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Homology
BLAST of mRNA_H-paniculata_contig7380.15353.1 vs. uniprot
Match: D7G7U6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7U6_ECTSI) HSP 1 Score: 169 bits (428), Expect = 1.000e-44 Identity = 124/306 (40.52%), Postives = 158/306 (51.63%), Query Frame = 1
Query: 1 LESALARTNADSDDELEAIRGSVRSLRAQRLAVEHLKDKAREDARMAESLKVRLREAESRIRELEAQGGKEVVRRLMDEVSELRARLKATSAALQTREKSVVELRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGARARLEEKASAAERXXXXXXXXXXXXXXXXXXXXXXAKTALGVSKGELETTVGNHIKTLDRARKDKEALLFERGQEQERLKELTVLCERQRSKLNEKGQDTKDLERALTSSKEATRLAEKQVSELHGSLSEVGERRKQEDLAAASKLRVISGRADELK 918
LE R + DSD ELEAIRGSVRSLRAQR AVE LK+KAR AQGG++VVRRLMDEV+ELRARLKATS A QTRE SV +LR +EKA A R A L SKG ++ TV + L+ ARK+KE+LLFE+GQ QER+KELT +CERQRSKL + G ++LER +++K+ TRLA++Q ++L LS +RR++ED A KLR + + +EL+
Sbjct: 66 LEQGFERESYDSDQELEAIRGSVRSLRAQRAAVEKLKEKARLXXXXXXXXXXXXXXXXXXXXXXRAQGGRDVVRRLMDEVTELRARLKATSTAFQTRENSVADLREAVQTLTLDLRAG-----------------------------------QEKARAQSRKLEQQCAASGRELASLSALLREANATLDASKGSMQATVAKQAEKLEAARKEKESLLFEKGQTQERVKELTSMCERQRSKLADAGHRARELERLASAAKKETRLAQEQAAKLKTELSAADKRRREEDAGATIKLRTAARQVEELR 336
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-06_000260.1 |
| Exons | 6 |
| Model size | 921 |
| Cds size | 921 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7380.15353.1 >prot_H-paniculata_contig7380.15353.1 ID=prot_H-paniculata_contig7380.15353.1|Name=mRNA_H-paniculata_contig7380.15353.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=307bp
LESALARTNADSDDELEAIRGSVRSLRAQRLAVEHLKDKAREDARMAESL
KVRLREAESRIRELEAQGGKEVVRRLMDEVSELRARLKATSAALQTREKS
VVELREAIRVLEQDRRSEQASFRTQSLKLEDQEKELLEQQASIRRLEGAR
ARLEEKASAAERRADEKCAKARRDVDSLSALLREAKTALGVSKGELETTV
GNHIKTLDRARKDKEALLFERGQEQERLKELTVLCERQRSKLNEKGQDTK
DLERALTSSKEATRLAEKQVSELHGSLSEVGERRKQEDLAAASKLRVISG
RADELKA back to topmRNA from alignment at H-paniculata_contig7380:236..7320- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig7380.15353.1 ID=mRNA_H-paniculata_contig7380.15353.1|Name=mRNA_H-paniculata_contig7380.15353.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7085bp|location=Sequence derived from alignment at H-paniculata_contig7380:236..7320- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTGGAATCAGCTCTCGCGCGGACCAACGCGGACTCGGACGACGAATTGGA
AGCAATCCGAGGCTCGGTGCGCAGCCTCCGCGCCCAGAGGCTGGCGGTAG
AGCACCTGAAAGATAAGGCCAGAGAAGACGCAAGAATGGCCGAGTCTCTC
AAGGTTCGCCTGCGAGAGGCGGAGAGCAGGATAAGGGAGCTAGAGGCTCA
GGGAGGGAAAGAGGTGGTGCGACGCCTCATGGACGAGGTGCGGTAGTAGG
CATGGCAAGTATTTCATGTTGAGTATTGCGCTAAGGTCATCGTCATTTCA
TTTCTTTTTTTTTTGCATGTCTGTACTCCAGTAGGCTATTAGAAATAGAT
CTTCACAACAACAGTGGATCTTTTCGGGTCCAGGGATCCGTTGTTGGCGT
GGGTTAACGACAAGACATAATAACACACGAAAACATAGCCACGTGACTCT
GCTAGTAGTTCAATCGAAATGCAAATGAACCACATTTCAATTTAACTTCT
AGTAAAAGGAGAATGCGAGTAAACCTTCCTGCAATACTTCCTGGTATAGC
TTCTAGTCTACCTAGTTTTATTTTGCAGGTTACTGTGTTATCATCCAATC
CCTTCGTGGCACAAGCAAGGGCCGGCCTTGGGGTGATACTGTTCCCCTAT
TGAATCTCTGTGCATCAGATATGTTCGAGATCAATCGCTGCTACCTGTAC
GGGTGATTTGATGTTTGGCTCGCCACGGCGATGCCCGCCTTCTTGCCTTC
CTTCCTTTCGTGAGTCGTTGGACGGCACCAAATCGGCACTAGACTAGCTA
TAGATAATGTGTCCCAAGTATGTGTTGACGCGTATCCAGTACGAGCCCAG
ACAGAAGTGCTGAGAACGAAAGACCGATATGTTCTACAGTACGTCTGGTG
GCGACCGTTTCGCGTTTGATCGTCTGCACAATTTTTTTAACCCAAACAGA
TTCGTGACAACGGCTAATTTTATCGTATCAATTTTGATTCTTATTTCACG
CGTTTTGCGGAGTAGAGCTGACGAAAAAACAATTCCCGTAATGTTTTTGA
TACTTTATTCAAGTGTTTTTTGTGGTGTAGCCGACCGCCTAGTTCCTACA
GCACAGTAGCATGTGATGCCGTTGCAAATCGCTGAATCGCTGGCAGCGTC
ACCGTTAATACGCAAAATTCCTCTTCTCAGCGGCGGCACCCTTGTTGGCC
CCTACACTATTAACCCACCCCAAAACGTGCCGTCACGTAATCTACAAATA
TTCATGAAGTGGAGAACATGTCGCTTGCCCCCAGAAAATGTAAGGCTTAT
CTCATGAGCGTGCATTATTCATGTAGTGTATGTATTTTTCTGTCTCATAT
ACTTATGTCGCGAACCCGTTCGCAGATGGTCATGAAATACCTTTTTTCCC
AGCTTACGGTCGGTCATGTGACATTTGCTGGTCTTGTCAAAGGTGTTGAA
AAGGTCAGATAGCAAATTCTTTGGGTTCGGGCCAAACCCACGCTGTAAGA
TGCAAACAAAAGATAACGCTGGTGTAGGACACACATAAATTCGGTATCTT
GATCGCACTCTAGTGTATCGAAATTGGATAATGACCGCGTAGGTAGCCTT
TCCAAAAAGCCCACTTCTACCTGTTCCTCCTTGAGTGGATCACAATTGGT
TGACGATGAAACTCCTTTCCATTAGTTTTATTCAATATGGTCATCAAAAT
ATTTGTATAGATTGTTCCATGTCTACCTCCGAGATACCAATTTCGAATAG
TATAATAGAATGTCTAGACACTTGTGTTAATTCAAAGCAACCGATTAGAC
GGTTACAGCATGCAATGGATGAGTGCAGTTCAGCGAGAGTACCTGTAAGT
ATGTAAAGTGGGTCCCACCTATTACCCTTTCACCGTTTGACCGCGGGTCT
CGACATCATCTCCACTTACTAATACTAGTAATAGTAAAACAGGGGGAAAC
AAGAGCGCCCATCCAATGAAATTACTACGGGGATAGAAAACCAACACTCA
GTCATCACAGAGACGGCATTAAAGACAGGCAGGGAGTTAGGTGGCATGGT
TCTGCGCACAACAACTGCAGTGCTCGATATTTTTTGTCTTGTTCCGTATT
TATGTTCCGAAATGGCCTTCAGCCCCTAAAGAATTGACGAGATAATTGTT
ATATACGTATGCGCTGTACCCGGATTAGCCTTAATTATGTGGTGTGTGAG
GTGCGCTCGTCCCTCGCGGCCTGTGATGTCCGGTCGTTCATGTGCAGGTG
TCGGAGCTACGTGCTCGCCTCAAAGCAACATCAGCAGCCTTGCAGACCCG
AGAAAAGAGCGTCGTCGAACTCCGCGAGGCAATACGAGTGCTTGAGCAGG
ATCGGCGGTCTGAGCAGGCCAGTTTTCGGACGCAATCGCTCAAGCTTGAG
GACCAGGTATGCTGGTCTTGGCAAGATTCTGTAGGCCTTCTATAAGCTTC
TGTAAGCCCCGAGAATGTGCGTGATGACACGTGAACGATGTTTGACACCT
GTAGTATTATTGGTATGTGAAGGTATTTTAGTTATCAAGCACCTCGTTCA
AGAGTACACAAGGTGAAGTTAGCTTCCACATAGGTAATTCGAACGATTGA
TTGCTTTTGCTGACGGTCTACTGCTTGCCGCTTGCTATTTGCTATTTATT
GTTTGCTCCTGGGCCGTGAAGGAAAAAGAACTGCTAGAGCAACAGGCGAG
CATCAGGCGTCTTGAAGGAGCCCGTGCGAGGCTCGAGGAGAAGGCTTCGG
CCGCGGAGAGACGAGCTGACGAGAAGGTGCCTGCTTCCCGTTGTTGTTTA
CTTGGGCCTTTACTGTCGACAAACAATTCAAACAGGAGTGCGCTGTTTTT
TTGGGGGTGGGTTAGGTAAGTTGTCATGAAGTCAGTACCCAGCTTGATCT
GTAGTTGAAGTGAGGTAAATCAATCCCTTTACATGAAATTTTCCTCAAGA
GAAATCAATCGTAACGTATTTTTTACGTATGACATGGTCCATCACGCAAG
GCAGCCCGCGTGGCTTGGGGTCAGCGGCCGCGGCGGTTACTGCGTATCTC
TCTGTGCAGCGCTGTCGTATCTTCGTTATGTTCGCGTGGTGTGCAAAGCA
GCTTGACAACCATCTTCTCTATCGGCATGGACTTTTTTGTAAGTGGACCT
GTGCTGGCCCGTACGTGCGCAGTTCGTGCGAAAGACGGCCGCGGTGATAC
TGCGCGCCGAGCAGTGAGGTCTATGCTGCCGTGTTAGCATCGCTTAAGGA
GACAGAAGCAGTAGCAGTAGCGGCGGCGGCAACAGCAGCAGTAGCAAGCG
ATAAAAACGAAGAGGGCCAAGTGCATAGGATCTCTTCTTACAGGAGCACC
CTCTCTTTTTGTACCATTTATGTCGCGCTTTGGTAAACGACTTCAGTAGC
TACTACTACATGTACAGCAGTAGCAGCGGCAACCTTTAGCCGAAGAGAAT
ATTGAATGCTGTCACCGCTACTAGTGAGTCAAGTTATCTGGACTCAGAAA
CACCACCGTCGAAGAGAATCAATATAATTGCTATGGGAAATTGTTGTCTA
CAAGTAAATAGCTTCCATTGAACCCAATTTCGGGGTGAAAATATTGATGG
TCGGAATGCTACGATTTTTTCATCATCAGTCGGCGGGCTGCCCCCGCCGA
CATTTGACAACGCCCACACTCCTTCGCACCAAGAATTGAACATTAGTAAT
AGTTGCTGAGCAGAACGTACTGCAACAGTCGAGAGCTTTCTAACGAATCC
GGCCTCGCGGTAAAACTCCAGGTAGCTGTCGAGAAATGCTATTTTGACCG
ACATCCTGCTTGCCGGTACTGAAAAACGAAATGGAACATGTGCTGCTCAC
GGAACCACAGCTCGCTTCGCTCGCGCAAATCATTGAAATCGTTAAAAAAA
TTCAAAAAATCCATGCATACGCATGAACTGACTTATTGGCGCCTGCGCAC
AGATGTGTGAGCCAGCGATCATAGCCATAATAGTCATGACAGAGTAACTT
TCATTTGCACTTACCTGTCCCCAAGGAATTTGGTTTTAAATGAGCAGAGA
AATGAGGAAATTTCATCAGCGGAAAAACACGAAATTTACTCCTAGCCGGG
TACCATGGTATGTACAGGTTATTTTCCACTTCGGTACTGTGTTTGAACCT
CTGTATACCGTTATACCGTTGTACCATAGTGAAAAGAAGCTTCGAGGGCG
AAAGAAAGGCATCTTGGGGTCTATCTGGATATAGCGGGGTGTTTACTCGT
TCATGACGGTAAAAATTCTGCTACTTATCGACGGTGCGTTTTGTGATGCG
TCATCGTTGCGGAGTGTTCGGTCTTCTTGAGGTATTGCAGTGAAGTGATT
ATTATCGAGATAGGGCATCGAAAAAGCTCCATGCATAGCATAGAGCTACC
CTCCCAGGCAATTATTTTCATCAGTGTGCTTCCATGTGCTGGCGTCTTGT
TGGAGCTCGTCGTGGTCGTTGCTTCCAAGTCTTCGTCGTTGACTGAGAAC
TGGTAGCTTGGTTGTAGGGGCCAAAGATGCCGCCGCTTCAAGAGGCACGT
TCGACGGCAAATAGGTACATGCTACGTTACTATGCACGCAATATACGATA
TTTGTGAGAGTGCTGTCTGCAGTCTATTTAATAGTCGTCAATGTTCCGCA
GGGTGCTGCTATGTACAGGCCATATAGATATTTGTTGAAGCATTTCCCCA
AATAATGTGGAACTCACGAGACTCGTCATCAGAGTAGGCCTGTCGATTTT
TCCGTTGCGATCGCCACAGTCACCCAGTGTCGGAAAATATCCACCGTGAA
TACAGCCTTAATTCCGGTCAATCTGACCCCTCTGCTCGATTTATTCCCAA
TAATTAGCATTTTTTTCCCATGTTTATCCATTTCTAGCTGTCGCTGTCGC
TGTTGTTGTTGTCGTTGCCGTTTATTTGACAATTTCATTTGCCATTTTCG
TAGCTCTTATTCCCACCATTGACCTCGTACCGTCACATTGCTTCTATTAC
TATTTGCCTTCTCTAGTGTGCCAAAGCTAGGCGCGACGTGGACTCATTGT
CTGCGCTACTTCGAGAGGCCAAGACAGCTCTGGGCGTTTCAAAGGGAGAA
CTGGAGACTACCGTGGGGAACCATATCAAGACTTTGGACAGAGCTCGAAA
GGTTTGTGTCGCACACGCGCTGAGGATAAACTACAGCTATTGCATTACAC
CCGTCCGTTCTGACCTTGCTCGCTTTGCTGTGGATATTTTGAGTATTTCG
ACCCGCTTCGGCAGCCTTGCAACACTTTCGTTCAGCGGCATGGATAAGTG
TGTATTTCGAAAAGAGGAACTGTTGAGCACATGCCATACGTGTATACTGG
AGAGGGATAGCTAGATGTACGATCGCGAAGAGGCAATGACCTAGAGTCTG
ACTGCGTTGATCCCACACGGTAGGGGTAGCAGACGGAAAACATTGATGGA
TTCAGCGCGGCATCGTCTTGGTGCATCACCCGATCGTTGTTGATGAAAGA
GCAGATGTAAAAATATCAATCGAGTTGGTCGTTATTGATTCTTCCCGTGT
CGGGATACCACGTGGAGCACACATGAACCGAGACACCCGCCAAGAACCAC
AACGTTCGACGAACAGATAGACAACCAATATTCTTCAAAATGACAAGGGG
TTTGTTGTAGCGGGAGTTCTCGCCATCCTTTGTGTGGCAGTTACAACACC
ATTGGCAGATTTGCCGTGCTGATACGCGCATGCCGTACACGAGAGGCTGC
GGCTCTAGTTGACGCCATTTTGAGAGAGTCCTCGTTGCGAGATGAACCTA
TGGGGTTGTCTGTTTTTTTCGTTGCTGCTCAGTTTCGCGGTCTAACGGTT
TCACCCAGGAGGAGGAGGAGGAGGAAGAGGGTTGCTGTGATTATCGATTT
TTGACGTTTTCACCGATTCCTTTTGATGGGGATTAAGACGGGCTGTGTTA
GTTTGTACTCAACGGTTTGGTGTTCGTTTTTCACGAATTCTACTCAGGAC
AAGGAGGCGTTGTTATTCGAGAGAGGACAGGAGCAAGAGAGGCTGAAGGA
GCTCACGGTGCTGTGCGAACGGCAGCGGTCCAAGCTGAACGAGAAGGGGC
AAGACACGAAGGACTTGGAACGTGCGCTGACGTCCTCCAAGGAGGCCACT
AGGTTGGCAGAAAAGCAGGTTCGAACTAAAGAACGGTGAACGCTGGATTT
TCGTATCGCAGGCACGTGAATTGTAGATGGGAATAAATCAGTCCACCCCA
CCCCGACGATCATGCAAACCACCCCTCTGACAAAAGAACAGGGTCGACAT
AAAAAGACAGTGTAGTATGTAAGATCCGGACTTGAAGGTTTTTTCGATCT
CTGCTTGTCGACAAGCAAGACCATAGCACTATTTGTCACGAGAGCACGGT
TGTCTGATGACCTAATGGCAGAGATAATCTCGGCACCCTTATGAGGAGTT
CGGCGGTCTAGTCCGCGCGTTGTTGTCTACTGCCGGTAGCCTCTGTCCGT
TCTTAATTTTGTTACGTGTCCGCTCCTATTCAGCTGTCATCCTAGTAGAC
TGCAGCATTAAAAAAAAAAAATTAGCCCCCGGAAAGCTGAGGCAAAAACC
TTTACCGATGCTTCCATACTTCCAAGTATTTTACCAGACTGCAGCAGGTA
CACACAAGTAACATGTAAGTTCTGGACGAGACAACTATGCCTGACATCAG
CATGACCTCAGCGTCCACCGCAATAGTGTTGGCAAAGTCAGCTATCATAG
TTCTTGTACAACAATTATTAAACCCGCTGGCACATTTTCGTTCTCTCTCC
TCAACTTGATAACCGCTCCAAGCTTGTTGCTTTATTATCAAATATATTTT
CATGACGTCTCAATAATGGCCTTTGCCTTTGTTCTGAGCTCCTCCCTTCG
CCCCCCCCCCCGTCCCCCGTCCCCTGTCGCCTCAACCGTGGTTATCACCT
GGGACTCTATCGCAACACAAGGTATCGGAATTGCATGGTAGCTTATCGGA
GGTGGGCGAGCGAAGGAAGCAGGAGGACCTCGCCGCGGCCAGCAAGCTAA
GAGTTATCTCTGGCCGCGCGGATGAGCTAAAGGCC back to topCoding sequence (CDS) from alignment at H-paniculata_contig7380:236..7320- >mRNA_H-paniculata_contig7380.15353.1 ID=mRNA_H-paniculata_contig7380.15353.1|Name=mRNA_H-paniculata_contig7380.15353.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1842bp|location=Sequence derived from alignment at H-paniculata_contig7380:236..7320- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTGGAATCAGCTCTCGCGCGGACCAACGCGGACTCGGACGACGAATTGGA
AGCAATCCGAGGCTCGGTGCGCAGCCTCCGCGCCCAGAGGCTGGCGGTAG
AGCACCTGAAAGATAAGGCCAGAGAAGACGCAAGAATGGCCGAGTCTCTC
AAGGTTCGCCTGCGAGAGGCGGAGAGCAGGATAAGGGAGCTAGAGGCTCA
GGGAGGGAAAGAGGTGGTGCGACGCCTCATGGACGAGTTGGAATCAGCTC
TCGCGCGGACCAACGCGGACTCGGACGACGAATTGGAAGCAATCCGAGGC
TCGGTGCGCAGCCTCCGCGCCCAGAGGCTGGCGGTAGAGCACCTGAAAGA
TAAGGCCAGAGAAGACGCAAGAATGGCCGAGTCTCTCAAGGTTCGCCTGC
GAGAGGCGGAGAGCAGGATAAGGGAGCTAGAGGCTCAGGGAGGGAAAGAG
GTGGTGCGACGCCTCATGGACGAGGTGTCGGAGCTACGTGCTCGCCTCAA
AGCAACATCAGCAGCCTTGCAGACCCGAGAAAAGAGCGTCGTCGAACTCC
GCGAGGCAATACGAGTGCTTGAGCAGGATCGGCGGTCTGAGCAGGCCAGT
TTTCGGACGCAATCGCTCAAGCTTGAGGACCAGGTGTCGGAGCTACGTGC
TCGCCTCAAAGCAACATCAGCAGCCTTGCAGACCCGAGAAAAGAGCGTCG
TCGAACTCCGCGAGGCAATACGAGTGCTTGAGCAGGATCGGCGGTCTGAG
CAGGCCAGTTTTCGGACGCAATCGCTCAAGCTTGAGGACCAGGAAAAAGA
ACTGCTAGAGCAACAGGCGAGCATCAGGCGTCTTGAAGGAGCCCGTGCGA
GGCTCGAGGAGAAGGCTTCGGCCGCGGAGAGACGAGCTGACGAGAAGGAA
AAAGAACTGCTAGAGCAACAGGCGAGCATCAGGCGTCTTGAAGGAGCCCG
TGCGAGGCTCGAGGAGAAGGCTTCGGCCGCGGAGAGACGAGCTGACGAGA
AGTGTGCCAAAGCTAGGCGCGACGTGGACTCATTGTCTGCGCTACTTCGA
GAGGCCAAGACAGCTCTGGGCGTTTCAAAGGGAGAACTGGAGACTACCGT
GGGGAACCATATCAAGACTTTGGACAGAGCTCGAAAGTGTGCCAAAGCTA
GGCGCGACGTGGACTCATTGTCTGCGCTACTTCGAGAGGCCAAGACAGCT
CTGGGCGTTTCAAAGGGAGAACTGGAGACTACCGTGGGGAACCATATCAA
GACTTTGGACAGAGCTCGAAAGGACAAGGAGGCGTTGTTATTCGAGAGAG
GACAGGAGCAAGAGAGGCTGAAGGAGCTCACGGTGCTGTGCGAACGGCAG
CGGTCCAAGCTGAACGAGAAGGGGCAAGACACGAAGGACTTGGAACGTGC
GCTGACGTCCTCCAAGGAGGCCACTAGGTTGGCAGAAAAGCAGGACAAGG
AGGCGTTGTTATTCGAGAGAGGACAGGAGCAAGAGAGGCTGAAGGAGCTC
ACGGTGCTGTGCGAACGGCAGCGGTCCAAGCTGAACGAGAAGGGGCAAGA
CACGAAGGACTTGGAACGTGCGCTGACGTCCTCCAAGGAGGCCACTAGGT
TGGCAGAAAAGCAGGTATCGGAATTGCATGGTAGCTTATCGGAGGTGGGC
GAGCGAAGGAAGCAGGAGGACCTCGCCGCGGCCAGCAAGCTAAGAGTTAT
CTCTGGCCGCGCGGATGAGCTAAAGGCCGTATCGGAATTGCATGGTAGCT
TATCGGAGGTGGGCGAGCGAAGGAAGCAGGAGGACCTCGCCGCGGCCAGC
AAGCTAAGAGTTATCTCTGGCCGCGCGGATGAGCTAAAGGCC back to top
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