mRNA_H-paniculata_contig7574.15561.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7574.15561.1 vs. uniprot
Match: D7FWQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ3_ECTSI) HSP 1 Score: 253 bits (646), Expect = 3.450e-73 Identity = 139/308 (45.13%), Postives = 187/308 (60.71%), Query Frame = 3
Query: 165 DQCWVYMHLNKSGGSTIKHILSR-WSEKYTTYSSEPWKKGADFAAEQAKQLL-GEELDFIAGGYAEGLRPF--VNNRCKWFTIFRHPVPRLVSAYVYCHDHI-DQLCHTSEVNSSRVDLVTFAKHWGNFGVRQLALSLVNVTEVMDDAVATESQA-------SMPGWYILKEYLER---------GGSALEVADGGVGERLPDRALYDMLTPARELLRLNYTAVGILEKFDETLDLFDRALGIPGLHWHKLYAKQGQSNRDRHFATLKKKALAEAWVSAEVKQYIGLDLLLYEHAVDIFNEQKRIYGV 1025
DQCWV+MHL K GGST+K++L R + +Y+ Y S WK G D +A +L GE + +AGGY E LR V+ C++FT+FRHP+ R+VSAY YC + D C + V++ VDL+TFAKHWGNF VRQ AL V V + E+QA + GWY LK YLER G S + L + LYD+L PA +L+R Y AVGILE+++ TL LFD AL IPG++W +A+ G+ D L+ + L +AW +E+K+Y+ LDLLLYEHAVD+F+EQ R YG+
Sbjct: 154 DQCWVFMHLQKCGGSTVKYMLRRSYGSRYSIYDSNQWKLGDDISANFGVKLARGETWNVMAGGYTEALRRSEPVDAGCRFFTLFRHPIARMVSAYFYCRSTLGDAACASEVVDAKDVDLLTFAKHWGNFAVRQFALGFVPSDGVQEYIRTPEAQALHDFDLKKIAGWYQLKMYLERPEKGDWGVPGQSEAMTVEHDAAATL-EAPLYDLLQPAMDLIRSGYVAVGILEQWNTTLHLFDHALEIPGMYWGAQFAEGGKQRVDYKNKRLESETLKQAWTDSELKKYMRLDLLLYEHAVDVFHEQARGYGL 460
BLAST of mRNA_H-paniculata_contig7574.15561.1 vs. uniprot
Match: D7G715_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G715_ECTSI) HSP 1 Score: 236 bits (601), Expect = 2.120e-67 Identity = 142/353 (40.23%), Postives = 187/353 (52.97%), Query Frame = 3
Query: 69 LLCGGVLLLYSYGGNKRATSVYMSARNQRMMD-------------DQCWVYMHLNKSGGSTIKHIL-SRWSEKYTTYSSEPWKKGADFAAEQAKQLLGEE-LDFIAGGYAEGLRPFV-------NNRCKWFTIFRHPVPRLVSAYVYCH-DHIDQLCHTSEVNSSRVDLVTFAKHWGNFGVRQLALSLVNVTEVMDDAVA----------TESQASMPGWYILKEYL-ERGGSALEVADGGVGERLPDRALYDMLTPARELLRLNYTAVGILEKFDETLDLFDRALGIPGLHWHKLYAKQGQSNRDRHFATLKKKALAEAWVSAEVKQYIGLDLLLYEHAVDIFNEQKRIYGV 1025
LL GG+LL YGG+ A + D ++CW++ HL K+GG+T+K +L W + TTY S WKKG +A A L AGGY E LR C+WFT+FRHPV RLVSAY YC D DQLC + V+S VDLVTFA+HWGNF +RQ AL V+ +V D V+ E MPGWY+LK +L +R G A + + G L M P +LLR NY VGILE ++ TL LFD AL +PG+ W + + + G+ N D F K+ L +A E+ +++ LDL LY AVDIFN+Q+ YG+
Sbjct: 41 LLGGGLLLCLLYGGHHAHVLPRPDAAEKSPQDAPALNIEDSPRSENRCWIFNHLQKAGGTTVKRLLFDSWGSESTTYDSYQWKKGQGYAESVAASLASPAGWSAAAGGYLEALRRTPAFQPDDERTPCRWFTVFRHPVSRLVSAYYYCREDPSDQLCASEFVSSRNVDLVTFARHWGNFALRQFALGFVSHDKVKDFLVSPNGGGAMGLTAEQVELMPGWYMLKLFLNDRSGVADDTSPEGT-------RLEYMFRPVVDLLRDNYAVVGILEDWNATLSLFDSALDMPGMTWREEFERSGKLNVDTRFKGEKQDVLQQALSDPEIVKHLSLDLRLYGQAVDIFNQQRHSYGI 386
BLAST of mRNA_H-paniculata_contig7574.15561.1 vs. uniprot
Match: D7G716_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G716_ECTSI) HSP 1 Score: 235 bits (600), Expect = 1.600e-66 Identity = 139/333 (41.74%), Postives = 197/333 (59.16%), Query Frame = 3
Query: 78 GGVLLLYSYGGNKRATSVYMSARNQRMMDDQCWVYMHLNKSGGSTIKHILS-RWSEKYTTYSSEPWKKGADFAAE-QAKQLLGEELDFIAGGYAEGLRPF--VNNRCKWFTIFRHPVPRLVSAYVYCHDHIDQLCHTSEVNSSR-VDLVTFAKHWGNFGVRQLALSLVNVTEVMDDAVATESQASMPGWYILKEYLERGGSALEVADGGV-GER-----------LPDRALYDMLTPARELLRLNYTAVGILEKFDETLDLFDRALGIPGLHWHKLYAKQGQSNRDRHFATLKKKALAEAWVSAEVKQYIGLDLLLYEHAVDIFNEQKRIYGV 1025
GGV L G ++ A SV + ++ QCWV+MHL K GGST+K +L RW ++ Y S WK G +F+A+ AK LG++ + + GGY E LR V C++FT+FRHP+ R+VSAY YC + SEV ++ VDL+TFAKHWGNF +RQ AL V +V + Y LK YLER + DGGV G+R PD LY++L PA +L+R Y AVGILE+++ TL LFD L +P ++W + +A+ G+ + D L+ + L +AW +E+K+Y+ LDLLLYEHAVD+F++Q R +G+
Sbjct: 148 GGVALAGD-GASRSAASVAATVQSPAS-PGQCWVFMHLQKCGGSTVKDLLEDRWGSRFFIYDSMRWKFGDEFSAKFGAKLALGDKWNVMTGGYTEALRLSEPVGAGCRFFTLFRHPIARMVSAYFYCRSVSGDVACASEVMQAKDVDLLTFAKHWGNFALRQFALGFVPSDDVQE--------------YQLKMYLERP----QKEDGGVLGQREAMTAHQDAAATPDAPLYELLQPAMDLVRDGYVAVGILEQWNTTLRLFDHTLDMPVMNWEEQFAESGKHHVDIVNKQLEIETLQQAWTDSELKKYMRLDLLLYEHAVDVFHQQARSHGL 460
BLAST of mRNA_H-paniculata_contig7574.15561.1 vs. uniprot
Match: A0A6H5JY77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY77_9PHAE) HSP 1 Score: 217 bits (553), Expect = 3.860e-61 Identity = 118/299 (39.46%), Postives = 167/299 (55.85%), Query Frame = 3
Query: 171 CWVYMHLNKSGGSTI-KHILSRWSEKYTT---YSSEPWKKGADFAAEQAKQLLGEELDFIAGGYAEGLRPFVNNRCKWFTIFRHPVPRLVSAYVYCHD-HIDQLCHTSEVNSSRVDLVTFAKHWGNFGVRQLALSLVNVTEVMDDAVATE--------SQASMPGWYILKEYLERGGSALEVADGGVGERLPDRALYDMLTPARELLRLNYTAVGILEKFDETLDLFDRALGIPGLHWHKLYAKQGQSNRD-RHFATLKKKALAEAWVSAEVKQYIGLDLLLYEHAVDIFNEQKRIYGV 1025
CWV+ H+NKSGG T+ K I+ +EK + + W G +A + + E F GGY EGLR + + CKWFT+FRHPV R+VSAY YC H DQLC +++S+VDL+TFA+HWGN+G+RQ AL+ + +V + V +E +P WY K YL L D G P+ L L+ A+E L Y AVGI+E++D +++LF+R L + W K + K G+ N F T K AL AW S E+K++I LD+LLY+HA+ + Q G+
Sbjct: 52 CWVFSHMNKSGGMTVRKMIMPFLTEKGVSTALFDDIEWSSGRSYA----ETFVKENAVFTYGGYTEGLRMYDDRDCKWFTVFRHPVSRVVSAYFYCQRAHHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHNEVVSEFCQQARGHGDVCIPAWYRQKHYLH-----LPHQDDFCGPTQPESGLAQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLRRFDWVKEFQKSGKKNSGGSQFETASKSALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGI 341
BLAST of mRNA_H-paniculata_contig7574.15561.1 vs. uniprot
Match: D7FS84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS84_ECTSI) HSP 1 Score: 214 bits (544), Expect = 2.550e-60 Identity = 120/304 (39.47%), Postives = 173/304 (56.91%), Query Frame = 3
Query: 189 LNKSGGSTIKHILSRWSEKYTT----YSSEPWKKGADFAAEQAKQLLGEELDFIAGGYAEGLRPFVN---NRCKWFTIFRHPVPRLVSAYVYCHDHI-DQLCHTS--EVNSSRVDLVTFAKHWGNFGVRQLALSLVNVTEVMDDAVATES---------QASMPGWYILKEYLERGGSALEVADG-----GVGERLPDRA-LYDMLTPARELLRLNYTAVGILEKFDETLDLFDRALGIPGLHWHKLYAKQGQSNRDRHFATLKKKALAEAWVSAEVKQYIGLDLLLYEHAVDIFNEQKRIYGV 1025
+NK+GGST+K++L+ W++ Y S W +G DFA + LG+E + G Y EGLRPF CKWFTIFRHP+PRLVSAY YC D LC T + N+ DL FA+HWG+FG+RQ AL+ V E++ + V ++ + S PGWY LK YL++ E +G G G A + +L P +ELL Y AVG+LE+++ +L LF+ ALG+PG W + + G+ N D F + + L +W +++Y+ LDLLLY++AV + N+Q YG+
Sbjct: 1 MNKAGGSTVKYMLAPWTKAQNVTVGLYDSPQWLEGKDFA----QDFLGDENSLMWGAYTEGLRPFGGLGLRECKWFTIFRHPIPRLVSAYFYCKKKPQDGLCATVALDANADDTDLYAFAEHWGDFGLRQFALAFVLPEELLANKVKYDATGICTPYHGKRSCPGWYELKLYLQQQLDEQEQGEGSRGWDGSGAAASGAATISHLLQPVQELLTNEYAAVGVLEQWETSLLLFNEALGMPGFDWPETFGSIGKKNSDGTFHNEEAEMLLRSWTDPRLRRYLSLDLLLYDYAVSVHNQQVDKYGL 300
BLAST of mRNA_H-paniculata_contig7574.15561.1 vs. uniprot
Match: A0A6H5JNJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ0_9PHAE) HSP 1 Score: 181 bits (460), Expect = 4.370e-48 Identity = 111/294 (37.76%), Postives = 153/294 (52.04%), Query Frame = 3
Query: 171 CWVYMHLNKSGGSTIKHILSRWSE---KYTTYSSEPWKKGADFAAEQAKQLLGEELDFIAGGYAEGLRPFVNNRCKWFTIFRHPVPRLVSAYVYCHD-HIDQLCHTSEVNSSRVDLVTFAKHWGNFGVRQLALSLVNVTEVMDDAVATESQASMPGWYILKEYLERG----GSALEVADGGVGERLPDRALYDMLTPARELLRLNYTAVGILEKFDETLDLFDRALGIPGLHWHKLYAKQGQSNRDRHFATLKKKA-LAEAWVSAEVKQYIGLDLLLYEHAVDIFNEQKRIYGV 1025
CWV+ H NK+GG+T+K L ++E + W D + + LL ++ IAGGYAEGLR CKWFT+ RHP+ RL+SA+ YC + DQLC + D+ FAKHWGN+ + Q AL +V+ E+ + V P W+ K Y E G+ + + + D+L P ELLR NY AVGILE + ++ LFD AL IPG +W A S R ++KKA LA A ++QY+ LDLLLYE+A + EQ R Y +
Sbjct: 37 CWVFTHNNKAGGTTVKTHLRNYAESRNETVALCHSDWYARGD---KGIQDLLNDKPVLIAGGYAEGLRTSAFQGCKWFTMMRHPIARLISAFYYCSGGNRDQLCAANIHKPEDGDIYDFAKHWGNYALLQFALGVVDQHEIFAEEV------DAPAWFKAKLYFEGRLGYPGNMSTATNRTTHDEWQSVWIPDILQPVEELLRSNYAAVGILEHWQRSMMLFDHALEIPGFNW--TVASASLSPRKSQNKIVEKKAMLAAAMTDPVLRQYVWLDLLLYEYACSLHEEQLRRYDL 319
BLAST of mRNA_H-paniculata_contig7574.15561.1 vs. uniprot
Match: A0A6H5JQM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM0_9PHAE) HSP 1 Score: 181 bits (458), Expect = 1.090e-45 Identity = 98/293 (33.45%), Postives = 154/293 (52.56%), Query Frame = 3
Query: 162 DDQCWVYMHLNKSGGSTIKHILS-RWSEKYTTYSSEPWKKGADFAAEQAKQLLGEELDFIAGGYAEGLRPFVNNRCKWFTIFRHPVPRLVSAYVYCHDHI-DQLCHTSEVNSSRVDLVTFAKHWGNFGVRQLALSLVNVTEVMDDAVATESQASMPGWYILKEYLERGGSALEVADGGVGERLPDRALYDMLTPARELLRLNYTAVGILEKFDETLDLFDRALGIPGLHWHKLYAKQG---QSNRDRHFATLKKKALAEAWVSAEVKQYIGLDLLLYEHAVDIFNEQKRIYGV 1025
+D CW++MH++KSG S + + + RW + + + W++G FAA+ ++ + GG E LR CKW TIFRHP+ RL+SAY +C + D +C +E LV FA+ WGNF +RQ AL V+ + V + A +++ WY++KEYL RGG A D L ML P + LL Y AVGI ++ + T+ LF +AL + GL W +A G + +D + + + +A + + + LD+ LYEHA+ +F +Q +G+
Sbjct: 270 EDSCWIFMHMDKSGASGARRVATERWRKDELVFDTVQWRRGDGFAAD----VMASHWKLLHGGCVESLRNHKERSCKWLTIFRHPIARLLSAYHHCLEAPKDPVCPPTESTG----LVVFAELWGNFAMRQFALESVSPSAVKEWAAQRQARTGTSMWYLVKEYLARGGIA------------EDEVLESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSMEGLDWSSSWATLGINEEVKQDSEYDIAESEPFRQALENPRIVSALRLDMSLYEHAMHVFKDQVAQFGI 542
BLAST of mRNA_H-paniculata_contig7574.15561.1 vs. uniprot
Match: A0A6H5JQY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY7_9PHAE) HSP 1 Score: 169 bits (429), Expect = 9.490e-44 Identity = 104/291 (35.74%), Postives = 150/291 (51.55%), Query Frame = 3
Query: 171 CWVYMHLNKSGGSTIKHILSRWSEKYTTYSSEPWKKGADFAAEQAKQLLGEELDFIAGGYAEGLRPFVNNR-CKWFTIFRHPVPRLVSAYVYCHD-HIDQLCHTSEVNSSRVDLVTFAKHWGNFGVRQLALSLVNVTEVMDDAVATESQASMPGWYILKEYLER----GGSALEVADGGVGERLPDRALYDMLTPARELLRLNYTAVGILEKFDETLDLFDRALGIPGLHWHKLYAKQGQSNRDRHFATLKKKALAEAWVSAEVKQYIGLDLLLYEHAVDIFNEQKRIYGV 1025
CWVY +NK+GG++I+ ++ ++ T E + +Q+L I G Y EGLRP+ CKWFT+ RHP+ RLVSA+ YC DQLC T D+ FA+HWGN GV Q AL+ E ++D + TE ++ P WY K Y E G A+ + + + ++L P ELLR Y AVGILE+++ ++ LFD AL +PG +W A + R+ H + K L + +KQ + LD+LLYEHA + Q YG+
Sbjct: 37 CWVYTDMNKAGGTSIRRMIKDYAAATNTTVGEFTHTQYNAGDRGVQQILDRRPSLIWGAYTEGLRPYATVLGCKWFTMVRHPIARLVSAFNYCGIVPSDQLCATRIHKPEDGDIYDFAEHWGNHGVVQFALAF----EDLNDILVTEVKS--PPWYKAKLYFEGRLGPSGKTSTSANISTKDVCQNVWMPEILQPVEELLRSKYAAVGILEQWETSMMLFDHALQLPGFNWTSTSASS--TPRNVHDSKAKNDLLVASMTDPVLKQILWLDILLYEHACSVHKAQLSRYGL 319
BLAST of mRNA_H-paniculata_contig7574.15561.1 vs. uniprot
Match: D8LU75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU75_ECTSI) HSP 1 Score: 157 bits (397), Expect = 6.400e-40 Identity = 91/284 (32.04%), Postives = 143/284 (50.35%), Query Frame = 3
Query: 189 LNKSGGSTIKHILS-RWSEKYTTYSSEPWKKGADFAAEQAKQLLGEELDFIAGGYAEGLRPFVNNRCKWFTIFRHPVPRLVSAYVYCHDHI-DQLCHTSEVNSSRVDLVTFAKHWGNFGVRQLALSLVNVTEVMDDAVATESQASMPGWYILKEYLERGGSALEVADGGVGERLPDRALYDMLTPARELLRLNYTAVGILEKFDETLDLFDRALGIPGLHWHKLYAKQG---QSNRDRHFATLKKKALAEAWVSAEVKQYIGLDLLLYEHAVDIFNEQKRIYGV 1025
++KSG S + + + +W + + + W++G FAA+ ++ + GG E LR CKW TIFRHP+ RL+SAY +C D +C +E L FA+ WGNF +RQ AL+ V+ + V + A +++ WY++KEYL RGG A D L L P + LL Y AVGI ++ T+ LF +AL + GL W +A G + +D + + + +A + + + LD+ LYEHAV +F +Q +G+
Sbjct: 1 MDKSGASGARRVATEQWRKDELVFDTVQWRRGDGFAAD----VMASRWKLLHGGCVESLRNHKGRSCKWITIFRHPIARLLSAYDHCLGAPKDPVCPPTESTG----LAAFAELWGNFAMRQFALAAVSPSAVKEWAAQRQARTGTSMWYLVKEYLARGGIA------------EDEVLGSKLEPVKGLLSTQYAAVGIAQELKTTMVLFSKALSMEGLDWSSSWATLGINEEDKQDSEYDITESEPFRQALENPRIVSALRLDMSLYEHAVHVFKDQVAQFGI 264
BLAST of mRNA_H-paniculata_contig7574.15561.1 vs. uniprot
Match: A0A6H5L061_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L061_9PHAE) HSP 1 Score: 142 bits (358), Expect = 6.220e-35 Identity = 78/220 (35.45%), Postives = 121/220 (55.00%), Query Frame = 3
Query: 402 FRHPVPRLVSAYVYCHDH-IDQLCHTSEVNSSRVDLVTFAKHWGNFGVRQLALSLVNVTEVMDDAVATESQASM-------PGWYILKEYLERGGSALE----VADGGVGERLPDRALYDMLTPARELLRLNYTAVGILEKFDETLDLFDRALGIPGLHWHKLYAKQGQSNRDRHFATLKKKALAEAWVSAEVKQYIGLDLLLYEHAVDIFNEQKRIYGV 1025
++ P+PRLVSAY YC + D+LC + + + DL TFAKHWGN+G+RQ +L+ V +D A E + + PGWY +KEY E + + + G D A+ +L P +LL NY+AVGILEK++ ++ LF++AL +P +W G+ N D+ + AL AW + + + LD+ LY+HAV + N+Q +G+
Sbjct: 18 YKCPIPRLVSAYFYCKQNGWDELCASMVLKAGNTDLHTFAKHWGNYGLRQFSLAFVGA----EDVFAAEQERGIDGRPVMFPGWYRVKEYFENQFDVEQERALMQETGASN---DLAMSYLLQPVEDLLSRNYSAVGILEKWETSMTLFNKALKVPSFNWQTASRNLGRKNVDKRLHDEEAHALRAAWDDPVLAKTLWLDIFLYDHAVAVHNKQVEEHGI 230 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7574.15561.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7574.15561.1 >prot_H-paniculata_contig7574.15561.1 ID=prot_H-paniculata_contig7574.15561.1|Name=mRNA_H-paniculata_contig7574.15561.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=334bp MMRRRTLLCGVVGMLLCGGVLLLYSYGGNKRATSVYMSARNQRMMDDQCWback to top mRNA from alignment at H-paniculata_contig7574:9282..11330+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7574.15561.1 ID=mRNA_H-paniculata_contig7574.15561.1|Name=mRNA_H-paniculata_contig7574.15561.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2049bp|location=Sequence derived from alignment at H-paniculata_contig7574:9282..11330+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7574:9282..11330+ >mRNA_H-paniculata_contig7574.15561.1 ID=mRNA_H-paniculata_contig7574.15561.1|Name=mRNA_H-paniculata_contig7574.15561.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2004bp|location=Sequence derived from alignment at H-paniculata_contig7574:9282..11330+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |