mRNA_H-paniculata_contig7503.15481.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7503.15481.1 vs. uniprot
Match: D7FS20_ECTSI (Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS20_ECTSI) HSP 1 Score: 142 bits (359), Expect = 1.640e-37 Identity = 68/93 (73.12%), Postives = 78/93 (83.87%), Query Frame = 1
Query: 4 GTSMSTPVVAGAASMARQYFREGWYNTGAKNISLGFDPSAALIKAALVNSAVAMDFAGVNPATSSIDISLDLPPDTHQGHGRVQMTNALNINS 282
GTSMSTP+VAG +MARQYFREGWYNTG+KN SLGFDPS AL+KA L+NSA M FAGVNP + ++D++L PPDTHQG GRV M NALNINS
Sbjct: 693 GTSMSTPIVAGNGAMARQYFREGWYNTGSKNESLGFDPSGALLKAVLINSATGMSFAGVNPDSGTLDVTLTTPPDTHQGFGRVTMINALNINS 785
BLAST of mRNA_H-paniculata_contig7503.15481.1 vs. uniprot
Match: A0A534MS53_9EURY (Peptidase_S8 domain-containing protein (Fragment) n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A534MS53_9EURY) HSP 1 Score: 78.2 bits (191), Expect = 1.730e-16 Identity = 43/89 (48.31%), Postives = 58/89 (65.17%), Query Frame = 1
Query: 4 GTSMSTPVVAGAASMARQYFREGWYNTGAKNISLGFDPSAALIKAALVNSAVAMDFAGVNPATSSIDISLDLPPDTHQGHGRVQMTNAL 270
GTSM+TP VAG+A + RQY+ +GWY TG+K + GF PSAALIKA ++NSA M AG + P+ +QG+GRV + +AL
Sbjct: 15 GTSMATPTVAGSAGLVRQYYMDGWYPTGSKTPANGFTPSAALIKATIINSAREMTGAGAYANGEN------KYPNDNQGYGRVALDDAL 97
BLAST of mRNA_H-paniculata_contig7503.15481.1 vs. uniprot
Match: C1EE69_MICCC (ATP-binding cassette superfamily n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EE69_MICCC) HSP 1 Score: 82.8 bits (203), Expect = 1.840e-16 Identity = 45/89 (50.56%), Postives = 58/89 (65.17%), Query Frame = 1
Query: 4 GTSMSTPVVAGAASMARQYFREGWYNTGAKNISLGFDPSAALIKAALVNSAVAMDFAGVNPATSSIDISLDLPPDTHQGHGRVQMTNAL 270
GTSM+TPV AGAA++ RQYF +G+Y TGA+ GF PSAALIKAAL+N A M + + + L+ PP QGHGRV + +L
Sbjct: 443 GTSMATPVAAGAAALIRQYFTDGFYPTGARTKGNGFAPSAALIKAALINGAEPMR------GFTELGLPLEPPPSVRQGHGRVHVGRSL 525
BLAST of mRNA_H-paniculata_contig7503.15481.1 vs. uniprot
Match: A0A059LB27_9CHLO (Peptidase_S8 domain-containing protein (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LB27_9CHLO) HSP 1 Score: 77.4 bits (189), Expect = 5.980e-16 Identity = 41/89 (46.07%), Postives = 60/89 (67.42%), Query Frame = 1
Query: 4 GTSMSTPVVAGAASMARQYFREGWYNTGAKNISLGFDPSAALIKAALVNSAVAMDFAGVNPATSSIDISLDLPPDTHQGHGRVQMTNAL 270
GTSM+TP+VAGAA++ RQY+ EG+Y +G +N S G+ PS+ALIKA L+ A ++ G+ A + +D PP QG GRV + ++L
Sbjct: 36 GTSMATPLVAGAAALVRQYYMEGYYPSGERNASAGWVPSSALIKATLIGGAASLS--GLEAANG---LPIDPPPSFRQGWGRVDLASSL 119
BLAST of mRNA_H-paniculata_contig7503.15481.1 vs. uniprot
Match: A0A5J4Y762_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y762_9CHLO) HSP 1 Score: 80.9 bits (198), Expect = 9.030e-16 Identity = 43/90 (47.78%), Postives = 57/90 (63.33%), Query Frame = 1
Query: 1 QGTSMSTPVVAGAASMARQYFREGWYNTGAKNISLGFDPSAALIKAALVNSAVAMDFAGVNPATSSIDISLDLPPDTHQGHGRVQMTNAL 270
+GTSMSTPVVAGA ++ RQYF EGWY TGA + + PS L+KA ++ AVAM + + + LD PP T QG GR+Q+ +L
Sbjct: 638 RGTSMSTPVVAGAVALVRQYFVEGWYPTGAAVAADAYTPSGPLLKAVMLGGAVAMTGLTPDEDPTKNGVPLDPPPSTRQGFGRMQLGASL 727
BLAST of mRNA_H-paniculata_contig7503.15481.1 vs. uniprot
Match: D7FS58_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS58_ECTSI) HSP 1 Score: 79.0 bits (193), Expect = 4.240e-15 Identity = 45/91 (49.45%), Postives = 59/91 (64.84%), Query Frame = 1
Query: 4 GTSMSTPVVAGAASMARQYFREGWYNTGAKNISLGFDPSAALIKAALVNSAVAMDFAGVNPATSSIDISLDLPPDTHQGHGRVQMTNALNI 276
GTSM+TPVVAGAA+M RQYF +GWY +G S F+PS AL+KA +V S AM + +S+ +L PPD QG GRV + + LN+
Sbjct: 508 GTSMATPVVAGAAAMIRQYFVQGWYPSGIATPSNIFNPSNALVKAMIVTSGTAM----ASYDSSAGSTTLGSPPDAIQGFGRVLLDSVLNV 594
BLAST of mRNA_H-paniculata_contig7503.15481.1 vs. uniprot
Match: A0A534MKK6_9EURY (Peptidase_S8 domain-containing protein (Fragment) n=2 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A534MKK6_9EURY) HSP 1 Score: 78.2 bits (191), Expect = 7.950e-15 Identity = 43/89 (48.31%), Postives = 58/89 (65.17%), Query Frame = 1
Query: 4 GTSMSTPVVAGAASMARQYFREGWYNTGAKNISLGFDPSAALIKAALVNSAVAMDFAGVNPATSSIDISLDLPPDTHQGHGRVQMTNAL 270
GTSM+TP VAG+A + RQY+ +GWY TG+K+ GF PSAALIKA ++NSA M+ AG + P+ +QG GRV + +AL
Sbjct: 575 GTSMATPTVAGSAGLVRQYYMDGWYPTGSKSAGDGFTPSAALIKATIINSAREMNGAGAYANGEN------KYPNDNQGFGRVTLDDAL 657
BLAST of mRNA_H-paniculata_contig7503.15481.1 vs. uniprot
Match: A0A534M4N4_9EURY (Uncharacterized protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A534M4N4_9EURY) HSP 1 Score: 77.8 bits (190), Expect = 1.100e-14 Identity = 43/89 (48.31%), Postives = 58/89 (65.17%), Query Frame = 1
Query: 4 GTSMSTPVVAGAASMARQYFREGWYNTGAKNISLGFDPSAALIKAALVNSAVAMDFAGVNPATSSIDISLDLPPDTHQGHGRVQMTNAL 270
GTSM+TP VAG+A + RQY+ +GWY TG+K+ + GF PSAALIKA ++NSA M AG + P+ +QG GRV + +AL
Sbjct: 575 GTSMATPTVAGSAGLVRQYYMDGWYPTGSKSATDGFTPSAALIKATIINSAREMTGAGAYANGEN------KYPNDNQGFGRVTLDDAL 657
BLAST of mRNA_H-paniculata_contig7503.15481.1 vs. uniprot
Match: A0A662EBV2_9BACT (Peptidase_S8 domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A662EBV2_9BACT) HSP 1 Score: 77.4 bits (189), Expect = 1.440e-14 Identity = 43/89 (48.31%), Postives = 56/89 (62.92%), Query Frame = 1
Query: 4 GTSMSTPVVAGAASMARQYFREGWYNTGAKNISLGFDPSAALIKAALVNSAVAMDFAGVNPATSSIDISLDLPPDTHQGHGRVQMTNAL 270
GTSM+TP VAG A++ RQYF EGW+ G +++ GF+PSAAL+KA LV SAV + G + S+D P QG G VQ+ AL
Sbjct: 452 GTSMATPTVAGLAALVRQYFMEGWFVFGRRDVERGFEPSAALVKAVLVASAVDLTTLGCS--------SIDSIPSRDQGWGLVQLDRAL 532
BLAST of mRNA_H-paniculata_contig7503.15481.1 vs. uniprot
Match: A0A7S0X079_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0X079_9CHLO) HSP 1 Score: 75.9 bits (185), Expect = 3.550e-14 Identity = 43/90 (47.78%), Postives = 59/90 (65.56%), Query Frame = 1
Query: 1 QGTSMSTPVVAGAASMARQYFREGWYNTGAKNISLGFDPSAALIKAALVNSAVAMDFAGVNPATSSIDISLDLPPDTHQGHGRVQMTNAL 270
+GTSM+TPVVAGAA++ARQYF EG+Y +G + GF+PSA+L++AALV A AM G + L PP QG GR+ ++ +L
Sbjct: 33 EGTSMATPVVAGAAALARQYFMEGFYPSGERTEGAGFEPSASLLRAALVAGAAAMR--GYSHTNGQ---PLQPPPSQFQGWGRLDLSRSL 117 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7503.15481.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7503.15481.1 >prot_H-paniculata_contig7503.15481.1 ID=prot_H-paniculata_contig7503.15481.1|Name=mRNA_H-paniculata_contig7503.15481.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=90bp MSTPVVAGAASMARQYFREGWYNTGAKNISLGFDPSAALIKAALVNSAVAback to top mRNA from alignment at H-paniculata_contig7503:10363..11149- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7503.15481.1 ID=mRNA_H-paniculata_contig7503.15481.1|Name=mRNA_H-paniculata_contig7503.15481.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=787bp|location=Sequence derived from alignment at H-paniculata_contig7503:10363..11149- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7503:10363..11149- >mRNA_H-paniculata_contig7503.15481.1 ID=mRNA_H-paniculata_contig7503.15481.1|Name=mRNA_H-paniculata_contig7503.15481.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=540bp|location=Sequence derived from alignment at H-paniculata_contig7503:10363..11149- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |