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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Model size | 1673 |
| Cds size | 1395 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7461.15444.1 >prot_H-paniculata_contig7461.15444.1 ID=prot_H-paniculata_contig7461.15444.1|Name=mRNA_H-paniculata_contig7461.15444.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=465bp
MERVLERGHGKSPGAMPHFGRIASEVVAKANKIKHREKNVDSSSTNGRKQ
PLTLNIVLHEWLEPRLTHSIAECSGGEGEEVTIFVGNEFFVDKKLLRERG
HVLVPTGGTKKACLPQMVACMTAVIAVKALQTEGLLPTVKDVPAANHHTD
HDDIHDHDVLVNMIVDGVAAHGVMASCLSEVRAATGAAVVMQQLRDDWES
RMPEAGGVEEIPATASQGGHEESLMHKIENLFVSSAMPDLPVDRKREFVE
ALEAYREELKNGRQPLLMDAEGVGTHSEKRRPPFYTYHKLNNALIVAVAS
DPGVVRGLRARTGGIGAAEPAAVFVVEGSHQLPNSADSVLSILATEAFLM
NLEQKNLPSTNQKRGQQEEPSETVIRPRIVPVDDDDSEHQEEQGREHMTV
LVGRDGVLQDLIEIGELNGVKMARVADLPHDRVRGRERARNIKRTDSYRK
TGRGVPRVPIGRRS* back to topmRNA from alignment at H-paniculata_contig7461:753..7508+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig7461.15444.1 ID=mRNA_H-paniculata_contig7461.15444.1|Name=mRNA_H-paniculata_contig7461.15444.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6756bp|location=Sequence derived from alignment at H-paniculata_contig7461:753..7508+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGAACATAACACGCTCGGCGAAGTAGAGCGGAGAGATATGGAGCGCGTGC
TCGAGCGTGGGCATGGGAAATCTCCGGGTGCAATGCCGCACTTCGGCAGG
ATAGCCTCGGAAGTGGTCGCGAAGGCAAATAAGGTTGAGGAAGTGGGGGA
AGGGCGGGTGAGGGGGCGAGTCCTTCTAAACTATGTATAGATCGTTACCA
AGGTCTTTCACGTGTGTTGATAAAGAAGCAGAGAGACAAACGTAGGAGCA
GACAACGTTATGAATTAAACCCTCTCCAACAAAAATCGAAGAATCGGGCC
CCGTACGTGTCTTGACCGAAATAGACCTTTGTGAAACATATGATGTATGC
TTGGAAGTACATATACATACCGTGAGAGGTGATAAACAACGAGCCAGGAA
AAAGACGAATAATTACACATGTACGCAGTTCAGATTGGCGCAGCATCCGT
GGGCGAACCGCGGTCACAAATGCGGAAAACTGCCTTTTGATTGTTATTCA
ATCTTCTCCTTTTTGTTTTTCCGTCAAGATGGCCTCAATCCCGATAAAGC
CAGCCCGTATTTGGCTCCCGAGAAATACTCAAGTGAGGCATGCTGTCATA
TTCAAGTCGTGCAGAAATTCTCAACGATTAAAAAAGAAAAAGTGCACAGG
TTCCGATTCGAACCCAATCGCATCGCATATAATCGGTCAAGTGCTTCTTT
TCCATCACTTGACCAAACACAAAATCTGTATGGTAGCTTATTCTCTATTT
TTTTTCTCTTGGGTCCCCTATCCCTCCCCCCACCCCGCGTGCCCGGTCTA
TCATATTTTTCTCTTTTCGAAAATCCCGGGTGGACACTTTTCGTCTCTTC
CTTTCGCTCTTCAAAATGTATTTCCGACTCTCGATCAAAGAGTGTTTTCG
GGGGAATCTTGTTTACTTTTGCTTGCTTGCTCGCTCTACGTGACATGCAT
TTTATGGTATGTGTACCTCATAATCGGATAGTGATGAATTAAACGTCAGA
ACTTGATACATGGCCCTCGAGGTAAAAAACTTGTATGTTTGTGCCTGTTT
TGCACCGCCGCAGATAAAACACCGAGAGAAAAATGTTGACAGTAGTAGCA
CTAACGGAAGAAAGCAACCCCTGACTCTGAATATCGTGCTACACGAGTGG
TTGGAGCCGCGATTGACACACAGCATCGCTGAGTGCAGCGGTGGTGAAGG
CGAGGAGGTGACAATTTTCGTTGGGAATGAATTTTTCGTGGACAAGAAGC
TGTTGCGCGAGAGAGGGCACGTGCTGGTGCCCACAGGAGGCACGAAAAAG
GCGTGCTTACCTCAGGTAATTTTTCAACAGATTGTTTTCGCCGCATGGTC
ATGACCTGTAGTGGCGATGAAAGCTTTTCGAAACGAAGTGGGGGGGTGGA
GGGAGGGACGGACGTGGCCTCAAGTCTCAGTCGTGCACGTTTTTATCAAC
AGCATTGAATTAAATCGGCGAGAAGGGGTCAATTCAGTTTTGAGCAAGCA
AGATATGGCAAGTACTTCGCGATTTTGAACCTTCCTTCGTATCGTCTTTT
TTCAACATTAGAAGTGCGATCAATTGCTCTCTCTCTCTCTACCTCTCTCT
GTCTCTCTGTCATCAGATGGTAGCCTGCATGACAGCCGTCATCGCGGTCA
AGGCCCTACAGACCGAGGGCCTGCTCCCTACAGTCAAAGACGTCCCGGCG
GCCAATCACCACACCGACCACGACGATATCCATGACCATGACGTACTCGT
GAACATGATCGTGGACGGTGTGGCTGCGCACGGGGTCATGGCCTCCTGCC
TGTCCGAAGTCCGGGCGGCAACCGGCGCCGCCGTAGTCATGCAACAGCTC
AGGGATGACTGGGAATCGCGCATGCCCGAAGCTGGCGGGGTGGAGGAAAT
ACCGGCGACCGCGTCACAGGGGGGGCACGAGGAGTCCTTGATGCACAAGA
TTGAGAATCTTTTCGTCTCGAGCGCCATGGTAAGTGCGCAGGGAAGGGAG
AAGGGGAGCGTGGGGAAAGGACAGGGAGGTTTTGAGGGGGGCGAATTATT
ATATACGTCACGTGAATCATGGCCGTGTATTTGTCCTGTTCGTTTATGTG
TGTATGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTTGGGGGGCGGGGGGA
GAAGGAGAGTCGTTGTGCGAGCAATCGGCATATATTCGAGCAGCAGCACT
GAACGGTGCGGTGCGGTGCGGTGCGGTGCGGTGCGATGCAGTGGGGTTTA
AATTGCCGTTGAAGAATTCATGAAGTTCGACTTGTGCTGGTCCAAATGGG
CATAATGCATGGTAGAAAAGACACCGGCGTCGTGAGACCTGTGAGAGTGA
TAAAAACTACCGTAGAAGGGAGGGGCGCGGGGGGGGGGAAAACGTGTTTT
TCGAAATCAATTTTTATCAAGAGCAAAGTCCATGTGTCTTCAAGAAATAA
GCACGTCCATCGACGGAAAGATTTTTCGATGAGATGGATCTTGCCAATGA
TCCAACTTTCGGTGTCCGCAGCACCGTACAGAAGTCTGCGAAAAAAATTG
GCTGTTAAAAATTGGTCGCCTCGGCGCTTTTGCACCGACTGCTCCCTTGT
ATGGTATTAAAGATAACTCTTGTGGATGTGTAATTGGGAGAAAAAACACA
ACCCGTATTGTTGGCAGACGAGGGAAGTACAATGTCAAAGCGCAAGGCTT
CTGTCTGCCTACCGACTGTCTATATCAACTATAAGTAGGTATACATTGAG
ACGATCATGGTTGGCTCGAAAGGTTGGGCTGTTGGCATGAAAAAGTTCCC
AAAACTATTTAACCACTTGATGAACACCTGCGCTGTACATATCCGAGTAG
GCACATTGCCGGAGTGTAAACGAAGTCATTTTAAAGAGTATGTATAGTAT
ATGTGTCCTCCTCCACCCTACCGCCCGTCCATCCATCTGTCCGCCCGCTT
GCCCTTCCGCCCGCGGCAGCCCGACCTACCGGTCGACAGGAAAAGGGAGT
TTGTAGAGGCACTGGAGGCATACCGCGAGGAGCTCAAGGTGAGAGCAACA
GTAGCAGTAGATGGACACACTTCTCCTTAATCTGACTTTTCAAATAGTTT
TCACACGAGGAGGCATTACGTACGTCTTTTTTCACATGACCATCTTATGA
GCCGGTTTGCGAATGGTCGTTGTGAGAGAGAAACGTTCGCCCACAGGGTC
GCGGTCCGTCACGTGTGTTTTGCTCGACAACCTAGGGCCGAAGCTTACTG
AGCAGGGCGGCGCGTGTACTGCGCCAAGTTGAAGGGGTCAACATAGGGGG
TTTTAGTGGGTGAAAATCCCACACTACCCTGAGCAAAGGGCGGGCGAACG
CTCAGGGTGCCTTCCCCACATGACAGCCGAAACGTTGTCTAGTCGGACCT
TCGGGCAACCGACACACGAACCCGAGTTTCGGGGTAAGTGTTGGGCACGG
GTTTCCTCCTCTCCTTTCAAGGACAAAAATAAAATAAAATTGCTCGACAA
CAATTCGGCTACACTTTTTGTGAATTTTACGGCCAAATTTTGAGCTAATA
TTTTTTTTTGTCACGTTAGCTTCTTTTTCAAAACAGCCCGTCAGTCCCGC
ACAGGGCCAGTTCTAGCGACTCCAAAAATATATAACAGGATTTTACGGCT
AGAATTTGGAAGAAAAGTCGAAAGTTACTTGAATTCAAAATCTTCCATGA
GGCCGAATGAAAAATATTGTGTCATGTCATCATCCACGAAATCGAATCCC
TGGAGAAAATATGGAAAAGTTTAACTATATTCACGTCCCACTCGATTTTT
CCAGATTTTTTTTAGGTTTCCATTATTTTCGCCGATAACCTGGCCGGTCG
CTAGGAACTGACCCGCAGTAATCTCATCAACTCTATTTTTCGAAGGAAAA
ATTGGAAAAACAAATAACTGGCTAGTCCTTTTCACGCCGATCAAGTTACT
TTTTTTTTACTTTTTGAGTCCTGGATGGATGCTTGGTGTGTGATATCTTG
TGGCACAAGGAACCCCCCCCTCCCCCTCCCGGACAAACACGAATACATGG
CGTACTCGACGTGATAGTTAGAAAATATTCGCCTGAGTTTCAGAATGAAC
GAATACATAGAATAAAGTACCCACCCCTGTCCATTCGATTCACGAGTATT
ATTAGCAGTCGTTGGGTGGTCCGGGACACATAGAATACACGAGCTCATTC
TGAAACTCAAGCGAATATTCTTTTTGTATTAGTCCGGGGAATTTCAAAGT
CCTGTGTCACAAGATGGGGGAGGGGGGGGGGCATTTTCGGGGCGGGGGGG
AACCTTTTGCGACGGACAAAATCTCTCGTTTACGGGTATGACCTTATACC
GCTCTTCCACAGGTATACTGCGAAATGTTTGGCATAATGTGACATAAAAT
GATAAAATATACTAAAATTCGTATAAAATTATGTGCCGTTATGTAATGAG
GAGGAGCGAAATGGGTAAAAATTGATCATTTTATTTTTAATCCTTGCAGA
TTGACGGCTAGTTTGCTGCAGTCGCAACGCCACGTTTGATGTGCTTGATT
TGGAGTTAGTACAGCTGACAGACTGCAGTACACACGTTGGTTTCATCGAG
TGGTGGCAGCCAGCTAGACGGTTCAAACAGCATGATACAGTCGGACAAGT
TACGCACGGCCACAGAAGAAGCAGGCACACAGTGAGTAGGATGTATGCAA
CACAGTCGTGTACTGCTGCAGCCACGAAGGTTTTTGAACTTCGTTACTAT
TTTCTGAATCACATCGGCCAATCAACACCCAACCTACTCTACTGTTACGT
TGGTTCCCACGGAATACCAAGATCTACACTCTACTACTACTACTACTACT
ACTACTACTACTACTATCACCAGTTAGTAAAAAGGATGGAAGCGTCTTCT
TGCCTAGGATCGTGCCGGCAGGTACCTGCATCAAAGTCATCATTCATTGG
GTACCCCCACTCCATTTTTCTGTCGATCTTTATTTTTAATCCGGCACAAT
ATTATTATATATACATATATTTGTTTGTTTCTGTTTGTTTCTGTTTGTTT
TTAATCCTGCATTACATATCTTTTGTTTTCTTTCTCCTTTTCTTTATTGT
TATTTTTTCTCTTTCTGTATTTTCCAAATTTCTTTCCTTCGTTTATTTTT
TGCGCAGAACGGGCGCCAGCCTCTGCTCATGGATGCGGAGGGTGTAGGCA
CTCACTCGGAGAAGAGGAGGCCCCCGTTCTACACCTATCACAAGCTGAAC
AACGCCTTGATCGTCGCCGTGGCGTCGGACCCGGGGGTTGTGAGGGGTCT
GAGGGTGAGCGAGGGGTCTCGTGTTCCCCCACCCTGAGGGCCATTCCTAT
TAGAAAAAATATATACTAAATCTAAGAATTTTCAATTTTTCAGCTCAAAT
ATGGGCCAAAAGTTATGTAAAAATATGAATATTTAAGATTTGCAGAAATG
CTTGGATAATATTAATACAATGGTTTGCAGCCAGTAGTTATTTTGGGTAA
ATTCTGGCTCTTGTTCGATGACTTGGAAATCTTGAAGTTTCGAGATTTCC
CAAATCTCCCCTCCGCTAGAAATGCCCTTAACATAGCAGGACGCAGTTAA
TTATTACTTCCTGTAACGTGAACAATGGCATTCGGCATACTGTGCGCTGG
AGTATGACACTGACATAGCCAACGGCGCTAGTTGGGTACCACAGTTTCAC
AGAGTTTAACATGGGAGGTAGTACTTGGGGGGGGAGGGGGGTGATGGTGA
ACTCGGGCATGATGCTATATTATATCCCGTCAATTACGGTACTTCTGTGC
GACCGACAATCACGCTGAAATGGTGCCGTAGGAGATGTTGGGTTATCGCC
GGGAGTGTGTTGGGTTGGTGCTCTTGGCGGGGTTCGTTATCATGGCATAC
GGGGTTGCGAGTTTTTGCAGGATTCCGTAAAACACTGTGTTATAGTGCCG
GGGTGCGAAACTCTCCCCCCTCCCCTCCCCCTATGTGTCTGCTGTCTCTA
TATGTGATTGTTGGCGTTTTGTTTTTGAAAAATCGCCAACAAAACAGGCA
CGAACCGGCGGCATCGGAGCCGCGGAGCCGGCGGCGGTTTTTGTGGTGGA
AGGGTCCCACCAATTACCGAACAGCGCAGATTCTGTACTGTCGATCCTCG
CCACGGAGGCTTTCTTGATGAACCTTGAGCAAAAAAACCTGCCGTCCACC
AACCAAAAGCGCGGTCAACAAGAAGAGCCTAGTGAAACTGTCATAAGACC
AAGAATCGTGCCGGTCGATGACGATGACAGCGAACATCAAGAAGAGCAAG
GAAGAGAACACATGACGGTTTTGGTGGGCAGGGATGGTGTGTTGCAAGAT
CTGATCGAAATCGGAGAATTGAACGGCGTGAAGATGGCGAGGGTGGCCGA
CTTGCCGCACGACAGGGTCCGGGGGAGAGAGAGGGCACGCAACATCAAGC
GCACCGATAGCTATCGGAAGACCGGTCGGGGAGTTCCTCGTGTTCCGATT
GGCCGACGGAGCTGAAAATAGTGTTGAAGATTGAGCCTCCCCCCCCAACT
TCGTCTTGTTTTTGGTGGATTTATGGAATCAGTCACCACTCAGCAGTGTT
AAAATGACTGTGAGCTTGGTCTGCTGAAAAGAGCACGCCGCTTTGATTTC
AGCTGGGCTACACAATGTCAGCATTGCGTGGGTACAACAATTTTACCTAC
CCCCCACCCCCCCGTCCCCCATCGCACCCCCCGCCTGCCCGTGGTCCATG
CGTGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig7461:753..7508+ >mRNA_H-paniculata_contig7461.15444.1 ID=mRNA_H-paniculata_contig7461.15444.1|Name=mRNA_H-paniculata_contig7461.15444.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2790bp|location=Sequence derived from alignment at H-paniculata_contig7461:753..7508+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGCGCGTGCTCGAGCGTGGGCATGGGAAATCTCCGGGTGCAATGCC
GCACTTCGGCAGGATAGCCTCGGAAGTGGTCGCGAAGGCAAATAAGATGG
AGCGCGTGCTCGAGCGTGGGCATGGGAAATCTCCGGGTGCAATGCCGCAC
TTCGGCAGGATAGCCTCGGAAGTGGTCGCGAAGGCAAATAAGATAAAACA
CCGAGAGAAAAATGTTGACAGTAGTAGCACTAACGGAAGAAAGCAACCCC
TGACTCTGAATATCGTGCTACACGAGTGGTTGGAGCCGCGATTGACACAC
AGCATCGCTGAGTGCAGCGGTGGTGAAGGCGAGGAGGTGACAATTTTCGT
TGGGAATGAATTTTTCGTGGACAAGAAGCTGTTGCGCGAGAGAGGGCACG
TGCTGGTGCCCACAGGAGGCACGAAAAAGGCGTGCTTACCTCAGATAAAA
CACCGAGAGAAAAATGTTGACAGTAGTAGCACTAACGGAAGAAAGCAACC
CCTGACTCTGAATATCGTGCTACACGAGTGGTTGGAGCCGCGATTGACAC
ACAGCATCGCTGAGTGCAGCGGTGGTGAAGGCGAGGAGGTGACAATTTTC
GTTGGGAATGAATTTTTCGTGGACAAGAAGCTGTTGCGCGAGAGAGGGCA
CGTGCTGGTGCCCACAGGAGGCACGAAAAAGGCGTGCTTACCTCAGATGG
TAGCCTGCATGACAGCCGTCATCGCGGTCAAGGCCCTACAGACCGAGGGC
CTGCTCCCTACAGTCAAAGACGTCCCGGCGGCCAATCACCACACCGACCA
CGACGATATCCATGACCATGACGTACTCGTGAACATGATCGTGGACGGTG
TGGCTGCGCACGGGGTCATGGCCTCCTGCCTGTCCGAAGTCCGGGCGGCA
ACCGGCGCCGCCGTAGTCATGCAACAGCTCAGGGATGACTGGGAATCGCG
CATGCCCGAAGCTGGCGGGGTGGAGGAAATACCGGCGACCGCGTCACAGG
GGGGGCACGAGGAGTCCTTGATGCACAAGATTGAGAATCTTTTCGTCTCG
AGCGCCATGATGGTAGCCTGCATGACAGCCGTCATCGCGGTCAAGGCCCT
ACAGACCGAGGGCCTGCTCCCTACAGTCAAAGACGTCCCGGCGGCCAATC
ACCACACCGACCACGACGATATCCATGACCATGACGTACTCGTGAACATG
ATCGTGGACGGTGTGGCTGCGCACGGGGTCATGGCCTCCTGCCTGTCCGA
AGTCCGGGCGGCAACCGGCGCCGCCGTAGTCATGCAACAGCTCAGGGATG
ACTGGGAATCGCGCATGCCCGAAGCTGGCGGGGTGGAGGAAATACCGGCG
ACCGCGTCACAGGGGGGGCACGAGGAGTCCTTGATGCACAAGATTGAGAA
TCTTTTCGTCTCGAGCGCCATGCCCGACCTACCGGTCGACAGGAAAAGGG
AGTTTGTAGAGGCACTGGAGGCATACCGCGAGGAGCTCAAGCCCGACCTA
CCGGTCGACAGGAAAAGGGAGTTTGTAGAGGCACTGGAGGCATACCGCGA
GGAGCTCAAGAACGGGCGCCAGCCTCTGCTCATGGATGCGGAGGGTGTAG
GCACTCACTCGGAGAAGAGGAGGCCCCCGTTCTACACCTATCACAAGCTG
AACAACGCCTTGATCGTCGCCGTGGCGTCGGACCCGGGGGTTGTGAGGGG
TCTGAGGAACGGGCGCCAGCCTCTGCTCATGGATGCGGAGGGTGTAGGCA
CTCACTCGGAGAAGAGGAGGCCCCCGTTCTACACCTATCACAAGCTGAAC
AACGCCTTGATCGTCGCCGTGGCGTCGGACCCGGGGGTTGTGAGGGGTCT
GAGGGCACGAACCGGCGGCATCGGAGCCGCGGAGCCGGCGGCGGTTTTTG
TGGTGGAAGGGTCCCACCAATTACCGAACAGCGCAGATTCTGTACTGTCG
ATCCTCGCCACGGAGGCTTTCTTGATGAACCTTGAGCAAAAAAACCTGCC
GTCCACCAACCAAAAGCGCGGTCAACAAGAAGAGCCTAGTGAAACTGTCA
TAAGACCAAGAATCGTGCCGGTCGATGACGATGACAGCGAACATCAAGAA
GAGCAAGGAAGAGAACACATGACGGTTTTGGTGGGCAGGGATGGTGTGTT
GCAAGATCTGATCGAAATCGGAGAATTGAACGGCGTGAAGATGGCGAGGG
TGGCCGACTTGCCGCACGACAGGGTCCGGGGGAGAGAGAGGGCACGCAAC
ATCAAGCGCACCGATAGCTATCGGAAGACCGGTCGGGGAGTTCCTCGTGT
TCCGATTGGCCGACGGAGCTGAGCACGAACCGGCGGCATCGGAGCCGCGG
AGCCGGCGGCGGTTTTTGTGGTGGAAGGGTCCCACCAATTACCGAACAGC
GCAGATTCTGTACTGTCGATCCTCGCCACGGAGGCTTTCTTGATGAACCT
TGAGCAAAAAAACCTGCCGTCCACCAACCAAAAGCGCGGTCAACAAGAAG
AGCCTAGTGAAACTGTCATAAGACCAAGAATCGTGCCGGTCGATGACGAT
GACAGCGAACATCAAGAAGAGCAAGGAAGAGAACACATGACGGTTTTGGT
GGGCAGGGATGGTGTGTTGCAAGATCTGATCGAAATCGGAGAATTGAACG
GCGTGAAGATGGCGAGGGTGGCCGACTTGCCGCACGACAGGGTCCGGGGG
AGAGAGAGGGCACGCAACATCAAGCGCACCGATAGCTATCGGAAGACCGG
TCGGGGAGTTCCTCGTGTTCCGATTGGCCGACGGAGCTGA back to top
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