mRNA_H-paniculata_contig7598.15589.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig7598.15589.1
Unique NamemRNA_H-paniculata_contig7598.15589.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig7598.15589.1 vs. uniprot
Match: A0A6H5KG06_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KG06_9PHAE)

HSP 1 Score: 613 bits (1582), Expect = 2.600e-207
Identity = 382/767 (49.80%), Postives = 478/767 (62.32%), Query Frame = 1
Query:    1 EHLYRNPRTEVQRLLDKYHANQYKVYNFASEPGRTYPAQLFHGRVERFPFADHTCPPLESVVDFCESAKAWLDTDEANVVSLHCKAGKGRAGIMAACLMVRMGETAEAALATFDATRVWDAKGLTVVNQRKWVFMYERLIKEIWGLQDSIGMVPGQDPDLRAPSPATICIREISVQMEPTTDGKQNINL-LTNLSCSLYQQKATGKVLVYSAKLVNGAPRDGEPGMVLAAALPRTAVLQGTFQVIFSAAAGATAIQKDLVDLWWNTTFVSREGGNQDFEVKDVDIFSSKLANRLQRAGARIVLFHTHPHAESPARRMPANS--SSCSGP----------------PDVDDSNSGQQVHSNEQQSGEEGQEQVLQDDAD-------RPFPSRTVPASDR---TSDPNGGMND-----NQNEIQPKG---AIGDVNTANISNTIP---LRGSEEETVAAGESDEFTLKHPPRRHPSGAEGQDASNLPRSPSLPGPSPAGWASPTWMFDGRLPSSSGPGPSSGTAVSNDANAALDWWKGKMW------SSGQTDEDEAPAEAEGVGGNTRSKNDRAAGSGVREKRHALMTEV----NSGATTSAPTATGGSTR-DR--LGRQPY-----ETESESDDQVAVRASGFASSAPAGYGGTGTVTASFSARSVQWVAEMEMAFEMERRRWEEHRSCLEAELDFALAARARAEARSEEDRARVDVLERRLTAWRSEHAMIEGDVKKAVRLLEMSLSGLVSAESALKRWKDHIPDK 2127
            EH+YRNPRTEVQRLL+KYH   YK+YNFA+EPGRTYP QLF GRVER+PF+DHTCPPLESVV+FCE+AKAWLD DE NVVSLHCKAGKGRAGIMAACL+VR+GETA  A++ FDATRV D KGLTVVNQRKW FMYERL+KE+WG++DSIGMVPGQDPDLRAP+    C+RE+S+Q +P   G +   + L NLSC++YQQ+  GK LV+  K+V  AP++GE G V AAALPR+AV+QGTFQV+ S A G +  QK+++D W NTTF++ EGG   F + ++D+   KLA RL +A A++V+ H HPHAESP RRMP  S  S  SGP                P    +  G    + E+ +G + Q ++ +DD +       R       P  DR    ++  GG        N+  +   G   + G V +AN   T       GS          D  +  + P    S    QD+   P SP LPGPSPAG  SP W F+GR PS+     +SG A+ +       W + KMW      SSG        A    V    + + +R A     ++RH+    +    NS  +T APT T  S R DR  L R+ +     ET+SESDDQ+AVRAS F      G G  G      S +  QW  EMEM F  ERRRWEEH+ CLE ELD+ALAARARAEARSEED ARV+VLE R++AWR E+++I  DVK+AVRLLEMSLSGL+SAE+AL  W+D IP K
Sbjct:   69 EHIYRNPRTEVQRLLEKYHRGHYKMYNFANEPGRTYPDQLFQGRVERYPFSDHTCPPLESVVNFCENAKAWLDMDENNVVSLHCKAGKGRAGIMAACLLVRLGETAAGAVSKFDATRVSDLKGLTVVNQRKWPFMYERLVKEVWGVRDSIGMVPGQDPDLRAPALRAACLREVSLQFQPPAAGSRKSGVFLPNLSCAIYQQQPMGKTLVHRTKMVQVAPQEGEVGTVYAAALPRSAVVQGTFQVLISGAVGVSRTQKNVIDFWSNTTFLTPEGGGHTFGLSEMDVSPPKLAERLHQAAAKLVVLHVHPHAESPRRRMPVKSRASPPSGPAVQQPVPATAAAEAAAPATAVNGEG----AREEATGTQQQPRLGEDDEELRSSVSGRSLLQAPAPEKDRGVGVANSVGGEGXXXXXXNETVLSSTGGGDSAGGVPSANPEETAAGEAADGSGTAVAVERHDDGGSSNNAPEVSASEPNNQDSLAEP-SPDLPGPSPAGMVSPVWTFEGRTPSNKV--EASGRAIGDSR-----WTQRKMWMSNQGTSSGGASTPTRNASLNAVAPEVKPRKERRA----LQRRHSGSRSMDSLGNSVGSTVAPTGTSSSMRGDRAALARKGFPAHRGETDSESDDQLAVRASAFGGRGGGGVGPAGPGMGPVSVQGEQWAMEMEMVFAQERRRWEEHQRCLETELDWALAARARAEARSEEDSARVEVLEGRVSAWRDEYSVIGRDVKQAVRLLEMSLSGLMSAETALNIWRDDIPSK 819          
BLAST of mRNA_H-paniculata_contig7598.15589.1 vs. uniprot
Match: D7FKS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKS4_ECTSI)

HSP 1 Score: 325 bits (834), Expect = 7.240e-95
Identity = 171/315 (54.29%), Postives = 223/315 (70.79%), Query Frame = 1
Query:    7 LYRNPRTEVQRLLDKYHANQYKVYNFASEPGR-TYPAQLFHGRVERFPFADHTCPPLESVVDFCESAKAWLDTDEANVVSLHCKAGKGRAGIMAACLMVRMGETAEAALATFDATRVWDAKGLTVVNQRKWVFMYERLIKEIWGLQDSIGMVPGQDPDLRAPSPATICIREISVQMEPTTDGKQNINLLTNLSCSLYQQKATGKVLVYSAKLVNGAPRD-GEPGMVLAAALPRTAVLQGTFQVIFSAAAGATAIQKDLVDLWWNTTFVSREGGNQDFEVKDVDIFSSKLANRLQRAGARIVLFHTHPHAESPARR 945
            LY +PRTEV+RLLDKYH ++YKVYNFASE  + T P      RVER+PF D TCPPLESVVDFCE+AKAWLD  + NVVSLHCKAGKGRAGIMAACLMVRMGETA+AA+A +DAT+    K   V N R WVF+YERLI+E+WGL+++IG V GQ+P L+AP      IR++S+Q++     ++   +L + SC++YQQ   GK LV+ A++ + +PR  G+   V AAALPR+ V++GTFQV+ SAA G   + K+++D+W NTTF+  +GG + F   + D+    LA RL  A   +VL HT P A SP  R
Sbjct:  100 LYEDPRTEVRRLLDKYHCDRYKVYNFASELAQMTPPTHRMDTRVERYPFTDDTCPPLESVVDFCENAKAWLDAHDDNVVSLHCKAGKGRAGIMAACLMVRMGETAQAAVARYDATQGAAIKRAGV-NHRAWVFLYERLIREVWGLRETIGTVSGQNPGLKAPPRLATSIRDVSLQLKVPPRQRRWKQILHHPSCAVYQQTPAGKALVHRARMPSVSPRKRGQENSVFAAALPRSVVVEGTFQVVVSAATGLFGMAKNVLDVWCNTTFLEEDGGRELFTFTENDLPPGPLAKRLLAANVSVVLTHTPPDAPSPDHR 413          
BLAST of mRNA_H-paniculata_contig7598.15589.1 vs. uniprot
Match: A0A6H5KRR3_9PHAE (Phosphatase tensin-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRR3_9PHAE)

HSP 1 Score: 266 bits (680), Expect = 2.920e-73
Identity = 157/332 (47.29%), Postives = 201/332 (60.54%), Query Frame = 1
Query:    7 LYRNPRTEVQRLLDKYHANQYKVYNFASEPGR-TYPAQLFHGRVERFPFADHTCPPLESVVDFCESAKAWLDTDEANVVSLHCKAGKGRAGIMAACLMVRMGETAEAALATFDATRVWDAKGLTVVNQRKWVFMYERLIKEIWGLQDSIGMVPGQDPDLRAPSPATICIREISVQMEPTTDGKQNINLLTNLSCSLYQQKATGKVLVYSAKLVNGAPRDG----EPGM--------VLAAALPRTAVL-----QGTF-QVIFSAAAGATAIQKDLVDLWWNTTFVSREGGNQDFEVKDVDIFSSKLANRLQRAGARIVLFHTHPHAESPARR 945
            LY +PRTEV+RLLDKYH ++YKVYNFASE  + T P      RVER+PF D TCPPLESVVDFCE+AKAWLD  + NVVSLHCKAGKGRAGIMAACLMVRMGETA+AA+A +D        G   VN R WVF+YERLI+E+WGL+++IG V GQ+P L+AP      IR++S+Q++     ++   +L N+              +  A  ++  PR      EPG         V      R   L     +G F QV+ SAA G   + K+++D+W NTTF+  +GG + F   + D+    LA RL  A   +VL HT P A SP  R
Sbjct:   97 LYEDPRTEVRRLLDKYHCDRYKVYNFASELAQMTPPTHRMETRVERYPFTDDTCPPLESVVDFCENAKAWLDAHDDNVVSLHCKAGKGRAGIMAACLMVRMGETAQAAVARYDTGAAIKRAG---VNHRAWVFLYERLIREVWGLRETIGTVSGQNPGLKAPPRLATSIRDVSLQLKVPPRQRRWKQILANI--------------IRRAPYISRRPRARRWCTEPGCLPFRRGNGVRRTRFSRLLFLAASSWRGPFRQVVVSAATGLFGMAKNVLDVWCNTTFLEEDGGRELFTFTENDLPPGPLAKRLLAATVSVVLTHTPPDAPSPDHR 411          
BLAST of mRNA_H-paniculata_contig7598.15589.1 vs. uniprot
Match: A0A482SV29_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SV29_9ARCH)

HSP 1 Score: 174 bits (441), Expect = 6.470e-44
Identity = 107/287 (37.28%), Postives = 155/287 (54.01%), Query Frame = 1
Query:    1 EHLYRNPRTEVQRLLDKYHANQYKVYNFASEPGRTYPAQLFHGRVERFPFADHTCPPLESVVDFCESAKAWLDTDEANVVSLHCKAGKGRAGIMAACLMVRMGETAEA--ALATFDATRVWDAKGLTVVNQRKWVFMYERLIKEIWGLQDSIGMVPGQDPD-LRAPSPATICIREISVQMEPTTDGKQNINLLTNLSCSLYQQKATGKVLVYSAKLVNGAPRDGEPGMVLAAALPRTAVLQGTFQVIFSAAAGATAIQKDLVDLWWNTTFVSREGGNQDFEVKDVDI 852
            EH+YRNPR E++R +DK+H   YK++NF  E GR Y   +F+GRVER+PF DH  PPLE++V F  SA+AWL+ D  +VV++HCKAGKGRAG+M   L+VR G    A  A+  +D  RV + +GLTV +QRK+V  YE L +++WG+  +IG V     + L  P   T  I  + V   P+     +  ++T+   +   QK      ++    + GA          A      A ++G F+V               V+L  NT F++R     DF V  +DI
Sbjct:   74 EHIYRNPRYEIRRFMDKFHHENYKMFNFCCEYGRGYHPDIFYGRVERYPFKDHNTPPLETMVAFANSAQAWLEEDPEHVVNMHCKAGKGRAGLMCCVLLVRTGAAQSAIDAMDLYDRERVTNNRGLTVTSQRKFVIFYETLWRQVWGVTGNIGDVSAAAAEKLMIPEQPTYHINRVEVMNVPS-GFVHSYRVVTSSITNFGAQK------LHETGWLTGANN--------AITCACDASVKGNFKVFVYFRKSGWGGGVRFVELQHNTFFIARGVNYFDFAVDQLDI 345          
BLAST of mRNA_H-paniculata_contig7598.15589.1 vs. uniprot
Match: A0A7S1TW21_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TW21_9STRA)

HSP 1 Score: 171 bits (433), Expect = 4.010e-43
Identity = 112/307 (36.48%), Postives = 162/307 (52.77%), Query Frame = 1
Query:    1 EHLYRNPRTEVQRLLDKYHANQYKVYNFASEPGRTYPAQLFHGRVERFPFADHTCPPLESVVDFCESAKAWLDTDEANVVSLHCKAGKGRAGIMAACLMVRMGE--TAEAALATFDATRVWDAKGLTVVNQRKWVFMYERLIKEIWGLQDSIGMVPG-QDPDLRAPSPATICIREISVQME-PTTDGKQNINLLTNLSCSLYQQKATGKVLVYSAKLVNGAPRDGEPGMVLAAALPRTAVLQGTFQVIFSAAAGATAIQKDLVDLWWNTTFVSREGGNQDFEVKDVDIFSSKLANRLQRAGARIVLF 909
            EH +RNPR E++R L+  HA  Y++YNF  EPGR+Y   +F GRVER+PF DH+ PPLE++V F ESAKAWLD D ANVV++HCKAGKGRAG+M+  L+ R G+  +   A   +DATRV + +GLTV +Q+++   YERL +E W    S+    G  +   + P    I I  I V    P  +GK    ++      L  +  T +V   S     GA         L    PR  ++Q  F V  S         K + ++W NT F+    G    E++  ++ + +   R      R+ ++
Sbjct:   74 EHFFRNPRYELRRFLETKHAGHYRMYNFCCEPGRSYDPAVFEGRVERYPFRDHSVPPLEAIVAFNESAKAWLDADPANVVNVHCKAGKGRAGLMSIMLLFRNGDFDSIIEAREHYDATRVSNGRGLTVPSQQRYAHYYERLWRETWKYAGSMADAQGGHELTKKLPDQPRIYISAIEVVSPGPWYEGKSLEYIV------LRAEHNTPEVQWRS-----GAAEQ------LKWDFPRGLMVQRNFCVKVSTPKSCCKKAKRVFEVWQNTAFLEVAPGTNYIEIRRSEVDTKRKIARKMNDDFRLRIY 363          
BLAST of mRNA_H-paniculata_contig7598.15589.1 vs. uniprot
Match: A0A3R7KLC8_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KLC8_9STRA)

HSP 1 Score: 159 bits (402), Expect = 1.010e-39
Identity = 78/141 (55.32%), Postives = 101/141 (71.63%), Query Frame = 1
Query:    1 EHLYRNPRTEVQRLLDKYHANQYKVYNFASEPGRTYPAQLFHGRVERFPFADHTCPPLESVVDFCESAKAWLDTDEANVVSLHCKAGKGRAGIMAACLMVRMGETAEA--ALATFDATRVWDAKGLTVVNQRKWVFMYERL 417
            E L+RNPR+EVQ  LD+ HA+ Y V+NF  EP R YP  +F G+VERFP  DH  P L+ ++ FCE A AWL+ DE +VV+LHCKAGKGRAG+MA  L++RMG +A A  A+  ++  RV D +GLTVV+Q+KWV  Y  L
Sbjct:   53 EFLFRNPRSEVQEFLDERHADNYFVFNFCDEPKRGYPPSVFEGQVERFPIEDHNVPSLQMMMTFCEKATAWLNADEKHVVALHCKAGKGRAGMMACMLLLRMGFSASATDAIDRYNHERVRDRRGLTVVSQKKWVHYYAAL 193          
BLAST of mRNA_H-paniculata_contig7598.15589.1 vs. uniprot
Match: A0A225X3A4_9STRA (Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X3A4_9STRA)

HSP 1 Score: 155 bits (392), Expect = 2.630e-38
Identity = 81/157 (51.59%), Postives = 104/157 (66.24%), Query Frame = 1
Query:    1 EHLYRNPRTEVQRLLDKYHANQYKVYNFASEPGRTYPAQLFHGRVERFPFADHTCPPLESV-----VDFCESAKAWLDTDEANVVSLHCKAGKGRAGIMAACLMVRMGETAEA--ALATFDATRVWDAKGLTVVNQRKWVFMYERLIKEIWGLQDSI 450
            E L+RNPR+EVQ+ LDK HA  Y VYNF  EP R YPA +F GRV+ FP  DH  P  + +     + FCE A +WLD +E +VV+LHCKAGKGRAG+MA  L++RMG  A A  A+  ++  RV D +GLTVV+Q+KWV  Y  L  +   L+ SI
Sbjct:   53 EFLFRNPRSEVQQFLDKRHAGDYFVYNFCDEPNRCYPASIFDGRVKHFPIEDHNIPTFQLMYVQRRMTFCEEAASWLDANEKHVVALHCKAGKGRAGMMACMLLLRMGFAASATEAIDRYNRERVNDRRGLTVVSQKKWVNYYADLSIQTSALEQSI 209          
BLAST of mRNA_H-paniculata_contig7598.15589.1 vs. uniprot
Match: A0A2D4BJ70_PYTIN (Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase, putative n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJ70_PYTIN)

HSP 1 Score: 154 bits (390), Expect = 8.740e-38
Identity = 106/273 (38.83%), Postives = 143/273 (52.38%), Query Frame = 1
Query:    1 EHLYRNPRTEVQRLLDKYHANQYKVYNFASEPGRTYPAQLFHGRVERFPFADHTCPPLESVVDFCESAKAWLDTDEANVVSLHCKAGKGRAGIMAACLMVRM--GETAEAALATFDATRVWDAKGLTVVNQRKWVFMYERLIKEIWGLQDSIGMVPGQDPDLRAPSPATICIREISVQMEPTTDGKQNINLLTNLSCSLYQQKATGKVLVYSAKLVNGAPRDGEPGMVLAAALPRTAVLQGTFQVIFSAAAGATAIQKDLVDLWWNTTFVSRE 813
            E  YRNPR+ VQR L + HA++YKV+NF SE  R Y  + F  RVE  P  DH  P    ++ FCE A  WLD D  NVV LHCKAGKGRAG+MA  L++RM    TA  A+  ++  RV D +GLTV++QRKWV  YE+L+ ++  L+  +G    +DP      P  + I E+ +Q  PT  GK    L   L        +T KVL+      +G  R           L  T V QG  Q+ F +      + K    +W+NT F+  +
Sbjct:   61 EATYRNPRSAVQRFLMERHASRYKVFNFCSESSRRYSPETFESRVEFIPIEDHNVPTFPQILSFCERAAQWLDDDSENVVVLHCKAGKGRAGMMACMLLLRMRFASTAAEAIDRYNRERVVDRRGLTVISQRKWVQYYEQLLNQL-RLKSPLGQ---RDPHDAVSEPELV-IEELRIQNGPT--GKSPPML--RLRIFTLDNASTKKVLLNQT---SGMDRF----------LVHTRV-QGCVQLEFRSVKCHECMVKKHFRVWFNTMFIDEK 310          
BLAST of mRNA_H-paniculata_contig7598.15589.1 vs. uniprot
Match: D0MXB2_PHYIT (Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MXB2_PHYIT)

HSP 1 Score: 152 bits (383), Expect = 3.960e-37
Identity = 72/144 (50.00%), Postives = 103/144 (71.53%), Query Frame = 1
Query:    1 EHLYRNPRTEVQRLLDKYHANQYKVYNFASEPGRTYPAQLFHGRVERFPFADHTCPPLESVVDFCESAKAWLDTDEANVVSLHCKAGKGRAGIMAACLMVRMGETAEA--ALATFDATRVWDAKGLTVVNQRKWVFMYERLIKE 426
            E L+RNPR+EVQ+LL++ H+  Y VYNF  E  R+YP+ +F+GRV+ +P  DH  P  + ++ FC+ A AWLD +E ++V+LHCKAGKGRAG+MA  L++RMG  A A  A+  ++  RV D +GLTVV+Q+KWV  Y  L+ +
Sbjct:   53 EFLFRNPRSEVQQLLEERHSGHYFVYNFCDECKRSYPSSIFNGRVKNYPIEDHNVPTFQMMMAFCDEAAAWLDANEKHIVALHCKAGKGRAGMMACMLLLRMGFAASANDAIDRYNRERVNDRRGLTVVSQKKWVNYYAALLAQ 196          
BLAST of mRNA_H-paniculata_contig7598.15589.1 vs. uniprot
Match: W2QZR0_PHYPN (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=W2QZR0_PHYPN)

HSP 1 Score: 152 bits (383), Expect = 6.270e-37
Identity = 73/144 (50.69%), Postives = 101/144 (70.14%), Query Frame = 1
Query:    1 EHLYRNPRTEVQRLLDKYHANQYKVYNFASEPGRTYPAQLFHGRVERFPFADHTCPPLESVVDFCESAKAWLDTDEANVVSLHCKAGKGRAGIMAACLMVRMGETAEA--ALATFDATRVWDAKGLTVVNQRKWVFMYERLIKE 426
            E L+RNPR+EVQ+ L++ H   Y VYNF   P R+YP  +F GRV+ +P  DH  P L+ ++ FC+ A AWLD +E +VV+LHCKAGKGRAG+MA  L++RMG +A A  A+  ++  RV D +GLTVV+Q+KWV  Y  L+ +
Sbjct:   53 ELLFRNPRSEVQQFLEERHGGDYFVYNFCDGPNRSYPPSIFDGRVKNYPIEDHNVPTLQMMMAFCDEAAAWLDANEKHVVALHCKAGKGRAGMMACMLLLRMGFSASATDAIDRYNRERVNDRRGLTVVSQKKWVNYYAALLAQ 196          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7598.15589.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KG06_9PHAE2.600e-20749.80Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FKS4_ECTSI7.240e-9554.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRR3_9PHAE2.920e-7347.29Phosphatase tensin-type domain-containing protein ... [more]
A0A482SV29_9ARCH6.470e-4437.28Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S1TW21_9STRA4.010e-4336.48Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A3R7KLC8_9STRA1.010e-3955.32Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
A0A225X3A4_9STRA2.630e-3851.59Phosphatidylinositol-3,4,5-trisphosphate 3-phospha... [more]
A0A2D4BJ70_PYTIN8.740e-3838.83Phosphatidylinositol-3,4,5-trisphosphate 3-phospha... [more]
D0MXB2_PHYIT3.960e-3750.00Phosphatidylinositol-3,4,5-trisphosphate 3-phospha... [more]
W2QZR0_PHYPN6.270e-3750.69Uncharacterized protein n=14 Tax=Phytophthora TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7598contigH-paniculata_contig7598:2969..10545 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score604.0
Seed ortholog evalue9.1e-170
Seed eggNOG ortholog2880.D7FKS3
KEGG rclassRC00078
KEGG koko:K01110,ko:K03065
KEGG ReactionR03363,R04513
KEGG Pathwayko00562,ko01521,ko03050,ko04068,ko04070,ko04071,ko04115,ko04140,ko04150,ko04151,ko04212,ko04218,ko04510,ko04931,ko05161,ko05165,ko05169,ko05200,ko05206,ko05213,ko05214,ko05215,ko05218,ko05222,ko05224,ko05225,ko05230,map00562,map01521,map03050,map04068,map04070,map04071,map04115,map04140,map04150,map04151,map04212,map04218,map04510,map04931,map05161,map05165,map05169,map05200,map05206,map05213,map05214,map05215,map05218,map05222,map05224,map05225,map05230
KEGG ModuleM00341
Hectar predicted targeting categoryother localisation
GOsGO:0000278,GO:0000281,GO:0000910,GO:0001931,GO:0001932,GO:0001933,GO:0002119,GO:0002164,GO:0003008,GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0005488,GO:0005515,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005886,GO:0005938,GO:0006464,GO:0006469,GO:0006470,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0006807,GO:0006928,GO:0006935,GO:0006950,GO:0006970,GO:0006996,GO:0007010,GO:0007015,GO:0007049,GO:0007154,GO:0007163,GO:0007165,GO:0007186,GO:0007187,GO:0007188,GO:0007275,GO:0007568,GO:0007610,GO:0007611,GO:0007635,GO:0008104,GO:0008150,GO:0008152,GO:0008154,GO:0008289,GO:0008340,GO:0009266,GO:0009267,GO:0009408,GO:0009605,GO:0009628,GO:0009651,GO:0009791,GO:0009892,GO:0009898,GO:0009987,GO:0009991,GO:0010259,GO:0010563,GO:0010605,GO:0014065,GO:0016020,GO:0016043,GO:0016311,GO:0016314,GO:0016787,GO:0016788,GO:0016791,GO:0019220,GO:0019222,GO:0019538,GO:0019637,GO:0022402,GO:0022603,GO:0022604,GO:0022607,GO:0023052,GO:0030010,GO:0030029,GO:0030030,GO:0030031,GO:0030036,GO:0030041,GO:0030258,GO:0030424,GO:0030425,GO:0030587,GO:0031152,GO:0031254,GO:0031257,GO:0031268,GO:0031269,GO:0031272,GO:0031279,GO:0031323,GO:0031324,GO:0031344,GO:0031399,GO:0031400,GO:0031667,GO:0031668,GO:0031669,GO:0032101,GO:0032103,GO:0032153,GO:0032155,GO:0032268,GO:0032269,GO:0032386,GO:0032388,GO:0032501,GO:0032502,GO:0032796,GO:0032879,GO:0032880,GO:0033036,GO:0033157,GO:0033554,GO:0033673,GO:0034461,GO:0034485,GO:0034593,GO:0034594,GO:0034595,GO:0034613,GO:0034622,GO:0035335,GO:0035556,GO:0036051,GO:0036052,GO:0036211,GO:0036477,GO:0040011,GO:0040012,GO:0040017,GO:0040024,GO:0042221,GO:0042306,GO:0042307,GO:0042325,GO:0042326,GO:0042330,GO:0042578,GO:0042594,GO:0042995,GO:0043005,GO:0043025,GO:0043086,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043327,GO:0043412,GO:0043549,GO:0043933,GO:0044085,GO:0044087,GO:0044092,GO:0044237,GO:0044238,GO:0044255,GO:0044260,GO:0044267,GO:0044297,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044459,GO:0044463,GO:0044464,GO:0044764,GO:0045761,GO:0045859,GO:0045936,GO:0046486,GO:0046488,GO:0046822,GO:0046824,GO:0046839,GO:0046856,GO:0048015,GO:0048017,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048580,GO:0048582,GO:0048583,GO:0048584,GO:0048856,GO:0048870,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050877,GO:0050890,GO:0050896,GO:0050919,GO:0050920,GO:0050921,GO:0050926,GO:0050927,GO:0051049,GO:0051050,GO:0051094,GO:0051128,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051258,GO:0051270,GO:0051272,GO:0051285,GO:0051286,GO:0051301,GO:0051338,GO:0051339,GO:0051348,GO:0051641,GO:0051674,GO:0051703,GO:0051704,GO:0051716,GO:0051800,GO:0052866,GO:0060255,GO:0060341,GO:0060491,GO:0061062,GO:0061063,GO:0061065,GO:0061066,GO:0061640,GO:0065003,GO:0065007,GO:0065009,GO:0070201,GO:0070300,GO:0070727,GO:0071496,GO:0071704,GO:0071840,GO:0071900,GO:0071901,GO:0071944,GO:0080090,GO:0090087,GO:0090316,GO:0090702,GO:0097435,GO:0097447,GO:0097458,GO:0098552,GO:0098562,GO:0098630,GO:0098743,GO:0099120,GO:0099568,GO:0099738,GO:0106017,GO:0120025,GO:0120031,GO:0120032,GO:0120035,GO:0120036,GO:0120038,GO:0140096,GO:1900180,GO:1900182,GO:1901564,GO:1902074,GO:1903047,GO:1903827,GO:1903829,GO:1904589,GO:1904591,GO:1904951,GO:1990753,GO:2000026
EggNOG free text desc.phosphatase
EggNOG OGsCOG2453@1,KOG2283@2759
Ec32 ortholog descriptionProtein-tyrosine phosphatase-like
Ec32 orthologEc-21_001920.1
EC3.1.3.16,3.1.3.48,3.1.3.67
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01009,ko03051
Exons11
Model size2127
Cds size2127
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930935.8786793-CDS-H-paniculata_contig7598:2968..30851622930935.8786793-CDS-H-paniculata_contig7598:2968..3085Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7598 2969..3085 -
1691481517.9845297-CDS-H-paniculata_contig7598:2968..30851691481517.9845297-CDS-H-paniculata_contig7598:2968..3085Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7598 2969..3085 -
1622930935.893654-CDS-H-paniculata_contig7598:3615..36691622930935.893654-CDS-H-paniculata_contig7598:3615..3669Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7598 3616..3669 -
1691481517.9997633-CDS-H-paniculata_contig7598:3615..36691691481517.9997633-CDS-H-paniculata_contig7598:3615..3669Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7598 3616..3669 -
1622930935.9092336-CDS-H-paniculata_contig7598:4225..43011622930935.9092336-CDS-H-paniculata_contig7598:4225..4301Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7598 4226..4301 -
1691481518.009833-CDS-H-paniculata_contig7598:4225..43011691481518.009833-CDS-H-paniculata_contig7598:4225..4301Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7598 4226..4301 -
1622930935.9232843-CDS-H-paniculata_contig7598:4788..48881622930935.9232843-CDS-H-paniculata_contig7598:4788..4888Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7598 4789..4888 -
1691481518.019926-CDS-H-paniculata_contig7598:4788..48881691481518.019926-CDS-H-paniculata_contig7598:4788..4888Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7598 4789..4888 -
1622930935.938795-CDS-H-paniculata_contig7598:4936..59021622930935.938795-CDS-H-paniculata_contig7598:4936..5902Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7598 4937..5902 -
1691481518.0295432-CDS-H-paniculata_contig7598:4936..59021691481518.0295432-CDS-H-paniculata_contig7598:4936..5902Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7598 4937..5902 -
1622930935.9536848-CDS-H-paniculata_contig7598:6759..68471622930935.9536848-CDS-H-paniculata_contig7598:6759..6847Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7598 6760..6847 -
1691481518.039124-CDS-H-paniculata_contig7598:6759..68471691481518.039124-CDS-H-paniculata_contig7598:6759..6847Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7598 6760..6847 -
1622930935.9749413-CDS-H-paniculata_contig7598:7311..74671622930935.9749413-CDS-H-paniculata_contig7598:7311..7467Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7598 7312..7467 -
1691481518.0489182-CDS-H-paniculata_contig7598:7311..74671691481518.0489182-CDS-H-paniculata_contig7598:7311..7467Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7598 7312..7467 -
1622930935.9920857-CDS-H-paniculata_contig7598:7840..79841622930935.9920857-CDS-H-paniculata_contig7598:7840..7984Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7598 7841..7984 -
1691481518.0596416-CDS-H-paniculata_contig7598:7840..79841691481518.0596416-CDS-H-paniculata_contig7598:7840..7984Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7598 7841..7984 -
1622930936.0061374-CDS-H-paniculata_contig7598:8406..84871622930936.0061374-CDS-H-paniculata_contig7598:8406..8487Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7598 8407..8487 -
1691481518.0674186-CDS-H-paniculata_contig7598:8406..84871691481518.0674186-CDS-H-paniculata_contig7598:8406..8487Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7598 8407..8487 -
1622930936.0343688-CDS-H-paniculata_contig7598:9541..97461622930936.0343688-CDS-H-paniculata_contig7598:9541..9746Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7598 9542..9746 -
1691481518.0762775-CDS-H-paniculata_contig7598:9541..97461691481518.0762775-CDS-H-paniculata_contig7598:9541..9746Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7598 9542..9746 -
1622930936.0500379-CDS-H-paniculata_contig7598:10405..105451622930936.0500379-CDS-H-paniculata_contig7598:10405..10545Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7598 10406..10545 -
1691481518.0841396-CDS-H-paniculata_contig7598:10405..105451691481518.0841396-CDS-H-paniculata_contig7598:10405..10545Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7598 10406..10545 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7598.15589.1prot_H-paniculata_contig7598.15589.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig7598 2969..10545 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig7598.15589.1

>prot_H-paniculata_contig7598.15589.1 ID=prot_H-paniculata_contig7598.15589.1|Name=mRNA_H-paniculata_contig7598.15589.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=709bp
EHLYRNPRTEVQRLLDKYHANQYKVYNFASEPGRTYPAQLFHGRVERFPF
ADHTCPPLESVVDFCESAKAWLDTDEANVVSLHCKAGKGRAGIMAACLMV
RMGETAEAALATFDATRVWDAKGLTVVNQRKWVFMYERLIKEIWGLQDSI
GMVPGQDPDLRAPSPATICIREISVQMEPTTDGKQNINLLTNLSCSLYQQ
KATGKVLVYSAKLVNGAPRDGEPGMVLAAALPRTAVLQGTFQVIFSAAAG
ATAIQKDLVDLWWNTTFVSREGGNQDFEVKDVDIFSSKLANRLQRAGARI
VLFHTHPHAESPARRMPANSSSCSGPPDVDDSNSGQQVHSNEQQSGEEGQ
EQVLQDDADRPFPSRTVPASDRTSDPNGGMNDNQNEIQPKGAIGDVNTAN
ISNTIPLRGSEEETVAAGESDEFTLKHPPRRHPSGAEGQDASNLPRSPSL
PGPSPAGWASPTWMFDGRLPSSSGPGPSSGTAVSNDANAALDWWKGKMWS
SGQTDEDEAPAEAEGVGGNTRSKNDRAAGSGVREKRHALMTEVNSGATTS
APTATGGSTRDRLGRQPYETESESDDQVAVRASGFASSAPAGYGGTGTVT
ASFSARSVQWVAEMEMAFEMERRRWEEHRSCLEAELDFALAARARAEARS
EEDRARVDVLERRLTAWRSEHAMIEGDVKKAVRLLEMSLSGLVSAESALK
RWKDHIPDK
back to top

mRNA from alignment at H-paniculata_contig7598:2969..10545-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig7598.15589.1 ID=mRNA_H-paniculata_contig7598.15589.1|Name=mRNA_H-paniculata_contig7598.15589.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7577bp|location=Sequence derived from alignment at H-paniculata_contig7598:2969..10545- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAGCACCTTTACCGGAACCCTCGCACCGAGGTCCAGCGATTGCTGGACAA GTACCACGCCAATCAGTACAAAGTGTACAATTTCGCAAGCGAGCCTGGGC GGACCTATCCAGCCCAGCTGTTTCATGGGCGTGTCGAGAGGTATGATGTT GTCATGCCACGAAATTGATGCGTGTGGGAACAGACGATTTAGTAGCAGGG TTATGTTTTTTAGCTTGTACTATCACTATCGACCCCCCCCCTCCCCTCCC CTTGTCATGGTAGTTTATCACTATTGATTGTAGTATCATTGCAATGCCAG GCTACTCGGCAGATCAGCACTTAAAAATCGAGTTGATCGCACACTGATTA TACTCATTTCTCCAAAGATGGTTGTCACCACGTGCTGTTGTACTGTACCT TGAACTATGTAACCGCAAGAGTTGAGTTTTAGACCATGCGCGTAGAGTGT CCAAAGGTGATGGATGCCTTGGACCATACCGCAGAGCGGGCCCAAGCGCA ATCAGTTTGCCCGAAAAACGACAACAAGAAAAAACACAAGACGTTGAAGA CCTTGCCTTTCCACCAATCGTTGTAGGTCACGATCATTTCTTCGGTGTTG ACGAGGTCCGTTCGAAAGTTCATGTCTCCGCTGTCGACATAGTAATAAGG TCGCTTTGTGCGTTTCGAAGGTGTTTTTTGTTTTCATGTTGATCAATTAT ATTGTACTTACTAGTGGTGAAAGGTTTGTTTGGGCTTAACCTTGGCCATA GCCGCAATGAAGTCTAATATATGTATATATATATATATATACCGAACAGG TTTCCTTTTGCCGATCACACGTGCCCACCTTTGGAATCCGTGGTGGATTT CTGTGAGAGTGCCAAGGCATGGTTGGATACTGACGAGGCCAACGTGGTGT CGCTTCACTGCAAGGCCGGGAAGGGGAGAGCGGGGATCATGGCGGCGTGT CTCATGGTACGGATGGGAGAGACGGCAGAAGCGGCCCTGGCGACGTTTGA TGCGGTAAGTGACTGTAAACGTATCGGATCCGTGGTTGTAAACAAGTTGA ACCCGGCAAAAAAGTAACAAAAAGGCACGTGGCAAAACGGGGTCCATTTT TTGGGGATGGGGGTACAGTTATCATGGATTCAATATGGAAAAGCTCAAAA TATGGAACGGGAAAATACCTGTACAGTGCACAAGTAGGGATTGGTTCGCG AGAGCGCTACTCTGTGTGGTATCATTCATTATGTATATCATCCACTGACA TTGCAACCGTCTCGAAATCGAGTAATTATGCCCTGGGTAGAATTGACTGT GATACTCCCCATTCAATGCATTGCAACGCTTGCGAGGTCGATGGAATATC GACCGTCCGACCGTCGGGGCCAGTTTTTCTCTTGTTGCTAGAAATGAACA CACATCCAGCGACAGTCGGGCATACTCGAGCTGGCTAAGATCGAGGGCGA CTGATATACAGGGCATGCGCTTAACTGAACTGTGGCAGTACCGTACAGTA CTGTCTGTAGTGTCTGTTGTCTGTTACAATGATGCTGCAATGCCGAAAAA GGGAAGTTGCAATCCCTTTTTATGTTGGAGATGAAGTTTCGTTGATGATG GGCATTCGGCGCACACATAATTGACACTCTCGGGACTCTCCTTGCATGTA CATATCTGTACTGTGGCGAATAAAGAGATGTCATCGACTCTTTGCGTGTG TACTTCTGTACTGTGACGCACGCCCTGCATCCCTCATACTGGTGGAAACA CAAGATTTCCTGAGCGATAGAGACAGTCTGCCACATTTATGAGTGACTTT TGACCCCTTCAACATCTTTTTTTAAGAGGATCGAGGGCACAGGGGATGTA GGAGGTTCCTGCTGGCAGATTGTTCGTGCTTGGGTGCTTTTTTTCGCATC CTCCTATTGGGTATAACGGTCCATATTAAAAATAATACAAAAATTTAGCT GGCCCTCCACAGCTGATGAAGTCCTCAGACGTTCCTAGAGGGTTAACCTT GCCCCCCTTCTCCCCCCTTCTCCCCCTGCCCTGCCCTACATGACGCTTTT CTGAGCAGACGAGAGTTTGGGACGCAAAGGGGCTGACGGTCGTCAATCAG CGGAAATGGGTTTTCATGTACGAGAGGCTCATCAAGGAGGTGAGCTAGCT TCCTCCGAGAAGTACCTACCAACCTTTCCCTGTCGCGTGGACATTCAGTG CATGTGTTACCCTCTTCGTCAGCTTTCCTCGTGCTGAACACGATCCGTAC ATACATGTATAAATTGCTAGTTTGGTGGTTAATGACGACTGGCAGACAGC AAAATCGTGGTTGCGATTTGTCTTTCGTACGAGGCTTTTTCAAGTGTCGT ATAAGGTAGATTATATATCTTGCTTGTTTTCTCCAGTGTTAATACTATAC CAGGCTCTCTGATTGGGTTTGGAACATTGCGAGGTGACATTTAAATCCGA TTTATATTTGAGGTATTGTACACCTGAATTTAATTCCTACACCTTGTTGA GCGTTTGCACTGCTTCAGTTTCTCGTCGCCACTTGCACTCACCCGCTTCC ACACACGCCAGATATGGGGACTGCAAGACAGCATTGGCATGGTTCCGGGG CAGGACCCTGATCTAAGGGCACCGTCTCCAGCGACAATATGCATTCGCGA AATTTCCGTGCAAATGGAACCTACCACGGACGGAAAGCAAAATATCAACC TGTTGGTAAGAGCGAATGGTTATTGCTGTGATTGACTTTTGGACATATGG TGTGATAGGCCTCCTTGCTTTGTACATAAAGGTACAGTGGAAGGTAAGTT AGTGGCGCGTTTGTGGAATTTGGTGCAAAGCAGGTTGTGACATGACACTA GTACGTTATTCTTTTTGTCACCTTGTTTTACGATTTTTCTTGTTTTTATG GCGGCGAGCAGGACATCACGATGACGATGCCAAGTGCAGGATATTCGTTT GTTCATGCCACTAGTGGATTTCGTGACCAAATATCGCCACTTATTTTTTC TTTTTTTCGTACGCTCTTCCCCCCGTACCTCGTGTGGACGTCTATCACAC CGTGTCCTCGCTTGGTTACGGGAAATAGACGAACCTGTCCTGCTCCTTGT ATCAGCAGAAGGCCACGGGCAAGGTGCTTGTATATAGCGCGAAGTTAGTC AATGGAGCGCCTCGCGACGGGGAACCGGGGATGGTCTTGGCGGCAGCTCT GCCCCGCACAGCTGTGCTACAGGGGACATTTCAGGTAACCTACAGCAAAA GTAGCGCAGTAGCTTTAGTGTTGAATGGGTTGAAACCGTCGTAGCAGTGC GCGTATGTGTCGCTACAGAAGCTCTTTACCTTGATGTCCATGGCAGGTTC CCCCAGCAGCATGGCAGATGAGGTTTCGCGTTGTTTCTTCCCACCCCCCT TTTATTTTTTCCCGATGCTCATCTACACACGACGTGCGTTGTGGGTCTTT GTAAAGCGTAGGGACCCGCGCCGCGTTGTGAGTGTATGGTGTTTGTTTTT TATTCGTTTTTGATCGACGAAGATGCCGTATTGTTAGCCTAACAGATTCA CATGTTATGACTACCCTCCTTCCTCCGTAAGTTAGTCGCTGCTGGGCTGA TCGCTCGAGCAAGACGAGCATGTTGTTTTTCGTGGGGGGCTAACCATGTG ATGGCTGTCTTTATTCCAAACTAGTAGTACATGACCCAATGCCATCAGGT GATTTTTAGTGCTGCAGCGGGCGCGACAGCTATCCAAAAAGACTTGGTGG ACCTGTGGTGGAACACGACCTTCGTCTCGCGGGAAGGTAAGGGATGTTTT AAGTATAACCGTGAAAGATGGGGTATCCCAATGTAATGATTTCGCCACGT TCGTCGCTACCCTATGCTCGAACAATAGGCCGGGGCGAGCATGTACTGAC GTCTAGGAATCTTCGTTTTCCCTCGTAAATGGAGTGCTTATAAGAACATT GAAAAGGGGTAGTTGTTCCGTGCGTCGCTTTGCCGGAGTATCTTGATACG TTGCTGGCGTTTCATTTGACTCGTCACGGGCGAGCATATTATATACACAC CCGGATGGGTCGTTCAACCACATAGGCACCATTTGACAACATTAGATACT GAAAACATAGTAGGCACGTAACCTACCACCTACACATGGCAGGACTTTTG CACACATTTTGCGCCTGTTACAATCATGGGGTTATTTCTCTACTTGTAAA TATTGCACCCCGCGGACGAATACGAATACTTGCAAATGTTTTTCACAAAA ACCTGAAAGTATTCGACTGAGTTTCATAATGAGCGGACGCGTAAAATGAA GTACCCACCCCTGTTCATTCGATTTACGAGTATTATTAGCAGTCGTGGAT GGCCCAAGGCACATAAAATAGACGAGCTCATGCTGAAGCTCAGGCGAATA CTTCCATTTTCTTGTGAAAACCATTAAAACCATCTGCAAGTATTCGTATC TGTCCAGGGGGTGAAGTATTGCTTTCTCTGTGAGCACAGAGTAGTTTTAC CAAGAAAAAGTACCCCTTTTCTCCGCTCCGATTTTTTTATACTAATTTTG TAATATTCCAACACAAGTGCCCCTTATTAAGCTCGGCTCATGTGACAAAC TCCTTGGCTGACGTGAACATTGAATTTTCTATCTGTGCGGCAGGCGGCAA CCAGGACTTTGAGGTGAAGGATGTAGATATATTTTCGTCCAAGCTGGCCA ACCGGCTGCAGCGAGCAGGCGCGCGCATCGTACTCTTCCACACGCACCCC CACGCCGAAAGTCCCGCCCGCCGTATGCCGGCGAATAGTAGCAGTTGTAG CGGCCCACCTGACGTGGATGACTCCAATTCTGGACAGCAGGTACACTCCA ACGAACAGCAGAGTGGAGAAGAGGGGCAGGAGCAAGTCCTACAGGACGAT GCAGATCGGCCCTTCCCGTCGCGAACGGTTCCGGCAAGCGACAGAACCAG CGACCCTAACGGCGGCATGAATGACAACCAAAACGAAATTCAGCCGAAAG GTGCTATTGGCGATGTAAACACTGCAAATATTTCCAACACCATCCCGCTG CGTGGTTCAGAGGAGGAGACTGTAGCGGCAGGCGAAAGCGACGAATTCAC GCTCAAGCATCCACCACGTAGGCATCCTTCGGGAGCGGAAGGACAGGACG CGAGCAATTTGCCCCGATCCCCGTCGCTCCCAGGCCCGTCACCCGCAGGC TGGGCTTCTCCCACTTGGATGTTCGACGGTCGTCTGCCGTCGTCGAGCGG ACCGGGTCCATCGTCAGGGACGGCGGTGAGCAACGATGCCAATGCCGCTT TGGACTGGTGGAAGGGAAAGATGTGGTCTAGCGGCCAGACAGATGAAGAC GAGGCGCCGGCGGAGGCTGAGGGTGTTGGCGGCAATACCAGGTCAAAAAA CGACAGAGCGGCAGGGTCTGGGGTGAGGGAGAAACGACACGCGCTAATGA CGGAGGTGAACTCGGGAGCAACGACGAGCGCACCGACGGCCACGGGCGGG TCCACACGCGATAGATTAGGGCGGCAGCCGTACGAGACGGAGTCTGAATC GGATGATCAGGTGGCGGTGCGTGCGTCGGGGTTCGCAAGCTCGGCGCCGG CGGGGTACGGTGGTGAGGTGGATGGGCGGCCGCAAAAGGCAAAGTTTTTC GGTGAAGGCGGGACGGGGACGGTGACGGCGTCGTTTTCGGCTCGAAGCGT GCAGTGGGTGGCGGAGATGGAGATGGCTTTTGAGATGGAGCGCAGGAGAT GGGAGGAGTGAGTAAGAGATACTGTACAAAAAAAATACTATGCTTGCAGT ACCTGTACAAGCGGTAGCATCGTCTACTTTTTGGTTGTTACTACCGAAAG CGAGAACCAGGCGACATGATTGAGGGCGCGCAAACAGTTTTCTGCTATTT GTGCGCATGTTTATGAAAATGAATCGTAGATGGATTACAAGCGGCGCGAC TGACGTTTTTGTGGTTCTGTATATGTAATAGGGGTTACTATTTTCCGACG AGACGCCTCAGTCCTGCCAACACGATCGAGTTTTGATGCACTCGACATCA TCTTTTGATGCCGACTACTGTACTATGCCAGTCGTCCAAAAATGTCGCCA AGCGAGGGTTATACTGAATGGTGTAGTGTTGGTCGATTGTCACGAAAAAC GCTTGAATCAAAGGATGCAAAAGCCGTTCCGAGACGGAACATAACCTTAC TGTATGTATTAATGGTGCGCCTCCCTATCTTTGCTGGTATACAGACATCG CAGTTGCTTGGAGGCAGAATTAGATTTCGCGTTGGCGGCACGCGCGAGGG CGGAGGCAAGGAGTGAGGAGGTGAGAGCATGACGTGCCTTCTCACAAGAA ACAAATGCACCGAAGCGTCCCGTCGGATTCACGTGCAACCAGTCTCTGTT TTTATTTTATTCTTGTTGTTAGTTGGGTATTATTTCACTAGCTACTACTA TCCCGTTTTCGTCAATTGTGCGCGCAACCGGCAGTTTCGATTTCAGCCCC ACTGATCCACGGTGTTCTATTGAGTACTATTGAGTACTGACGGGCACAGA AAGTGCTTTGTACAGCAGAAACCGTTATTGGTGTTTTGTCTAAGCCGCTG CCTCTTACATTTTGTGAGTACAACTTATGAAGCCCGGTTGGCCCCGATGA ACAGGAGTATGGGGCTTACCTCATATGCTCTAGTGACTCGATGATGTTCG GATAGTAAAGTATTGAGCGAGAAACAGACAACCTTGGATATTTTTTTATC TACGTTATCATCGCCTCGTACTCCCCTTGAGGGCGCGCTGTGAATTTACT GCACATTTAGTCTTGCCTCACGGGCCATTCCTACAGCATCCAATGCTCAA CCCTTGGGCGCCTCTCGACTCCGCAGGATAGGGCTAGGGTGGATGTGCTC GAGAGGCGGCTTACCGCCTGGCGCAGTGAGGTGCGTTGAGGGAGTTTACT TGTGGGCACGATTGGATGAACTGGTCCTCCCTGTGTGACTTATGGTATTT TGTAAGGGGTCATTTTTTTTTTTTTTTAACAATTTCTGCTCAGGTGCTCA CTAAAGCAAGAATACGGGACAGTAAAAGGCCAAGGACAGGTTGCGCTATG GGTTGGATGCCGTGAATGGGTCACTTGTGACTTCTGCATGTAGTCGAGTC TCTTGTGGCGAGTTATTGTCGCCTTAATCCGACCTAGATCCTTCCGTCTA GCCACACACGTTTCAGCTTTGAAATTATAGCAGGGAAATTCGCCCAAAAA GAGACGTAGCTGTTCCCCTTCACTTGTAGCGCAAAAAAGGTCGATATGTA TATATTTGCTGTCACTTTCTTTGCTTTTGGTTTGACAAGCAGTACGAGGA ACCACTGCAGTAGACCTGTAAACTTCACTCAAGGCGGGTGTCTATGCCCT CGTCCCCCTTCCGCGCCGTGATTTGTTTTGGTATATCTATTTCTCCTAAC GGTCATATAGCACGCGATGATCGAGGGGGACGTGAAGAAAGCCGTTAGGC TATTGGAAATGAGCCTCTCAGGCCTCGTTTCGGCGGAGAGCGCTTTGAAG AGGTGGAAGGACCACATACCGGACAAG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig7598:2969..10545-

>mRNA_H-paniculata_contig7598.15589.1 ID=mRNA_H-paniculata_contig7598.15589.1|Name=mRNA_H-paniculata_contig7598.15589.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4254bp|location=Sequence derived from alignment at H-paniculata_contig7598:2969..10545- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAGCACCTTTACCGGAACCCTCGCACCGAGGTCCAGCGATTGCTGGACAA
GTACCACGCCAATCAGTACAAAGTGTACAATTTCGCAAGCGAGCCTGGGC
GGACCTATCCAGCCCAGCTGTTTCATGGGCGTGTCGAGAGGAGCACCTTT
ACCGGAACCCTCGCACCGAGGTCCAGCGATTGCTGGACAAGTACCACGCC
AATCAGTACAAAGTGTACAATTTCGCAAGCGAGCCTGGGCGGACCTATCC
AGCCCAGCTGTTTCATGGGCGTGTCGAGAGGTTTCCTTTTGCCGATCACA
CGTGCCCACCTTTGGAATCCGTGGTGGATTTCTGTGAGAGTGCCAAGGCA
TGGTTGGATACTGACGAGGCCAACGTGGTGTCGCTTCACTGCAAGGCCGG
GAAGGGGAGAGCGGGGATCATGGCGGCGTGTCTCATGGTACGGATGGGAG
AGACGGCAGAAGCGGCCCTGGCGACGTTTGATGCGGTTTCCTTTTGCCGA
TCACACGTGCCCACCTTTGGAATCCGTGGTGGATTTCTGTGAGAGTGCCA
AGGCATGGTTGGATACTGACGAGGCCAACGTGGTGTCGCTTCACTGCAAG
GCCGGGAAGGGGAGAGCGGGGATCATGGCGGCGTGTCTCATGGTACGGAT
GGGAGAGACGGCAGAAGCGGCCCTGGCGACGTTTGATGCGACGAGAGTTT
GGGACGCAAAGGGGCTGACGGTCGTCAATCAGCGGAAATGGGTTTTCATG
TACGAGAGGCTCATCAAGGAGACGAGAGTTTGGGACGCAAAGGGGCTGAC
GGTCGTCAATCAGCGGAAATGGGTTTTCATGTACGAGAGGCTCATCAAGG
AGATATGGGGACTGCAAGACAGCATTGGCATGGTTCCGGGGCAGGACCCT
GATCTAAGGGCACCGTCTCCAGCGACAATATGCATTCGCGAAATTTCCGT
GCAAATGGAACCTACCACGGACGGAAAGCAAAATATCAACCTGTTGATAT
GGGGACTGCAAGACAGCATTGGCATGGTTCCGGGGCAGGACCCTGATCTA
AGGGCACCGTCTCCAGCGACAATATGCATTCGCGAAATTTCCGTGCAAAT
GGAACCTACCACGGACGGAAAGCAAAATATCAACCTGTTGACGAACCTGT
CCTGCTCCTTGTATCAGCAGAAGGCCACGGGCAAGGTGCTTGTATATAGC
GCGAAGTTAGTCAATGGAGCGCCTCGCGACGGGGAACCGGGGATGGTCTT
GGCGGCAGCTCTGCCCCGCACAGCTGTGCTACAGGGGACATTTCAGACGA
ACCTGTCCTGCTCCTTGTATCAGCAGAAGGCCACGGGCAAGGTGCTTGTA
TATAGCGCGAAGTTAGTCAATGGAGCGCCTCGCGACGGGGAACCGGGGAT
GGTCTTGGCGGCAGCTCTGCCCCGCACAGCTGTGCTACAGGGGACATTTC
AGGTGATTTTTAGTGCTGCAGCGGGCGCGACAGCTATCCAAAAAGACTTG
GTGGACCTGTGGTGGAACACGACCTTCGTCTCGCGGGAAGGTGATTTTTA
GTGCTGCAGCGGGCGCGACAGCTATCCAAAAAGACTTGGTGGACCTGTGG
TGGAACACGACCTTCGTCTCGCGGGAAGGCGGCAACCAGGACTTTGAGGT
GAAGGATGTAGATATATTTTCGTCCAAGCTGGCCAACCGGCTGCAGCGAG
CAGGCGCGCGCATCGTACTCTTCCACACGCACCCCCACGCCGAAAGTCCC
GCCCGCCGTATGCCGGCGAATAGTAGCAGTTGTAGCGGCCCACCTGACGT
GGATGACTCCAATTCTGGACAGCAGGTACACTCCAACGAACAGCAGAGTG
GAGAAGAGGGGCAGGAGCAAGTCCTACAGGACGATGCAGATCGGCCCTTC
CCGTCGCGAACGGTTCCGGCAAGCGACAGAACCAGCGACCCTAACGGCGG
CATGAATGACAACCAAAACGAAATTCAGCCGAAAGGTGCTATTGGCGATG
TAAACACTGCAAATATTTCCAACACCATCCCGCTGCGTGGTTCAGAGGAG
GAGACTGTAGCGGCAGGCGAAAGCGACGAATTCACGCTCAAGCATCCACC
ACGTAGGCATCCTTCGGGAGCGGAAGGACAGGACGCGAGCAATTTGCCCC
GATCCCCGTCGCTCCCAGGCCCGTCACCCGCAGGCTGGGCTTCTCCCACT
TGGATGTTCGACGGTCGTCTGCCGTCGTCGAGCGGACCGGGTCCATCGTC
AGGGACGGCGGTGAGCAACGATGCCAATGCCGCTTTGGACTGGTGGAAGG
GAAAGATGTGGTCTAGCGGCCAGACAGATGAAGACGAGGCGCCGGCGGAG
GCTGAGGGTGTTGGCGGCAATACCAGGTCAAAAAACGACAGAGCGGCAGG
GTCTGGGGTGAGGGAGAAACGACACGCGCTAATGACGGAGGTGAACTCGG
GAGCAACGACGAGCGCACCGACGGCCACGGGCGGGTCCACACGCGATAGA
TTAGGGCGGCAGCCGTACGAGACGGAGTCTGAATCGGATGATCAGGTGGC
GGTGCGTGCGTCGGGGTTCGCAAGCTCGGCGCCGGCGGGGTACGGCGGCA
ACCAGGACTTTGAGGTGAAGGATGTAGATATATTTTCGTCCAAGCTGGCC
AACCGGCTGCAGCGAGCAGGCGCGCGCATCGTACTCTTCCACACGCACCC
CCACGCCGAAAGTCCCGCCCGCCGTATGCCGGCGAATAGTAGCAGTTGTA
GCGGCCCACCTGACGTGGATGACTCCAATTCTGGACAGCAGGTACACTCC
AACGAACAGCAGAGTGGAGAAGAGGGGCAGGAGCAAGTCCTACAGGACGA
TGCAGATCGGCCCTTCCCGTCGCGAACGGTTCCGGCAAGCGACAGAACCA
GCGACCCTAACGGCGGCATGAATGACAACCAAAACGAAATTCAGCCGAAA
GGTGCTATTGGCGATGTAAACACTGCAAATATTTCCAACACCATCCCGCT
GCGTGGTTCAGAGGAGGAGACTGTAGCGGCAGGCGAAAGCGACGAATTCA
CGCTCAAGCATCCACCACGTAGGCATCCTTCGGGAGCGGAAGGACAGGAC
GCGAGCAATTTGCCCCGATCCCCGTCGCTCCCAGGCCCGTCACCCGCAGG
CTGGGCTTCTCCCACTTGGATGTTCGACGGTCGTCTGCCGTCGTCGAGCG
GACCGGGTCCATCGTCAGGGACGGCGGTGAGCAACGATGCCAATGCCGCT
TTGGACTGGTGGAAGGGAAAGATGTGGTCTAGCGGCCAGACAGATGAAGA
CGAGGCGCCGGCGGAGGCTGAGGGTGTTGGCGGCAATACCAGGTCAAAAA
ACGACAGAGCGGCAGGGTCTGGGGTGAGGGAGAAACGACACGCGCTAATG
ACGGAGGTGAACTCGGGAGCAACGACGAGCGCACCGACGGCCACGGGCGG
GTCCACACGCGATAGATTAGGGCGGCAGCCGTACGAGACGGAGTCTGAAT
CGGATGATCAGGTGGCGGTGCGTGCGTCGGGGTTCGCAAGCTCGGCGCCG
GCGGGGTACGGCGGGACGGGGACGGTGACGGCGTCGTTTTCGGCTCGAAG
CGTGCAGTGGGTGGCGGAGATGGAGATGGCTTTTGAGATGGAGCGCAGGA
GATGGGAGGAGCGGGACGGGGACGGTGACGGCGTCGTTTTCGGCTCGAAG
CGTGCAGTGGGTGGCGGAGATGGAGATGGCTTTTGAGATGGAGCGCAGGA
GATGGGAGGAACATCGCAGTTGCTTGGAGGCAGAATTAGATTTCGCGTTG
GCGGCACGCGCGAGGGCGGAGGCAAGGAGTGAGGAGACATCGCAGTTGCT
TGGAGGCAGAATTAGATTTCGCGTTGGCGGCACGCGCGAGGGCGGAGGCA
AGGAGTGAGGAGGATAGGGCTAGGGTGGATGTGCTCGAGAGGCGGCTTAC
CGCCTGGCGCAGTGAGGATAGGGCTAGGGTGGATGTGCTCGAGAGGCGGC
TTACCGCCTGGCGCAGTGAGCACGCGATGATCGAGGGGGACGTGAAGAAA
GCCGTTAGGCTATTGGAAATGAGCCTCTCAGGCCTCGTTTCGGCGGAGAG
CGCTTTGAAGAGGTGGAAGGACCACATACCGGACAAGCACGCGATGATCG
AGGGGGACGTGAAGAAAGCCGTTAGGCTATTGGAAATGAGCCTCTCAGGC
CTCGTTTCGGCGGAGAGCGCTTTGAAGAGGTGGAAGGACCACATACCGGA
CAAG
back to top