mRNA_H-paniculata_contig7581.15568.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig7581.15568.1
Unique NamemRNA_H-paniculata_contig7581.15568.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig7581.15568.1 vs. uniprot
Match: A0A540MM95_MALBA (Integrase catalytic domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540MM95_MALBA)

HSP 1 Score: 239 bits (610), Expect = 1.710e-70
Identity = 158/433 (36.49%), Postives = 237/433 (54.73%), Query Frame = 1
Query:   28 LRSNQGGGFTREAFRQFCAENCIKQELSTAYTPQQNGEAERSWRSVFEMTRSKMITANMGRRYWAEAARAAV*CLNRALTRSHNGGTPYEKWHGTTPKLDHLRVFGCTAYMMFQSQRRRKLDDKAWAGMFLGYDEDSPSYRIYDPKNKRMQLSRNVRFDEE---DFVTGHRGQL----EYDGTRGTGGLLSAPSVTPAVTRSRARGEQGNVANTKDQTSASQMDGGEDSARSVTNTNTGESEGAESTAEAFNDP------------------EAGKWHVAMEEEWGALVENGTWESEDPGSLPAGRKAIRTK*VLKRKLKEDGSVARYKARLVAQGFS*MEGEDFFETSAPIVRMSTLRTVFRLVAEHDFELEGMDVDAVYLSTSLEKELFVKLPPEFFPFFQGIPFVRYLRKSLYGLKQSGRNWNNPLDDFL 1251
            +RS++GG FT + F++FC  N I++ L+   +PQQNG AER  R++ +M RS + +  + +  WAEA   AV   NR+ TRS  G TP E W G  P + HLRVFG  A++    +RR KLDDK+   +F+GYD +S  Y++Y+P N++M +SR+V FDEE   DF   H G L    +++     G +  A  V    T   A     N  N+   TS+S    G  + R V  T +         AE  ++P                  +  KW  AM+EE  A+ +N TWE      LP G+KAI  K V K K   +G V RYKARLVA+G+S   G D+ E  AP+ R+ T+R +  L A++ ++++ MDV + +L+  LE+E++++ P  +         ++ L+K+LYGLKQ+ R WN+ +D + 
Sbjct:    1 MRSDRGGEFTSKEFQEFCEANGIRRSLTVPRSPQQNGVAERKNRTILDMVRSMLKSKRLPKEMWAEAVACAVYLSNRSPTRSVWGKTPQEAWSGRKPGISHLRVFGSIAHVHVPDERRAKLDDKSEKFIFIGYDSNSKGYKLYNPNNRKMVISRDVTFDEEEEWDFGP-HAGDLHFFPQFEEENEQGTMEQAREVQQESTTPPASPISTNHGNSPASTSSS----GSLNEREVPRTRS--IRDLYEVAERLDNPTLFCLFADCEPVDFQEAVQDTKWKKAMDEEIEAIEKNETWELT---VLPKGQKAIGVKWVYKTKKNANGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETIRLLISLAAQNKWKIQQMDVKSAFLNGVLEEEVYIQQPSGYEIKGHEDKILK-LKKALYGLKQAPRAWNSRIDKYF 422          
BLAST of mRNA_H-paniculata_contig7581.15568.1 vs. uniprot
Match: A0A2M4CK12_ANODA (Putative pol polyprotein (Fragment) n=1 Tax=Anopheles darlingi TaxID=43151 RepID=A0A2M4CK12_ANODA)

HSP 1 Score: 241 bits (616), Expect = 1.370e-68
Identity = 153/427 (35.83%), Postives = 229/427 (53.63%), Query Frame = 1
Query:   22 KRLRSNQGGGFTREAFRQFCAENCIKQELSTAYTPQQNGEAERSWRSVFEMTRSKMITANMGRRYWAEAARAAV*CLNRALTRSHNGGTPYEKWHGTTPKLDHLRVFGCTAYMMFQSQRRRKLDDKAWAGMFLGYDEDSPSYRIYDPKNKRMQLSRNVRFDEE---------DFVTGHRG----QLEYDGTRGTGGLL----SAPSVTPAVTRSRARGEQGNVANTKDQTSASQMDGGEDSARSVTNTNTGESEGAESTAEAFNDPEAGKWHVAMEEEWGALVENGTWESEDPGSLPAGRKAIRTK*VLKRKLKEDGSVARYKARLVAQGFS*MEGEDFFETSAPIVRMSTLRTVFRLVAEHDFELEGMDVDAVYLSTSLEKELFVKLPPEFFPFFQGIPFVRYLRKSLYGLKQSGRNWNNPLDDFL 1251
            K +RS+QGG ++ +  + F     IK + + +Y+PQQNG AER  RS+ EM R  +  A + ++YWAEA   AV   N + T+  N  TPYE WHG  PK++HLR+FGC A+      +R+KL   A    FLGY  D  +YR+ D     + +SR+V+F E+         D  T H+     ++  D T     +     + P V PA   +R    +  + +  +   +++   G    R + N    + E   + +EA    E+  W  AM+EE  AL  N TWE      LP GRKA+  K   KRK  E+G + RYKARLVAQG+S   G+D+ E  AP++R +T RT+  L ++ +  ++ +D+   YL   L++++++K PP F    +G   V +L+KSLYGLKQS R WN  +D  L
Sbjct:  100 KAIRSDQGGEYSSKNLQDFYKREGIKPQYTASYSPQQNGVAERKNRSLIEMVRCMLFDAQLEQKYWAEAMNTAVYLQNISPTKPRNN-TPYETWHGVKPKVNHLRIFGCDAWAHIPKAKRKKLGATAQKLTFLGYSYDHKAYRLLDKTTNEIHISRDVKFIEKAPCSERAKHDRETRHQSKKPQEIIIDTTLKENPITIETQAEPEVQPAFEETREIVSE--IDSDTEPRRSTRPTKGIPPDRLMANVIKHQIEQPHTYSEAIESTESTAWRAAMQEEINALQGNDTWELV---RLPLGRKAVGCKWTYKRKENENGEIVRYKARLVAQGYSQKFGQDYDEVFAPVIRQATFRTILTLASKQNMIVKHLDIKNAYLHAELQEDIYMKQPPGFT---KGNDLVCHLKKSLYGLKQSARAWNAKIDRVL 517          
BLAST of mRNA_H-paniculata_contig7581.15568.1 vs. uniprot
Match: A0A7D9DPP1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9DPP1_PARCT)

HSP 1 Score: 239 bits (610), Expect = 2.520e-66
Identity = 158/441 (35.83%), Postives = 232/441 (52.61%), Query Frame = 1
Query:    7 TGYKIKRLRSNQGGGFTREAFRQFCAENCIKQELSTAYTPQQNGEAERSWRSVFEMTRSKMITANMGRRYWAEAARAAV*CLNRALTRSHNGGTPYEKWHGTTPKLDHLRVFGCTAYMMFQSQRRRKLDDKAWAGMFLGYDEDSPSYRIYDPKNKRMQLSRNVRFDEEDF---------------VTGHRGQLEYDGTRGTGGLLSAPSVT--------PAVTRSRARGEQGNVAN--TKDQTSASQMDGGEDSARSVTNTNTGESEGAESTAEAFNDPEAGKWHVAMEEEWGALVENGTWESEDPGSLPAGRKAIRTK*VLKRKLKEDGSVARYKARLVAQGFS*MEGEDFFETSAPIVRMSTLRTVFRLVAEHDFELEGMDVDAVYLSTSLEKELFVKLPPEFFPFFQGIP-FVRYLRKSLYGLKQSGRNWNNPLDDFL 1251
            TG K+K LR++ GG +    F ++C    I  + S  YTPQQNG +ER  R++ E  +S +  ANM   +WAEA   AV   NR+ T S N  TPYE W    P + +L+VFG   ++   S  RRKLD ++   +F+GY  D+  Y++YD ++K    S++V F E  F               V   +  ++++        +  P+V         PAV  S        V N  TK Q  A +    ++   ++T + T E+E  +S +EA N   A KW  A++EE+ +L+ N TWE   P   P G   I +K V+K K   DG+V R+KARLVAQG+S   G D+ E  +P+ R S++RT+  L  +H+ E+  MDV   +L+  +E ++++  P  F    Q  P +V  L+KSLYGLKQS R WN  LD FL
Sbjct:  493 TGLKVKTLRTDNGGEYVSNDFSKYCVNKGIVHQYSNPYTPQQNGVSERLNRTLMESAKSMIFHANMPINFWAEAVNTAVYLHNRSPTTSLNMKTPYELWFSKKPDVSNLKVFGSVCFIHIPSNLRRKLDPRSRKAVFIGYPLDTKGYKLYDIESKNFVRSKDVVFYENKFHDFKVVTKELIIREDVPEEKLSVDHEQHHDAEDQVPVPTVPDIEDEENLPAVGESYEESFMKQVENLETKRQRKAPKKFSPDEC--NITESLTAENEEPQSISEALNGANASKWKQALKEEYNSLISNETWELVPP---PEGCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGIDYEEVFSPVARHSSIRTLLALANKHNLEIHQMDVKTAFLNGYIEHDIYMSQPDGFVD--QEHPEYVCKLKKSLYGLKQSARCWNQTLDSFL 926          
BLAST of mRNA_H-paniculata_contig7581.15568.1 vs. uniprot
Match: A0A5B7BAX9_DAVIN (Putative lectin receptor kinase (Fragment) n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7BAX9_DAVIN)

HSP 1 Score: 226 bits (575), Expect = 3.660e-66
Identity = 151/427 (35.36%), Postives = 228/427 (53.40%), Query Frame = 1
Query:   16 KIKRLRSNQGGGFTREAFRQFCAENCIKQELSTAYTPQQNGEAERSWRSVFEMTRSKMITANMGRRYWAEAARAAV*CLNRALTRSHNGGTPYEKWHGTTPKLDHLRVFGCTAYMMFQSQRRRKLDDKAWAGMFLGYDEDSPSYRIYDPKNKRMQLSRNVRFDE------EDFVTGHRGQLEYDGTRGTGGLL---SAPSVTPAVTRSRARGEQGNVANTKDQTSA-----------SQMDGGEDSARSVTNTNTGESEGAESTAEAFNDP-EAGKWHVAMEEEWGALVENGTWESEDPGSLPAGRKAIRTK*VLKRKLKEDGSVARYKARLVAQGFS*MEGEDFFETSAPIVRMSTLRTVFRLVAEHDFELEGMDVDAVYLSTSLEKELFVKLPPEFFPFFQGIPFVRY-LRKSLYGLKQSGRNWN 1230
            KI  LRS++GG +T  AF+++C E  I+ + +TAYTPQQNG AER  R++  MTR+ +    + +++WAEA   +    NR  T+S    TP E W G  P + HLR+FGC AY      +R+KLDD+    +F+GY E+S +Y++Y+P  K++ +SR+V F+E       D  T     +  D    +  +    + PS  PA   +  RG   +V  + + +S            +Q + GE +   +          A+     F +  E   W  AMEEE  A+ +N TWE      LP  +KAI  K + K K   DG V RYKARLVA+G+    G D+ E  AP+ R+ T+R +  L A H +++  +DV + +L+  LE+E++V+ P  F    +G     Y L+K+LYGLKQ+ R WN
Sbjct:    2 KIVTLRSDRGGEYTSNAFQEYCREQGIRHQFTTAYTPQQNGIAERKNRTILNMTRTMLKEKGLSKQFWAEAVACSTYLPNRYPTKSVKHMTPQEAWSGYKPNVAHLRIFGCVAYAQVPEAKRKKLDDRGEKCIFIGYSEESKAYKLYNPLTKKVVVSRDVIFNEGEVWIWSDVETSKVQPVMEDPEEPSPEISPPGAPPSPQPATPSTVQRGFPPSVGGSSNSSSKPIKMRSLREIYAQTEDGETNLFCLY---------ADHEPLTFQEAMEKDCWRSAMEEEIHAIEKNDTWELT---ILPQKQKAIGIKWMYKIKCTADGEVDRYKARLVAKGYRQKYGIDYDEVFAPVARLDTVRLLISLAAHHSWKIYQLDVKSAFLNGILEEEVYVQQPEGFLV--EGEEHKVYRLKKALYGLKQAPRAWN 414          
BLAST of mRNA_H-paniculata_contig7581.15568.1 vs. uniprot
Match: A0A151T355_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T355_CAJCA)

HSP 1 Score: 238 bits (607), Expect = 6.080e-66
Identity = 154/426 (36.15%), Postives = 222/426 (52.11%), Query Frame = 1
Query:    4 QTGYKIKRLRSNQGGGFTREAFRQFCAENCIKQELSTAYTPQQNGEAERSWRSVFEMTRSKMITANMGRRYWAEAARAAV*CLNRALTRSHNGGTPYEKWHGTTPKLDHLRVFGCTAYMMFQSQRRRKLDDKAWAGMFLGYDEDSPSYRIYDPKNKRMQLSRNVRFDEEDFVTGHRGQLEYDGTRGTGGLLSAPSVTPAVTRSRARGEQGNVANTKDQTSASQ----------MDGGEDSARSVTNTNTGESEGAESTAEAFNDPEAGKWHVAMEEEWGALVENGTWESEDPGSLPAGRKAIRTK*VLKRKLKEDGSVARYKARLVAQGFS*MEGEDFFETSAPIVRMSTLRTVFRLVAEHDFELEGMDVDAVYLSTSLEKELFVKLPPEFFPFFQGIPFVRYLRKSLYGLKQSGRNWNNPLDDFL 1251
            +TG ++KRLRS+ G  +T   F++FC +  I+ +L+  YTPQQNG +ER  R+V EM R  +    + + +WAEA   +V  LN   T++  G TP+E WHG TP ++HL+VFGC  Y +    +R KLD K+  G+FLGY   S  YRIY+P  K++ +SRNV+FDE       + + E    R                       Q  V N ++Q S S+          + G  D A      N    E  E  AEA    E   W VAM+EE   + +N TW+  D    P  +K I  K V + KL  DGSV + KARLV +G+    G DF +T AP+ R  T+R +  L A+  +++   DV + +L+  LE++++V   PE F        V  L K+LYGLKQ+ R W   +D++L
Sbjct:  513 ETGLQVKRLRSDNGTEYTAGEFKKFCEQVGIQHQLTVPYTPQQNGVSERKNRTVMEMARCLLFEKGLPKTFWAEAVNTSVYLLNLLPTKALKGNTPFEAWHGRTPSVEHLKVFGCVCYALVPEVKRDKLDQKSEVGIFLGYSSYSKGYRIYNPATKKILVSRNVKFDELSRWNWEKSKAEASNKR-----------------------QLEVDNLQEQNSESEEQNLDDDDFPVRGTRDLAEIYERCNVAALEPKE-YAEAA---ELEGWRVAMQEEMNMIEKNNTWQLVD---RPINQKVIGLKWVYRTKLNYDGSVNKLKARLVVKGYHQQYGVDFLDTFAPVARHDTIRMLVALAAKFGWKIYHFDVKSAFLNGFLEEDIYVD-QPEGFQVKGSENKVYKLHKALYGLKQAPRAWYTRIDNYL 907          
BLAST of mRNA_H-paniculata_contig7581.15568.1 vs. uniprot
Match: V9H0W6_ARATH (Lectin receptor kinase (Fragment) n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=V9H0W6_ARATH)

HSP 1 Score: 230 bits (587), Expect = 7.760e-66
Identity = 150/429 (34.97%), Postives = 230/429 (53.61%), Query Frame = 1
Query:    1 RQTGYKIKRLRSNQGGGFTREAFRQFCAENCIKQELSTAYTPQQNGEAERSWRSVFEMTRSKMITANMGRRYWAEAARAAV*CLNRALTRSHNGGTPYEKWHGTTPKLDHLRVFGCTAYMMFQSQRRRKLDDKAWAGMFLGYDEDSPSYRIYDPKNKRMQLSRNVRFDEEDFVTGHRGQLEYDGTRGTGGLLSAPSVTPAVTRSRARGEQGNVANTKDQTSASQMDGGEDSARSVTNTNTGE-SEGAESTA--------EAFNDPEAGK---WHVAMEEEWGALVENGTWESEDPGSLPAGRKAIRTK*VLKRKLKEDGSVARYKARLVAQGFS*MEGEDFFETSAPIVRMSTLRTVFRLVAEHDFELEGMDVDAVYLSTSLEKELFVKLPPEFFPFFQGIPFVRYLRKSLYGLKQSGRNWNNPLDDFL 1251
            +++G  IK +RS+ GG FT + F ++C +N I+++L+   +PQQNG AER  R++ EM RS + +  + +  WAEA   AV  LNR+ T+S +G TP E W G  P + HLRVFG  A+     ++R KLDDK+   +F+GYD +S  Y++Y+P  K+  +SRN+ FDEE     +  + +Y+               P  TR     E+             +    E + R  +     E +E  E+          E  +  EA +   W  AM+EE  ++ +N TWE     SLP G KAI  K V K K    G V RYKARLVA+G+S   G D+ E  AP+ R+ T+R +  L A++ +++  MDV + +L+  LE+E++++ P  +    +    +R L+K LYGLKQ+ R WN  +D + 
Sbjct:   81 KESGLVIKTMRSDSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNF------FPHFEEDKPEPTREEPPSEEPTTXXXXXXXXQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELT---SLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLR-LKKVLYGLKQAPRAWNTRIDKYF 499          
BLAST of mRNA_H-paniculata_contig7581.15568.1 vs. uniprot
Match: A0A6S7H8C9_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7H8C9_PARCT)

HSP 1 Score: 235 bits (599), Expect = 7.930e-66
Identity = 156/441 (35.37%), Postives = 232/441 (52.61%), Query Frame = 1
Query:    7 TGYKIKRLRSNQGGGFTREAFRQFCAENCIKQELSTAYTPQQNGEAERSWRSVFEMTRSKMITANMGRRYWAEAARAAV*CLNRALTRSHNGGTPYEKWHGTTPKLDHLRVFGCTAYMMFQSQRRRKLDDKAWAGMFLGYDEDSPSYRIYDPKNKRMQLSRNVRFDEEDF---------------VTGHRGQLEYDGTRGTGGLLSAPSVT--------PAVTRSRARGEQGNVAN--TKDQTSASQMDGGEDSARSVTNTNTGESEGAESTAEAFNDPEAGKWHVAMEEEWGALVENGTWESEDPGSLPAGRKAIRTK*VLKRKLKEDGSVARYKARLVAQGFS*MEGEDFFETSAPIVRMSTLRTVFRLVAEHDFELEGMDVDAVYLSTSLEKELFVKLPPEFFPFFQGIP-FVRYLRKSLYGLKQSGRNWNNPLDDFL 1251
            TG K+K LR++ GG +    F ++C    I  + S  YTPQQNG +ER  R++ E  +S +  ANM   +WAEA   AV   NR+ T S N  TPYE W    P + +L+VFG   ++   S  RRKLD ++   +F+GY  ++  Y++YD ++K    S++V F E  F               V   +  ++++        +  P+V         PAV  S        V N  TK Q  A +    ++   ++T + T E+E  +S +EA N   A KW  A++EE+ +L+ N TWE   P   P G   I +K V+K K   DG+V R+KARLVAQG+S   G ++ E  +P+ R S++RT+  L  +H+ E+  MDV   +L+  +E ++++  P  F    Q  P +V  L+KSLYGLKQS R WN  LD FL
Sbjct:   96 TGLKVKTLRTDNGGEYVSNDFSKYCVNKGIVHQYSNPYTPQQNGVSERLNRTLMESAKSMIFYANMPINFWAEAVNTAVYLHNRSPTTSLNMKTPYEVWFSKKPDVSNLKVFGSVCFIHTPSNLRRKLDPRSRKAVFIGYPLNTKGYKLYDIESKNFVRSKDVGFYENKFHDFKVVTKELIIREDVPEEKLSVDHEQHHDAEDQVPVPTVPDIEDEENLPAVGESYEESFMKQVENLETKRQRKAPKKFSPDEC--NITESLTAENEEPQSISEALNGANASKWKQALKEEYNSLISNETWELVPP---PEGCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGINYEEVFSPVARHSSIRTLLALANKHNLEIHQMDVKTAFLNGYIEHDIYMSQPDGFVD--QEHPEYVCKLKKSLYGLKQSARCWNQTLDSFL 529          
BLAST of mRNA_H-paniculata_contig7581.15568.1 vs. uniprot
Match: Q60DG5_ORYSJ (Putative polyprotein n=3 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q60DG5_ORYSJ)

HSP 1 Score: 236 bits (603), Expect = 1.200e-65
Identity = 162/459 (35.29%), Postives = 241/459 (52.51%), Query Frame = 1
Query:    4 QTGYKIKRLRSNQGGGFTREAFRQFCAENCIKQELSTAYTPQQNGEAERSWRSVFEMTRSKMITANMGRRYWAEAARAAV*CLNRALTRSHNGGTPYEKWHGTTPKLDHLRVFGCTAYMMFQSQRRRKLDDKAWAGMFLGYDEDSPSYRIYDPKNKRMQLSRNVRFDE-----------------EDFVT--------GHRGQ---LEYDGTRGTGGL---LSAPSVTPAVTRSRARGEQGNVANTKDQTSASQMDGGEDSARSVTN---TNTG------ESEGAESTAEAFNDPEAGK---WHVAMEEEWGALVENGTWESEDPGSLPAGRKAIRTK*VLKRKLKEDGSVARYKARLVAQGFS*MEGEDFFETSAPIVRMSTLRTVFRLVAEHDFELEGMDVDAVYLSTSLEKELFVKLPPEFFPFFQGIPFVRYLRKSLYGLKQSGRNWNNPLDDFL 1251
            ++G K++ LR+++GG FT   F +FCA+  + ++L+  Y+PQQNG  ER   +V    RS +  A M  ++W EA  AAV  LNR+ T+S +G TPYE WHG  P ++HL+VFGC  Y+       RKLDD+    +F+GY++ S +YR+YDP ++R  +SR+V FDE                 EDF          G+R     +E+ G R T      L+ P   P  +   +    G    T    ++ + DG     R+V N   T T       + E   +  E F+  EA K   W  AMEEE  ++  N TW   D   LP+  +AI  K V K K   +G + +YKARLVA+G+   +G D+ E  AP+ RM T+R +  L A   +++  MDV + +L+  LE++++V  PP F    +    ++ L+K+LYGLKQ+ R W   LD  L
Sbjct:  297 ESGRKLRALRTDRGGEFTSVEFTEFCADRGVSRQLTAPYSPQQNGVVERRNLTVVAAARSMLKAAGMPAQFWGEAVVAAVYLLNRSPTKSLDGVTPYEAWHGRRPSVEHLKVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQGSKAYRMYDPVSRRFYVSRDVVFDEAAMWPWRDPEVTQTGGEEDFTVEFFSTPLGGNRVPDVVVEHGGARETETAPSPLATPDAAPVWSPVTSSSPAGVEFCTPPSDASIESDGAPPRFRTVNNVLATTTPVLDFDYDDECLIAEQEPFSFKEAEKEQCWMKAMEEEMSSIEGNNTWFLCD---LPSDHRAIGLKWVYKIKRSAEGEILKYKARLVAKGYVQQQGIDYEEVFAPVARMETVRLLVALAAHEGWQIHHMDVKSAFLNGELEEDVYVVQPPGFVVEHKENKVLK-LKKALYGLKQAPRAWYAKLDSTL 751          
BLAST of mRNA_H-paniculata_contig7581.15568.1 vs. uniprot
Match: A0A151QZW7_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151QZW7_CAJCA)

HSP 1 Score: 227 bits (579), Expect = 1.570e-65
Identity = 146/423 (34.52%), Postives = 229/423 (54.14%), Query Frame = 1
Query:    1 RQTGYKIKRLRSNQGGGFTREAFRQFCAENCIKQELSTAYTPQQNGEAERSWRSVFEMTRSKMITANMGRRYWAEAARAAV*CLNRALTRSHNGGTPYEKWHGTTPKLDHLRVFGCTAYMMFQSQRRRKLDDKAWAGMFLGYDEDSPSYRIYDPKNKRMQLSRNVRFDE-EDFVTGHRGQLEYDG-----TRGTGGLLSAPSVTPAVTRSRARGEQGNVANTKDQTSASQMDGGEDSARSVTNTNTGESEGAESTAEAFNDPEAGKWHVAMEEEWGALVENGTWESEDPGSLPAGRKAIRTK*VLKRKLKEDGSVARYKARLVAQGFS*MEGEDFFETSAPIVRMSTLRTVFRLVAEHDFELEGMDVDAVYLSTSLEKELFVKLPPEFFPFFQGIPFVRYLRKSLYGLKQSGRNWNNPLDDFL 1251
            ++T   IK +RS++GG FT   F ++C E+ IK+ L+  Y+PQQNG AER  R++ +M RS +   NM +++WAEA + A+   NR         TP E W    P + HLRVFG  AY     Q R KL+D++   +F+GYDE S +Y+++DP NK++ +SR+V  +E + +   +  ++E        ++ T    S     P   R R+  E   + +T  +  A  +                +SE   S  +A  D    KW  AM+EE+ A+  N TWE  +   LP G + I  K V K+K+  +G V RYKARLV +G+   EG D+ E  AP+ RM ++R +  L A+  +++  MDV + +L+  L++E++V+ P  +         +R LRK+LYGLKQ+ R WN  +D++ 
Sbjct:  119 KETSKFIKAIRSDRGGEFTSFEFNKYCEEHGIKRFLTAPYSPQQNGVAERKNRTILDMVRSMLKGKNMPKKFWAEAVQCAIYVQNRCPHAKLGEKTPQEIWSSMKPSVSHLRVFGSVAYGQVPRQHRTKLEDRSKKYIFIGYDEKSKAYKLFDPDNKKVVVSRDVHVEETKQWCWSNSAEVETSSDIVVPSKTTTTEFSDEEFEPQQPRMRSLRE---IYDTTSEVHAVCL--------------LADSEDL-SFEKAVQDE---KWRTAMDEEFEAIERNKTWELTN---LPEGARPIGVKWVYKKKINAEGEVERYKARLVVKGYKQKEGVDYDEVFAPVTRMESIRLLISLAAQRHWQILQMDVKSAFLNGVLKEEVYVEQPLGYMKRGDEKKVLR-LRKALYGLKQAPRAWNERIDEYF 516          
BLAST of mRNA_H-paniculata_contig7581.15568.1 vs. uniprot
Match: A0A6A3B0J2_HIBSY (Agamous-like MADS-box protein AGL6 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3B0J2_HIBSY)

HSP 1 Score: 235 bits (600), Expect = 5.850e-65
Identity = 152/427 (35.60%), Postives = 230/427 (53.86%), Query Frame = 1
Query:    1 RQTGYKIKRLRSNQGGGFTREAFRQFCAENCIKQELSTAYTPQQNGEAERSWRSVFEMTRSKMITANMGRRYWAEAARAAV*CLNRALTRSHNGGTPYEKWHGTTPKLDHLRVFGCTAYMMFQSQRRRKLDDKAWAGMFLGYDEDSPSYRIYDPKNKRMQLSRNVRFDEEDFVTGHRGQLEYDGTRGTGGLLSAPSVTPAVTRSRARGEQGNVANTKDQTSASQMDGGEDS-ARSVTNTNTGES---------EGAESTAEAFNDPEAGKWHVAMEEEWGALVENGTWESEDPGSLPAGRKAIRTK*VLKRKLKEDGSVARYKARLVAQGFS*MEGEDFFETSAPIVRMSTLRTVFRLVAEHDFELEGMDVDAVYLSTSLEKELFVKLPPEFFPFFQGIPFVRYLRKSLYGLKQSGRNWNNPLDDFL 1251
            R++G KIK +RS++GG FT   F++FC  N I++ ++   +PQQNG AER  R++ +M RS + +  + + +WAEA   AV   NR+ TRS  G TP E W G  P + HLR FG  A++    +RR KLDDK+ + +F+GYD +S  Y++Y+P NK+  +SR+V F+EE          E+D    T      P                      +QT   Q+D  +   A   T+ N   S         +   +  EA  +    KW  AM+EE  A+ +N TWE     SLP G KAI  K V K K    G + R+KARLVA+G+S   G D+ E  AP+ R+ T+R +  L A++ ++++ MDV + +L+  LE+EL+++ P  +         ++ L K+LYGLKQ+ R WN+ +D + 
Sbjct:  501 RESGRKIKAMRSDRGGEFTSREFQEFCEANGIRRPMTVPRSPQQNGVAERKNRTILDMARSMLKSKKLPKEFWAEAVSCAVYLSNRSPTRSVWGKTPQEAWSGRKPGISHLRTFGSIAHVHVPDERRTKLDDKSESFIFIGYDANSKGYKLYNPDNKKFVISRDVVFNEEG---------EWDFNSHTDDFNFFPQFEE-----------------DEQTMREQLDESQQELATPPTSPNINHSRRLITFIIVKWESNFQEAVQEK---KWRDAMDEEIKAIEKNDTWELT---SLPKGHKAIGVKWVYKTKQNAKGEIERHKARLVAKGYSQKAGIDYDEIFAPVARLETIRLIISLAAQNKWKIQQMDVKSAFLNGVLEEELYIQQPSGYEVKGHEDKVLK-LNKALYGLKQAPRAWNSRIDKYF 894          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7581.15568.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A540MM95_MALBA1.710e-7036.49Integrase catalytic domain-containing protein n=1 ... [more]
A0A2M4CK12_ANODA1.370e-6835.83Putative pol polyprotein (Fragment) n=1 Tax=Anophe... [more]
A0A7D9DPP1_PARCT2.520e-6635.83Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A5B7BAX9_DAVIN3.660e-6635.36Putative lectin receptor kinase (Fragment) n=1 Tax... [more]
A0A151T355_CAJCA6.080e-6636.15Retrovirus-related Pol polyprotein from transposon... [more]
V9H0W6_ARATH7.760e-6634.97Lectin receptor kinase (Fragment) n=1 Tax=Arabidop... [more]
A0A6S7H8C9_PARCT7.930e-6635.37Retrovirus-related Pol poly from transposon TNT 1-... [more]
Q60DG5_ORYSJ1.200e-6535.29Putative polyprotein n=3 Tax=Oryza sativa subsp. j... [more]
A0A151QZW7_CAJCA1.570e-6534.52Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A3B0J2_HIBSY5.850e-6535.60Agamous-like MADS-box protein AGL6 n=1 Tax=Hibiscu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7581contigH-paniculata_contig7581:9245..10769 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size1251
Cds size534
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7581.15568.1prot_H-paniculata_contig7581.15568.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig7581 9602..10409 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930933.4398847-UTR-H-paniculata_contig7581:9244..96011622930933.4398847-UTR-H-paniculata_contig7581:9244..9601Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7581 9245..9601 +
1691481516.8752954-UTR-H-paniculata_contig7581:9244..96011691481516.8752954-UTR-H-paniculata_contig7581:9244..9601Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7581 9245..9601 +
1622930933.505527-UTR-H-paniculata_contig7581:10409..107691622930933.505527-UTR-H-paniculata_contig7581:10409..10769Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7581 10410..10769 +
1691481516.9211226-UTR-H-paniculata_contig7581:10409..107691691481516.9211226-UTR-H-paniculata_contig7581:10409..10769Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7581 10410..10769 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930933.4579847-CDS-H-paniculata_contig7581:9601..99181622930933.4579847-CDS-H-paniculata_contig7581:9601..9918Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7581 9602..9918 +
1691481516.886768-CDS-H-paniculata_contig7581:9601..99181691481516.886768-CDS-H-paniculata_contig7581:9601..9918Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7581 9602..9918 +
1622930933.474287-CDS-H-paniculata_contig7581:10106..101631622930933.474287-CDS-H-paniculata_contig7581:10106..10163Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7581 10107..10163 +
1691481516.8975866-CDS-H-paniculata_contig7581:10106..101631691481516.8975866-CDS-H-paniculata_contig7581:10106..10163Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7581 10107..10163 +
1622930933.4899387-CDS-H-paniculata_contig7581:10249..104091622930933.4899387-CDS-H-paniculata_contig7581:10249..10409Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7581 10250..10409 +
1691481516.9082072-CDS-H-paniculata_contig7581:10249..104091691481516.9082072-CDS-H-paniculata_contig7581:10249..10409Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7581 10250..10409 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig7581.15568.1

>prot_H-paniculata_contig7581.15568.1 ID=prot_H-paniculata_contig7581.15568.1|Name=mRNA_H-paniculata_contig7581.15568.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=178bp
MMFQSQRRRKLDDKAWAGMFLGYDEDSPSYRIYDPKNKRMQLSRNVRFDE
EDFVTGHRGQLEYDGTRGTGGLLSAPSVTPAVTRSRARGEQGNVANTKDQ
TSASQMDGGEDSARSVTNTNTGESEGAESTAEAFNDPEAGKWHVAMEEEW
GALVENGTWESEDPGSLPAGRKAIRTK*
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mRNA from alignment at H-paniculata_contig7581:9245..10769+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig7581.15568.1 ID=mRNA_H-paniculata_contig7581.15568.1|Name=mRNA_H-paniculata_contig7581.15568.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1525bp|location=Sequence derived from alignment at H-paniculata_contig7581:9245..10769+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGCAAACGGGCTACAAAATAAAACGCCTTCGGTCAAATCAAGGAGGAGG GTTTACGAGAGAAGCGTTCCGACAGTTTTGTGCGGAAAATTGCATTAAGC AAGAACTTTCTACCGCCTACACGCCGCAGCAAAATGGTGAGGCGGAGCGC AGCTGGCGGAGCGTTTTCGAGATGACCAGAAGTAAGATGATAACCGCCAA CATGGGTCGCAGGTATTGGGCGGAAGCAGCGCGCGCGGCTGTGTAATGCT TGAATCGCGCCCTGACGCGATCGCACAACGGAGGGACGCCGTATGAGAAA TGGCACGGCACGACACCAAAGCTTGACCACCTTCGTGTCTTCGGCTGCAC GGCGTACATGATGTTCCAGTCGCAGCGGAGACGCAAACTCGATGACAAAG CGTGGGCAGGGATGTTTTTGGGGTATGACGAGGACAGCCCAAGTTATCGC ATATATGACCCGAAAAACAAGAGGATGCAGTTGAGCAGGAACGTAAGATT TGATGAAGAGGATTTCGTAACCGGTCATCGCGGACAGCTGGAGTACGATG GGACGCGAGGCACGGGAGGCCTGCTTTCAGCACCGTCGGTCACACCAGCG GTCACGCGATCCCGCGCCCGAGGCGAGCAAGGAAACGTAGCCAACACGAA AGACCAGACGTCGGCGTCACAGATGTCGCCGATATTGCGGAAACGTTTGC TGCCAGCCGCCAGCGCAAGCCCATTCAGTGTCTTGAGCGATGACGATGAT GACGAAAGTAACAGCGGCTCCAAGATGAAGGATGTGGAGCCCGCGATCGA AGACGCGCCATCAGCAGGGACAGCCGCACCCGCGTCGCAGGGGAACACCA CGAAGCAGTCAGGGACGGAGGTGAAGACTCTGCGAGATCGGTCACCAATA CGAACACGGGCGAGAGCGAGTGAAAAACGCGAAGAAGATCCAGGCGCTAC CGCGCGCGTGGAAAAAGTGGAAGGTACTGGCAACCTTACAGGGGTGGTAC CTAAGGGGAGCCGAATCCACGGCAGAAGCGTTTAACGACCCAGAGGCGGG AAAATGGCACGTGGCAATGGAAGAGGAATGGGGGGCCTTGGTGGAAAATG GAACATGGGAAAGTGAAGACCCCGGGAGTTTACCAGCAGGGCGGAAGGCG ATTCGTACGAAATAGGTTTTAAAGCGGAAACTGAAGGAGGACGGCAGCGT GGCACGCTACAAAGCGCGACTGGTGGCTCAAGGCTTTTCATAGATGGAAG GTGAAGATTTCTTTGAAACCAGTGCTCCCATAGTTCGCATGTCGACTTTA CGTACTGTTTTTAGGCTGGTCGCCGAGCATGATTTCGAACTAGAAGGCAT GGACGTAGATGCGGTGTATTTGAGCACTTCCTTAGAAAAAGAGCTGTTTG TTAAGCTACCCCCCGAGTTTTTCCCTTTCTTCCAAGGTATACCGTTTGTG CGCTACCTGCGTAAAAGCTTGTACGGCCTCAAGCAGAGCGGTCGAAACTG GAATAACCCTCTTGACGATTTTCTT
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Coding sequence (CDS) from alignment at H-paniculata_contig7581:9245..10769+

>mRNA_H-paniculata_contig7581.15568.1 ID=mRNA_H-paniculata_contig7581.15568.1|Name=mRNA_H-paniculata_contig7581.15568.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1068bp|location=Sequence derived from alignment at H-paniculata_contig7581:9245..10769+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATGTTCCAGTCGCAGCGGAGACGCAAACTCGATGACAAAGCGTGGGC
AGGGATGTTTTTGGGGTATGACGAGGACAGCCCAAGTTATCGCATATATG
ACCCGAAAAACAAGAGGATGCAGTTGAGCAGGAACGTAAGATTTGATGAA
GAGGATTTCGTAACCGGTCATCGCGGACAGCTGGAGTACGATGGGACGCG
AGGCACGGGAGGCCTGCTTTCAGCACCGTCGGTCACACCAGCGGTCACGC
GATCCCGCGCCCGAGGCGAGCAAGGAAACGTAGCCAACACGAAAGACCAG
ACGTCGGCGTCACAGATATGATGTTCCAGTCGCAGCGGAGACGCAAACTC
GATGACAAAGCGTGGGCAGGGATGTTTTTGGGGTATGACGAGGACAGCCC
AAGTTATCGCATATATGACCCGAAAAACAAGAGGATGCAGTTGAGCAGGA
ACGTAAGATTTGATGAAGAGGATTTCGTAACCGGTCATCGCGGACAGCTG
GAGTACGATGGGACGCGAGGCACGGGAGGCCTGCTTTCAGCACCGTCGGT
CACACCAGCGGTCACGCGATCCCGCGCCCGAGGCGAGCAAGGAAACGTAG
CCAACACGAAAGACCAGACGTCGGCGTCACAGATGGACGGAGGTGAAGAC
TCTGCGAGATCGGTCACCAATACGAACACGGGCGAGAGCGAGGACGGAGG
TGAAGACTCTGCGAGATCGGTCACCAATACGAACACGGGCGAGAGCGAGG
GAGCCGAATCCACGGCAGAAGCGTTTAACGACCCAGAGGCGGGAAAATGG
CACGTGGCAATGGAAGAGGAATGGGGGGCCTTGGTGGAAAATGGAACATG
GGAAAGTGAAGACCCCGGGAGTTTACCAGCAGGGCGGAAGGCGATTCGTA
CGAAATAGGGGAGCCGAATCCACGGCAGAAGCGTTTAACGACCCAGAGGC
GGGAAAATGGCACGTGGCAATGGAAGAGGAATGGGGGGCCTTGGTGGAAA
ATGGAACATGGGAAAGTGAAGACCCCGGGAGTTTACCAGCAGGGCGGAAG
GCGATTCGTACGAAATAG
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