mRNA_H-paniculata_contig7657.15651.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7657.15651.1 vs. uniprot
Match: D8LNG6_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG6_ECTSI) HSP 1 Score: 145 bits (366), Expect = 5.280e-33 Identity = 100/272 (36.76%), Postives = 137/272 (50.37%), Query Frame = 2
Query: 875 RVGDNEQLAPYLACAEYKNGGKALGRLQTHLHRRRGHGVRSASHTVEYGACFLATATVAEASEVSNDLEAFGLSSFGAFPSMLKLVPGLLNYDGGIVDLARQEEEVRIYQQQQQRPKGSKTRLTTTHGYTMRHPNVNGLNVELSPGILPEARGVSAAARAEKNRRHPHNNDNRSGPDRDSKTDALRTAEMFTERLKGKLMSHSLQLFDANFWSDASAVEEDGDIVLHPAGPGALRAREWQRAAAAVREADRDGMNGPGEACGWDAVRFHHAG 1690
R E AP+LACA Y +G +A RL+ L VR SH+ ++GACF A+A+ A+A+ + D E FGL +F FPS LKL PGL+++ + EEE R RL+ HG MR PNV GL+VEL+PG L AAR+ + A+ F + G LMS S+ L NFWSD ++ G+ + PAG A+RAR+W++AA+ V E GPG+ C W+ + HHAG
Sbjct: 63 RHSQEETRAPHLACARYGDGHEASSRLKQFLSPE---AVRVVSHSEDHGACFFASASHAQAAAIVEDQEQFGLENFSPFPSPLKLAPGLVDHTESHDEA---EEEARS---------SGLDRLSARHGARMRKPNVEGLSVELTPGTL--------AARSSE-------------------------AKSFINHMLGDLMSASVDLHSTNFWSDPG-MDGAGEHLSSPAG--AVRARDWRKAASVVHELSEAASTGPGDICSWNRIFVHHAG 283
BLAST of mRNA_H-paniculata_contig7657.15651.1 vs. uniprot
Match: A0A6H5K7G6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7G6_9PHAE) HSP 1 Score: 135 bits (341), Expect = 2.980e-32 Identity = 117/346 (33.82%), Postives = 145/346 (41.91%), Query Frame = 2
Query: 653 LASIEATMLTTAGADFAGDQVAYATATNWHEARLLHHHHLHRRQLLEQQPHGESNTDYLRPRSQPNTDFSTTSSRVGDNEQLAPYLACAEYKNGGKALGRLQTHLHRRRGHGVRSASHTVEYGACFLATATVAEASEVSNDLEAFGLSSFGAFPSMLKLVPGLLNYDGGIVDLARQEEEVRIYQQQQQRPKGSKTRLTTTHGYTMRHPNVNGLNVELSPGILPEARGVSAAARAEKNRRHPHNNDNRSGPDRDSKTDALRTAEMFTERLKGKLMSHSLQLFDANFWSDASAVEEDGDIVLHPAGPGALRAREWQRAAAAVREADRDGMNGPGEACGWDAVRFHHAG 1690
L +E + TTA DF G A+ A W+ RL RSQ T AP+L CAEY +G + RL+ L VR SH+ ++GACFLATA+ A+AS + D E FGL SF FPS LKL PGL+++ + EV + P + RL HG TMR NV GLNV+L+P LP AR A E F L G LMS S+ L NFWSD G L G GA+RAR+W +AA+ V E PG+ C WD V AG
Sbjct: 22 LELVENGLATTAKDDFNGHARAFEAAATWNGERLR--------------------------RSQDGT--------------RAPHLCCAEYGHGRETFSRLKQFLSPD---AVRVVSHSEDHGACFLATASHAQASAIMEDQEQFGLESFSPFPSALKLAPGLVDHS--------ESREV------EGEPSSGQDRLGARHGGTMRMSNVEGLNVKLTPDTLP-ARSAGA--------------------------------ESFIIDLLGDLMSASVDLHSTNFWSDPVMA---GGEHLSSHG-GAVRARDWSKAASVVHELSEAAGTSPGDICSWDEVALIQAG 273
BLAST of mRNA_H-paniculata_contig7657.15651.1 vs. uniprot
Match: A0A2I6U1R2_SACJA (Subtilisin (Fragment) n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1R2_SACJA) HSP 1 Score: 139 bits (349), Expect = 6.850e-31 Identity = 118/346 (34.10%), Postives = 151/346 (43.64%), Query Frame = 2
Query: 653 LASIEATMLTTAGADFAGDQVAYATATNWHEARLLHHHHLHRRQLLEQQPHGESNTDYLRPRSQPNTDFSTTSSRVGDNEQLAPYLACAEYKNGGKALGRLQTHLHRRRGHGVRSASHTVEYGACFLATATVAEASEVSNDLEAFGLSSFGAFPSMLKLVPGLLNYDGGIVDLARQEEEVRIYQQQQQRPKGSKTRLTTTHGYTMRHPNVNGLNVELSPGILPEARGVSAAARAEKNRRHPHNNDNRSGPDRDSKTDALRTAEMFTERLKGKLMSHSLQLFDANFWSDASAVEEDGDIVLHPAGPGALRAREWQRAAAAVREADRDGMNGPGEACGWDAVRFHHAG 1690
L+ +E ++LTTA F G A+ TA W + LR S+ DN + AP+L C EY GGK L RLQ L VR +H+ +GACF TA+ AEA +S D +GL+S FPS LK+ PG+L + G +D A Q S RLTTTHG+ MR NV GLN+ELSPG LP P+ A MF L LMS S+ L N WSD A +G+ + PAG A+R REW AA V + G PG+ C WD++ H+AG
Sbjct: 34 LSVVEGSLLTTAQDSFDGHAKAFETAAQW-------------------------TGEILR-------------SKEEDNAR-APHLVCTEYNRGGKTLPRLQELLSPG---AVRPVAHSSTHGACFFVTASHAEARAMS-DSPYYGLTSISPFPSALKVAPGVLEH-GVSLDQASQ----------------SPGRLTTTHGHLMRKGNVEGLNMELSPGTLPAH-----------------------SPE----------AGMFIAELLDDLMSDSIDLHGGNVWSDPVAA--NGEHLTTPAG--AVRKREWSMAATLVHQLAVAGRTSPGDICSWDSISMHYAG 282
BLAST of mRNA_H-paniculata_contig7657.15651.1 vs. uniprot
Match: A0A2I6U1S5_SACJA (Subtilisin n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1S5_SACJA) HSP 1 Score: 138 bits (347), Expect = 1.310e-30 Identity = 117/346 (33.82%), Postives = 147/346 (42.49%), Query Frame = 2
Query: 653 LASIEATMLTTAGADFAGDQVAYATATNWHEARLLHHHHLHRRQLLEQQPHGESNTDYLRPRSQPNTDFSTTSSRVGDNEQLAPYLACAEYKNGGKALGRLQTHLHRRRGHGVRSASHTVEYGACFLATATVAEASEVSNDLEAFGLSSFGAFPSMLKLVPGLLNYDGGIVDLARQEEEVRIYQQQQQRPKGSKTRLTTTHGYTMRHPNVNGLNVELSPGILPEARGVSAAARAEKNRRHPHNNDNRSGPDRDSKTDALRTAEMFTERLKGKLMSHSLQLFDANFWSDASAVEEDGDIVLHPAGPGALRAREWQRAAAAVREADRDGMNGPGEACGWDAVRFHHAG 1690
L +E ++LTTA F G + TA W D +R S+ DN + AP+L C EY GG+ L RLQ L VRS +H+ +GACF TA+ AEA +S D +GL+S FPS LK+ PG+L + G D A Q S RL TTHG+ MR NV GLN+ELSPG LP A A MF L LMS S+ L N WSD A +G+ + PAG A+R REW AA V + G PG+ C WD++ HHAG
Sbjct: 34 LGVVEGSLLTTAHESFDGHAKGFETAAQW-------------------------TGDIIR-------------SKEEDNAR-APHLVCTEYNRGGETLSRLQELLSPE---AVRSVAHSSTHGACFFVTASHAEARAMS-DNPYYGLTSISPFPSALKVAPGVLEH-GVSRDQASQ----------------SPGRLATTHGHLMRKGNVEGLNLELSPGTLP-AHSPQAG--------------------------------MFIAELLDDLMSDSIDLHGGNVWSDPVAA--NGEHLTTPAG--AVRKREWSMAATLVHQLAVAGRTSPGDICSWDSISIHHAG 282
BLAST of mRNA_H-paniculata_contig7657.15651.1 vs. uniprot
Match: A0A6H5K229_9PHAE (Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K229_9PHAE) HSP 1 Score: 135 bits (341), Expect = 7.860e-30 Identity = 117/346 (33.82%), Postives = 145/346 (41.91%), Query Frame = 2
Query: 653 LASIEATMLTTAGADFAGDQVAYATATNWHEARLLHHHHLHRRQLLEQQPHGESNTDYLRPRSQPNTDFSTTSSRVGDNEQLAPYLACAEYKNGGKALGRLQTHLHRRRGHGVRSASHTVEYGACFLATATVAEASEVSNDLEAFGLSSFGAFPSMLKLVPGLLNYDGGIVDLARQEEEVRIYQQQQQRPKGSKTRLTTTHGYTMRHPNVNGLNVELSPGILPEARGVSAAARAEKNRRHPHNNDNRSGPDRDSKTDALRTAEMFTERLKGKLMSHSLQLFDANFWSDASAVEEDGDIVLHPAGPGALRAREWQRAAAAVREADRDGMNGPGEACGWDAVRFHHAG 1690
L +E + TTA DF G A+ A W+ RL RSQ T AP+L CAEY +G + RL+ L VR SH+ ++GACFLATA+ A+AS + D E FGL SF FPS LKL PGL+++ + EV + P + RL HG TMR NV GLNV+L+P LP AR A E F L G LMS S+ L NFWSD G L G GA+RAR+W +AA+ V E PG+ C WD V AG
Sbjct: 34 LELVENGLATTAKDDFNGHARAFEAAATWNGERLR--------------------------RSQDGT--------------RAPHLCCAEYGHGRETFSRLKQFLSPD---AVRVVSHSEDHGACFLATASHAQASAIMEDQEQFGLESFSPFPSALKLAPGLVDHS--------ESREV------EGEPSSGQDRLGARHGGTMRMSNVEGLNVKLTPDTLP-ARSAGA--------------------------------ESFIIDLLGDLMSASVDLHSTNFWSDPVMA---GGEHLSSHG-GAVRARDWSKAASVVHELSEAAGTSPGDICSWDEVALIQAG 285
BLAST of mRNA_H-paniculata_contig7657.15651.1 vs. uniprot
Match: A0A6H5LLC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLC6_9PHAE) HSP 1 Score: 123 bits (308), Expect = 1.120e-27 Identity = 111/346 (32.08%), Postives = 149/346 (43.06%), Query Frame = 2
Query: 653 LASIEATMLTTAGADFAGDQVAYATATNWHEARLLHHHHLHRRQLLEQQPHGESNTDYLRPRSQPNTDFSTTSSRVGDNE-QLAPYLACAEYKNGGKALGRLQTHLHRRRGHGVRSASHTVEYGACFLATATVAEASEVSNDLEAFGLSSFGAFPSMLKLVPGLLNYDGGIVDLARQEEEVRIYQQQQQRPKGSKTRLTTTHGYTMRHPNVNGLNVELSPGILPEARGVSAAARAEKNRRHPHNNDNRSGPDRDSKTDALRTAEMFTERLKGKLMSHSLQLFDANFWSDASAVEEDGDIVLHPAGPGALRAREWQRAAAAVREADRDGMNGPGEACGWDAVRFHHA 1687
L E T+LTTAG DF + A+A A+ W + GD + + APYL+C ++ G A +L+ L R VR S T +GACF+ TA+ AEA+++S+ + L++FGAFP+ LK+ PGLL D G D + + S RL+TTHG M+ + +GL VELSPG LP G G ++K D F + L L S SL L WSD V + GD + AG ALR REW RAA V E + P + CGW+ V HHA
Sbjct: 32 LGFFEQTLLTTAGLDF-DSEAAFAFASAW---------------------------------------------QAGDRQGRSAPYLSCVKHGEGRHAYRKLEGFLGAR---AVRPVSSTATHGACFMVTASPAEATQLSSWED---LTTFGAFPAALKIAPGLL--DHGSCDGSASARDATTTTTSD----CSVERLSTTHGALMQADSAHGLMVELSPGTLPSHGG---------------------GDGNEAKADE------FIQELLNSLSSPSLDLHAMTCWSDL--VMKGGDHLFSAAG--ALRGREWSRAATLVNERSESELETPSQVCGWEQVVVHHA 288
BLAST of mRNA_H-paniculata_contig7657.15651.1 vs. uniprot
Match: A0A6H5JQT4_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQT4_9PHAE) HSP 1 Score: 129 bits (324), Expect = 1.140e-27 Identity = 95/274 (34.67%), Postives = 127/274 (46.35%), Query Frame = 2
Query: 875 RVGDNEQLAPYLACAEYKNGGKALGRLQTHLHRRRGHGVRSASHTVEYGACFLATATVAEASEVSNDLEAFGLSSFGAFPSMLKLVPGLLNYDGGIVDLARQEEEVRIYQQQQQRPKGSKT---RLTTTHGYTMRHPNVNGLNVELSPGILPEARGVSAAARAEKNRRHPHNNDNRSGPDRDSKTDALRTAEMFTERLKGKLMSHSLQLFDANFWSDASAVEEDGDIVLHPAGPGALRAREWQRAAAAVREADRDGMNGPGEACGWDAVRFHHA 1687
R +E AP+L CAEY +G + RL+ L VR SH+ + GACF A+A+ A+AS + D E FGL SF FPS LKL PGL+++ Q+ + K + T RL+ HG MR NV GL++EL+PG L +R V A E F G LM S+ L NFWSD + G+ + P G A+RAR+W +AA+ V E PG+ C W+ V HHA
Sbjct: 58 RHRQDETRAPHLCCAEYGHGRETFSRLKQFLSPE---AVRVVSHSEDLGACFFASASHAQASAIIEDQEQFGLESFSPFPSALKLAPGLVDHS-----------------QRHDKDKETTTGLDRLSARHGARMRMSNVEGLSIELTPGTLA-SRSVEA--------------------------------EAFISDTLGDLMLASVDLHSTNFWSDQNM--GGGEQLSFPGG--AVRARDWSKAASVVHELSEAAGTSPGDICSWNRVSVHHA 274
BLAST of mRNA_H-paniculata_contig7657.15651.1 vs. uniprot
Match: D8LQI1_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI1_ECTSI) HSP 1 Score: 121 bits (304), Expect = 3.450e-25 Identity = 112/351 (31.91%), Postives = 149/351 (42.45%), Query Frame = 2
Query: 653 LASIEATMLTTAGADFAGDQVAYATATNWHEARLLHHHHLHRRQLLEQQPHGESNTDYLRPRSQPNTDFSTTSSRVGDNE-QLAPYLACAEYKNGGKALGRLQTHLHRRRGHGVRSASHTVEYGACFLATATVAEASEVSNDLEAFGLSSFGAFPSMLKLVPGLLNY---DGGIV--DLARQEEEVRIYQQQQQRPKGSKTRLTTTHGYTMRHPNVNGLNVELSPGILPEARGVSAAARAEKNRRHPHNNDNRSGPDRDSKTDALRTAEMFTERLKGKLMSHSLQLFDANFWSDASAVEEDGDIVLHPAGPGALRAREWQRAAAAVREADRDGMNGPGEACGWDAVRFHHA 1687
L E T+LTTAGADF + A+A A+ W + GD + + +PYL+C E+ G A +L+ L R V+ S T +GACF+ TA+ AEA+++S+ E F ++FGAFP+ LK+ PGLL++ DG D A + S RL+TTHG +M+ + +GL VELSPG LP G A A F + L L S SL L WSD V + GD + AG ALR REW RAA V E P + CGW+ V HHA
Sbjct: 27 LGFFEQTLLTTAGADF-DSEAAFAFASAW---------------------------------------------QAGDRQGRSSPYLSCVEHGEGRHAYRKLEGFLGAR---AVKPVSSTATHGACFMVTASPAEAAQLSS-WEDF--TTFGAFPAALKIAPGLLDHGSCDGPAAARDAATTTSDC------------SAGRLSTTHGASMQVDSAHGLMVELSPGTLPSHSGGDAKAHE------------------------------FIQELLKSLSSPSLDLHAITCWSDL--VMKGGDHLFSAAG--ALRGREWSRAATLVNERSESEQETPSQVCGWEQVVVHHA 279
BLAST of mRNA_H-paniculata_contig7657.15651.1 vs. uniprot
Match: A0A6H5JKA8_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKA8_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 1.370e-14 Identity = 107/409 (26.16%), Postives = 140/409 (34.23%), Query Frame = 2
Query: 644 HTPLASIEATMLTTAGADFAGDQVAYATATNWHEARLLHHHHLHRRQLLEQQPHGESNTDYLRPRSQPNTDFSTTSSRVGDNEQLAPYLACAEYKNGGKALGRLQTHLHRRRGHGVRSASHTVEYGACFLATATVAEASEVSNDLEAFGLSSFGAFPSMLKLVPGLLNY-----DGGIVDLARQEEEVRIYQQQQQRPKGSKTRLTTTHGYTMRHPN----------------------------------------------VNGLNVELSPGILPEA--RGVSAAARAEKNRRHPHNNDNRSGPDRDSKTDALRTAEMFTERLKGKLMSHSLQLFDANFWS--------DASAVEEDGDIVLHPAGPGALRAREWQRAAAAVRE-ADRDGMNGPGEACGWDAVRFHH 1684
H PL+ I +LTTAG F Q + A WHEARL D+ + APYLACA + G +H+ G R + E+G C +ATAT +A + + F SS+ AFPS LKL PGLL++ DGG G RL THG +R P V GL VEL+PG+L RG S ++ T+ + +LMS SL + D +FWS D +A E GD GPG + AREW RAA +R +G G+ C WD + H
Sbjct: 29 HPPLSVIRGALLTTAGVTFR-HQGEFKAAVEWHEARL-------------------------------------------DDARPAPYLACASPDSDRGGSGATLSHVLGAGAIGGRVVVSSAEHGVCVVATATPGQAESIFQGQQVF--SSWAAFPSALKLAPGLLDHPHDDRDGG----------------------GGDGRLRMTHGERLRRPKDRKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNIGGGPSGVTGLTVELAPGVLAATNRRGSSGGG-------------------------WYASSGELTDEWREELMSQSLDVHDKSFWSSGWSAKLPDEAAAEGAGDSS--GGGPGEVLAREWTRAADVLRGLGGTEGGPTIGDVCSWDGLVVVH 342
BLAST of mRNA_H-paniculata_contig7657.15651.1 vs. uniprot
Match: D8LSW0_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW0_ECTSI) HSP 1 Score: 82.8 bits (203), Expect = 8.500e-13 Identity = 91/344 (26.45%), Postives = 127/344 (36.92%), Query Frame = 2
Query: 653 LASIEATMLTTAGADFAGDQVAYATATNWHEARLLHHHHLHRRQLLEQQPHGESNTDYLRPRSQPNTDFSTTSSRVGDNEQLAPYLACAEYKNGGKALGRLQTHLHRRRGHGVRSASHTVEYGACFLATATVAEASEVSNDLEAFGLSSFGAFPSMLKLVPGLLNYDGGIVDLARQEEEVRIYQQQQQRPKGSKTRLTTTHGYTMRHPNVNGLNVELSPGILPEARGVSAAARAEKNRRHPHNNDNRSGPDRDSKTDALRTAEMFTERLKGKLMSHSLQLFDANFWSDASAVEEDGDIVLHPAGPGALRAREWQRAAAAVREADRDGMNGPGEACGWDAVRFHH 1684
L I+A ++A DFA Q AY+ A++W+ RL + E +T APY+ACA+YK G AL L+T + H V S+T G CF+ TA + A+ V E F L S LKL LL++ ++ + L +T+G M NV+GL+V LSPG+L S A E F L S S+ + A+FWSD+ A + D+ R REW RAAA V GE CG+ ++ H
Sbjct: 14 LGKIQAITASSAFDDFARSQSAYSAASSWYNDRLSY-------------DAAEGST--------------------------APYVACADYKQGRHALTSLETAFTKSAVHRV---SNTEADGTCFIVTALPSSATAVIRAPEDFDLLSAAPLLPSLKLATSLLDHGPDTSPRLGAADDFDL--------SDHSAPLRSTYGEGMTLDNVHGLSVRLSPGVLTAGGRESFA-------------------------------EAFLRDWHADLTSESVNMRRASFWSDSDADRSEYDVT---------RVREWSRAAAVVDGLASKSARTVGEICGFGKLKLRH 267 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7657.15651.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7657.15651.1 >prot_H-paniculata_contig7657.15651.1 ID=prot_H-paniculata_contig7657.15651.1|Name=mRNA_H-paniculata_contig7657.15651.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=447bp MRRRIGRSTFGTTSDLSPNPNMTHEPKEQQSHPRRLHATPSSPPTMVATAback to top mRNA from alignment at H-paniculata_contig7657:4717..6406+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7657.15651.1 ID=mRNA_H-paniculata_contig7657.15651.1|Name=mRNA_H-paniculata_contig7657.15651.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1690bp|location=Sequence derived from alignment at H-paniculata_contig7657:4717..6406+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7657:4717..6406+ >mRNA_H-paniculata_contig7657.15651.1 ID=mRNA_H-paniculata_contig7657.15651.1|Name=mRNA_H-paniculata_contig7657.15651.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2682bp|location=Sequence derived from alignment at H-paniculata_contig7657:4717..6406+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |