mRNA_H-paniculata_contig7451.15430.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7451.15430.1 vs. uniprot
Match: A0A6H5JIC4_9PHAE (Ribos_L4_asso_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIC4_9PHAE) HSP 1 Score: 662 bits (1709), Expect = 2.360e-234 Identity = 339/379 (89.45%), Postives = 355/379 (93.67%), Query Frame = 1
Query: 1 MSARPVVSVFSAEGVAQEPTTLPAVFTVPIRPDIVNFVHTNMAKNHRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVQGGGTQRAGQGAFGNMCRSGRMFAPTKIWRRWHRHVNVNQKRYAVASALAATAVPALVMARGHRVEEVPEFPLVVDTSLESCTKTSAALATLKALGAESEMEKVKDSKKIRAGKGKMRNRRYVMRRGPLIIYEKSEGVHRAFRNLPGVETACVDRLNLLTLAPGGHMGRFCVWTQAAFDKLDSIYGTYTEKSAVKSGFQLPRHCMTSTDLNRIINSDEIQSVVRDPKPEEQVRKVALKVNPLKNRQAMLVLNPHHEARIAAQAEYQATQKANRKAVLKERRGRKAAGKAFYAKANLEGDVKF 1137
MSARPVVSVFS EGVAQE TTLPAVFTVPIRPD+VNFVHTNMAKNHRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVQGGGTQRAGQGAFGNMCR GRMF+PTKIWRRWHRHVNVNQKRYAVASALAATAVPALVMARGHRVEEVPE PLVVDTSLE+C+KT+AALATL ALGA +E+EKVKDSKKIRAGKGKMRNRRYVMRRGPL+IY+KSEG+ RAFRNLPGVETACVDRLNLLTLAPGGHMGRFCVWTQAAFDKLDSIYGTYTEKS VKS FQLPRHCMT+TDLNRIINSDEIQSVV DPKPE QVR+VA KVNPLKNR ML LNP+H+ARIAAQ Q KA RKAVLKERRGRK A +AF+AKANLEGDVKF
Sbjct: 1 MSARPVVSVFSQEGVAQESTTLPAVFTVPIRPDVVNFVHTNMAKNHRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVQGGGTQRAGQGAFGNMCRGGRMFSPTKIWRRWHRHVNVNQKRYAVASALAATAVPALVMARGHRVEEVPELPLVVDTSLETCSKTAAALATLTALGAAAEVEKVKDSKKIRAGKGKMRNRRYVMRRGPLVIYDKSEGISRAFRNLPGVETACVDRLNLLTLAPGGHMGRFCVWTQAAFDKLDSIYGTYTEKSDVKSNFQLPRHCMTNTDLNRIINSDEIQSVVNDPKPEAQVRRVARKVNPLKNRGVMLSLNPYHDARIAAQQAQQEANKAGRKAVLKERRGRKTARRAFHAKANLEGDVKF 379
BLAST of mRNA_H-paniculata_contig7451.15430.1 vs. uniprot
Match: A0A836CFT4_9STRA (Ribosomal protein L4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFT4_9STRA) HSP 1 Score: 491 bits (1265), Expect = 6.890e-167 Identity = 265/391 (67.77%), Postives = 304/391 (77.75%), Query Frame = 1
Query: 1 MSARPVVSVFSAEGVAQEPT-TLPAVFTVPIRPDIVNFVHTNMAKNHRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVQGGGTQRAGQGAFGNMCRSGRMFAPTKIWRRWHRHVNVNQKRYAVASALAATAVPALVMARGHRVEEVPEFPLVVDTSLESCTKTSAALATLKALGAESEMEKVKDSKKIRAGKGKMRNRRYVMRRGPLIIYEKSEGVHRAFRNLPGVETACVDRLNLLTLAPGGHMGRFCVWTQAAFDKLDSIYGTYTEKSAVKSGFQLPRHCMTSTDLNRIINSDEIQSVVRDPKPEEQVRKVALKVNPLKNRQAMLVLNPH-----------HEARIAAQAEYQATQKANRKAVLKERRGRKAAGKAFYAKANLEGDVKF 1137
M+ARP VSVFS E A T TLP V T PIRPDIVNFVHTNMAKN RQ YAVSK+AGHQTSAESWGTGRAVSRIPRV GGGTQR+GQGAFGNMCR GRMFAPTKIWRRWHR +NVNQKRYAVASALAA+AVPALVMARGH+V EVPE PLVVD SL+S KTS A+ L LGA ++++K K+SKKIRAGKGKMRNRRYV+RRGPL+IY +S+G+ +AFRNL GVETACVDRLNLL LAPGGHMGRFCVWTQAAF++LD++YGTY EK A KSG+ LPR MT+ D+ RIINS E+QSV+R +PE Q + K N LKN + L+P+ E R +AE AT++A KA ++ KA G+AFY AN EG VKF
Sbjct: 1 MAARPTVSVFSIESGASTGTVTLPCVMTAPIRPDIVNFVHTNMAKNSRQAYAVSKKAGHQTSAESWGTGRAVSRIPRVGGGGTQRSGQGAFGNMCRGGRMFAPTKIWRRWHRRINVNQKRYAVASALAASAVPALVMARGHKVHEVPELPLVVDNSLQSLKKTSDAIKALAKLGAAADVDKAKNSKKIRAGKGKMRNRRYVLRRGPLVIYAESDGLQKAFRNLAGVETACVDRLNLLQLAPGGHMGRFCVWTQAAFERLDAVYGTYAEKGA-KSGYTLPRQQMTNADVARIINSTEVQSVLRAARPEAQRHMLPRKKNALKNLGVLERLSPYAAHARKAATKAQEERKGKRAELLATKRAAAKAQRPAKKALKAQGRAFYEAANQEGSVKF 390
BLAST of mRNA_H-paniculata_contig7451.15430.1 vs. uniprot
Match: A0A7S2UWI4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWI4_9STRA) HSP 1 Score: 476 bits (1224), Expect = 1.280e-160 Identity = 260/394 (65.99%), Postives = 306/394 (77.66%), Query Frame = 1
Query: 4 SARPVVSVFSAEGVAQEP--TTLPAVFTVPIRPDIVNFVHTNMAKNHRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVQGGGTQRAGQGAFGNMCRSGRMFAPTKIWRRWHRHVNVNQKRYAVASALAATAVPALVMARGHRVEEVPEFPLVVDTSLESCTKTSAALATLKALGAESEMEKVKDSKKIRAGKGKMRNRRYVMRRGPLIIYEKSE--GVHRAFRNLPGVETACVDRLNLLTLAPGGHMGRFCVWTQAAFDKLDSIYGTYTEKSAVKSGFQLPRHCMTSTDLNRIINSDEIQSVVRDPKPEEQVRKVALKVNPLKNRQAMLVLNPH-----------HEARIAAQAEYQATQKANRKAVLKER---RGRKAAGKAFYAKANLEGDV 1131
++RPVVSVFSAE Q TTLP V T PIRPDIV FVHTN+AKN+RQPYAVSK+AGHQTSAESWGTGRAVSRIPRVQGGGTQRAGQGAFGNMCR GRMFAPTKIWRRWHR+VNVNQ+RYAVASALAA+A+PALVMARGH+++EVPE PLVVDT ++ KT+ A L+ LGA+++++K+K +KK+RAGKGK+RNRR+V RRGPL++Y+ SE + A RNLPGVE A VD LNLLTLAPGGHMGRF VWTQAAFDKLD++YGTY KS++K G+ LPRH M + DL+R+INSDEIQSVVR P + R V K NPLKN M +NP+ EAR A+AE A A R+ LK++ + KA KAFY KAN EGDV
Sbjct: 5 ASRPVVSVFSAEDPTQVKGTTTLPVVMTAPIRPDIVQFVHTNLAKNNRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVQGGGTQRAGQGAFGNMCRGGRMFAPTKIWRRWHRNVNVNQRRYAVASALAASALPALVMARGHKIDEVPELPLVVDTDAQALKKTAKARKLLETLGAKADLDKIKATKKLRAGKGKLRNRRFVQRRGPLVVYDASEEGSIALAVRNLPGVECARVDSLNLLTLAPGGHMGRFIVWTQAAFDKLDALYGTYDAKSSMKKGYSLPRHVMANADLSRLINSDEIQSVVR-PAEAKSKRTVPRKKNPLKNLGVMARINPYAVAARRSEYRAQEARKTAKAEQIA---AKRQMALKKKAASKAGKAERKAFYEKANKEGDV 394
BLAST of mRNA_H-paniculata_contig7451.15430.1 vs. uniprot
Match: A0A6P8IGA8_ACTTE (60S ribosomal protein L4-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IGA8_ACTTE) HSP 1 Score: 451 bits (1160), Expect = 1.660e-151 Identity = 229/361 (63.43%), Postives = 290/361 (80.33%), Query Frame = 1
Query: 1 MSARPVVSVFSAEGVAQEPTTLPAVFTVPIRPDIVNFVHTNMAKNHRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVQGGGTQRAGQGAFGNMCRSGRMFAPTKIWRRWHRHVNVNQKRYAVASALAATAVPALVMARGHRVEEVPEFPLVVDTSLESCTKTSAALATLKALGAESEMEKVKDSKKIRAGKGKMRNRRYVMRRGPLIIYEKSEGVHRAFRNLPGVETACVDRLNLLTLAPGGHMGRFCVWTQAAFDKLDSIYGTYTEKSAVKSGFQLPRHCMTSTDLNRIINSDEIQSVVRDPKPEEQVRKVALKVNPLKNRQAMLVLNPHHEARIAAQAEYQATQKANRKAVLKERRGRK 1083
M+ARPV++VF+ G TTLPAVF PIRPD+V+FVH+NM+KN RQPYAV+K AGHQTSAESWGTGRAV+RIPRV+GGGT R+GQGAFGNMCR GRMFAPTK WRRWHR +NVNQ+R+A+ SALAA+A+PAL+M+RGHR+E + E PLVV S+ES TKTSAAL LKA+ A +++EK K+SKK+RAGKGK+RNRR VMR+GPLIIY + +G+ +AFRNLPGV+ VDRLNLL L PGGH+GRF +W+Q AF+KLD +YGT+ ++S+ K+ + LPR MT++DLNR+INSDE+QSVVR KP + R+ LK NPLKN ML LNPH ++ A+ +KA + A+L ++RG K
Sbjct: 1 MAARPVITVFNENGEKGGQTTLPAVFKAPIRPDVVSFVHSNMSKNKRQPYAVNKLAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRKINVNQRRFAMCSALAASALPALIMSRGHRIENIEEVPLVVADSIESVTKTSAALKLLKAINAYNDVEKCKESKKVRAGKGKLRNRRTVMRKGPLIIYNQDQGIRQAFRNLPGVDLLQVDRLNLLKLCPGGHLGRFIIWSQGAFEKLDGLYGTWKKQSSEKNSYNLPRPMMTNSDLNRLINSDEVQSVVRPTKP--RGRRAPLKKNPLKNLGVMLRLNPHAKSTKRAEILTVERRKAAKAALLAKKRGTK 359
BLAST of mRNA_H-paniculata_contig7451.15430.1 vs. uniprot
Match: F0Y8N1_AURAN (Ribos_L4_asso_C domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8N1_AURAN) HSP 1 Score: 449 bits (1155), Expect = 1.900e-150 Identity = 243/376 (64.63%), Postives = 286/376 (76.06%), Query Frame = 1
Query: 10 RPVVSVFSAEGVAQEPTTLPAVFTVPIRPDIVNFVHTNMAKNHRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVQGGGTQRAGQGAFGNMCRSGRMFAPTKIWRRWHRHVNVNQKRYAVASALAATAVPALVMARGHRVEEVPEFPLVVDTSLE-SCTKTSAALATLKALGAESEMEKVKDSKKIRAGKGKMRNRRYVMRRGPLIIYE-KSEGVHRAFRNLPGVETACVDRLNLLTLAPGGHMGRFCVWTQAAFDKLDSIYGTYTEKSAVKSGFQLPRHCMTSTDLNRIINSDEIQSVVRDPKPEEQVRKVALKVNPLKNRQAMLVLNPHHEARIAAQAEYQATQKANRKAVLKERRGRKAAGKAFYAKANLEGDV 1131
RPVVSV+S EG T LPAVF PIRPD+V FVHTN+AKN RQ YAV+ +AGHQTSAESWGTGRAVSRIPRVQGGGTQR+GQGAFGNMCR GRMFAPTK WR+WHR VN+N++RYA+ SA+AA+A P LVMARGH V+ VPE PLVVD S+E S KT AA+A LKALGAE++ +K SKK+RAGKGKMRNRRYV R+GPL+IYE K + RA RNLPGV+ +DRLNLL LAPGGH+GRFCVWT AF KLD++YG KS +K + LPR CM + DL R+INSDEIQSVVR P ++ R A K NPLK AML LNP+HE A++ QK ++A + + RKAA KAFY KA +EG+V
Sbjct: 5 RPVVSVYSPEGAVASTTPLPAVFNAPIRPDLVRFVHTNIAKNARQAYAVNMKAGHQTSAESWGTGRAVSRIPRVQGGGTQRSGQGAFGNMCRGGRMFAPTKTWRKWHRKVNLNERRYAICSAIAASACPPLVMARGHVVDAVPEMPLVVDGSVEGSVAKTKAAVALLKALGAEADADKCAASKKLRAGKGKMRNRRYVGRKGPLVIYEDKDAELPRAVRNLPGVDLCHIDRLNLLLLAPGGHVGRFCVWTSGAFAKLDALYGGVGVKSELKKDYSLPRPCMLNADLARLINSDEIQSVVR-PAEKDTQRPKAPKRNPLKCLDAMLALNPYHEVHRASEMRAAKAQKKAKQAKVD--KNRKAASKAFYEKACVEGEV 377
BLAST of mRNA_H-paniculata_contig7451.15430.1 vs. uniprot
Match: A0A7J7Q3B7_9CHLO (Component of cytosolic 80S ribosome and 60S large subunit n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q3B7_9CHLO) HSP 1 Score: 448 bits (1153), Expect = 9.380e-150 Identity = 240/389 (61.70%), Postives = 293/389 (75.32%), Query Frame = 1
Query: 4 SARPVVSVFSAEGVAQEPTTLPAVFTVPIRPDIVNFVHTNMAKNHRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVQGGGTQRAGQGAFGNMCRSGRMFAPTKIWRRWHRHVNVNQKRYAVASALAATAVPALVMARGHRVEEVPEFPLVVDTSLESCTKTSAALATLKALGAESEMEKVKDSKKIRAGKGKMRNRRYVMRRGPLIIYEKSEGVHRAFRNLPGVETACVDRLNLLTLAPGGHMGRFCVWTQAAFDKLDSIYGTYTEKSAVKSGFQLPRHCMTSTDLNRIINSDEIQSVVRDPKPEEQVRKVALKVNPLKNRQAMLVLNPHH-EARIAA--QAEYQATQKANRKAVL---------KERRGRKAAGKAFYAKANLEGDVK 1134
+ARP+VSV +G A E TTLPAVF+ PIRPDIV VHTNM KNHRQPYAVS +AGH T+AESWGTGRAVSRIPRV GGGT RAGQGAFGNMCR G MFAPTK WRRWHR +N+NQKRYAVASALAA+ +PALVMARGHR+E+V E PLVV + ES TKTS AL LKA+GA+++ EK +DSK IR GKGKMRNRRYV+R+GPL++Y G+ +AFRNLPGVE A VD LNLL LAPGGH+GRF ++T++AFD+LD I+G+ T S VK G++LPR CMT+ D+ R+INSDE+QSVV PK E + ALK NPLKN AM+ LNP AR +A +E +A ++A R A L K + ++A K FY + ++ + +
Sbjct: 3 AARPMVSVQGLDGTAAEQTTLPAVFSAPIRPDIVRTVHTNMNKNHRQPYAVSMKAGHNTAAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGHMFAPTKTWRRWHRKININQKRYAVASALAASGLPALVMARGHRIEQVAEVPLVVSDAAESITKTSKALELLKAVGADADTEKARDSKAIRRGKGKMRNRRYVLRKGPLVVYGADNGISKAFRNLPGVEVASVDALNLLQLAPGGHLGRFVIFTKSAFDRLDKIFGSTTTASEVKKGYKLPRACMTNADVTRLINSDEVQSVVNAPK-ESGAKHYALKKNPLKNLGAMVKLNPQAASARRSAILLSERRAKERAERLAKLRAGQPTGAPKRSKEQQAVAKKFYGQLVVDSEYQ 390
BLAST of mRNA_H-paniculata_contig7451.15430.1 vs. uniprot
Match: A0A4D9D8J9_9STRA (Ribos_L4_asso_C domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8J9_9STRA) HSP 1 Score: 446 bits (1147), Expect = 3.270e-149 Identity = 242/383 (63.19%), Postives = 287/383 (74.93%), Query Frame = 1
Query: 4 SARPVVSVFSAEGVAQEPTTLPAVFTVPIRPDIVNFVHTNMAKNHRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVQGGGTQRAGQGAFGNMCRSGRMFAPTKIWRRWHRHVNVNQKRYAVASALAATAVPALVMARGHRVEEVPEFPLVVDTSLESCTKTSAALATLKALGAESEMEKVKDSKKIRAGKGKMRNRRYVMRRGPLIIYEKSE-GVHRAFRNLPGVETACVDRLNLLTLAPGGHMGRFCVWTQAAFDKLDSIYGTYTEKSAVKSGFQLPRHCMTSTDLNRIINSDEIQSVVRDPKPEEQVRKVALKVNPLKNRQAMLVLNP----HHEARIAAQAEYQATQKANRKAVLKERRGRKAAGKAFYAKANLEGDVKF 1137
+ARP VSV++ EG + LPAV T PIRPD+VNFV T + KNHRQPYAVS++AGHQTSAESWGTGRAV+RIPRV GGGTQR+GQGAFGNMCRSGRMFAPTKIWRRWHR +N+ QKRYAVASALAA+AVPALVMARGHRV+ V E P V+D S KT+ A+ L ALG E++K KDSKKIRAGKGKMRNRRYV+RRGPL+IY E GV +A RN+ GVE A VDRLNLL LAPGGH+GRFC+WT+ AF++LD+++GT TEKS VK + LPR M + DL RIINS+E+QSVVR P E VR + K NPLKN AM+ +NP H + A + K + RKAAG+AFY +A+ EGD+KF
Sbjct: 3 AARPQVSVYNVEGASVAEVPLPAVLTAPIRPDVVNFVFTGLNKNHRQPYAVSEKAGHQTSAESWGTGRAVARIPRVGGGGTQRSGQGAFGNMCRSGRMFAPTKIWRRWHRKINITQKRYAVASALAASAVPALVMARGHRVDGVAEIPFVLDESFAKVDKTAQAVKVLGALGVGPELDKSKDSKKIRAGKGKMRNRRYVLRRGPLVIYSTGEEGVVKAVRNIVGVEAAHVDRLNLLQLAPGGHLGRFCIWTRGAFERLDAVFGTQTEKSQVKLDYVLPRAPMANADLARIINSEEVQSVVR-PAVTETVR-LPRKKNPLKNLAAMVRMNPYVLVHRRQELKRMAAAAGAKXXXXXXXXK--KARKAAGRAFYEQASKEGDIKF 381
BLAST of mRNA_H-paniculata_contig7451.15430.1 vs. uniprot
Match: A0A7M5X9R0_9CNID (Ribos_L4_asso_C domain-containing protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5X9R0_9CNID) HSP 1 Score: 445 bits (1144), Expect = 4.610e-149 Identity = 230/373 (61.66%), Postives = 278/373 (74.53%), Query Frame = 1
Query: 1 MSARPVVSVFSAEGVAQEPTTLPAVFTVPIRPDIVNFVHTNMAKNHRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVQGGGTQRAGQGAFGNMCRSGRMFAPTKIWRRWHRHVNVNQKRYAVASALAATAVPALVMARGHRVEEVPEFPLVVDTSLESCTKTSAALATLKALGAESEMEKVKDSKKIRAGKGKMRNRRYVMRRGPLIIYEKSEGVHRAFRNLPGVETACVDRLNLLTLAPGGHMGRFCVWTQAAFDKLDSIYGTYTEKSAVKSGFQLPRHCMTSTDLNRIINSDEIQSVVRDPKPEEQVRKVALKVNPLKNRQAMLVLNPHHEARIAAQAEYQATQKANRKAVLKERRGRKAAGKAFYAKANL 1119
M+ARP+VSVF+ +G TLPAVF PIR DIVNFVHTNMAKN RQPYAV K AGHQTSAESWGTGRAV+RIPRV+GGGT R+GQGAFGNMCR GRMFAPTK WRRWHR +N NQ+RYAV SA+AA+A+P LVMARGH+++ +PE P+V ++ES TKT +A+A LK + A +++K +DSKK+RAGKGKMRNRRY MRRGPL++Y + G+ +AFRNLPGVET VDRLNLL L PGGH+GR C+W++ AF KLDSIYGT+ + S K+ F LPRH M DL RIINSDEIQSVVR KP + R+ +K NPLKN M LNPH AR+ +A A++ + R A KA AK +
Sbjct: 1 MAARPLVSVFNEQGDVSSQVTLPAVFKAPIRSDIVNFVHTNMAKNSRQPYAVHKHAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRPINQNQRRYAVCSAVAASALPPLVMARGHKIDGIPEVPVVCSNAIESFTKTKSAVALLKKINAYDDVQKCQDSKKVRAGKGKMRNRRYTMRRGPLVVYNEDHGIQQAFRNLPGVETISVDRLNLLKLCPGGHLGRLCIWSEGAFKKLDSIYGTWRKPSTQKTNFNLPRHKMAMPDLARIINSDEIQSVVRPVKP--RARRATIKKNPLKNSAIMSRLNPH--ARVTKRA-----------AIVAQERRAAAKDKALDAKRGI 358
BLAST of mRNA_H-paniculata_contig7451.15430.1 vs. uniprot
Match: UPI000A2A4595 (60S ribosomal protein L4 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A4595) HSP 1 Score: 442 bits (1137), Expect = 4.880e-148 Identity = 227/361 (62.88%), Postives = 281/361 (77.84%), Query Frame = 1
Query: 1 MSARPVVSVFSAEGVAQEPTTLPAVFTVPIRPDIVNFVHTNMAKNHRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVQGGGTQRAGQGAFGNMCRSGRMFAPTKIWRRWHRHVNVNQKRYAVASALAATAVPALVMARGHRVEEVPEFPLVVDTSLESCTKTSAALATLKALGAESEMEKVKDSKKIRAGKGKMRNRRYVMRRGPLIIYEKSEGVHRAFRNLPGVETACVDRLNLLTLAPGGHMGRFCVWTQAAFDKLDSIYGTYTEKSAVKSGFQLPRHCMTSTDLNRIINSDEIQSVVRDPKPEEQVRKVALKVNPLKNRQAMLVLNPHHEARIAAQAEYQATQKANRKAVLKERRGRK 1083
M+ARPVVS+F+ G TTLPAV PIRPD+V FVH++M+KN RQPY+V+K AGHQTSAESWGTGRAV+RIPRV+GGGT R+GQGAFGNMCR GRMFAPTK WRRWHR +NVNQ+R+A SALAA+A+PALVM+RGHR+E + E PLVV S+ESCTKTS A+ LKA+ A ++EK KDSKKIRAGKGK+RNRR MR+GPL+IY + +G+ +AFRNLPGV+ VDRLNLL L PGGH+GRF VW+Q AF+KLDS+YGT+ + S KS + LPR M ++DLNR+INSDEIQSVVR K + ++ LK NPLKN ML LNPH ++ A+ +KA + +L ++RG K
Sbjct: 1 MAARPVVSIFNENGECCGQTTLPAVLKAPIRPDVVTFVHSDMSKNKRQPYSVNKLAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRKINVNQRRFATCSALAASAIPALVMSRGHRIENIDEVPLVVSDSMESCTKTSGAVKLLKAIHAYEDVEKCKDSKKIRAGKGKLRNRRTTMRKGPLVIYNQDQGIRQAFRNLPGVDLLQVDRLNLLKLCPGGHVGRFIVWSQGAFEKLDSLYGTWKKASTEKSNYNLPRPMMANSDLNRLINSDEIQSVVRPAKL--KTKRTGLKKNPLKNLGVMLRLNPHAKSTKRAEMLTVERRKAAKADLLAKKRGTK 359
BLAST of mRNA_H-paniculata_contig7451.15430.1 vs. uniprot
Match: A0A1X6NKA5_PORUM (Ribos_L4_asso_C domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NKA5_PORUM) HSP 1 Score: 441 bits (1135), Expect = 1.170e-147 Identity = 239/365 (65.48%), Postives = 278/365 (76.16%), Query Frame = 1
Query: 10 RPVVSVFSAEGVAQEPTTLPAVFTVPIRPDIVNFVHTNMAKNHRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVQGGGTQRAGQGAFGNMCRSGRMFAPTKIWRRWHRHVNVNQKRYAVASALAATAVPALVMARGHRVEEVPEFPLVVDTSLESCTKTSAALATLKALGAESEMEKVKDSKKIRAGKGKMRNRRYVMRRGPLIIYEKSEGVHRAFRNLPGVETACVDRLNLLTLAPGGHMGRFCVWTQAAFDKLDSIYGTYTEKSAVKSGFQLPRHCMTSTDLNRIINSDEIQSVVRDPKPEEQVRKVALKVNPLKNRQAMLVLNPHHEARIAAQAEYQATQKANRKAVLKERRGRKAAGKAFY 1104
RP VSV S G A +PAVFT PIRPD+V VHT+MAKN RQPYAVSK AG QTSAESWGTGRAVSRIPRV GGGT R+GQGAFGNMCR GRMF+PTKIWR+WHR + VNQ+RYAV SALAA+A+PALVMARGH+++ VPE PLVV E KT+AA+A LK LGA S++ KVK SKKIR GKGKMRNRRYV RRGPLIIYEK G+ +AFRNLPGV+T CVDRLNLL LAPGGH+GRFCVWT+ A KLD+IYGT TE + +KSG+ LP+ M ++DL R+INSDE+Q+VVR PK + + V K NPLKN+ ML LNP A A+ T+K ++K KE KA GK FY
Sbjct: 5 RPTVSVHSTAGEASGSLPMPAVFTAPIRPDVVRSVHTSMAKNKRQPYAVSKMAGMQTSAESWGTGRAVSRIPRVPGGGTHRSGQGAFGNMCRGGRMFSPTKIWRKWHRKIAVNQRRYAVVSALAASALPALVMARGHKIDHVPEVPLVVSAEAEDVAKTAAAVALLKTLGANSDLNKVKASKKIRPGKGKMRNRRYVQRRGPLIIYEKDGGIVKAFRNLPGVDTCCVDRLNLLQLAPGGHVGRFCVWTEGAVAKLDAIYGTATEGAQLKSGYTLPKSMMANSDLVRLINSDEVQAVVR-PKAQRPMY-VPRKKNPLKNKALMLKLNP-----AALIAKPTGTEKRDKKKPSKEV---KAIGKKFY 359 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7451.15430.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7451.15430.1 >prot_H-paniculata_contig7451.15430.1 ID=prot_H-paniculata_contig7451.15430.1|Name=mRNA_H-paniculata_contig7451.15430.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=380bp MSARPVVSVFSAEGVAQEPTTLPAVFTVPIRPDIVNFVHTNMAKNHRQPYback to top mRNA from alignment at H-paniculata_contig7451:565..5927- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7451.15430.1 ID=mRNA_H-paniculata_contig7451.15430.1|Name=mRNA_H-paniculata_contig7451.15430.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5363bp|location=Sequence derived from alignment at H-paniculata_contig7451:565..5927- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7451:565..5927- >mRNA_H-paniculata_contig7451.15430.1 ID=mRNA_H-paniculata_contig7451.15430.1|Name=mRNA_H-paniculata_contig7451.15430.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2280bp|location=Sequence derived from alignment at H-paniculata_contig7451:565..5927- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |