEISRVVPVIEGI  A     +             T   VTI+VDTR+A VA AAVAAGA  VNDVSGGTFDP+ML+TVA  GVPL MMHMRGTPQTMTSLTDYGG+VVG+V   LE CSRAA+ AG+PRWMHVL+PGIGFAK+ SQSLLL+R+LDVI   V +PLLVGPSRKRFIGELT E +  QRDWGTVGACC++AERGAK+VRVHNV+  V ALAV+DAIR
Sbjct:  345 RPGAAEVSPEEEISRVVPVIEGIRDAAT---AGGEAAAGEGDDADTIGPVTITVDTRRAAVAEAAVAAGADAVNDVSGGTFDPQMLATVARTGVPLMMMHMRGTPQTMTSLTDYGGNVVGEVSQSLEACSRAADIAGVPRWMHVLNPGIGFAKTHSQSLLLMRELDVIAKHVGSPLLVGPSRKRFIGELTSESDPIQRDWGTVGACCSAAERGAKLVRVHNVKGAVLALAVSDAIR 577          
BLAST of mRNA_H-paniculata_contig7711.15732.1 vs. uniprot
Match: A0A6H5JQ34_9PHAE (Pterin-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ34_9PHAE)

HSP 1 Score: 269 bits (687), Expect = 1.730e-82
Identity = 153/243 (62.96%), Postives = 176/243 (72.43%), Query Frame = 2
Query:    5 PGASEVSTEEEISRVVPVIEGIVRATQ---EHESSXXXXXXXXXQPSTQATVTISVDTRQAEVARAAVAAGAHVVNDVSGGTFDPEMLSTVAELGVPLTMMHMRGTPQTMTSLTDYGGDVVGDVCDKLEGCSRAAERAGIPRWMHVLDPGIGFAKSQSQSLLLLRKLDVIGARVKAPLLVGPSRKRFIGELTGEKEASQRDWGTVGACCASAERGAKIVRVHNVRVVVQALAVADAIRGAASE 724
            PGA+EVS EEEISRVVPVI+GI  A     E  +      XXXX  +T   VTI+VDTR+A VA AA+AAGA  VNDVSGGTFDP ML+TVA  GVPL MMHMRGTPQTMTSLTDYGG++VG+V   LE CSRAA+ +G+P                  SLLL+R+LDVI   V +PLLVGPSRKRFIGELT E +  QRDWGTVGACC++AERG K+VRVHNV+  VQALAVADAIR    +
Sbjct:  190 PGAAEVSPEEEISRVVPVIQGIRAAATAGGEAAAGEGDDCXXXXXXATIGPVTITVDTRRAAVAEAALAAGADAVNDVSGGTFDPRMLATVARAGVPLVMMHMRGTPQTMTSLTDYGGNIVGEVSYSLEACSRAADISGVP------------------SLLLMRQLDVIAKHVGSPLLVGPSRKRFIGELTSESDPVQRDWGTVGACCSAAERGVKLVRVHNVKGAVQALAVADAIRNEGKD 414          
BLAST of mRNA_H-paniculata_contig7711.15732.1 vs. uniprot
Match: A0A7S1GH06_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GH06_CYCTE)

HSP 1 Score: 219 bits (557), Expect = 5.920e-65
Identity = 123/247 (49.80%), Postives = 161/247 (65.18%), Query Frame = 2
Query:    2 RPGASEVSTEEEISRVVPVIEGIVRATQEHESSXXXXXXXXXQPSTQATVTISVDTRQAEVARAAVAAGAHVVNDVSGGTFDPEMLSTVAELGVPLTMMHMRGTPQTMTSLTDYGGDVVGDVCDKLEGCSRAAERAGIPRWMHVLDPGIGFAKSQSQSLLLLRKLDVIGARV-KAPLLVGPSRKRFIGELTGEKEASQRDWGTVGACCAS-----AERGAKIVRVHNVRVVVQALAVADAIRGAASE 724
            RPGA EV+ EEE+ R +PVI  I   ++                     + IS+DTR A+VA+AAV AGA +VND+SGG FD  ML+TVAELGVP+ +MHMRGTP+ M S+TDY  DVV DVC+ L   S+AAE AGIPRW  V+DPGIGFAK    +LLLL+ L  + +++   P+L+G SRK FIG++TGE  A++RDWGTV +C A+     +  G  I+RVHNV+   QA    DAI  A ++
Sbjct:   45 RPGAKEVAVEEELRRTIPVIRRIRELSE---------------------IPISIDTRHADVAKAAVEAGADIVNDISGGQFDENMLATVAELGVPVILMHMRGTPENMLSMTDYD-DVVEDVCEALLERSQAAEAAGIPRWRQVMDPGIGFAKDLRGNLLLLKNLRYLQSKLGDFPILLGTSRKGFIGKITGEPIAAERDWGTVASCVAALCLGDSSPGCHILRVHNVKGTKQATMTMDAIVRAEND 269          
BLAST of mRNA_H-paniculata_contig7711.15732.1 vs. uniprot
Match: A0A7S4EKT2_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EKT2_9STRA)

HSP 1 Score: 217 bits (552), Expect = 8.410e-63
Identity = 130/250 (52.00%), Postives = 157/250 (62.80%), Query Frame = 2
Query:    2 RPGASEVSTEEEISRVVPVIEGIVRATQEHESSXXXXXXXXXQPSTQATVTISVDTRQAEVARAAVAAGAHVVNDVSGGTFDPEMLSTVAELGVPLTMMHMRGTPQTMTSLTDYG--GDVVGDVCDKLEGCSRAAERAGIPRWMHVLDPGIGFAKSQSQSLLLLRKLDVIGARV-KAPLLVGPSRKRFIGELTGEKEASQRDWGTVGACCASA---------ERGAKIVRVHNVRVVVQALAVADAIRGA 715
            RPGA+E+  EE+I R VPVI+ I   ++E                    V +S+DTR A+VARAAV AGA +VNDVSGGT DP MLSTVA+L VP+ +MHMRGTP+ M  LTDY   G VV  V   L   S+AAE AGIPRWM VLDPGIGFAK    +L LL+    +  ++   PLL+G SRK FIG+LTGE EA +RD+GTVG+C AS            G  I+RVHNV+   QA AV DAI  A
Sbjct:  156 RPGATEIPVEEQIRRTVPVIQSIRERSKE--------------------VVVSIDTRHADVARAAVEAGADIVNDVSGGTHDPNMLSTVADLQVPIVLMHMRGTPELMQRLTDYDDQGGVVDGVIGALLERSQAAEAAGIPRWMQVLDPGIGFAKDLDGNLSLLKNYSDLRTKLGDFPLLLGTSRKGFIGKLTGETEAEKRDFGTVGSCIASLCLGNRGNDNSLGCNILRVHNVKGAKQATAVMDAIVAA 385          
BLAST of mRNA_H-paniculata_contig7711.15732.1 vs. uniprot
Match: A0A7S0C3W2_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C3W2_9STRA)

HSP 1 Score: 211 bits (536), Expect = 2.770e-62
Identity = 122/246 (49.59%), Postives = 156/246 (63.41%), Query Frame = 2
Query:    2 RPGASEVSTEEEISRVVPVIEGIVRATQEHESSXXXXXXXXXQPSTQATVTISVDTRQAEVARAAVAAGAHVVNDVSGGTFDPEMLSTVAELGVPLTMMHMRGTPQTMTSLTDYGGDVVGDVCDKLEGCSRAAERAGIPRWMHVLDPGIGFAKSQSQSLLLLR----KLDVIGARVKAPLLVGPSRKRFIGELTGEKEASQRDWGTVGACCASAERG----AKIVRVHNVRVVVQALAVADAIRGA 715
            RPGA E++ EEE+ RVVPVI  + + +                      V IS+DTR + VA+AA+AAGA +VNDVSGGTFD EMLSTV++L VP+ +MHMRGTP+TM ++T Y  +VV DV   L+  S+ A  AGIP+W+ VLD GIGFAK    +L LLR    ++        A LL GPSRK F+G +TGEK A +RD+GT  ACC +   G      I+RVHNV+ V QA+ V DAIRGA
Sbjct:   17 RPGAKEIAIEEELHRVVPVILSLRKVSN---------------------VPISIDTRHSHVAKAAIAAGADIVNDVSGGTFDEEMLSTVSKLSVPMILMHMRGTPETMQTMTSYS-NVVNDVAHSLKKLSQRASDAGIPKWLQVLDVGIGFAKDYHGNLELLRYGPGRVREYMGDDTAMLLWGPSRKGFLGTITGEKVAEKRDYGTTAACCMAVATGPLGACNIIRVHNVKDVKQAIQVMDAIRGA 240          
BLAST of mRNA_H-paniculata_contig7711.15732.1 vs. uniprot
Match: A0A835YYJ5_9STRA (Dihydropteroate synthase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYJ5_9STRA)

HSP 1 Score: 220 bits (560), Expect = 2.840e-62
Identity = 130/268 (48.51%), Postives = 154/268 (57.46%), Query Frame = 2
Query:    2 RPGASEVSTEEEISRVVPVIEGIVRATQEHESSXXXXXXXXXQPSTQATVTISVDTRQAEVARAAVAAGAHVVNDVSGGTFDPEMLSTVAELGVPLTMMHMRGTPQTMTSLTDYGGDVVGDVCDKLEGCSRAAERAGIPRWMHVLDPGIGFAKSQSQSLLLLRKLDVIGARVKAPLLVGPSRKRFIGELTGEKEA----------------------------SQRDWGTVGACCASAERGAKIVRVHNVRVVVQALAVADAIRGAAS 721
            RPGA +V    E+ RVVPV+  +  A                      T  ISVDTR+A VAR AV AGA +VNDVSGG  D  ML+ VAELGVP   MHMRGTP+TMT++TDY  DVVGDV   L   S  AE AG+PRW+ VLDPG+GFAK+  QS+ LL  L  + A  + PLLVGPSRKRF+G + G                                  RDWGT GA CA+AERGA+IVRVH+VR V  AL V DA+R A +
Sbjct:  294 RPGADDVEEAIELERVVPVVAALRAAG--------------------VTTPISVDTRRAAVARGAVRAGADLVNDVSGGAHDGAMLAAVAELGVPYVAMHMRGTPKTMTAMTDYA-DVVGDVTQALSAASARAEAAGVPRWLQVLDPGLGFAKTAPQSVQLLAGLVRVAAATRCPLLVGPSRKRFVGAVAGGXXXXXXXXXXXXXXXXXXXXXXXXXGNALTLEDRDWGTAGAACAAAERGARIVRVHHVRGVKHALRVVDAVRVAEA 540          
BLAST of mRNA_H-paniculata_contig7711.15732.1 vs. uniprot
Match: UPI0019FC1E0A (Dihydropteroate synthase n=1 Tax=Oscillatoriaceae cyanobacterium M7585_C2015_266 TaxID=2774341 RepID=UPI0019FC1E0A)

HSP 1 Score: 209 bits (531), Expect = 5.780e-61
Identity = 122/235 (51.91%), Postives = 154/235 (65.53%), Query Frame = 2
Query:    2 RPGASEVSTEEEISRVVPVIEGIVRATQEHESSXXXXXXXXXQPSTQATVTISVDTRQAEVARAAVAAGAHVVNDVSGGTFDPEMLSTVAELGVPLTMMHMRGTPQTMTSLTDYGGDVVGDVCDKLEGCSRAAERAGIPRWMHVLDPGIGFAKSQSQSLLLLRKLDVIGARVKAPLLVGPSRKRFIGELTGEKEASQRDWGTVGACCASAERGAKIVRVHNVRVVVQALAVADAI 706
            RPGA+EV  EEE++RVVPV    VRA  E  S                 V ISVDT +AEVARAAV AGA +VND+S  TFDP+MLS VAELGVPL +MH+RGTPQTM  LTDY  D++ ++   L+   +AA+ AGIPR   ++DPGIGFAK+ SQ+L +LR+L      +  PLLVGPSRK FIG +  +     R WGT  ACCA+   GA ++RVH+V+ + +   VADAI
Sbjct:   69 RPGATEVPLEEELARVVPV----VRALSETLS-----------------VPISVDTTRAEVARAAVEAGASLVNDISAATFDPQMLSVVAELGVPLILMHIRGTPQTMQQLTDYK-DLIAEILQFLDSRIQAAQAAGIPRKHLLVDPGIGFAKTFSQNLEILRRLGEFHT-LNCPLLVGPSRKSFIGHILNQPNPKARVWGTAAACCAAIAAGADLLRVHDVQQMQEVCRVADAI 280          
BLAST of mRNA_H-paniculata_contig7711.15732.1 vs. uniprot
Match: A0A3M1T6I9_9CYAN (Dihydropteroate synthase n=1 Tax=Cyanobacteria bacterium J055 TaxID=2420338 RepID=A0A3M1T6I9_9CYAN)

HSP 1 Score: 205 bits (521), Expect = 1.270e-59
Identity = 124/235 (52.77%), Postives = 154/235 (65.53%), Query Frame = 2
Query:    2 RPGASEVSTEEEISRVVPVIEGIVRATQEHESSXXXXXXXXXQPSTQATVTISVDTRQAEVARAAVAAGAHVVNDVSGGTFDPEMLSTVAELGVPLTMMHMRGTPQTMTSLTDYGGDVVGDVCDKLEGCSRAAERAGIPRWMHVLDPGIGFAKSQSQSLLLLRKLDVIGARVKAPLLVGPSRKRFIGELTGEKEASQRDWGTVGACCASAERGAKIVRVHNVRVVVQALAVADAI 706
            RPGA EVS EEE++RVVPV    VRA +E  S                 + ISVDT ++ VARAAVAAGA  VNDV+GGT DP+ML+TVAELGVP+ +MH+RGTPQTM +LTDY  DVVG++C  LE  + AA  AG+ R   VLDPGIGFAK+  Q+L +LR+L  + + +  PLLVG SRK FIG +       +R WGT  AC A+   GA I+RVH+VR +     V DAI
Sbjct:   58 RPGAIEVSLEEELNRVVPV----VRALRECSS-----------------IAISVDTSRSIVARAAVAAGADWVNDVTGGTGDPQMLATVAELGVPVVLMHLRGTPQTMQTLTDYE-DVVGEICQVLERQANAAIAAGVDRGAIVLDPGIGFAKTYEQNLTILRELPKVRS-LGYPLLVGVSRKSFIGHILDRPNPKERVWGTGAACAAAIVGGADILRVHDVREMRDICRVTDAI 269          
BLAST of mRNA_H-paniculata_contig7711.15732.1 vs. uniprot
Match: A0A0C1YCU8_9CYAN (Dihydropteroate synthase n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A0C1YCU8_9CYAN)

HSP 1 Score: 205 bits (522), Expect = 2.020e-59
Identity = 117/235 (49.79%), Postives = 153/235 (65.11%), Query Frame = 2
Query:    2 RPGASEVSTEEEISRVVPVIEGIVRATQEHESSXXXXXXXXXQPSTQATVTISVDTRQAEVARAAVAAGAHVVNDVSGGTFDPEMLSTVAELGVPLTMMHMRGTPQTMTSLTDYGGDVVGDVCDKLEGCSRAAERAGIPRWMHVLDPGIGFAKSQSQSLLLLRKLDVIGARVKAPLLVGPSRKRFIGELTGEKEASQRDWGTVGACCASAERGAKIVRVHNVRVVVQALAVADAI 706
            RPGA+++S E E  RV+PVIE I RA+ + + S                V ISVDT QA VARAAV AGA +VND+SGGTFD  M STVA+LGVP+ +MH+RGTP TM   TDY  D++G++ D LE     A+ AG+      +DPGIGFAK+  Q+L +LR++ V+  ++  P+L+GPSRK FIG L  + +  QR WGT  ACCA+   GA I+RVH+   +VQ   VADAI
Sbjct:   70 RPGAAQISIEAEQQRVIPVIEAI-RASDDPQLSQ---------------VVISVDTTQAAVARAAVRAGADLVNDISGGTFDAAMFSTVADLGVPIILMHIRGTPTTMQQHTDYA-DLIGEIYDFLERQIETAQAAGVGHHQIAIDPGIGFAKTYPQNLEILRQIPVL-RQLHCPILIGPSRKSFIGWLLNQPDPQQRVWGTAAACCAAIAGGADIIRVHDGDEMVQVAKVADAI 286          
BLAST of mRNA_H-paniculata_contig7711.15732.1 vs. uniprot
Match: A0A349JM82_9CYAN (Dihydropteroate synthase n=3 Tax=Microcoleaceae TaxID=1892252 RepID=A0A349JM82_9CYAN)

HSP 1 Score: 205 bits (521), Expect = 2.110e-59
Identity = 115/235 (48.94%), Postives = 154/235 (65.53%), Query Frame = 2
Query:    2 RPGASEVSTEEEISRVVPVIEGIVRATQEHESSXXXXXXXXXQPSTQATVTISVDTRQAEVARAAVAAGAHVVNDVSGGTFDPEMLSTVAELGVPLTMMHMRGTPQTMTSLTDYGGDVVGDVCDKLEGCSRAAERAGIPRWMHVLDPGIGFAKSQSQSLLLLRKLDVIGARVKAPLLVGPSRKRFIGELTGEKEASQRDWGTVGACCASAERGAKIVRVHNVRVVVQALAVADAI 706
            RPGA+E+S EEEI RV+PV+E + +                      A + ISVDT +A+VA+AAVAAGA ++ND+SG TFD EMLSTVA+L VP+ +MH+RGTPQTM  LTDY  D++G++ + LE    AA  AGI +   ++DPGIGFAK+ SQ+L +LR+L    + +  P+LVG SRK FIG++  + EA QR WGT  AC  +    A I+RVH+VR +     VADAI
Sbjct:   69 RPGAAEISLEEEIDRVIPVVEMLRQKADIF-----------------AAIPISVDTTRADVAQAAVAAGADIINDISGATFDSEMLSTVAKLAVPIILMHLRGTPQTMQKLTDYR-DLIGEITEFLESRIAAALAAGIDKSQIIIDPGIGFAKTYSQNLEILRELPKFRS-LNCPILVGVSRKSFIGQILNQPEAKQRVWGTAAACTGAIANSADILRVHDVREMHDVCQVADAI 284          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7711.15732.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRL2_ECTSI3.560e-9970.76Pterin-binding domain-containing protein n=1 Tax=E... [more]
A0A6H5JQ34_9PHAE1.730e-8262.96Pterin-binding domain-containing protein n=1 Tax=E... [more]
A0A7S1GH06_CYCTE5.920e-6549.80Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S4EKT2_9STRA8.410e-6352.00Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S0C3W2_9STRA2.770e-6249.59Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A835YYJ5_9STRA2.840e-6248.51Dihydropteroate synthase-like protein n=1 Tax=Trib... [more]
UPI0019FC1E0A5.780e-6151.91Dihydropteroate synthase n=1 Tax=Oscillatoriaceae ... [more]
A0A3M1T6I9_9CYAN1.270e-5952.77Dihydropteroate synthase n=1 Tax=Cyanobacteria bac... [more]
A0A0C1YCU8_9CYAN2.020e-5949.79Dihydropteroate synthase n=2 Tax=Cyanobacteria Tax... [more]
A0A349JM82_9CYAN2.110e-5948.94Dihydropteroate synthase n=3 Tax=Microcoleaceae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7711contigH-paniculata_contig7711:2239..6706 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score236.9
Seed ortholog evalue6.5e-60
Seed eggNOG ortholog2880.D8LRL2
Preferred nameFOL1
KEGG rclassRC00002,RC00017,RC00121,RC00721,RC00842,RC00943
KEGG koko:K13939,ko:K13941
KEGG ReactionR03066,R03067,R03503,R03504
KEGG Pathwayko00790,ko01100,map00790,map01100
KEGG ModuleM00126,M00840
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003848,GO:0004150,GO:0004156,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016772,GO:0016778,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019752,GO:0031967,GO:0031975,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
EggNOG OGsCOG0294@1,KOG2544@2759
EC2.5.1.15,2.7.6.3,4.1.2.25
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons5
Model size1324
Cds size474
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930956.4147527-UTR-H-paniculata_contig7711:2238..28351622930956.4147527-UTR-H-paniculata_contig7711:2238..2835Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7711 2239..2835 -
1691481526.784655-UTR-H-paniculata_contig7711:2238..28351691481526.784655-UTR-H-paniculata_contig7711:2238..2835Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7711 2239..2835 -
1622930956.5049188-UTR-H-paniculata_contig7711:6453..67061622930956.5049188-UTR-H-paniculata_contig7711:6453..6706Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7711 6454..6706 -
1691481526.847321-UTR-H-paniculata_contig7711:6453..67061691481526.847321-UTR-H-paniculata_contig7711:6453..6706Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7711 6454..6706 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930956.4275665-CDS-H-paniculata_contig7711:2835..29971622930956.4275665-CDS-H-paniculata_contig7711:2835..2997Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7711 2836..2997 -
1691481526.8004587-CDS-H-paniculata_contig7711:2835..29971691481526.8004587-CDS-H-paniculata_contig7711:2835..2997Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7711 2836..2997 -
1622930956.442997-CDS-H-paniculata_contig7711:4430..45211622930956.442997-CDS-H-paniculata_contig7711:4430..4521Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7711 4431..4521 -
1691481526.808799-CDS-H-paniculata_contig7711:4430..45211691481526.808799-CDS-H-paniculata_contig7711:4430..4521Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7711 4431..4521 -
1622930956.4627624-CDS-H-paniculata_contig7711:5049..51031622930956.4627624-CDS-H-paniculata_contig7711:5049..5103Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7711 5050..5103 -
1691481526.81823-CDS-H-paniculata_contig7711:5049..51031691481526.81823-CDS-H-paniculata_contig7711:5049..5103Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7711 5050..5103 -
1622930956.4751568-CDS-H-paniculata_contig7711:5731..58451622930956.4751568-CDS-H-paniculata_contig7711:5731..5845Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7711 5732..5845 -
1691481526.8282523-CDS-H-paniculata_contig7711:5731..58451691481526.8282523-CDS-H-paniculata_contig7711:5731..5845Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7711 5732..5845 -
1622930956.4869683-CDS-H-paniculata_contig7711:6400..64531622930956.4869683-CDS-H-paniculata_contig7711:6400..6453Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7711 6401..6453 -
1691481526.837871-CDS-H-paniculata_contig7711:6400..64531691481526.837871-CDS-H-paniculata_contig7711:6400..6453Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7711 6401..6453 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7711.15732.1prot_H-paniculata_contig7711.15732.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig7711 2836..6453 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig7711.15732.1

>prot_H-paniculata_contig7711.15732.1 ID=prot_H-paniculata_contig7711.15732.1|Name=mRNA_H-paniculata_contig7711.15732.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=158bp
MLSTVAELGVPLTMMHMRGTPQTMTSLTDYGGDVVGDVCDKLEGCSRAAE
RAGIPRWMHVLDPGIGFAKSQSQSLLLLRKLDVIGARVKAPLLVGPSRKR
FIGELTGEKEASQRDWGTVGACCASAERGAKIVRVHNVRVVVQALAVADA
IRGAASE*
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mRNA from alignment at H-paniculata_contig7711:2239..6706-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig7711.15732.1 ID=mRNA_H-paniculata_contig7711.15732.1|Name=mRNA_H-paniculata_contig7711.15732.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4468bp|location=Sequence derived from alignment at H-paniculata_contig7711:2239..6706- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGCCGGGGGCAAGTGAGGTATCAACAGAGGAAGAAATTTCTCGCGTCG TGCCGGTTATCGAGGGCATAGTACGCGCAACACAAGAACACGAAAGCAGC AGCAGCAGCAGCAGTAACAAGGAGGATCAGCCGTCAACGCAAGCAACAGT CACGATAAGCGTTGACACCCGTCAGGCAGAGGTAGCTAGGGCGGCCGTTG CAGCTGGGGCGCACGTGGTGAATGACGTGTCTGGGGGAACGTTTGATCCT GAAATGCTCAGCACCGTCGCGGAACTGGGGGTGCCTTTGACCATGATGCA CATGCGGTTAGTGACATTTGTTTCGTAGGGGCCGGGTTCTGCTCTTGGCC CTGGGTTGTTCGAGGTTTGGTTTGTTAACAGGATAATTTGGTATAGGGGG GTTCATGGTCTAACTTGCGGTGTCAATGGTGACCGGAGGGGAAGGTGCTG GACAATACAGAGAACCACATGTGATACACGCGCAGCTTCGTATTACCAAA CAAGAAGCCATTGCATATGCTGAAGTGAAACACACTGATTGGATGCACAC GTGGTTACTGGAGTACGGTCTACATATACAACCTTGAGAGCAGGCGTGTT TATTTCGTACGTCAAAACACGGCGATGAGAACTGGAGTACACCACGAACG AACAACACAGCAATGCAGCATTAATTTTCAACGACTAGGGTGACAATTTT TTTCAATTGCACTTGAGAATCGATCTCTCGTAATACTTCACGTTGTCTAC GATAACATCTTCTGCTCCCGTGATTGTTTTGGAGCTGTACAGTTCAGTTG TATTCCAATTTTTTTCGCCTTTTGTTGACGTTTGAATTCCCCCCCCCCCC CCGTCATTCAGTGGTACCCCTCAGACGATGACGTCATTGACGGACTACGG GGGAGACGTAGTGGGCGACGTTTGTGACAAGCTCGAGGGATGTAGCAGGG CTGCTGAAAGAGCAGGGATACCCAGGTACGCTAAAAATCCATCCAGGGTA CTGTTTTCTGAGACAGGGAGAAGCGGGAGTGGCTGCGGCATCTATAATAG CAAAGTGCGAGAAAAATATGCTTCCAATACAATCACCAAACCATATCGAT CGGGTTGTTTTAGACGTGACGAGCTTGCTATATATATATATTAATGCTGC TCATTGTACGTGTGCATGATACGGCAGCTAACCGAAAGATACAGTTTTTA AAGGGGGCTTGTTGGTCGAGTAGTTTCCTGTGTTGAAATGTTTTGGATGC GATCTAATTAACGCAGAGCAGCCCTAACATTTGTTTTTGTTCACTGCTTG GGACACTAACTAATCCGTATTCGCGCACAACCATCCTACAACTATTGTAG GTAACTCATCCACGAAACGTCGATTGGAGTGGCAAAGGGGGATGGAAGAT GCCTCCCCCCCCCCCTGGTTTGTTCAGTTTATACAGGATAAGTAATCCAG AATCTTGACGATGCTGTGAGCTAATATTTGTTACAAAGGCAAGGTGTTGG GGTTCTACTTTGACGCAGCCGAAATCTTTCCCTCGCCACCGCCCCCGAAT GCAACCTCCTGATTCGCTGCTCTACTTGGCTTCGGCGGTCGGGTGAACTT AAGGTGGATGCACGTCCTTGACCCAGGCATTGGATTCGCCAAGTCGCAAT CACAGAGGTAGGTTTGTTAGGCTTTTTATATTTGCAGGAATTATTCAAGG GCATGGTGGTGGGTGCGCTGCACTGTAAAATCTAAAAATTGTACATACTG TACCCTGCTGTATCCCCCATATATTAGCAGCTGTCAGCTTTCCTCCATTC CTCCGGCTCACCCACGCTGTCGACCGCTTGCCCACCCTGTTGACACAGCT TGAGCAGTCCCGTGAATTGCCATGACCAGGAACATCATGTATATTGTAGT GAGCCAAGCACGCTGAAGAGTTTTTGTTATCAAGACAATGATCTCAAGGT AACTTTCCTTTTTATTCCCCCATTACAGGTTTTTGTGATGTTTCAACCAC CTCGATGGTAAAGACAAGACTCTATCCTCCCGAGGAGGCGTTACCACTGG CCTAACAACTACGACATGCAAAACATGAACCCCCCCCTCACGGTGTCCGT TTGATCTACCCCTCACCCTCCTCAAAACGCTCTGTGGCGGGTTCCGCTGT TGACCATGTCCCGGCGGCCACTCCGTGTGTGACAGCCTGTTGTTACTCCG CAAGCTAGATGTTATCGGGGCGCGCGTTAAGGCCCCACTGCTCGTGGGAC CCAGCCGTAAACGGTTTATAGGAGAGGTGAGAATGACTGGCAATACAAAA GCACAATTTAAAATTCGTGTGTTGTTGCATGCGTAAAAGCGTGTGCGCAT ACGTGCCATGTGTACGCGCGCGCGTGTCACGTTCTTAGTTGTTGCTGCTG TTGCTGTTGCCGCTTTTATTTTTTCCCGAATAACGACCATCATAATCTCC GCGTCAGCCTGTTGCGTTGTGTTATTGCATCGAGGCGATAGTTGGCCGAC ATTTAATATATCAGCGCTGTGAAGGTTTCATCCAGGGGAAAAGGAACGAT AGGAGCATATCCATACACAGCACGCTTGACCAGGCGGATCCTTATCTCAC CCCCCCCCGTCCCCATCAACCCTGCCCCCGTCCTCTGTGAAATCCTACAC GCTCCGCTCACCTGTCCGCTGTCTGTCCTGCAGTAATATTTGAGAATGTT GAACTAACTGAGAACTCCCATGAATTAAAACAATGAAAAAAGATACCGCC AAAAATAATTCTGGTAATAACCCAACATCATTTTGAGATAATAAAAAATT AACTTGATTCATAAACAATAATAGGGATTCGAACCCACGAAAGCTCCAAA TAATTCAAATAATTTTTTGTAAACAGTTTATTATTGTTTTTAAATTGAAA ATGAAAACGGAATGTACTTATACTTAATGACTAAGACTAATAGTGTCATT TAAGTAAATAGTTGTCAAAATTAAAAACATAAGCCTGTATAATAGAAACG GCTGTTTCTAATATAAACAATATAACAATAGCACTTAACGGTATTAAATA AATTTATTTCAGCACTTGACGTTTCATGTGTTAGGTATGTACTGAAAACA CGCCCTCAAGGTTATACACGTGATGTTGGGTACAGTAGGAAATAACTAAG TGTCAGTGAGGTCACATAATGCTGCTATGCATCCCTCCTATTAGGATGGA GCTTGAGGCCATGGATCATACATGTTACTCTTGTCGACTACGGCTTTCTT TTCTCCCCCCTCTCCCTCCTTCGCTCGAGAGGGTCTAACTAACTAACGGT CAATGCACCTAAAACTTGAGTACATCCCTTGAATTTCCTCATCTTGGTAA AGTAGTTGATTCGAGAGTAGTTACACACGTCTCGAAGCTTTGTTTCGCTC GTGTGTATTACCGCCTTCAGTCAGTACGCTGCCCCCGGCCCCCGCGCCCC CCTTCCCCACGGAAAATAGCCTGAATGAACGAGGGCGAATGTAGACAGGA TAGTTGGAACCTTTTTGAGTCACTTTTGGCTACGGAGCAAGGGGCCGTTG GCTATCAAAGATCATCTGTAAAAGAAAAATGCTCCGTCCTTTCAAGAATG CGGGGTAACTGACCCAACAGCTAAGACAGGCGAAACATGCGTCTTCGCAC CCTTTTTTTAGTGTTTAATTCCGCTCCCTGCATTCATTTCTGCCGTCAAA TACGCACAGTTGACAGGTGAAAAAGAAGCCTCTCAGCGAGATTGGGGCAC GGTTGGGGCATGCTGCGCCTCGGCAGAGCGTGGGGCTAAGATCGTTCGGG TGCACAACGTTAGGGTAGTGGTACAAGCTCTAGCTGTTGCAGACGCGATT CGAGGTGCAGCGTCTGAGTGATGAAATCAAGAATAATGGTGATGGTGGTC GTGGTGGTGGTGTTAACGATGACGACGATGATGATGATGATGATGACGAT GGCGACAATGATGGGTGTAGCTTAGATCGCCCGGTTGGCACGGGGCATTT TTTTAAGGTGTGCACGGCACTCGTGTAACGCGGGGGTATTCCAATTGCCC AGCTGGCAATAGCATTTTCTTCTAATCTTGTTGGGGGGCAATAAGCTTTT TTTGTGGAGACCAGTGGCTGGAAGTGTCAAGGGTGTGTAATTGCTTTACG ATATTCAAATCCTCATTTGGGTTGTCTTGGAACACGGACGGTTGGTTATA CAGTACATACCTTTGTCAGGCGAAATGCCTTTTGAGGGTTGAGGCGGATG TAGCGATTTTGTGTTGATTGGTTGATTGCTTGGCTGGTTGGTTGATTGGT GGGGACGGTCGCTACTGCTGGGAATGTGTAGAGTACATGTTTTTTTTGTG TTGGGCGTTACGTCTTCTTTGTAATGTTCATATACTTCCTCTGTGCCACA AGTAAAGTTGCTTGAGTTTACAGAGGCATGTGACCTTCTCCGAGGTTTGT TTCGGTTATTTATAATCC
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Coding sequence (CDS) from alignment at H-paniculata_contig7711:2239..6706-

>mRNA_H-paniculata_contig7711.15732.1 ID=mRNA_H-paniculata_contig7711.15732.1|Name=mRNA_H-paniculata_contig7711.15732.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=948bp|location=Sequence derived from alignment at H-paniculata_contig7711:2239..6706- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTCAGCACCGTCGCGGAACTGGGGGTGCCTTTGACCATGATGCACAT
GCGATGCTCAGCACCGTCGCGGAACTGGGGGTGCCTTTGACCATGATGCA
CATGCGTGGTACCCCTCAGACGATGACGTCATTGACGGACTACGGGGGAG
ACGTAGTGGGCGACGTTTGTGACAAGCTCGAGGGATGTAGCAGGGCTGCT
GAAAGAGCAGGGATACCCAGTGGTACCCCTCAGACGATGACGTCATTGAC
GGACTACGGGGGAGACGTAGTGGGCGACGTTTGTGACAAGCTCGAGGGAT
GTAGCAGGGCTGCTGAAAGAGCAGGGATACCCAGGTGGATGCACGTCCTT
GACCCAGGCATTGGATTCGCCAAGTCGCAATCACAGAGGTGGATGCACGT
CCTTGACCCAGGCATTGGATTCGCCAAGTCGCAATCACAGAGCCTGTTGT
TACTCCGCAAGCTAGATGTTATCGGGGCGCGCGTTAAGGCCCCACTGCTC
GTGGGACCCAGCCGTAAACGGTTTATAGGAGAGCCTGTTGTTACTCCGCA
AGCTAGATGTTATCGGGGCGCGCGTTAAGGCCCCACTGCTCGTGGGACCC
AGCCGTAAACGGTTTATAGGAGAGTTGACAGGTGAAAAAGAAGCCTCTCA
GCGAGATTGGGGCACGGTTGGGGCATGCTGCGCCTCGGCAGAGCGTGGGG
CTAAGATCGTTCGGGTGCACAACGTTAGGGTAGTGGTACAAGCTCTAGCT
GTTGCAGACGCGATTCGAGGTGCAGCGTCTGAGTGATTGACAGGTGAAAA
AGAAGCCTCTCAGCGAGATTGGGGCACGGTTGGGGCATGCTGCGCCTCGG
CAGAGCGTGGGGCTAAGATCGTTCGGGTGCACAACGTTAGGGTAGTGGTA
CAAGCTCTAGCTGTTGCAGACGCGATTCGAGGTGCAGCGTCTGAGTGA
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