mRNA_H-paniculata_contig7600.15596.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig7600.15596.1
Unique NamemRNA_H-paniculata_contig7600.15596.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig7600.15596.1 vs. uniprot
Match: D8LTC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTC9_ECTSI)

HSP 1 Score: 329 bits (844), Expect = 9.520e-108
Identity = 187/291 (64.26%), Postives = 215/291 (73.88%), Query Frame = 3
Query:   15 KISEKDYFTRATEFKVWLFQKKKLYFEDLTSARSHELFEKFVKDWNRGKLEPHFYEGRLPEDLVVRAKKTQHQWGFINKLSDQDQMQLATANDSVHASTERVKGVTSNVPMAPAGSVQTAASGKSSRVMMAPPPPRGVADKRSGGDGNRGDNYEDGNGDGRRTESKRRRKHEK----EKHAVVLDEIAPKETGRQAIADKRREVGARTHAAAKEREDAADGLDMRETDTMGGGDNFQEMLAFSKNNRQRRETAKEEKLRCLAAKEEEKRAAFLAQMGLKPGQKITIQPRRD 875
            KISEKDYF RA EFKVWL  KKK +FEDLTS  SHELF+KF+KDWNRGKL+PHFYEGRLP++L+ R KKTQH+WGF+N+LSD+DQMQL  ANDSVH+STE+VKG TSNVP+ P GS  TA              P  V  K++  DG  GD                          EKHAVVLDEIAPKETGRQA+ DKRR VGARTHAAAKEREDAADGLDM+E+DTMGG D+F+E LA +++ + RR+ AK E L+ LAAKEEEKRAAF+AQMGLK GQKITIQPRRD
Sbjct:   13 KISEKDYFIRAVEFKVWLCHKKKKFFEDLTSDESHELFDKFIKDWNRGKLDPHFYEGRLPDELIARTKKTQHKWGFVNRLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPVGSAATA--------------PGVVVGKQA--DGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXEKHAVVLDEIAPKETGRQALLDKRRVVGARTHAAAKEREDAADGLDMKESDTMGGSDSFRETLARAQHGKHRRQMAKTEHLQGLAAKEEEKRAAFMAQMGLKAGQKITIQPRRD 287          
BLAST of mRNA_H-paniculata_contig7600.15596.1 vs. uniprot
Match: A0A6H5L8Q7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8Q7_9PHAE)

HSP 1 Score: 332 bits (851), Expect = 1.840e-107
Identity = 189/294 (64.29%), Postives = 219/294 (74.49%), Query Frame = 3
Query:    6 AELKISEKDYFTRATEFKVWLFQKKKLYFEDLTSARSHELFEKFVKDWNRGKLEPHFYEGRLPEDLVVRAKKTQHQWGFINKLSDQDQMQLATANDSVHASTERVKGVTSNVPMAPAGSVQTAASGKSSRVMMAPPPPRGVADKRSGGDGNRGDNYEDGNGDGRRTESKRRRKHE----KEKHAVVLDEIAPKETGRQAIADKRREVGARTHAAAKEREDAADGLDMRETDTMGGGDNFQEMLAFSKNNRQRRETAKEEKLRCLAAKEEEKRAAFLAQMGLKPGQKITIQPRRD 875
            AE++ISEKDYF RA EFKVWL  KK+  FEDLTS  SHELF+KFVKDWNRGKL+PHFYEGRLP++L+ R KKTQH+WGF+N+LSD+DQMQL  ANDSVH+STE+VKG TSNVP+ P GS  TA              P  V  K++  DG  GD                         +EKHAVVLDEIAPKETGRQA+ DKRR VGARTHAAAKEREDAADGLDM+E+DTMGG D+F+E LA +++ +QRR+ AK E L+ LAAKEEEKRAAF+AQMGLK GQKITIQPRRD
Sbjct:  103 AEIQISEKDYFIRAMEFKVWLCHKKETLFEDLTSDESHELFDKFVKDWNRGKLDPHFYEGRLPDELIARTKKTQHRWGFVNRLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPIGSAATA--------------PGLVVKKQA--DGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXREKHAVVLDEIAPKETGRQAVLDKRRVVGARTHAAAKEREDAADGLDMKESDTMGGSDSFRETLARAQHGKQRRQMAKTEHLQGLAAKEEEKRAAFMAQMGLKAGQKITIQPRRD 380          
BLAST of mRNA_H-paniculata_contig7600.15596.1 vs. uniprot
Match: A0A836CIB7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIB7_9STRA)

HSP 1 Score: 174 bits (441), Expect = 6.660e-47
Identity = 104/230 (45.22%), Postives = 133/230 (57.83%), Query Frame = 3
Query:   12 LKISEKDYFTRATEFKVWLFQKKKLYFEDLTSARSHELFEKFVKDWNRGKLEPHFYEGRLPEDLVVRAKKTQHQWGFINKLSDQDQMQLATANDSVHASTERVKGVTSNVPMAPAGSVQTAASGKSSRVMMAPPPPRGVADKRSGGDGNRGDNYEDGNGDGRRTESKRRRKHEKEKHAVVLDEIAPKETGRQAIADKRREVGARTHAAAKEREDAADGLDMRETDTMGGG 701
            +K++E DYF R  EF VWL   ++  FE+L+S  +H+ F KF K+WN GKLEP +Y G +PED V  AKKTQH WGF+ +++D+D+  L  A +S+   T   K        +  GS   AAS  ++ V  +  P       R GG+G+ G +   G G G            K  HA  LDEIAPKETGRQA  DKRR VGA  H AA+ERE   DGLD+ E DTMGGG
Sbjct:   58 VKLTEDDYFVRVDEFSVWLLDHRRKRFEELSSKDAHKQFAKFCKEWNAGKLEPTYYSGAIPEDKVAAAKKTQHSWGFVKRMTDRDKSTLKAATNSIKTDTAITKA-------SAGGSTACAASHATNMVRPSVAP-------RGGGEGDTGGSRGHGRGGGL-----------KAVHAAALDEIAPKETGRQAAIDKRRTVGAAMHGAAREREFQRDGLDLPEQDTMGGG 262          
BLAST of mRNA_H-paniculata_contig7600.15596.1 vs. uniprot
Match: A0A3F2RY91_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RY91_9STRA)

HSP 1 Score: 166 bits (420), Expect = 7.750e-44
Identity = 121/296 (40.88%), Postives = 169/296 (57.09%), Query Frame = 3
Query:   18 ISEKDYFTRATEFKVWLFQKKKLYFEDLTSARSHELFE-KFVKDWNRGKLEPHFYEGRLPEDLVVRAKKTQHQWGFINKLSDQDQMQLATANDSVHASTERVKGVTSNVPMAPAGSVQTAASGKSSRVMMAPPPPRGVADKRSGGDGNRGDNYEDGNGDGRRTESKRRRKHEKEKHAVVLDEIAPKETGRQAIADKRREVGARTHAAAKEREDAADGLDMRETDTMGGG-----DNFQEMLAFSKNNRQRRETAKEEKLRCLAAKEEEKRAAFLAQMGLKP----GQK-ITIQPRR 872
            ISE DYF RATEF+VWL Q K  Y +DL++  + +LF   FV+ WNRGKL   FY+G LP+ ++ + K+T+H+WGF+ KL ++++  LATA DSV  +T++   +                SG  + V     PPR   +        +G   ED     +R   K  RK EKE    V+DE+APKETGR+A   KRR++G + H AA++RED  DGLD+ E   MGGG     D+FQ  +A   + R+R++  ++ KL  LAAKE  +   FL  MGL      G+K +TI PRR
Sbjct:   67 ISEDDYFLRATEFRVWLTQSKGKYVDDLSTEEATQLFRGDFVRKWNRGKLAEMFYKG-LPDAVLEQTKRTRHRWGFVAKLGEKEKFALATAKDSVDVATKKKDLLN---------------SGNGASVKD---PPREKTETDRSNSRRKGREEEDKEETWKRR--KVERKKEKEYRDTVMDELAPKETGREAQIQKRRQLGEKLHGAARDREDTRDGLDVSEDFLMGGGRHGGEDDFQRRMAQRDSARRRKQGEQQAKLAGLAAKESARMDKFLEDMGLAGANTNGRKPMTIAPRR 341          
BLAST of mRNA_H-paniculata_contig7600.15596.1 vs. uniprot
Match: M4BMV4_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BMV4_HYAAE)

HSP 1 Score: 154 bits (389), Expect = 1.490e-39
Identity = 116/298 (38.93%), Postives = 170/298 (57.05%), Query Frame = 3
Query:   18 ISEKDYFTRATEFKVWLFQKKKLYFEDLTSARSHELF-EKFVKDWNRGKLEPHFYEGRLPEDLVVRAKKTQHQWGFINKLSDQDQMQLATANDSVHASTERVKGV-TSNVPMAPAGSVQTAASGKSSR-VMMAPPPPRGVADKRSGGDGNRGDNYEDGNGDGRRTESKRRRKHEKEKHAVVLDEIAPKETGRQAIADKRREVGARTHAAAKEREDAADGLDMRETDTMG--GGDN--FQEMLAFSKNNRQRRETAKEEKLRCLAAKEEEKRAAFLAQMGLKPG------QKITIQPRR 872
            I+E+DYF R TEF+VWL Q K  Y +DL+++ + +LF  +F K WNRG+L   FYEG L E +V + K+T+H W F++KLSD+++ ++ATA DSV  +T++   + +S+V        ++ + G+ +R VM   P  R    KR                  R+TE +R    EKE    ++DE+APK TGR+A   KRR++GA+ H AA++RE+A DGLD+ E   MG  GGDN   +  LA     R R++  +  K+  L AKE  +   FL  MGL  G      +  TI PR+
Sbjct:   48 ITEEDYFLRQTEFRVWLTQTKGKYVDDLSTSEAMKLFCTEFAKKWNRGQLASMFYEG-LSESVVEQTKRTRHCWNFVSKLSDKEKFEVATAKDSVDVATKKADLLLSSSVQKGEPAEAKSKSRGRDNRRVMEGIPEDREEVKKR------------------RKTERQR----EKEYGDTIVDELAPKATGREAHLMKRRQIGAKLHGAARDREEARDGLDLEEGFLMGMCGGDNDELKRHLASRDAARCRKQKEQFMKIADLKAKESARMDKFLEDMGLAAGPATNGSKSATIAPRQ 322          
BLAST of mRNA_H-paniculata_contig7600.15596.1 vs. uniprot
Match: H3H526_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H526_PHYRM)

HSP 1 Score: 154 bits (388), Expect = 1.520e-39
Identity = 106/264 (40.15%), Postives = 156/264 (59.09%), Query Frame = 3
Query:   15 KISEKDYFTRATEFKVWLFQKKKLYFEDLTSARSHELF-EKFVKDWNRGKLEPHFYEGRLPEDLVVRAKKTQHQWGFINKLSDQDQMQLATANDSVHASTERVKGVTSNVPMAPAGSVQTAASGKSSRVMMAPPPPRGVADKRSGGDGNRGDNYEDGNGDGRRTESKRRRK----HEKEKHAVVLDEIAPKETGRQAIADKRREVGARTHAAAKEREDAADGLDMRETDTMGGG-----DNFQEMLAFSKNNRQRRETAKEEKL 776
            KISE+DYF R TEF+VWL Q K  Y +DL++  + ELF ++F K WNRGKL   FYEG LP+ +V + K+T+H+WGF+ KL ++++ +LATA DSV  +T+R   ++S       GS + +  G           P+   D+ S     R    E+      + E  RRRK     E+E    V+DE+APK TGR+A  +KRR++  + H AA++R+DA DGLD+ E   MGGG     + F+  +A   + R+R++  +EEKL
Sbjct:   55 KISEEDYFLRQTEFRVWLAQTKGKYVDDLSTDEATELFTDQFAKKWNRGKLSTMFYEG-LPDAVVEQTKRTRHRWGFVAKLGEKEKFELATAKDSVDVATKRENLLSS-------GSKRESVKG-----------PQLEEDRDSSKSKRRAKELEED-----KEEQWRRRKLDQKREREYRDTVMDELAPKATGREAQIEKRRQLSQKLHGAARDRDDARDGLDVSEDFLMGGGRGDGDEEFKRRMAQRDSTRRRKQEMQEEKL 294          
BLAST of mRNA_H-paniculata_contig7600.15596.1 vs. uniprot
Match: W4GDA5_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GDA5_9STRA)

HSP 1 Score: 153 bits (387), Expect = 1.730e-39
Identity = 114/293 (38.91%), Postives = 164/293 (55.97%), Query Frame = 3
Query:    9 ELKISEKDYFTRATEFKVWLFQKKKLYFEDLTSARSHELFEKFVKDWNRGKLEPHFYEGRLPEDLVVRAKKTQHQWGFINKLSDQDQMQLATANDSVHASTERVKGVTSNVPMAPAGSVQTAASGKSSRVMMAPPP--PRGVADKRSGGDGNRGDNYEDGNGDGRRTESKRRRKHEKEKHAVVLDEIAPKETGRQAIADKRREVGARTHAAAKEREDAADGLDMRETDTMGGGDNFQEMLAFSKNNRQRRETAKEEKLRCLAAKEEE--KRAAFLAQMGLKPGQ-KITIQPRR 872
            E  ++  DYF +A EF+VWL  +K +YF+DLTSA +   FEKFV  WN  +LE  +Y  ++P+ ++    +T+H+WGF  K++D ++++LA+  D+V  ST   K  TS  P  P+ S  T      SR     P   PR V D                  D  R  +KR RK   +   +V +E+APK TGR A  +K+R+VGA  H AA++++DA DGL + E   MGG D+FQ  +   K  + RR  A+E   R  AAK+ E  +   FLA MG++PGQ +ITI PR+
Sbjct:   38 ETTLTVDDYFQKAKEFRVWLKLEKGVYFDDLTSADAQAAFEKFVSKWNANRLESMYYT-KIPQQVLESVHRTKHKWGF--KMNDHERLELASTKDTVDISTN--KETTSARPALPSHSTAT------SRATPKQPASSPREVDDS-----------------DDDRKRAKRDRKAYNKHKDMVHEELAPKATGRDAAIEKKRQVGAAVHGAARQKDDAKDGLTLSEDFLMGGSDDFQARVQRRKQAQGRR--AEEMNQRVTAAKDAEAARMQKFLADMGIQPGQERITIAPRQ 300          
BLAST of mRNA_H-paniculata_contig7600.15596.1 vs. uniprot
Match: A0A067BZG8_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BZG8_SAPPC)

HSP 1 Score: 151 bits (381), Expect = 1.070e-38
Identity = 98/287 (34.15%), Postives = 156/287 (54.36%), Query Frame = 3
Query:   15 KISEKDYFTRATEFKVWLFQKKKLYFEDLTSARSHELFEKFVKDWNRGKLEPHFYEGRLPEDLVVRAKKTQHQWGFINKLSDQDQMQLATANDSVHASTERVKGVTSNVPMAPAGSVQTAASGKSSRVMMAPPPPRGVADKRSGGDGNRGDNYEDGNGDGRRTESKRRRKHEKEKHAVVLDEIAPKETGRQAIADKRREVGARTHAAAKEREDAADGLDMRETDTMGGGDNFQEMLAFSKNNRQRRETAKEEKLRCLAAKEEEKRAAFLAQMGLKPGQ-KITIQPRR 872
            +IS  DYF +A EF+VWL  +KK YFEDLTS  + + F+KF + WN GKL+  +Y   +P+ ++    +T+H+WGF+  L++ +++ LA+  D+V  +T +                 + AS  ++R   A  PPR    +             D      + E KR  KH++    +V++E+APK TGR A  +K+RE  A  H AA+ +EDA DGLD+ +   MGG D+F   +   K  + +R+  K++++      E  +   FL  MG++PGQ +ITI PR+
Sbjct:   36 RISRDDYFEKAREFRVWLKTEKKRYFEDLTSDDAMQYFDKFARRWNDGKLDAMYYAS-IPQHILESVNRTKHKWGFLKNLNESERLHLASTKDTVDITTNK-----------------SGASSSTARPSKATSPPRSSKQQXXXXXXXXXXXXXD------KYERKRYHKHKE----LVMEELAPKATGRDATVEKKREKAATLHGAARAKEDAKDGLDLSDDFLMGGSDDFHARIQRRKAAQDKRQDEKQQRVTAAQEAEAARMQKFLQDMGIQPGQDRITIAPRQ 294          
BLAST of mRNA_H-paniculata_contig7600.15596.1 vs. uniprot
Match: A0A485KJU9_9STRA (Aste57867_8246 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KJU9_9STRA)

HSP 1 Score: 150 bits (380), Expect = 2.110e-38
Identity = 107/291 (36.77%), Postives = 167/291 (57.39%), Query Frame = 3
Query:    9 ELKISEKDYFTRATEFKVWLFQKKKLYFEDLTSARSHELFEKFVKDWNRGKLEPHFYEGRLPEDLVVRAKKTQHQWGFINKLSDQDQMQLATANDSVHASTERVKGVTSNVPMAPAGSVQTAASGKSSRVMMAPPPPRGVADKRSGGDGNRGDNYEDGNGDGRRTESKRRRKHEKEKHAVVLDEIAPKETGRQAIADKRREVGARTHAAAKEREDAADGLDMRETDTMGGGDNFQEMLAFSKNNRQRRETAKEEKLRCLAAKEEE--KRAAFLAQMGLKPGQ-KITIQPRR 872
            +++ISE DYF +A EF+VWL  +K+LYF+DLTSA +   F KFV  WN GKL+  +Y  ++P+ ++   ++T+H+WG   K+++ ++++LA+  D+V  ST +           P  S  T+AS                A K+   D +     E       R  +KR +K   +   +VL+E+APK TGR+A  +K+R+V A  H AA++ EDA DGL + +   MGG D+FQ  +   K+ + RR   +E++ R  AA+E E  +   FLA MG++PGQ +ITI PR+
Sbjct:   45 DVQISEDDYFEKALEFRVWLKLEKRLYFDDLTSADAQGYFGKFVHKWNGGKLDSMYYT-KIPQHILEGIQRTKHKWGL--KMNETERLELASTKDTVDISTNKGTNHPPPYKSHPQTSKATSAS---------------FASKKRDDDSDXXXXXE-------RKRAKRDKKTYVKHKEMVLEELAPKATGREATIEKKRQVAASVHGAARQNEDAKDGLTLSDAFLMGGSDDFQARVQRRKHAQDRR--VEEQQQRVTAAQEAEAARMQKFLADMGIQPGQERITIAPRK 308          
BLAST of mRNA_H-paniculata_contig7600.15596.1 vs. uniprot
Match: A0A5D6Y8C8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8C8_9STRA)

HSP 1 Score: 149 bits (375), Expect = 1.340e-37
Identity = 115/311 (36.98%), Postives = 163/311 (52.41%), Query Frame = 3
Query:   15 KISEKDYFTRATEFKVWLFQKKKLYFEDLTSARSHELFE-KFVKDWNRGKLEPHFYEGRLPEDLVVRAKKTQHQWGFINKLSDQDQMQLATANDSVHASTERVKGVTSNVPMAPAGSVQTAASGKSSRVMMAPPPPRGVADKRSGGDGNRGDNYEDGNGDGR---------------------RTESKRRRKHEKEKHAVVLDEIAPKETGRQAIADKRREVGARTHAAAKEREDAADGLDMRETDTMGG-GDNFQEMLAFSKNNRQRRETAKEEKLRCLAAKEEEKRAAFLAQMGLKP--GQKITIQPRR 872
            +ISE D+F RATEF+VWL Q K  Y EDLT+  +  LF+ KFVK WNRG+L   FYEG +PE ++ + ++T+H WGF  +LSD++ MQLA+A DSV  +T +   + +  P APA                AP P       R+  D +                                    + KR R+H +     VL+E+APKETGR+A  +KRR+V  + H AA++RE+  DGLD+ +   MGG G + Q  L   +  R RR+  +++KL    AKE  +   FL  MG+    G+ ITI PR+
Sbjct:   28 EISEDDFFLRATEFRVWLAQTKNKYVEDLTTQEASALFQRKFVKKWNRGRLARMFYEG-IPEHVLEQTRRTKHTWGFAARLSDKEAMQLASARDSVGVATRKTDLLAT--PRAPA----------------APEPEPLERSSRTHHDADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHADRKRHRQHRES----VLEELAPKETGREAALEKRRQVAGKLHGAARDREENRDGLDVSDAFLMGGSGSDLQHRLQAREQARDRRQQEQQDKLDEFKAKEAARMDKFLQDMGISATAGKPITIAPRK 315          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7600.15596.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTC9_ECTSI9.520e-10864.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L8Q7_9PHAE1.840e-10764.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CIB7_9STRA6.660e-4745.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A3F2RY91_9STRA7.750e-4440.88Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
M4BMV4_HYAAE1.490e-3938.93Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
H3H526_PHYRM1.520e-3940.15Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
W4GDA5_9STRA1.730e-3938.91Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A067BZG8_SAPPC1.070e-3834.15Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A485KJU9_9STRA2.110e-3836.77Aste57867_8246 protein n=1 Tax=Aphanomyces stellat... [more]
A0A5D6Y8C8_9STRA1.340e-3736.98Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7600contigH-paniculata_contig7600:1024..5649 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score189.5
Seed ortholog evalue1.5e-45
Seed eggNOG ortholog2880.D8LTC9
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0007275,GO:0008150,GO:0009791,GO:0009908,GO:0009966,GO:0010646,GO:0010928,GO:0022414,GO:0023051,GO:0032501,GO:0032502,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0048367,GO:0048437,GO:0048438,GO:0048440,GO:0048467,GO:0048479,GO:0048480,GO:0048519,GO:0048523,GO:0048583,GO:0048608,GO:0048731,GO:0048827,GO:0048856,GO:0050789,GO:0050794,GO:0051302,GO:0051782,GO:0061458,GO:0065007,GO:0090567,GO:0099402
EggNOG OGs2BY93@1,2S2GY@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-12_006090.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1357
Cds size612
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7600.15596.1prot_H-paniculata_contig7600.15596.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig7600 1500..3170 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930938.5493882-UTR-H-paniculata_contig7600:1023..14991622930938.5493882-UTR-H-paniculata_contig7600:1023..1499Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7600 1024..1499 -
1691481519.4126496-UTR-H-paniculata_contig7600:1023..14991691481519.4126496-UTR-H-paniculata_contig7600:1023..1499Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7600 1024..1499 -
1622930938.6899898-UTR-H-paniculata_contig7600:3170..32011622930938.6899898-UTR-H-paniculata_contig7600:3170..3201Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7600 3171..3201 -
1691481519.4559743-UTR-H-paniculata_contig7600:3170..32011691481519.4559743-UTR-H-paniculata_contig7600:3170..3201Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7600 3171..3201 -
1622930938.706666-UTR-H-paniculata_contig7600:4428..45121622930938.706666-UTR-H-paniculata_contig7600:4428..4512Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7600 4429..4512 -
1691481519.4638467-UTR-H-paniculata_contig7600:4428..45121691481519.4638467-UTR-H-paniculata_contig7600:4428..4512Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7600 4429..4512 -
1622930938.7235832-UTR-H-paniculata_contig7600:5495..56491622930938.7235832-UTR-H-paniculata_contig7600:5495..5649Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7600 5496..5649 -
1691481519.4717367-UTR-H-paniculata_contig7600:5495..56491691481519.4717367-UTR-H-paniculata_contig7600:5495..5649Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7600 5496..5649 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930938.5636578-CDS-H-paniculata_contig7600:1499..16131622930938.5636578-CDS-H-paniculata_contig7600:1499..1613Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7600 1500..1613 -
1691481519.4230254-CDS-H-paniculata_contig7600:1499..16131691481519.4230254-CDS-H-paniculata_contig7600:1499..1613Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7600 1500..1613 -
1622930938.5795672-CDS-H-paniculata_contig7600:1858..20291622930938.5795672-CDS-H-paniculata_contig7600:1858..2029Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7600 1859..2029 -
1691481519.4312713-CDS-H-paniculata_contig7600:1858..20291691481519.4312713-CDS-H-paniculata_contig7600:1858..2029Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7600 1859..2029 -
1622930938.5928373-CDS-H-paniculata_contig7600:2257..25361622930938.5928373-CDS-H-paniculata_contig7600:2257..2536Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7600 2258..2536 -
1691481519.4396043-CDS-H-paniculata_contig7600:2257..25361691481519.4396043-CDS-H-paniculata_contig7600:2257..2536Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7600 2258..2536 -
1622930938.605688-CDS-H-paniculata_contig7600:3122..31701622930938.605688-CDS-H-paniculata_contig7600:3122..3170Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7600 3123..3170 -
1691481519.4480102-CDS-H-paniculata_contig7600:3122..31701691481519.4480102-CDS-H-paniculata_contig7600:3122..3170Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7600 3123..3170 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig7600.15596.1

>prot_H-paniculata_contig7600.15596.1 ID=prot_H-paniculata_contig7600.15596.1|Name=mRNA_H-paniculata_contig7600.15596.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=204bp
MQLATANDSVHASTERVKGVTSNVPMAPAGSVQTAASGKSSRVMMAPPPP
RGVADKRSGGDGNRGDNYEDGNGDGRRTESKRRRKHEKEKHAVVLDEIAP
KETGRQAIADKRREVGARTHAAAKEREDAADGLDMRETDTMGGGDNFQEM
LAFSKNNRQRRETAKEEKLRCLAAKEEEKRAAFLAQMGLKPGQKITIQPR
RDA*
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mRNA from alignment at H-paniculata_contig7600:1024..5649-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig7600.15596.1 ID=mRNA_H-paniculata_contig7600.15596.1|Name=mRNA_H-paniculata_contig7600.15596.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4626bp|location=Sequence derived from alignment at H-paniculata_contig7600:1024..5649- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTGCAGCGGAACTGAAGATATCTGAGAAGGACTACTTCACTCGAGCGACC GAATTCAAGGTGTGGCTGTTTCAGAAGAAAAAGTTGTACTTCGAGGATCT CACTTCTGCCAGGTCTCACGAGCTGTTCGAAAAGTTTGTCAAGGACTGGA ATAGGTGAGTTGGGTGATTTTCTTGTTATTGCCTCTCACTTTGTTGCCCA GCTCTATGGTGGCTTGGCGGCCGGAATTTTCGCTGGGTTTTATTTTACAG CGTTGTCTTCGGGGTATGTAGTGAAACGCAAACAGTACCCAGACACGAAT AGCAGCAGCTTGCAGTAGAGTTGGTAAAAGTAGTTTTGGAAGTGGGGGGA GCGAAAAATGGTATACCGTTGGCAGAGGAGATGCCAAGTGGTGTAATTCA TAAGAAGGAAGTCTTCACGTCATCGCCTCTTCGTAGCTCGTTTTGACGCA GCAACAGCCCTTGAGCGTACTCGGCGCTGCATTTACCGTTCACCAGGTTA TCTTGTCGCTTGATTCAGACAAAACAAAAACCACAGATTACTACGATACT GGGCGATTTGTTATACTCCAAGTAGTGGATCGGGTTGGTCATCCCCGTTG GAAAGCGCAGCCCATGGCACAGACCCTGGATAGGGCCCGTGTGTTGCCCA TTGGCTGGCAAATGCTTTCTAGCGTACCCGACCTTTTGCCTATGGGCTGC TCGGTGAGTTTGGTCGAGTCTATTCCCCCCTTGAGCCATGCCTTTGTCCG AGCTCGGTTGTATCGAGTATCGCCGCTGTGCATATGCACCGAAGTATCAC AGTCCACGCCAATACTTCACAGAGGTCGTTACATTTTATACGGCATCGCG ACAGATGGCAGCGTTGTAGAAAAGGTAGAACAGGGGGGCATGCTTCTGAG ACAGGCGTTGATGAAACCTGTAACCGTGGGGTAAAAATTGGGCCTTTTAT AACCGTCAAGGTGGGGGGAGGACCACTGACCTTCGTAGTTGTTCGCTTCG GAACTGATTTAGACTTGGGGTTACACGCATAACGCCTCCTCAACTCATTG GGCTGTTTATTGCTCGCCGCGCGACACTTGTTTCTTTTCACCCGCCGACC CATCTACCTTTCGTCTACGTTTCCGCGCGCTCCTCAGGGGAAAATTGGAG CCACATTTCTACGAGGGTCGCTTGCCGGAGGATCTCGTGGTGCGCGCGAA GAAGACGCAGCACCAGTGGGGGTAAGTAACCTTTCACGTCTTCCACAAAG CTGGCAATCTCAGGTTGTAATCTACATGCAAAAGGTTATCATACTCCCTC TCACGTGTGGTTTTTTTACTGCAGGCTTTTCTTGAAGATCGGTCTTGAGC ACTCCGTGTTTCCTGCGCATATCCTTGGTTTTGCAGAGAGCAAAGTGACG TTTTACAGGCGGTTGTTCCTGCTGTCTGCGTAAGCGACAAGAATGCTACA TTACGAATGTACGACGTCAGGGAGCTAGCCGTGTTAGAATAGGCTTCACA AGAAACTTGCTCCCCCGACTATATTTGCTTCTCTCCTGTTCTCCCGCGAC GGGCTGGTTGCCTGTCAGATCGGTGGAGAGCGCCTTTGTCCCTGCATGTA GATTAGGCAAACGTTCTTTACTCGAGCCTGTGCTTCTTCTGTTTTCATTA CCTACTCGAGTGCCATCATATGGACCTGCTCCTTAGGCTTCCACTTTGCG TCCGCGGGCTGGACCACGGTACAGTGTACCGCACCCCCTCTCTGCGCATA TTACATATCTTGTAAGAGCTCCACTTTGCCTGTCGAGGAATCTAGCTGGT ATGTGTGGATAAATAAAAAAAGACCTTACATATGCGGTTTGGCCTGGAGT AGTTAGGAACTTCTATCATCTGACCATGGGTATGAGCGACTGGACTAATC TGTGGGGGAACGGCTAGGTCACATTGTTTAGACATGACGTTAAATAGTCA TACTCCTATCTAGGCTAGTAGTGCAGTCATCCTCTACGCGTAGGTCCTTG GCAACGAATACCCGTCTGGAGCTATTGCCATGCTATGAACACTAGTCCGT TTCTAGCCCTGGGTCCGCTCTCGCTTGTTGCTCGTACGCAGGTACGCGAC GCATAGCTTTCGAAGTGTCGCTTTTCTTTTGTTAAATGCTCTAAATATGG TGAATGTAATAGTCGACACGATCGGTACTCATGTTGGCCTTTATGGAGGA GGACACCATCGGGCAACGAAGAGGGTGGTAAAAAGGGAAGAACTGCGGTG TCGTCCCGGTCTGATACGGGCGAAACCACGCTAAACATCGCGCTCTTACT CAATCGTCGCTCTACCCTGACCTGAGTCTTCGAACCATATTTTACAGTTT TTTTAGTTCGCTCTTTCTTCTCTCTCTCTCCCCCGTCGCATGCCCTCCCG GCGGCTGTGATTGGCGCGTTGCTGTTGTTCGGCTCGCTACCGCACAAGGT TCATCAACAAATTGTCTGATCAGGATCAGATGCAACTGGCCACAGCCAAC GACTCTGTTCACGCCAGCACCGAAAGGGTATGTGAGGACGTTTTTTTTAG ATTTTTTGTTTTCAAGGGTGGGCGAAGTACTAAAACGGTGAAGGGTTGCT CCCCACGCCATTTGCGTTGTTGTTGCGTTTGAACACGGTCACCGTCGTTT GTGTCTGGGCTGGTTTTAATTTTTTTTCTTGCTTACTTGCCCTCGGTGTA TAGTCGCAGTACAGTGGAGCCAAACTGCATGCATCAGCTAGCACCCCTAT GCAGAGACAGTATTGTTGAACAAGTTGCGGATGACATGAGTGCATGCAAC CAACCCCCGGAGGATGCACGCAAATCATCACCCGCGCCAAATCACTCCCT GCGTCGTCCGCACGTCGGGGCCACCGTTTAACGCTTCCTCCCTCGCTGTT GCCAAGGTCTTCTTGTTCAAGTTGTGGCGTCAATCGCGTCCCATCCGCTG TGCCATGTTTTGCAATCGCAGGCAACGTCCCTAGCATCCCTCTCTTTCTT GACTGGTGTAATACTCTTGCACCATTTGTGGGATCATCGGAGATTTTATA TTTTATACCGCACCCCCTCCAATATGCGCGCGCATTGCGACGACTTGGAT CGCGCGGCCGCAGGTGAAGGGTGTGACAAGTAACGTTCCCATGGCCCCAG CTGGGTCTGTTCAGACGGCAGCGAGTGGGAAAAGTTCCAGGGTGATGATG GCGCCGCCTCCACCAAGAGGGGTCGCCGACAAACGTTCGGGAGGTGATGG TAATCGAGGAGATAATTACGAGGATGGCAACGGCGACGGGCGGCGGACGG AAAGTAAACGGCGACGCAAGCACGAGAAGGAGAAGCACGCGGTCGTTTTG GACGAGATTGCGCCGAAGGAGACTGGCCGACAAGCGATTGCGGTGAGAGT TCTGATTTAGATTGCTTCATAGTAGGGCTACAGGTGGCTGCGACCATGCG GTCCACGCGTTTCCCCCACGCTCAACGGCCCGCTGCTCTCGCAACTAGGC AGGCACACTATTCGCGGAAGAGTGGTGAGCGCTTCCGATTATCTTTTAAA GGTATGTAGATGTTTCTCAGCCCCCCACCCCCACACACGTACCCTACCCG TTGCGGTCGGATTCTACCAGGATAAGAGGCGAGAGGTGGGTGCTCGTACA CACGCCGCGGCAAAGGAACGCGAAGATGCGGCTGATGGCCTGGACATGAG AGAGACTGACACGATGGGCGGCGGAGACAACTTCCAGGAGATGCTGGCTT TCTCCAAGAACAATAGGCAACGTCGAGAGACAGCGAAGGAGGTATGGCTG TGTTACTGCAGGTGTGCTCTCGTGTGTCTTGATTTTATTAGCGGAATTAT TTCTGTACCCCGTTTTTGCCCAAACGGCGTATCCCGTTAAGTTCAAGACC CCGTTTTGTCCTTTTGCATGCACATCCGTGGAGGTTGTTGCTTCTCTTCG ATAATTCGCCATCTCTATTTCTGTTATTGCTGTTGCTGCTGTTGCTGTTG CTGCTGTTGCTCCGTCGCTCTTTCTATATTTGACAGGAAAAACTGAGGTG TCTGGCAGCTAAAGAAGAAGAAAAACGGGCGGCGTTCCTAGCGCAGATGG GCCTGAAACCGGGTCAAAAAATAACCATACAACCGCGCCGAGACGCATGA AAGTTGGCCTATTGCAGTAGTGATGAACATCAGCCTATATGTTGTTCAGC GGTCTGGGATGAAATAGAGCGTTTTTGGCAGTTACGCTGCGTCCATTGGG CAGCATAACGATTTCAGGGTATGACCACGGGGGTTGTCGGAGAGGGGACT TGTGAGGACAACAGATAGTGTCAACTCTGCTAGACGTTTGTACATGTCTC GATGTAATGAACGGTGGACATAGCAAACTATCGCAATCGAAAAACCGATT ATGATGGTCCATTGCGACGCAATGTGTACACAATAGAGAGAGAAAGAGAA AGAGATGACGCGCTCACAGTTTCCCTTGGAGTAGTTGCCAGTTTCTGACT GATCGAAAATCCTTGGTTGCCAAATGACAACATCCAAGGCTATGGCGTCA TCATCGATTCGCGGTAATGTTTGTAGTCGATGGCGTGCTAAACTTAGCTC GAAATAAAACCGGCTCCACCAACGCA
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Coding sequence (CDS) from alignment at H-paniculata_contig7600:1024..5649-

>mRNA_H-paniculata_contig7600.15596.1 ID=mRNA_H-paniculata_contig7600.15596.1|Name=mRNA_H-paniculata_contig7600.15596.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1224bp|location=Sequence derived from alignment at H-paniculata_contig7600:1024..5649- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCAACTGGCCACAGCCAACGACTCTGTTCACGCCAGCACCGAAAGGAT
GCAACTGGCCACAGCCAACGACTCTGTTCACGCCAGCACCGAAAGGGTGA
AGGGTGTGACAAGTAACGTTCCCATGGCCCCAGCTGGGTCTGTTCAGACG
GCAGCGAGTGGGAAAAGTTCCAGGGTGATGATGGCGCCGCCTCCACCAAG
AGGGGTCGCCGACAAACGTTCGGGAGGTGATGGTAATCGAGGAGATAATT
ACGAGGATGGCAACGGCGACGGGCGGCGGACGGAAAGTAAACGGCGACGC
AAGCACGAGAAGGAGAAGCACGCGGTCGTTTTGGACGAGATTGCGCCGAA
GGAGACTGGCCGACAAGCGATTGCGGTGAAGGGTGTGACAAGTAACGTTC
CCATGGCCCCAGCTGGGTCTGTTCAGACGGCAGCGAGTGGGAAAAGTTCC
AGGGTGATGATGGCGCCGCCTCCACCAAGAGGGGTCGCCGACAAACGTTC
GGGAGGTGATGGTAATCGAGGAGATAATTACGAGGATGGCAACGGCGACG
GGCGGCGGACGGAAAGTAAACGGCGACGCAAGCACGAGAAGGAGAAGCAC
GCGGTCGTTTTGGACGAGATTGCGCCGAAGGAGACTGGCCGACAAGCGAT
TGCGGATAAGAGGCGAGAGGTGGGTGCTCGTACACACGCCGCGGCAAAGG
AACGCGAAGATGCGGCTGATGGCCTGGACATGAGAGAGACTGACACGATG
GGCGGCGGAGACAACTTCCAGGAGATGCTGGCTTTCTCCAAGAACAATAG
GCAACGTCGAGAGACAGCGAAGGAGGATAAGAGGCGAGAGGTGGGTGCTC
GTACACACGCCGCGGCAAAGGAACGCGAAGATGCGGCTGATGGCCTGGAC
ATGAGAGAGACTGACACGATGGGCGGCGGAGACAACTTCCAGGAGATGCT
GGCTTTCTCCAAGAACAATAGGCAACGTCGAGAGACAGCGAAGGAGGAAA
AACTGAGGTGTCTGGCAGCTAAAGAAGAAGAAAAACGGGCGGCGTTCCTA
GCGCAGATGGGCCTGAAACCGGGTCAAAAAATAACCATACAACCGCGCCG
AGACGCATGAGAAAAACTGAGGTGTCTGGCAGCTAAAGAAGAAGAAAAAC
GGGCGGCGTTCCTAGCGCAGATGGGCCTGAAACCGGGTCAAAAAATAACC
ATACAACCGCGCCGAGACGCATGA
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