mRNA_H-paniculata_contig7627.15619.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7627.15619.1 vs. uniprot
Match: D7FSI3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI3_ECTSI) HSP 1 Score: 107 bits (267), Expect = 2.100e-27 Identity = 55/77 (71.43%), Postives = 68/77 (88.31%), Query Frame = 3
Query: 3 FSRPMDIPEEGIEAAVAVMRSGRLFRYSCASAEGSQVALAEREFAEAAGARFAVGVNSCSSAILIALLGVGVQAGDQ 233
F+RP+DIPEEG++ A+ V+RSGRLFRYS +AE SQVALAE +FA+A GAR+AVGVNSCSSAILI L+ VGV+AGD+
Sbjct: 64 FTRPLDIPEEGLQTAMEVLRSGRLFRYSTEAAELSQVALAEADFAQAMGARYAVGVNSCSSAILIGLMCVGVKAGDE 140
BLAST of mRNA_H-paniculata_contig7627.15619.1 vs. uniprot
Match: A0A7S3BR70_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BR70_9VIRI) HSP 1 Score: 101 bits (252), Expect = 7.810e-25 Identity = 51/77 (66.23%), Postives = 64/77 (83.12%), Query Frame = 3
Query: 3 FSRPMDIPEEGIEAAVAVMRSGRLFRYSCASAEGSQVALAEREFAEAAGARFAVGVNSCSSAILIALLGVGVQAGDQ 233
FS+PM IP+EGI+AAV VMR+GR+FRYS SAE SQVA AE+EFAE G ++A+ VNSCSSAI +A++ VGV+ GDQ
Sbjct: 57 FSKPMSIPQEGIDAAVEVMRTGRIFRYSSTSAETSQVANAEKEFAEMVGQKYAIAVNSCSSAIFVAMMCVGVKPGDQ 133
BLAST of mRNA_H-paniculata_contig7627.15619.1 vs. uniprot
Match: A0A7S3FD09_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3FD09_9VIRI) HSP 1 Score: 101 bits (252), Expect = 1.270e-23 Identity = 51/77 (66.23%), Postives = 64/77 (83.12%), Query Frame = 3
Query: 3 FSRPMDIPEEGIEAAVAVMRSGRLFRYSCASAEGSQVALAEREFAEAAGARFAVGVNSCSSAILIALLGVGVQAGDQ 233
FS+PM IP+EGI+AAV VMR+GR+FRYS SAE SQVA AE+EFAE G ++A+ VNSCSSAI +A++ VGV+ GDQ
Sbjct: 57 FSKPMSIPQEGIDAAVEVMRTGRIFRYSSTSAETSQVANAEKEFAEMVGQKYAIAVNSCSSAIFVAMMCVGVKPGDQ 133
BLAST of mRNA_H-paniculata_contig7627.15619.1 vs. uniprot
Match: A0A7S4E6V5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E6V5_9STRA) HSP 1 Score: 100 bits (249), Expect = 3.160e-23 Identity = 52/77 (67.53%), Postives = 61/77 (79.22%), Query Frame = 3
Query: 3 FSRPMDIPEEGIEAAVAVMRSGRLFRYSCASAEGSQVALAEREFAEAAGARFAVGVNSCSSAILIALLGVGVQAGDQ 233
F+RPM IPEEGI AAV VMR GRLFRY SAE SQVA AE+EFA ++A+GVNSCSSAI++AL+ VGV+ GDQ
Sbjct: 47 FTRPMSIPEEGIAAAVEVMRGGRLFRYCATSAETSQVAQAEKEFAAMVNQKYALGVNSCSSAIMLALMAVGVEPGDQ 123
BLAST of mRNA_H-paniculata_contig7627.15619.1 vs. uniprot
Match: A0A7S3ZU99_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZU99_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 1.180e-22 Identity = 52/77 (67.53%), Postives = 59/77 (76.62%), Query Frame = 3
Query: 3 FSRPMDIPEEGIEAAVAVMRSGRLFRYSCASAEGSQVALAEREFAEAAGARFAVGVNSCSSAILIALLGVGVQAGDQ 233
FSRPM IPEEGI AAV VMR GRLFRY SAE S VA AE+EFA ++A+GVNSCSSAI++AL+ VGV GDQ
Sbjct: 50 FSRPMSIPEEGIAAAVEVMRGGRLFRYCATSAETSHVAQAEKEFAAMVNQKYALGVNSCSSAIMLALMAVGVDPGDQ 126
BLAST of mRNA_H-paniculata_contig7627.15619.1 vs. uniprot
Match: K8ECV9_9CHLO (Aminotransferase, DegT/DnrJ/EryC1/StrS family protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8ECV9_9CHLO) HSP 1 Score: 97.1 bits (240), Expect = 7.840e-22 Identity = 49/77 (63.64%), Postives = 60/77 (77.92%), Query Frame = 3
Query: 3 FSRPMDIPEEGIEAAVAVMRSGRLFRYSCASAEGSQVALAEREFAEAAGARFAVGVNSCSSAILIALLGVGVQAGDQ 233
FS+PM IP EGIEAA+ VM SGR+FRY SAE S+VA AE +FAE G ++A+GVNSCSSAI IA+L GV+ GD+
Sbjct: 117 FSKPMSIPTEGIEAAIRVMESGRVFRYCATSAETSEVAQAEDQFAEMVGQKYAIGVNSCSSAIFIAMLATGVEQGDK 193
BLAST of mRNA_H-paniculata_contig7627.15619.1 vs. uniprot
Match: A0A7S0J159_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J159_9EUKA) HSP 1 Score: 89.7 bits (221), Expect = 3.150e-19 Identity = 50/77 (64.94%), Postives = 60/77 (77.92%), Query Frame = 3
Query: 3 FSRPMDIPEEGIEAAVAVMRSGRLFRYSCASAEGSQVALAEREFAEAAGARFAVGVNSCSSAILIALLGVGVQAGDQ 233
FS+PM +P GIEAAV VMRSGRLFRY A SQVALAE EFA+ ++A+GVNSCSSAI++AL+ VGV AGD+
Sbjct: 112 FSKPMAVPAAGIEAAVEVMRSGRLFRYC---AVDSQVALAESEFAQMVDQKYALGVNSCSSAIMLALMVVGVAAGDR 185
BLAST of mRNA_H-paniculata_contig7627.15619.1 vs. uniprot
Match: D7FMY1_ECTSI (Aminotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMY1_ECTSI) HSP 1 Score: 84.7 bits (208), Expect = 1.670e-17 Identity = 48/83 (57.83%), Postives = 59/83 (71.08%), Query Frame = 3
Query: 3 FSRPMDIPEEGIEAAVAVMRSGRLFRYSCASAEGSQVALAEREFA------EAAGARFAVGVNSCSSAILIALLGVGVQAGDQ 233
F+ PM IPEE I V V+RSGR+ RYS +SAE SQVA E+E E G ++A+GVNSCSSAILIALL VGV++GD+
Sbjct: 44 FTLPMGIPEESIAGVVDVLRSGRINRYSASSAEASQVAQLEQELVDFTGRGEGPGVKYALGVNSCSSAILIALLSVGVKSGDE 126
BLAST of mRNA_H-paniculata_contig7627.15619.1 vs. uniprot
Match: A0A2E3H0W2_9RHOB (Aminotransferase n=1 Tax=Pseudooceanicola sp. TaxID=1914328 RepID=A0A2E3H0W2_9RHOB) HSP 1 Score: 77.8 bits (190), Expect = 4.510e-15 Identity = 44/76 (57.89%), Postives = 53/76 (69.74%), Query Frame = 3
Query: 3 FSRPMDIPEEGIEAAVAVMRSGRLFRYSCASAEGSQVALAEREFAEAAGARFAVGVNSCSSAILIALLGVGVQAGD 230
F++ IPEE I+AAVAVMRSGRL RY+ A E VAL E+EFAEA GAR+A+ S +AI AL GV+AGD
Sbjct: 9 FTQQEPIPEEAIDAAVAVMRSGRLHRYNVADGEAGDVALLEQEFAEAMGARYALATASGGAAIATALRAAGVRAGD 84
BLAST of mRNA_H-paniculata_contig7627.15619.1 vs. uniprot
Match: A0A399J112_9RHOB (Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme n=1 Tax=Pseudopuniceibacterium sediminis TaxID=2211117 RepID=A0A399J112_9RHOB) HSP 1 Score: 77.4 bits (189), Expect = 6.090e-15 Identity = 44/77 (57.14%), Postives = 54/77 (70.13%), Query Frame = 3
Query: 3 FSRPMDIPEEGIEAAVAVMRSGRLFRYSCASAEGSQVALAEREFAEAAGARFAVGVNSCSSAILIALLGVGVQAGDQ 233
F++ IPEE IEAAVAVMRSGRL RY+ A+ E + AL E+EFAE GAR+A+ V S AI AL VGV+ GD+
Sbjct: 9 FTQQEPIPEEAIEAAVAVMRSGRLHRYNTAAGEAGETALLEQEFAEMTGARYALAVASGGHAISTALRAVGVRPGDR 85 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7627.15619.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7627.15619.1 >prot_H-paniculata_contig7627.15619.1 ID=prot_H-paniculata_contig7627.15619.1|Name=mRNA_H-paniculata_contig7627.15619.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=73bp MDIPEEGIEAAVAVMRSGRLFRYSCASAEGSQVALAEREFAEAAGARFAVback to top mRNA from alignment at H-paniculata_contig7627:5107..5339+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7627.15619.1 ID=mRNA_H-paniculata_contig7627.15619.1|Name=mRNA_H-paniculata_contig7627.15619.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=233bp|location=Sequence derived from alignment at H-paniculata_contig7627:5107..5339+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7627:5107..5339+ >mRNA_H-paniculata_contig7627.15619.1 ID=mRNA_H-paniculata_contig7627.15619.1|Name=mRNA_H-paniculata_contig7627.15619.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=438bp|location=Sequence derived from alignment at H-paniculata_contig7627:5107..5339+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |