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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 2111 |
| Cds size | 1554 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7411.15394.1 >prot_H-paniculata_contig7411.15394.1 ID=prot_H-paniculata_contig7411.15394.1|Name=mRNA_H-paniculata_contig7411.15394.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=518bp
MPSARDSETRANNFLTPGGSLAPLPGVAVKESTSASEKCAVENDGDKDGI
APPKLADAIAGVGISVSERRSKKVGSDGGCGDGGMTRSGSLLSRNSSHCT
SGFIIKECVHSSRGESGSRQRRTKRRSSSRVSGGGDGDARIASAGSNPYT
SSSFSSLASTVSTTTDPGDPESQTRTLSPTNSVDSGHTNPLESRVPRDEN
IERNTGSSNGIKGSSIRNSSNNNDNNNDAGQSGIYPSTAHAWGGDDPRAD
TNAQQLATIKQHQQRLQQQQQQASSRIDKSSITAVTGAADATRDGVPVAG
SGLVPFEEGRSAVAGNGGSTNRRRSVSRSSDTALQPPKDCTLGSGEGRKV
GGGGDGGSRGGNKEQRSDVPVDVKDGGDHKSHADLKGIGSGVSSASGSSF
CSSRTDGYSDEESDMSRLSSSYSGGGEDSGSVGDSSFSDDYGSFSDSVSN
ASGETPADTDSCRSRSPRYHGGSVSLNSAGGLSGTCRRNCWRGRRGWRWQ
WQRQTVVENELLERRSF* back to topmRNA from alignment at H-paniculata_contig7411:7819..11174- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig7411.15394.1 ID=mRNA_H-paniculata_contig7411.15394.1|Name=mRNA_H-paniculata_contig7411.15394.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3356bp|location=Sequence derived from alignment at H-paniculata_contig7411:7819..11174- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGCAGCAGTTGGTTCGAGAGTATGCCCAGTGCCCGCGACAGCGAGACGC
GAGCCAACAATTTCCTCACCCCCGGTGGAAGCCTAGCACCACTACCTGGC
GTGGCTGTCAAGGAAAGTACAAGCGCGAGCGAAAAGTGCGCCGTAGAAAA
TGACGGCGACAAAGATGGAATAGCACCGCCAAAGCTGGCAGACGCTATCG
CAGGAGTAGGCATATCCGTTTCCGAGCGGCGAAGTAAAAAAGTGGGGAGC
GACGGTGGGTGTGGGGATGGCGGCATGACAAGAAGCGGGAGTCTGCTGAG
CAGGAATAGCAGCCACTGTACATCTGGTTTTATAATCAAGGAGTGTGTCC
ACTCGAGCAGGGGGGAGAGCGGCAGCAGGCAGCGCAGGTTAGCGATCTAT
TTGAAAATATTAATCGTTAGAGTGCGCCTTCGGCATTCGCCCTGTGGGCC
CACTTGGAGAATTAACCTGAACTGATTTATGGCCCGGTCGCGGCCCCAGT
TATCACGAAGGAACTGCCGGGATTCATGTTTGCCATCCCCTCTACCCTCC
CTTGCTCTCTTTAGCTCTCTTTGGCTCCACGCGTTACTACTGTCGTTGTT
TCAGCGATGGGCATGTTGAATATGTCCTCCTCATCGACCGCTACGATATT
TGCCATGCGTTACTCTTACGTCGATCGTTTCGCCCGCTGCGTATCCTCTC
GCACGATAGAACCAAGAGGAGGAGCTCATCTAGAGTCAGTGGCGGCGGTG
ACGGGGACGCGAGAATTGCGAGTGCCGGAAGCAACCCCTACACCAGCAGT
TCGTTTTCGTCCCTGGCATCCACAGTCTCTACGACAACTGATCCCGGCGA
TCCGGAGAGCCAAACACGAACCTTGAGTCCCACCAACTCCGTCGATAGCG
GCCACACGAACCCTCTGGAGAGTCGTGTCCCTCGTGATGAGAATATTGAA
CGAAACACCGGTAGCAGTAACGGCATCAAGGGCAGCAGCATCAGAAATAG
TAGCAACAACAACGACAACAACAACGATGCAGGTCAGAGTGGTATCTATC
CGTCCACCGCCCACGCTTGGGGTGGTGACGACCCAAGAGCAGACACCAAT
GCCCAACAATTAGCTACAATCAAACAGCACCAGCAGCGACTTCAACAACA
ACAACAACAAGCTTCATCGAGAATTGACAAGTCCTCTATTACGGCTGTTA
CTGGCGCGGCCGACGCTACACGTGACGGCGTACCGGTGGCGGGATCCGGA
CTGGTGCCGTTTGAAGAAGGCAGGTCCGCGGTCGCCGGCAATGGCGGGTC
AACGAACCGACGTCGGTCGGTCTCGCGTTCCTCCGACACTGCGCTTCAGC
CCCCGAAAGACTGCACGTTAGGGTCGGGAGAAGGACGGAAAGTTGGCGGC
GGCGGAGACGGGGGAAGCCGAGGCGGGAACAAAGAGCAACGTAGTGATGT
TCCGGTAGATGTCAAGGATGGTGGCGACCATAAGTCCCATGCGGATTTGA
AGGGCATTGGCTCCGGCGTGTCCTCGGCGTCGGGGTCATCGTTTTGTTCT
TCCCGGACGGACGGTTACTCGGATGAAGAATCTGATATGTCTAGGTTATC
GTCATCTTATTCTGGTGGCGGGGAGGATTCCGGGTCTGTGGGCGACTCGA
GCTTCAGCGACGACTACGGTAAGCGCGGGGTATATATATGGACACAGACA
TGAACATATGAACGCATATTTCTGTTGAAAAAAGACACTCTTGACAGATT
GTTCTATTGGCGTGAGGAACAATCGTTTGCGGTATGAAATAAATGACTGT
GAAGGTAGCCTTTTGCAGTGCCGTCAATGGCGTCTTATCACCTCACGATA
ATAGCCGACTTCGATCAACAATTTTTTGCTTCACGCAATTACCTGGGCAA
AAGCTAAACCTCAGTGTTGGGATCGTTTTCCGTGTGTTGTCGCAATCGTT
TTTGCGACTGTTCCAAGTACCCGTAGTGTACATGCCTGAAAACTACGTGC
ACACCCCGTCAATGATTCGTCCTGACAGGGAGCTTTAGCGACAGCGTGAG
CAACGCGAGCGGCGAGACACCCGCCGACACGGACAGCTGCCGCTCGCGCT
CCCCTCGATATCATGGTGGCAGTGTGAGCTTAAATTCTGCTGGTGGTCTC
TCGGGTACGTGTCGGCCGCGTGGGCACCTGTATTGGTTACATGGCACGGC
GTACAGTACGGACCCGCGGGCAAGAACTGACTAATGAGATTTGGGCTACG
TTTCTTGTTTTGGCGAAGCAAGGACACATTGTTTTTTAAGTCTGCTCCCT
CCCAGGCTCAACCGTATCTTGAAGTATCCGACATTTCGGGCTTGCGTTGT
TGAAGTCATGTCTCGTGATGAGTGGGAGGTTGATGTACGACCTTCGGAAA
GGTACGCATGTTGGCCATACTGTAGCTGTAGTGATATATGGCCTTGGGGA
AGGCACGTCTAGGGCAGTGGACTCACACCTTTTGTCTAGAAATTGATCAC
GTGTAAATTCCCGAGCTTGAGATACCATTTGCTAACCAAGCATTCTGGAG
TACCCTTGTTAACCTACTGTACACAAAATGCTGTATTGTTCACATTTGTG
CATCATGCTGTTTGCCATGAGATCAGGTGTCTATTGAAATATAAATTGCC
TTTGCTTGTTTTTGACTCTGGCCGCGGTATGCTCTCGTATATCGAATCGG
TACGTCCGCTGACCGAACAAAAATCAGGCGGAACTGCTGGAGGGGACGGA
GGGGGTGGCGGTGGCAGTGGCAGCGGCAAACCGTCGTCGAGAACGAATTA
TTGGAGCGACGGAGTTTTTGAGAGCAGCGGGGCAAGCACGCCGCGCGGCG
AGCGCGTGTCCGCGCACCGCCGCCTCTCCCCAGAAGGGTTAGTCCACCCT
CCCCAAGCTGGCGACTCATGTATATCGCCCGCCCATCACGCAAATCACCG
CGCGCACAGCCTGAGGAAGATCAGGGAATCAGTCACCAGCACAAGCCGCG
GCAGCAACTTCAGAGGATCAGGCAAGAAAAAACTCGTCGACATCAATGGC
ACCGGCTTCAGCAGCAGTCACAAGCCTGTAGCGATCCGAGGAGACTACCT
ATCGACGGGAACGACTGTAACCATCGTAGGCCCCCCCGGCGACGGAGGTG
GCGGGAGAGGCACTGGTCCCGGCAGGTTCGCCGGTAAAAAAATCGAGGCC
AAAGGGTTGCGCCGACGCGCCCGAGCTATCCGGGGAGCGTTGCTTCGACG
TGGGGCCAGCGAGAAGAACAAGGCCTCGGAGGCATCGGCGGCATCGGCGG
CGATAGCGGGGGTCGGTGCGGTTGCAGTTCGCGAAAATGCCGTGACAGGG
AAGGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig7411:7819..11174- >mRNA_H-paniculata_contig7411.15394.1 ID=mRNA_H-paniculata_contig7411.15394.1|Name=mRNA_H-paniculata_contig7411.15394.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3108bp|location=Sequence derived from alignment at H-paniculata_contig7411:7819..11174- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCCAGTGCCCGCGACAGCGAGACGCGAGCCAACAATTTCCTCACCCC
CGGTGGAAGCCTAGCACCACTACCTGGCGTGGCTGTCAAGGAAAGTACAA
GCGCGAGCGAAAAGTGCGCCGTAGAAAATGACGGCGACAAAGATGGAATA
GCACCGCCAAAGCTGGCAGACGCTATCGCAGGAGTAGGCATATCCGTTTC
CGAGCGGCGAAGTAAAAAAGTGGGGAGCGACGGTGGGTGTGGGGATGGCG
GCATGACAAGAAGCGGGAGTCTGCTGAGCAGGAATAGCAGCCACTGTACA
TCTGGTTTTATAATCAAGGAGTGTGTCCACTCGAGCAGGGGGGAGAGCGG
CAGCAGGCAGCGCAGATGCCCAGTGCCCGCGACAGCGAGACGCGAGCCAA
CAATTTCCTCACCCCCGGTGGAAGCCTAGCACCACTACCTGGCGTGGCTG
TCAAGGAAAGTACAAGCGCGAGCGAAAAGTGCGCCGTAGAAAATGACGGC
GACAAAGATGGAATAGCACCGCCAAAGCTGGCAGACGCTATCGCAGGAGT
AGGCATATCCGTTTCCGAGCGGCGAAGTAAAAAAGTGGGGAGCGACGGTG
GGTGTGGGGATGGCGGCATGACAAGAAGCGGGAGTCTGCTGAGCAGGAAT
AGCAGCCACTGTACATCTGGTTTTATAATCAAGGAGTGTGTCCACTCGAG
CAGGGGGGAGAGCGGCAGCAGGCAGCGCAGAACCAAGAGGAGGAGCTCAT
CTAGAGTCAGTGGCGGCGGTGACGGGGACGCGAGAATTGCGAGTGCCGGA
AGCAACCCCTACACCAGCAGTTCGTTTTCGTCCCTGGCATCCACAGTCTC
TACGACAACTGATCCCGGCGATCCGGAGAGCCAAACACGAACCTTGAGTC
CCACCAACTCCGTCGATAGCGGCCACACGAACCCTCTGGAGAGTCGTGTC
CCTCGTGATGAGAATATTGAACGAAACACCGGTAGCAGTAACGGCATCAA
GGGCAGCAGCATCAGAAATAGTAGCAACAACAACGACAACAACAACGATG
CAGGTCAGAGTGGTATCTATCCGTCCACCGCCCACGCTTGGGGTGGTGAC
GACCCAAGAGCAGACACCAATGCCCAACAATTAGCTACAATCAAACAGCA
CCAGCAGCGACTTCAACAACAACAACAACAAGCTTCATCGAGAATTGACA
AGTCCTCTATTACGGCTGTTACTGGCGCGGCCGACGCTACACGTGACGGC
GTACCGGTGGCGGGATCCGGACTGGTGCCGTTTGAAGAAGGCAGGTCCGC
GGTCGCCGGCAATGGCGGGTCAACGAACCGACGTCGGTCGGTCTCGCGTT
CCTCCGACACTGCGCTTCAGCCCCCGAAAGACTGCACGTTAGGGTCGGGA
GAAGGACGGAAAGTTGGCGGCGGCGGAGACGGGGGAAGCCGAGGCGGGAA
CAAAGAGCAACGTAGTGATGTTCCGGTAGATGTCAAGGATGGTGGCGACC
ATAAGTCCCATGCGGATTTGAAGGGCATTGGCTCCGGCGTGTCCTCGGCG
TCGGGGTCATCGTTTTGTTCTTCCCGGACGGACGGTTACTCGGATGAAGA
ATCTGATATGTCTAGGTTATCGTCATCTTATTCTGGTGGCGGGGAGGATT
CCGGGTCTGTGGGCGACTCGAGCTTCAGCGACGACTACGAACCAAGAGGA
GGAGCTCATCTAGAGTCAGTGGCGGCGGTGACGGGGACGCGAGAATTGCG
AGTGCCGGAAGCAACCCCTACACCAGCAGTTCGTTTTCGTCCCTGGCATC
CACAGTCTCTACGACAACTGATCCCGGCGATCCGGAGAGCCAAACACGAA
CCTTGAGTCCCACCAACTCCGTCGATAGCGGCCACACGAACCCTCTGGAG
AGTCGTGTCCCTCGTGATGAGAATATTGAACGAAACACCGGTAGCAGTAA
CGGCATCAAGGGCAGCAGCATCAGAAATAGTAGCAACAACAACGACAACA
ACAACGATGCAGGTCAGAGTGGTATCTATCCGTCCACCGCCCACGCTTGG
GGTGGTGACGACCCAAGAGCAGACACCAATGCCCAACAATTAGCTACAAT
CAAACAGCACCAGCAGCGACTTCAACAACAACAACAACAAGCTTCATCGA
GAATTGACAAGTCCTCTATTACGGCTGTTACTGGCGCGGCCGACGCTACA
CGTGACGGCGTACCGGTGGCGGGATCCGGACTGGTGCCGTTTGAAGAAGG
CAGGTCCGCGGTCGCCGGCAATGGCGGGTCAACGAACCGACGTCGGTCGG
TCTCGCGTTCCTCCGACACTGCGCTTCAGCCCCCGAAAGACTGCACGTTA
GGGTCGGGAGAAGGACGGAAAGTTGGCGGCGGCGGAGACGGGGGAAGCCG
AGGCGGGAACAAAGAGCAACGTAGTGATGTTCCGGTAGATGTCAAGGATG
GTGGCGACCATAAGTCCCATGCGGATTTGAAGGGCATTGGCTCCGGCGTG
TCCTCGGCGTCGGGGTCATCGTTTTGTTCTTCCCGGACGGACGGTTACTC
GGATGAAGAATCTGATATGTCTAGGTTATCGTCATCTTATTCTGGTGGCG
GGGAGGATTCCGGGTCTGTGGGCGACTCGAGCTTCAGCGACGACTACGGG
AGCTTTAGCGACAGCGTGAGCAACGCGAGCGGCGAGACACCCGCCGACAC
GGACAGCTGCCGCTCGCGCTCCCCTCGATATCATGGTGGCAGTGTGAGCT
TAAATTCTGCTGGTGGTCTCTCGGGTACGTGTCGGGAGCTTTAGCGACAG
CGTGAGCAACGCGAGCGGCGAGACACCCGCCGACACGGACAGCTGCCGCT
CGCGCTCCCCTCGATATCATGGTGGCAGTGTGAGCTTAAATTCTGCTGGT
GGTCTCTCGGGTACGTGTCGGCGGAACTGCTGGAGGGGACGGAGGGGGTG
GCGGTGGCAGTGGCAGCGGCAAACCGTCGTCGAGAACGAATTATTGGAGC
GACGGAGTTTTTGAGCGGAACTGCTGGAGGGGACGGAGGGGGTGGCGGTG
GCAGTGGCAGCGGCAAACCGTCGTCGAGAACGAATTATTGGAGCGACGGA
GTTTTTGA back to top
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