mRNA_H-paniculata_contig765.15647.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig765.15647.1
Unique NamemRNA_H-paniculata_contig765.15647.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig765.15647.1 vs. uniprot
Match: D7FTM6_ECTSI (Putative fusion of putative sugar/xylulosekinase and ribulose-phosphate epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTM6_ECTSI)

HSP 1 Score: 299 bits (766), Expect = 3.200e-93
Identity = 162/246 (65.85%), Postives = 184/246 (74.80%), Query Frame = 2 
Query:   41 VCGRVNASILAADMTALSSEVSKVLKAGADWIHVDVVDNHFAKVLTFGPPIVASLRRKHRSAFLDVHLAVERPSEYVDVLEKAGASQVLFHPESFSATTADEEMEKLALQIRSTGMRAGVALRPETPVSAIAFLLRPKQLLQCVDILAVQPGFGGQKFDAGVLRKVKELRSMCPGLDIQVDGGVNVDTASACVAAGANILTSGSFIFTDSDGESYAGAVQE--------------LRRTLSTKWKL 736
            V G VNASILAADM  LS EV +V+ AGADWIHVDVVDN FAKVLTFGPP+VASLRR+H S FLDVHLAVE P EYVD L+ AG SQVLFHPE+     +D +   LA++I   GMRAGVALRPETPVSA+  LL P++L+QCVD+LAVQPGFGGQ FD+ VL KV+ELRS+CP LDIQVDGGVN  TA ACVAAGAN+LTSGSFIF ++ G   A  V E              LR  LS KW+L
Sbjct:  227 VVGLVNASILAADMADLSGEVERVMAAGADWIHVDVVDNVFAKVLTFGPPVVASLRRRHPSVFLDVHLAVENPHEYVDALKDAGTSQVLFHPEAV-VEGSDMDAASLAVRISEAGMRAGVALRPETPVSAVLPLLEPRRLVQCVDVLAVQPGFGGQAFDSTVLAKVEELRSICPELDIQVDGGVNAATAQACVAAGANVLTSGSFIFGNNTGAVAASHVSEAAXXXXXXXXXIAELRGALSAKWRL 471
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BLAST of mRNA_H-paniculata_contig765.15647.1 vs. uniprot
Match: A0A6H5K691_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K691_9PHAE)

HSP 1 Score: 297 bits (761), Expect = 3.700e-89
Identity = 159/239 (66.53%), Postives = 183/239 (76.57%), Query Frame = 2 
Query:   41 VCGRVNASILAADMTALSSEVSKVLKAGADWIHVDVVDNHFAKVLTFGPPIVASLRRKHRSAFLDVHLAVERPSEYVDVLEKAGASQVLFHPESFSATTADEEMEKLALQIRSTGMRAGVALRPETPVSAIAFLLRPKQLLQCVDILAVQPGFGGQKFDAGVLRKVKELRSMCPGLDIQVDGGVNVDTASACVAAGANILTSGSFIFTDSDGE---------SYAGAVQELRRTLSTKW 730
            V G VNASILAADM  LS EV +V+ AGADWIHVDVVDN FAKVLTFGPP+VASLRR+H S FLDVHLAVE P EYVD L+ AG SQVLFHPE+  A   D +   LA++I   GMRAGVALRPETPVSA+  LL P++L++CVD+LAVQPGFGGQ FD+ VL KV+ELRS+CP LDIQVDGGV+  TA ACVAAGAN+LTSGSFIF  + G          + A ++ ELR  LS KW
Sbjct:  536 VVGLVNASILAADMADLSGEVERVMAAGADWIHVDVVDNVFAKVLTFGPPVVASLRRRHPSVFLDVHLAVENPHEYVDALKDAGTSQVLFHPEAV-AEGGDMDAASLAVRISEAGMRAGVALRPETPVSAVLPLLEPRRLVKCVDVLAVQPGFGGQAFDSTVLTKVEELRSICPELDIQVDGGVSATTAQACVAAGANVLTSGSFIFGSNTGSMASSHVSEAAAAVSIAELRGALSAKW 773
[Close]
BLAST of mRNA_H-paniculata_contig765.15647.1 vs. uniprot
Match: A0A835YTS4_9STRA (Glycerol kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTS4_9STRA)

HSP 1 Score: 251 bits (642), Expect = 7.150e-72
Identity = 139/242 (57.44%), Postives = 165/242 (68.18%), Query Frame = 2 
Query:   38 EVCGRVNASILAADMTALSSEVSKVLKAGADWIHVDVVDNHFAKVLTFGPPIVASLRRKHRSAFLDVHLAVERPSEYVDVLEKAGASQVLFHPESF--------SATTADEEMEKLALQIRSTGMRAGVALRPETPVSAIAFLLRPKQL-LQCVDILAVQPGFGGQKFDAGVLRKVKELRSMCPGLDIQVDGGVNVDTASACVAAGANILTSGSFIFTDSDGESYAGAVQELRRTLSTKWKL 736
            +V G V+ASILAAD      E  + L+AGA W HVD+VD HFAK+LTFGPP+V SLRR+    F+DVHLAVE P EY+  L  AGASQVLFH E+         S T   + +  LA +IR+ GMRAGV L PETP + IA LL P  + L CVD LAVQPGFGGQ FD  VL+KV ELR MCP LDIQVDGGVN+ TA+ACV AGAN+LT+G+ IF     E  A AV  LR+ L+ +W L
Sbjct:  550 DVRGIVDASILAADFADFGGEAERALEAGAQWCHVDIVDGHFAKILTFGPPVVRSLRRRLPQLFIDVHLAVENPGEYIAQLAAAGASQVLFHVEACRSADAGHPSPTYCIDTVAALAREIRAAGMRAGVVLNPETPAAVIAPLLSPGAVQLDCVDCLAVQPGFGGQPFDKSVLQKVAELREMCPTLDIQVDGGVNLKTAAACVQAGANVLTAGTCIF---GAEDCAAAVGALRQALAARWTL 788
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BLAST of mRNA_H-paniculata_contig765.15647.1 vs. uniprot
Match: A0A7S1Z3S0_TRICV (Ribulose-phosphate 3-epimerase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z3S0_TRICV)

HSP 1 Score: 184 bits (466), Expect = 1.570e-51
Identity = 96/221 (43.44%), Postives = 144/221 (65.16%), Query Frame = 2 
Query:   53 VNASILAADMTALSSEVSKVLKAGADWIHVDVVDNHFAKVLTFGPPIVASLRRKHRSAFLDVHLAVERPSEYVDVLEKAGASQVLFHPESFSATTADEEMEKLALQIRSTGMRAGVALRPETPVSAIAFLLRPKQLLQCVDILAVQPGFGGQKFDAGVLRKVKELRSMCPGLDIQVDGGVNVDTASACVAAGANILTSGSFIFTDSDGESYAGAVQELRRT 715
            ++ S+L+ D++AL+ + S+++  GADW+H+D++D HF   ++FGPP++ASLR+ ++ A+LD HL V  P ++V  + KAGAS   FH ES     AD  ++ L   IR +GM  GV+++P+TPVS IA LL    L   V I+ V+PGF GQKF    + KVKE+R + PG+D+QVDGG++  T  A   AGAN++ + S IF   D     G +Q+LR +
Sbjct:   24 ISPSLLSCDLSALARDASEMIDLGADWLHMDIMDGHFVPNISFGPPVIASLRKANKEAYLDCHLMVSDPMKWVGPMSKAGASLFTFHIES--DMPADGGVDALIASIRESGMNVGVSIKPKTPVSDIAPLLDKVDL---VLIMTVEPGFSGQKFMGDCMPKVKEVRDLAPGMDVQVDGGLSPATVDAATEAGANVIVAASAIFGSDDR---GGVIQKLRES 236
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BLAST of mRNA_H-paniculata_contig765.15647.1 vs. uniprot
Match: A0A7S4LMD7_9EUGL (Ribulose-phosphate 3-epimerase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LMD7_9EUGL)

HSP 1 Score: 183 bits (464), Expect = 2.440e-51
Identity = 94/206 (45.63%), Postives = 135/206 (65.53%), Query Frame = 2 
Query:   44 CGRVNASILAADMTALSSEVSKVLKAGADWIHVDVVDNHFAKVLTFGPPIVASLRRKHRSAFLDVHLAVERPSEYVDVLEKAGASQVLFHPESFSATTADEEMEKLALQIRSTGMRAGVALRPETPVSAIAFLLRPKQLLQCVDILAVQPGFGGQKFDAGVLRKVKELRSMCPGLDIQVDGGVNVDTASACVAAGANILTSGSFIF 661
            C ++  S+LA D+  ++SE  +VL AGAD++H+DV+D HF   +++GPP++ SLR+  + AF D HL V +P ++VD ++ AG  Q +FHPE      A EE EKL  QIR+ GM+ G AL+P TPV+  A L+     +  V I+ V+PGFGGQ F   +L KV+ELR+  P LDI+VDGG+   T  A   AGAN++ +GS +F
Sbjct:   14 CAKIGPSLLACDLANMASESQRVLDAGADYLHLDVMDGHFVPNISWGPPVIKSLRKHIKEAFFDCHLMVSKPEQWVDAIKDAGGDQFIFHPE------ATEEPEKLIQQIRAAGMKVGFALKPRTPVADWAHLVGQ---VDVVLIMTVEPGFGGQSFMEDMLPKVQELRAAYPQLDIEVDGGLGPKTIDAAAKAGANMIVAGSSVF 210
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BLAST of mRNA_H-paniculata_contig765.15647.1 vs. uniprot
Match: A0A6I9URE9_SESIN (Ribulose-phosphate 3-epimerase n=2 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9URE9_SESIN)

HSP 1 Score: 182 bits (461), Expect = 4.700e-51
Identity = 98/224 (43.75%), Postives = 143/224 (63.84%), Query Frame = 2 
Query:   50 RVNASILAADMTALSSEVSKVLKAGADWIHVDVVDNHFAKVLTFGPPIVASLRRKHRSAFLDVHLAVERPSEYVDVLEKAGASQVLFHPESFSATTADEEMEKLALQIRSTGMRAGVALRPETPVSAIAFLLRPKQLLQCVDILAVQPGFGGQKFDAGVLRKVKELRSMCPGLDIQVDGGVNVDTASACVAAGANILTSGSFIFTDSDGESY-AGAVQELRRTL 718
            ++  S+L++D   L++E  ++L+ GADW+H+D++D HF   LT G P++ SLR KH  A+LD HL V  P +YV+ L KAGAS   FH E+     A E  ++L  +I+S GMR GVAL+PETP+  +  LL  K  ++ V ++ VQPGFGGQKF   ++ KV+ LR   P LDI+VDGG+   T     +AGAN + +GS +F    G SY A  + +LR+++
Sbjct:    5 KIAPSMLSSDFANLAAEADRMLRYGADWLHMDIMDGHFVPNLTIGAPVIESLR-KHTDAYLDCHLMVTNPIDYVEPLGKAGASGFTFHVEA-----AKENWQELIHRIKSKGMRPGVALKPETPIEEVYSLLEAKDPVEMVLVMTVQPGFGGQKFMPEMMDKVRSLRKKYPSLDIEVDGGLGPSTVDLASSAGANCIVAGSSVF----GASYPAQVISQLRKSV 218
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BLAST of mRNA_H-paniculata_contig765.15647.1 vs. uniprot
Match: A0A0G4IHX4_PLABS (Ribulose-phosphate 3-epimerase n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IHX4_PLABS)

HSP 1 Score: 180 bits (456), Expect = 2.890e-50
Identity = 95/215 (44.19%), Postives = 136/215 (63.26%), Query Frame = 2 
Query:   62 SILAADMTALSSEVSKVLKAGADWIHVDVVDNHFAKVLTFGPPIVASLRRKHRSAFLDVHLAVERPSEYVDVLEKAGASQVLFHPESFSATTADEEMEKLALQIRSTGMRAGVALRPETPVSAIAFLL-RPKQLLQCVDILAVQPGFGGQKFDAGVLRKVKELRSMCPGLDIQVDGGVNVDTASACVAAGANILTSGSFIFTDSDGESYAGAVQE 703
            SILA D   L+ E+ +++ AGADWIHVD++D HF   LT GPP+VA LR+ + +AFLD H  V  P  ++  L+ AGASQ+ FHPESFS     +E     + I   GMR G+A++P+TPV  +  LL R    +  + ++ V+PGFGGQKF   ++ KV+ LRS  P +++QVDGG+N  T     AAGAN + +GS IF   D ++   A+++
Sbjct:   13 SILAGDFAHLAGEIDRMIAAGADWIHVDIMDGHFVDNLTMGPPVVACLRKHNANAFLDCHCMVSHPMNWIKPLQAAGASQITFHPESFSKV---DEAGPAIVAITGAGMRVGIAIKPKTPVDTLFQLLDRHIASITTLLVMTVEPGFGGQKFIPEMMDKVRTLRSRYPTVNVQVDGGLNEATVHDAAAAGANCIVAGSAIFGSPDPKATIRAMRD 224
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BLAST of mRNA_H-paniculata_contig765.15647.1 vs. uniprot
Match: UPI001E1D2DD7 (ribulose-phosphate 3-epimerase, cytoplasmic isoform-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2DD7)

HSP 1 Score: 180 bits (456), Expect = 3.460e-50
Identity = 108/231 (46.75%), Postives = 140/231 (60.61%), Query Frame = 2 
Query:   41 VCGR---VNASILAADMTALSSEVSKVLKAGADWIHVDVVDNHFAKVLTFGPPIVASLRRKHRSAFLDVHLAVERPSEYVDVLEKAGASQVLFHPESFSATTADEEMEKLALQIRSTGMRAGVALRPETPVSAIAFLLRPKQLLQCVDILAVQPGFGGQKFDAGVLRKVKELRSMCPGLDIQVDGGVNVDTASACVAAGANILTSGSFIFTDSDGESYAGAVQ---ELRRT 715
            VCG    V  SILA+D   L+ E + + + GADW+HVDV+D HF   LT GPPIVA+LR KH S FLDVHL V  P  +VD L +AGA+ V FH E F++         LA +IR+ GMRAG+ALRP TP+SA   L+    +   +  + V+PGFGGQKF   V+ KV   RS  P LDIQVDGG++  T      AGAN++ +G+ IF   D  +    ++   E RRT
Sbjct:   10 VCGPNAVVAPSILASDFARLAEEAANMKRCGADWLHVDVMDGHFVPNLTIGPPIVAALR-KHTSMFLDVHLMVTDPDAWVDDLARAGANAVTFHIEKFTSAAT------LAKRIRAAGMRAGLALRPCTPLSAAVTLIDEGHIDMLLT-MTVEPGFGGQKFTESVMAKVSAARSAYPTLDIQVDGGLSPSTIETAAIAGANVIVAGTAIFGSEDPRAVIADLRWAVERRRT 232
[Close]
BLAST of mRNA_H-paniculata_contig765.15647.1 vs. uniprot
Match: A0A7S0X8C9_9CHLO (Ribulose-phosphate 3-epimerase (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0X8C9_9CHLO)

HSP 1 Score: 183 bits (464), Expect = 9.510e-50
Identity = 108/219 (49.32%), Postives = 133/219 (60.73%), Query Frame = 2 
Query:   50 RVNASILAADMTALSSEVSKVLKAGADWIHVDVVDNHFAKVLTFGPPIVASLRRKHRSAFLDVHLAVERPSEYVDVLEKAGASQVLFHPESFSATTADEEMEKLALQIRSTGMRAGVALRPETPVSAIAFLLRPK-QLLQCVDILAVQPGFGGQKFDAGVLRKVKELRSMCPGLDIQVDGGVNVDTASACVAAGANILTSGSFIFTDSDGESYAGAVQE 703
            R+  S+LAAD   L+ EVS++L  GADW+HVD++D HF   LT GPP+V  LR +   AFLD HL+   P+  VD L KA AS V FH E+            LA +IRS GMRAGVAL+P TP   +  LL      +  V  L V+PGFGGQ F   VL KV  LR   PGLDIQVDGGVN  TA+A  AAGAN+L +GS +F   D  S   A+++
Sbjct:  130 RICPSLLAADQGNLAGEVSRMLAEGADWLHVDIMDGHFVPNLTIGPPVVEHLRSQAPEAFLDCHLSCSNPAGLVDGLSKAKASSVTFHTEALGNDVV--AAAALAARIRSLGMRAGVALKPGTPEEIVFPLLDASPSAVDMVLCLTVEPGFGGQSFMHSVLPKVTALRRRYPGLDIQVDGGVNPLTAAAAAAAGANVLVAGSAVFGAQDPASVIAALRD 346
[Close]
BLAST of mRNA_H-paniculata_contig765.15647.1 vs. uniprot
Match: A0A2U1L8I1_ARTAN (Ribulose-phosphate 3-epimerase n=2 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1L8I1_ARTAN)

HSP 1 Score: 177 bits (450), Expect = 6.930e-49
Identity = 98/229 (42.79%), Postives = 135/229 (58.95%), Query Frame = 2 
Query:   41 VCGRVNASILAADMTALSSEVSKVLKAGADWIHVDVVDNHFAKVLTFGPPIVASLRRKHRSAFLDVHLAVERPSEYVDVLEKAGASQVLFHPESFSATTADEEMEKLALQIRSTGMRAGVALRPETPVSAIAFLLRPKQLLQCVDILAVQPGFGGQKFDAGVLRKVKELRSMCPGLDIQVDGGVNVDTASACVAAGANILTSGSFIFTDSDGESYAGAVQELRRTLSTK 727
            V  ++  S+L++D   L+SE  +++  GADW+H+D++D HF   LT G P++ SLR KH  A+LD HL V  P +YVD   KAGAS   FH E      + +  ++L  QI+S GMR GVAL+P TPV  +  LL  +  ++ V ++ V+PGFGGQKF    + KV+ LR   P LDI+VDGG+   T     AAGAN + +GS +F    G    G V  L RT   K
Sbjct:   47 VSAKIAPSMLSSDFANLASEAQRMVNLGADWLHMDIMDGHFVPNLTIGAPVIESLR-KHTKAYLDCHLMVTNPLDYVDAFGKAGASGFTFHVE-----VSKDNWQELVKQIKSKGMRPGVALKPGTPVEEVYPLLEGENCVEMVLVMTVEPGFGGQKFMPDTMSKVRTLREKYPNLDIEVDGGLGPSTIETAAAAGANCIVAGSSVF----GAPEPGQVISLLRTSVNK 265
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig765.15647.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTM6_ECTSI3.200e-9365.85Putative fusion of putative sugar/xylulosekinase a... [more]
A0A6H5K691_9PHAE3.700e-8966.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YTS4_9STRA7.150e-7257.44Glycerol kinase n=1 Tax=Tribonema minus TaxID=3033... [more]
A0A7S1Z3S0_TRICV1.570e-5143.44Ribulose-phosphate 3-epimerase n=1 Tax=Trieres chi... [more]
A0A7S4LMD7_9EUGL2.440e-5145.63Ribulose-phosphate 3-epimerase n=1 Tax=Eutreptiell... [more]
A0A6I9URE9_SESIN4.700e-5143.75Ribulose-phosphate 3-epimerase n=2 Tax=Sesamum ind... [more]
A0A0G4IHX4_PLABS2.890e-5044.19Ribulose-phosphate 3-epimerase n=1 Tax=Plasmodioph... [more]
UPI001E1D2DD73.460e-5046.75ribulose-phosphate 3-epimerase, cytoplasmic isofor... [more]
A0A7S0X8C9_9CHLO9.510e-5049.32Ribulose-phosphate 3-epimerase (Fragment) n=1 Tax=... [more]
A0A2U1L8I1_ARTAN6.930e-4942.79Ribulose-phosphate 3-epimerase n=2 Tax=Artemisia a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig765contigH-paniculata_contig765:26060..31284 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score285.0
Seed ortholog evalue2.9e-74
Seed eggNOG ortholog2880.D7FTM6
Preferred nameXK-RPE
KEGG rclassRC00540
KEGG koko:K01783
KEGG ReactionR01529
KEGG Pathwayko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230
KEGG ModuleM00004,M00007
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ribulose-phosphate 3-epimerase activity
EggNOG OGsCOG0036@1,COG0554@1,KOG2517@2759,KOG3111@2759
EC5.1.3.1
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons4
Model size1404
Cds size666
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig765.15647.1prot_H-paniculata_contig765.15647.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig765 26719..31205 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930945.2714243-UTR-H-paniculata_contig765:26059..267181622930945.2714243-UTR-H-paniculata_contig765:26059..26718Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig765 26060..26718 -
1691481522.1436183-UTR-H-paniculata_contig765:26059..267181691481522.1436183-UTR-H-paniculata_contig765:26059..26718Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig765 26060..26718 -
1622930945.3680456-UTR-H-paniculata_contig765:31205..312841622930945.3680456-UTR-H-paniculata_contig765:31205..31284Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig765 31206..31284 -
1691481522.2207246-UTR-H-paniculata_contig765:31205..312841691481522.2207246-UTR-H-paniculata_contig765:31205..31284Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig765 31206..31284 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930945.2957997-CDS-H-paniculata_contig765:26718..268861622930945.2957997-CDS-H-paniculata_contig765:26718..26886Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig765 26719..26886 -
1691481522.1578772-CDS-H-paniculata_contig765:26718..268861691481522.1578772-CDS-H-paniculata_contig765:26718..26886Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig765 26719..26886 -
1622930945.3158443-CDS-H-paniculata_contig765:27783..279991622930945.3158443-CDS-H-paniculata_contig765:27783..27999Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig765 27784..27999 -
1691481522.171025-CDS-H-paniculata_contig765:27783..279991691481522.171025-CDS-H-paniculata_contig765:27783..27999Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig765 27784..27999 -
1622930945.3327007-CDS-H-paniculata_contig765:30026..302181622930945.3327007-CDS-H-paniculata_contig765:30026..30218Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig765 30027..30218 -
1691481522.1888137-CDS-H-paniculata_contig765:30026..302181691481522.1888137-CDS-H-paniculata_contig765:30026..30218Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig765 30027..30218 -
1622930945.349921-CDS-H-paniculata_contig765:31115..312051622930945.349921-CDS-H-paniculata_contig765:31115..31205Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig765 31116..31205 -
1691481522.2080936-CDS-H-paniculata_contig765:31115..312051691481522.2080936-CDS-H-paniculata_contig765:31115..31205Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig765 31116..31205 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig765.15647.1

>prot_H-paniculata_contig765.15647.1 ID=prot_H-paniculata_contig765.15647.1|Name=mRNA_H-paniculata_contig765.15647.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=222bp
MTALSSEVSKVLKAGADWIHVDVVDNHFAKVLTFGPPIVASLRRKHRSAF
LDVHLAVERPSEYVDVLEKAGASQVLFHPESFSATTADEEMEKLALQIRS
TGMRAGVALRPETPVSAIAFLLRPKQLLQCVDILAVQPGFGGQKFDAGVL
RKVKELRSMCPGLDIQVDGGVNVDTASACVAAGANILTSGSFIFTDSDGE
SYAGAVQELRRTLSTKWKLAT*
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mRNA from alignment at H-paniculata_contig765:26060..31284-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig765.15647.1 ID=mRNA_H-paniculata_contig765.15647.1|Name=mRNA_H-paniculata_contig765.15647.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5225bp|location=Sequence derived from alignment at H-paniculata_contig765:26060..31284- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGCAAGTGGAGCGGCCGCGGGGGGGCAGGGGGTGGTAGAGGTGTGTGGGC
GGGTCAATGCCTCCATTTTGGCGGCGGACATGACTGCTTTGTCGTCCGAG
GTGTCCAAGGTGTTGAAGGCAGGCGCGGACTGGATTCACGTCGATGTCGT
GGACAACCACTTTGCTAAGGCGAGATGAGGGTGCTGTACTACTTGAGCAT
TTTGCATGGCTCTTCACGGAAGGGTAATCATGATGTATTTACCACGAAAT
TATACGTTATATGGTAGTTAGGGTAAGGTATAACCGTACGCGATTATCGT
ACTGTACAAATACCACGGTAACACCGAAAACGTTTCCCGCATGAACGCAG
AATTACTGCGAGGAAAATCCATCTTACCGCGAAAGTCTATCACCATACCG
TACAGCTTCCCTACAGTGTAGTCAGTACCGCTCAAGCGCACGGTGGATGA
ACCCCAGGACAAATGCCAGCTGAGAGCTGCGCTAAGCTTAAATTTCAAAT
TTTGGCCTATAGTGAGCATCGTGTCTGACCGATCTGAGTGATGTGCACGT
CGCTAAAAAGAAACAGTCAAGTATTGGCCAGTTTACAGGTAGGTGGTTGC
CAAAGTGTGGGGTCATCGTCGAACATGAGTAGTGCCAGCAATGGCAACAC
AGGGGGTGCTAATGCACCTCCTGCTGCCCCTGTTGGTGCTGCGGCCGCAG
CTCTTGTAGCTTCTGCTGACTCCACTCAATCGCACAACTCAATGCCTAGT
CAGGCATCCAGGAGATGCCCCATGCTCTCCTACGTTGCTCAACATTACCC
AGCCTTCCGCGACTGGATTTCGCGGCATTCTTGAGACAACGGAGAAAAAA
ATTCTCCAACCCTTGTACGGGGCCAAGTCCCCGCCGCCTCTGACTCCCCC
CTCCCTTTCTTTTCCGCTCCACATCTCTCCTATAACTTGTTGACCGAATT
TGGCTGGTGATTGTACATTATATGCCGTCCAAATTTGATGTTGACCGAAA
GGTCACAAGTTACTCAGACGTTGCATCCTCCCGTCCCCCTCAACCTTCTG
CCTCGACCTTGAACAGGTGCTAACCTTCGGCCCGCCGATTGTAGCCAGCC
TCCGACGCAAGCACCGGTCGGCGTTTCTGGACGTGCATCTCGCGGTCGAG
CGTCCAAGCGAATACGTGGACGTTCTGGAGAAGGCGGGAGCAAGTCAAGT
CTTGTTCCATCCGGAATCCTTCTCTGCGACGACTGCTGACGAGGAGATGG
AGAAGTTGGTGAGAATACGTGGTACGCAGTAACAGCCACTATTTGCTGTT
CGGCCGCAAGTATTCACACCTCGGATGAAGGAGAGGTGCCATGAAGATCC
TATGTCTTTCTTGACCTCCATCCGCAGTGCAATGAATGTCAGTGAAGGCA
GCTTAAAAGTGATGAGGGGCAACTAAATGCGAAGCTACAAAATCCGATGA
AGACGAGGAAGGTATCTATTTGCGAAGTAAACTCCAACGAAGGTGATGAA
GGCAGCTAATTACGGAAGTGAATACGTGATGAAGGGGATGGAGGCAGTTA
ATTGTGAAATTGATTCGGAGATGAAGGCATAGCTGGTCCTTTACCGCTCC
TTTATTCGAGGTGTTGGTGTTTCATGTTTTTTTTAACTGTGGTAGACTAG
TCTAGAATTTTCACACACGCTGGGTAAAAAGTACGAAGTTCTTGGTGTGA
AAAATGGGCATAGTTGCCGCAGATTTCGCATGGATGGATTTGCCGATGTT
TGCAGTGTAAAATGAGCAATATTTCCATAGATGATCAAATTTATACTCCA
AGCTCGACCTTGTGTTCTTTCTCGATACAAAAATAGGCTAATTGCCAAAG
TAAGATGTACCTCGGTACCTCTCGACCATGTTAAGGCGCCGCGCAGAGCC
GATGCGGGGGAGGCGCTCCTGGTGCGTAGGCTCGACGACCTCTACATACC
CTGTTCTCAACCAGGGAGGTCTATAGCCCTCCTTAGACTACCCGACCACC
CTTTCCCCGCGGAAAAATGCCTTAATCATCATATACTCACTCGCTTCGTA
ACGGATGCTTCTACCGCGAAGCCAAGTTCACTTGGAGTGGCCACAAGTGC
TCAAGTTACAACCTTTCTTTCCCGAACAGGTTAGGCTTTCCCTGTTTTTG
CCGAGAGGTGTCACTTTCTTCGGCTGATTCTGTTCCTTTTCCTAGCCAAC
CCGGGTACGTTTCTCTTCGTTTATAAAGCGGCGATTGGAATTTATTCAGG
GACGGGCGTTCTCTATTTCCCGTCCCATGGAGAGAACCAAAAACGTGCAC
TTACCAAACTGGTTCCGTATGACCTAGCTACCTTGGCAAAGCTAACATCT
CGTCTAACTGCGTTGACAGAGCGGGTGCGTCTGCATGTGTTGGCAAGACT
TAGTACATCTAACCTAACTGCGTTAGATTAGCAGGGCATATGCGAGCAAA
TCAGCAGCCGCCCTGCGCGATGCCCTCCAATGGCCGAAAATGACCAAGGT
ACACCTTTTCTGTAGGAAGTGCCCCCCTGCCCCCCCGAAAAAAAATAGAC
CGTTTTGGTGCGGTTTGAAAGACAGAGATGAGTCGACGCCTCTTCGAGAT
CTATCAGTTTGTCGACGATGGACGAACTCCGTTGGCATTACAACAGCGCC
TCATTTGTCTGAAAATTCGAGCGTTAAACACTCTGTCACGTCGGTGGCGT
TTTTTACTCCAAACTATGGTATGTACTTACTGTGAGAGATACGAAACTCC
ATGGCGAACCGAACGAGGGGGGATGGAATGGAGGGGGGGGGGGGCTTAGG
GAGGGTATTCTTTTTTTTTTTTAATCATTTGGCTGTTATTTTTGACCAGG
CGTCCTCTCTACACGGCAGACGAAATGTGTGAGGGGAGCGTTTGTAGTGT
AGTAACACGGTAAGACGTTCCAGGTGTATTTCTATCGGAGGTATTACTGG
TATTGTGTGTGCTGCAGACTTACACCCGGGACCGAGATCGAATACCAGAG
TCCGGGAGCACAACTGCCGCGGGAACCAGTCTACCGCGAGACCATTGTTT
TCTCCTTGAGTTTCCTCCGAAGTTATTTTCCCCAGCCAGTACAATCTACC
TCTACGTTGTACCTGCTGAATTCTGACGTTATAAAGGATGACGAGTGCGG
CCACCAATCTTTGTTTTTGTATCTGGTTCTCTAGTATTTCGTAAATCTCC
CCAATTTGACCGCAACCTACATGTGACCTTCGACCCGCCGTCATGATTCA
TGACTCATGACCGTGTCCCGCAAAAAACAAAATAGGCGCTACAAATACGG
TCGACAGGTATGCGAGCGGGCGTTGCACTGAGACCCGAGACGCCGGTGTC
AGCTATCGCCTTTCTGCTAAGGCCTAAGCAGCTGCTACAATGTGTCGATA
TCTTGGCCGTGCAGCCGGGTTTCGGAGGCCAGAAGTTCGACGCCGGGGTG
CTGCGCAAGGTAAAGGAATTGCGGTCCATGTGCCCAGGGCTGGATATACA
GGTGGGTTGAGTGTGTGAGTGTGTGTGTAGGGAGAGGGGGGCACTTTGTG
CCACTGGGCAAAAGTGGAGGGGCAAAAAACATGCAGCAGTCGACGTGCTT
TACCCTATTCCGCCCCTTAGCCATCCAAAGTAATGGCCAAGAATACGGAG
TACCTCATAAGGCGCTGAGGATAGTATTGTGGTCACACACAAGATAATAC
TACAAATGCCAGAGCACACCCTGCCAGAACTGTCCCGCTGCGCCTCGCGT
CCCCCATGCCGCCCCTCCAGCATGCAACGTTTTCTGTAGATGATATTGTG
TCTCAGTTTTCCGTTGGGATGGTGTTTGATGGTGGGGCGTTTTACTTTGC
CCCTGCATGTTGGAGTATGACTGTACTGTTATTAGCGCCCAACGTACGCA
CAAACTCCGTCAGGAGCGACCCTGCTGCCTCTGTTGTTCATCCTCTCGTC
CAGCCGTGGTGGCCTCCTATAACCCACTCAGTTTCCAACAGTTGGGGAAC
AAATACACCATACCTTATCTTGACAAAACTGAAAACTGGATAGCAGTGTA
TCTTAGTCCTTTTCATACGTGCTACGTGTCGGCACTGAGGATCGAACGAT
CGTTGTAGACGAAGAACTGCTGCCTTATTCGTGTGGGCTCAGGCTGACTG
TCCAATCGTCTCGTTTCCCCGTGTTGGTCAAGCTTTGCTCGTTTTGAAAC
CTTTGGACGAAATCTGAGTAGTAATAGTTGACCAATAGGAAAACTGAGAG
TATATTGTTCCTTTTATTCCTAACTGTTCGTTTATTATTGTTGCTTAGGG
AAGATGATTGCTTCACTAGACTACCATCTCAAAATGTTCGCTATGATGCA
AAAGCGTTTTTTTGTTGCTATGTGTTATTCGGTCATCACCCACTGGAGGT
GGACGGAGGGGTGAATGTGGACACTGCATCGGCCTGCGTGGCTGCGGGAG
CGAATATCCTCACATCAGGTAGCTTCATCTTCACCGACAGCGACGGGGAG
AGCTATGCGGGGGCGGTCCAGGAACTCCGGCGGACGTTGTCGACGAAGTG
GAAGCTGGCAACGTAGTCAGGAATCTTCGCGCCTTCCTTTTATTTTCGTT
CTTTCGTGCGCTTGTAGTTCGAGTAAAAAAGCCATGGTGCGCATATGTAT
TTCGTGTTTTCTGGACAAAAATTGCACAAGTTGGTTGTTACTCGTATGGT
CGGCTCATGTTTTGCCAAGGTTTTAAGATTAGAACAGCCAGCAAGCATAT
ATTTTTCAGCGTAGTTGCTCGCCTTCTTGAGGAGAGGTGCTGAGGTAGTG
CTGTAGTGAAGCCAAGACGAGCAGGAGTATGGGGTTTGCTGACCTGTCTG
AGTTTTGCTTTATTTTTTTGTAATACTGAGATAGATGCTATTTCTTTGTT
CTTTGTGCTTTGCCCATAATGTTGATATGACGTACCTCCTCATGGCAATT
GGCCACGCACACGTGAGCGGGGTCTACGACGCATGAGGGGATGAAGCATA
TGGCCATGACTGCATGACTACATGCAATGAATGGCTCATGAAGTCATCGT
CTGCTGCTTTGCCCTGCAACATGACCGGATATATACTTGCCGGGGGGACG
AAGTACGTGGCGATCGTGGGGGCGGTAACGCCGTACACTGAATATCCTGC
GGATGAGGTTCAGAGATGTTTTTGACAGGTGATCATATCTTGTCAGACCG
CACTTCACCCATTATTCAGTAATAT
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Coding sequence (CDS) from alignment at H-paniculata_contig765:26060..31284-

>mRNA_H-paniculata_contig765.15647.1 ID=mRNA_H-paniculata_contig765.15647.1|Name=mRNA_H-paniculata_contig765.15647.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1332bp|location=Sequence derived from alignment at H-paniculata_contig765:26060..31284- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACTGCTTTGTCGTCCGAGGTGTCCAAGGTGTTGAAGGCAGGCGCGGA
CTGGATTCACGTCGATGTCGTGGACAACCACTTTGCTAAGATGACTGCTT
TGTCGTCCGAGGTGTCCAAGGTGTTGAAGGCAGGCGCGGACTGGATTCAC
GTCGATGTCGTGGACAACCACTTTGCTAAGGTGCTAACCTTCGGCCCGCC
GATTGTAGCCAGCCTCCGACGCAAGCACCGGTCGGCGTTTCTGGACGTGC
ATCTCGCGGTCGAGCGTCCAAGCGAATACGTGGACGTTCTGGAGAAGGCG
GGAGCAAGTCAAGTCTTGTTCCATCCGGAATCCTTCTCTGCGACGACTGC
TGACGAGGAGATGGAGAAGTTGGTGCTAACCTTCGGCCCGCCGATTGTAG
CCAGCCTCCGACGCAAGCACCGGTCGGCGTTTCTGGACGTGCATCTCGCG
GTCGAGCGTCCAAGCGAATACGTGGACGTTCTGGAGAAGGCGGGAGCAAG
TCAAGTCTTGTTCCATCCGGAATCCTTCTCTGCGACGACTGCTGACGAGG
AGATGGAGAAGTTGGCGCTACAAATACGGTCGACAGGTATGCGAGCGGGC
GTTGCACTGAGACCCGAGACGCCGGTGTCAGCTATCGCCTTTCTGCTAAG
GCCTAAGCAGCTGCTACAATGTGTCGATATCTTGGCCGTGCAGCCGGGTT
TCGGAGGCCAGAAGTTCGACGCCGGGGTGCTGCGCAAGGTAAAGGAATTG
CGGTCCATGTGCCCAGGGCTGGATATACAGGCGCTACAAATACGGTCGAC
AGGTATGCGAGCGGGCGTTGCACTGAGACCCGAGACGCCGGTGTCAGCTA
TCGCCTTTCTGCTAAGGCCTAAGCAGCTGCTACAATGTGTCGATATCTTG
GCCGTGCAGCCGGGTTTCGGAGGCCAGAAGTTCGACGCCGGGGTGCTGCG
CAAGGTAAAGGAATTGCGGTCCATGTGCCCAGGGCTGGATATACAGGTGG
ACGGAGGGGTGAATGTGGACACTGCATCGGCCTGCGTGGCTGCGGGAGCG
AATATCCTCACATCAGGTAGCTTCATCTTCACCGACAGCGACGGGGAGAG
CTATGCGGGGGCGGTCCAGGAACTCCGGCGGACGTTGTCGACGAAGTGGA
AGCTGGCAACGTAGGTGGACGGAGGGGTGAATGTGGACACTGCATCGGCC
TGCGTGGCTGCGGGAGCGAATATCCTCACATCAGGTAGCTTCATCTTCAC
CGACAGCGACGGGGAGAGCTATGCGGGGGCGGTCCAGGAACTCCGGCGGA
CGTTGTCGACGAAGTGGAAGCTGGCAACGTAG
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