mRNA_H-paniculata_contig7359.15329.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7359.15329.1 vs. uniprot
Match: A0A6H5KLB1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLB1_9PHAE) HSP 1 Score: 256 bits (654), Expect = 5.260e-74 Identity = 135/252 (53.57%), Postives = 176/252 (69.84%), Query Frame = 1
Query: 439 KRKAEMTAEERASYERERNRVHARNTRARKKQYMEELKERVENMHAQKAAVERQKEDAEKEEEAQIKRWESTVTTIMQLRCEGVTDEAKWMEVLAENFRFTLPLTPYRAYDPSEIVG-HRRVLLGIEGMISDVTSLTAMCVNMAKKCRAKAGDS-------FKPTTNPEEDAEPRVHLKCFLGTGDFLFSGPEGVMCMLSMRTTDARRYGSALEVEASGMLRACFAEDGKLEEMDVMFDGVAVHQQMQKAVG 1170
KRK EM +ERNR+HARNTRARKKQYMEELK++VE++HA++AA E KE +E+E +I RW +T+ ++ LRC+GV D A W EVL E+F +LPLTPYR +DP+++ G RRVL+G+EGMISD SLT MC N+A++CR K G S + PRVHLK + GD +FS G+MC+ SM T DA +GS LEVE +GMLRA F E GKL+E+++MFDG+AVHQQ+QKA+G
Sbjct: 51 KRKTEMA--------KERNRLHARNTRARKKQYMEELKDKVESLHAKRAAAEHNKEXXXREDEEKIARWAATLKNVLDLRCQGVVDPAVWNEVLTEDFELSLPLTPYRKFDPADVEGGRRRVLVGVEGMISDTASLTEMCENLAERCRQKGGLSPPXXXXXXXXXXXXXQPPRPRVHLKSCVSNGDMVFSSDRGIMCVFSMTTVDACDFGSPLEVEKNGMLRATFVEGGKLDELEIMFDGIAVHQQLQKAMG 294
BLAST of mRNA_H-paniculata_contig7359.15329.1 vs. uniprot
Match: A0A836C6X3_9STRA (BZIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6X3_9STRA) HSP 1 Score: 179 bits (454), Expect = 1.970e-45 Identity = 100/238 (42.02%), Postives = 147/238 (61.76%), Query Frame = 1
Query: 463 EERASYERERNRVHARNTRARKKQYMEELKERVENMHAQKAAVERQKEDAEKEEEAQIKRWESTVTTIMQLRCEGVTDEAKWMEVLAENFRFTLPLTPYRAYDPSEIVGHRRVLLGIEGMISDVTSLTAMCVNMAKKCRAKAGDSFKPTTNPEEDAEPRVHLKCFLGT--GDFLFSGPEGVMCMLSMRTTDARRYGSALEVEASGMLRACFAEDGKLEEMDVMFDGVAVHQQMQKAVG 1170
EER ERERNR+HARNTRARKK Y +EL ++ + +K E+ + +A K Q W +T+ M LR G DEA+W ++LAE+F+ T+P+TPYR++ PS++V +RRVLLG++GM++D SL M N+ K R G RV ++ LG+ + F G G+MC MRT DA+ +G+A E E SG+LRA F + G +EE+++ FDG+A++ Q+ +A G
Sbjct: 51 EERKKQERERNRMHARNTRARKKAYADELTAKLAALTKEKEEHEKAEAEASKARTVQQSAWAATLRQAMDLRAAGCLDEAQWSKILAEDFKMTMPVTPYRSFSPSDVVNNRRVLLGVDGMVADTASLQVMLDNIGTKTRKNEG---------------RVRVEYLLGSDAAENCFFGAAGLMCTFMMRTLDAKAHGAACECEKSGILRARFDDAGCIEELEMAFDGIAMYHQLMRAKG 273
BLAST of mRNA_H-paniculata_contig7359.15329.1 vs. uniprot
Match: A0A6H5K0R4_9PHAE (PAS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0R4_9PHAE) HSP 1 Score: 136 bits (343), Expect = 2.200e-30 Identity = 88/239 (36.82%), Postives = 146/239 (61.09%), Query Frame = 1
Query: 463 EERASYERERNRVHARNTRARKKQYMEELKERVENMHAQKA-AVERQKEDAEKEEEAQIKRWESTVTTIMQLRCEGVTDEAKWMEVLAENFRFTLPLTPYRAYDPSEIVGHRRVLLGIEGMISDVTSLTAMCVNMAKKCRA-KAGDSFKPTTNPEEDAEPRVHLKCFLGTGDFLFSGPEGVMCMLSMRTTDARRYGSALEVEASGMLRACFAED-GKLEEMDVMFDGVAVHQQMQKAVG 1170
+E+ +RERNR AR +R KKQ +++++++ + + A A R+KE A+K ++ + R ++ + + LR +G TDEA W+EVL+ + R T+P+TPYR+++P+++V +RRVLLG++GMISD SL+ + N+ K R ++ S K T + D G FS +G+MC +MRT DA ++ + E E +GM+R F D K+EE+D+ FD ++ +QQ+ A G
Sbjct: 88 DEKKLMDRERNRRQARKSRELKKQCADKMQQQLIQLEKESAEAAAREKEAAKKLKDCRTARCQA-LRKVFDLRADGCTDEASWLEVLSPDLRMTMPITPYRSFNPADVVNNRRVLLGVDGMISDTQSLSVLLDNIGVKTRLYESPVSIKFTLASDADE------------GGAFFSR-DGLMCSFTMRTLDAVKHAARREWEVNGMVRVRFNSDTNKIEELDMTFDAISCYQQLMLASG 312
BLAST of mRNA_H-paniculata_contig7359.15329.1 vs. uniprot
Match: A0A836CN81_9STRA (BZIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN81_9STRA) HSP 1 Score: 125 bits (313), Expect = 4.230e-26 Identity = 86/247 (34.82%), Postives = 138/247 (55.87%), Query Frame = 1
Query: 442 RKAEMTAEERASYERERNRVHARNTRARKKQYMEELKERVENMHAQKAAVERQKEDAEKEEEAQIKRWESTVTTIMQL----RCEGVTDEAKWMEVLAENFRFTLPLTPYRAYDPSEIVGHRRVLLGIEGMISDVTSLTAMCVNMAKKCRAKAGDSFKPTTNPEEDAEPRVHLKCFLGTGDFLFSGPEGVMCMLSMRTTDARRYGSALEVEASGMLRACFAEDGKLEEMDVMFDGVAVHQQMQKAVG 1170
R+ +M+ +E+A R+RNR HARNTR RKK Y+EEL+ V+ + A++ A A+ E A+ + +S +++Q+ R G T A W L E+F LP+TPYR++ +E+V +R+++GI+ MI+DV SL A+ V +CR +E RV ++ + G D + SG + + C +RT +A G+ E A GMLRA ++ KL +++ FD + QQ+Q+A G
Sbjct: 104 RRGQMSMDEKAEASRDRNRKHARNTRLRKKAYIEELERTVQQLTAERDAAAA----AKAAEGARAAQLQSVRFSVLQMALFYRAAGNTCRADWATALEESFTCVLPITPYRSFPSAEVVSGQRMIVGIDAMIADVASL-ALMVESVGRCRP---------------SERRVQVQYYAGPEDAITSG-DMLSCRWMLRTENAAACGALCECHAQGMLRARYSPSHKLAHLELAFDVMGFMQQLQRASG 329
BLAST of mRNA_H-paniculata_contig7359.15329.1 vs. uniprot
Match: A0A7S3YIB3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YIB3_HETAK) HSP 1 Score: 120 bits (302), Expect = 6.960e-26 Identity = 79/247 (31.98%), Postives = 133/247 (53.85%), Query Frame = 1
Query: 439 KRKAEMTAEERASYERERNRVHARNTRARKKQYMEELKERVENMHAQKAAVERQKEDAEKEEEAQIKRWESTVTTIMQLRCEGVTDEAKWMEVLAENFRFTLPLTPYRAYDPSEIVGHRRVLLGIEGMISDVTSLTAMCVNMAKKCRAKAGDSFKPTTNPEEDAEPRVHLKCFLGTGDFLFSGPEGVMCMLSMRTTDARRYGSALEVEASGMLRACFAEDGKLEEMDVMFDGVAVHQQMQKAVGCNP 1179
KR ++ EER R+RNR HARNTR RKK +++ELK++V+++ A + ER++ + A + + T + R GV D + W +L E F +PLTPYR++ S++ R + GIE +++DV SL M N+ K + P T PRV +K + + L G + +M +M+T++A G+ E++ GMLR F + K+ ++++FD ++ +Q++K G P
Sbjct: 106 KRNVPLSQEERMQQNRDRNREHARNTRLRKKAFVDELKKQVQDLAAAREREERERHLESQRSAAMNEIRFQVLATFLDYRGRGVKDLSLWSSILDEQFMMRMPLTPYRSFPQSQVQDGARKVKGIEDVLADVASLQVMLDNLGKNTEKWKQVTKSPNT-------PRVEMKYKINQKELLVQG-DMIMANWNMQTSNAMARGALAELKLYGMLRCAFTKFNKISYIELIFDVYSMLEQLKKCNGPEP 344
BLAST of mRNA_H-paniculata_contig7359.15329.1 vs. uniprot
Match: A0A7S2DLD9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DLD9_9STRA) HSP 1 Score: 118 bits (295), Expect = 3.700e-24 Identity = 75/229 (32.75%), Postives = 124/229 (54.15%), Query Frame = 1
Query: 484 RERNRVHARNTRARKKQYMEELKERVENMHAQKAAVERQKEDAEKEEEAQIKRWESTVTTIMQLRCEGVTDEAKWMEVLAENFRFTLPLTPYRAYDPSEIVGHRRVLLGIEGMISDVTSLTAMCVNMAKKCRAKAGDSFKPTTNPEEDAEPRVHLKCFLGTGDFLFSGPEGVMCMLSMRTTDARRYGSALEVEASGMLRACFAEDGKLEEMDVMFDGVAVHQQMQKAVG 1170
RERNR HAR TR RKK+YME LK ++E + AQ AA+E+Q +D ++A+ W + + + LR D+++W + + P+TPYR+Y ++++ +R VL+GI+ +I D SL + +A C D + +V L+ + + EG+MC MR+++ G EV G LRA F +GK++++++ FD +A +Q+Q A G
Sbjct: 127 RERNRRHARETRLRKKEYMETLKSQLEQLSAQNAALEKQIKDKRLGQDAKHDLWITKLQGALALRASAEPDQSRWRNFVDDEIVLVHPITPYRSYRSADVISNRCVLMGIQDIIDDAASLL---IALAGLCNEGIHDGTR---------NQKVQLRFNIDEQGMHYR-EEGIMCPFDMRSSNLTPLGLKSEVNKRGCLRAIFNSEGKVKQLELHFDPIAFWRQLQHASG 342
BLAST of mRNA_H-paniculata_contig7359.15329.1 vs. uniprot
Match: A0A7S2B104_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B104_9STRA) HSP 1 Score: 118 bits (296), Expect = 8.830e-24 Identity = 75/229 (32.75%), Postives = 121/229 (52.84%), Query Frame = 1
Query: 484 RERNRVHARNTRARKKQYMEELKERVENMHAQKAAVERQKEDAEKEEEAQIKRWESTVTTIMQLRCEGVTDEAKWMEVLAENFRFTLPLTPYRAYDPSEIVGHRRVLLGIEGMISDVTSLTAMCVNMAKKCRAKAGDSFKPTTNPEEDAEPRVHLKCFLGTGDFLFSGPEGVMCMLSMRTTDARRYGSALEVEASGMLRACFAEDGKLEEMDVMFDGVAVHQQMQKAVG 1170
R+RNR HARNTR RKK Y+E+LK+ V+ + + + R + E E +++ + +M R GV + KW VLA++F TLP+TP+R ++P+E+VG RRV+ G+ GMI D S + ++ ++ G+ P D E + F M +M TT+A G+ E GML+A FA++ + +D++FD ++ QQ+ +A G
Sbjct: 251 RDRNREHARNTRLRKKAYIEKLKQTVQVLSKECETITRDNQQDEVNETEILEQRHQVIQRMMNYRTSGVVNPEKWQAVLAQDFTMTLPITPHRFFNPNEVVGCRRVVRGVSGMIQDTASFKVLISSIGRRKYRGHGEVEVNFNMP--DGETVIKNDLF--------------MTRWTMSTTNAMSKGALAECSLEGMLKATFADENTISSVDLIFDVMSFMQQLPEACG 463
BLAST of mRNA_H-paniculata_contig7359.15329.1 vs. uniprot
Match: A0A7S2DGM6_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DGM6_9STRA) HSP 1 Score: 112 bits (280), Expect = 2.460e-22 Identity = 86/270 (31.85%), Postives = 135/270 (50.00%), Query Frame = 1
Query: 391 SSGAEDPYSSSSTFTGKRKAEMTAEERASYERERNRVHARNTRARKKQYMEELKERVENMHAQKAAVERQKEDAEKEEEAQIKRWEST----------VTTIMQLRCEGVTDEAKWMEVLAENFRFTLPLTPYRAYDPSEIVGHRRVLLGIEGMISDVTSLTAMCVNMAKKCRAKAGDSFKPTTNPEEDAEPRVHLKCFLGTGDFLFSGPEGVMCMLSMRTTDARRYGSALEVEASGMLRACFAEDGKLEEMDVMFDGVAVHQQMQKAVG 1170
S GA+D T GKRK + + +ERNR HARN+R RKK ++E+L+ + + +ERQ Q++R +T V ++ R +G W +LAE+F FTLP+TPYR ++P EI RVL G+EG+I D SL + +++ + SFKP + E D + + L C MR+TDA G+ E+E+ GML+ACF+ D K++ ++ +FD ++ + +A+G
Sbjct: 55 SDGAKDEDDEPQTSGGKRKPPPSKVD----VKERNRTHARNSRLRKKAHVEKLQRTALILSCKNEQMERQ----------QMERMAATLDIQATQRAMVQRLLYYRVQGCIVPGYWHRILAEDFTFTLPVTPYRYFNPGEISRSGRVLYGVEGIIRDTASLAQLFLSVGPRHHR---GSFKPAISMEIDLDSVAQERNIL-------------WCRWIMRSTDAVANGALAELESDGMLQACFSTDHKIQSVEFLFDVLSFTFSLSRALG 294
BLAST of mRNA_H-paniculata_contig7359.15329.1 vs. uniprot
Match: A0A6H5KUH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUH5_9PHAE) HSP 1 Score: 114 bits (284), Expect = 2.500e-22 Identity = 82/250 (32.80%), Postives = 122/250 (48.80%), Query Frame = 1
Query: 490 RNRVHARNTRARKKQYMEELKERVENMHAQKAAVERQKEDAEKEEEAQIKRWESTVTTIMQLRCEGVTDEAKWMEVLAENFRFTLPLTPYRAYDPSEIVGHRRVLLGIEGMISDVTSLTAMCVNMAKKCRAKAGDSFKPT--TNPEEDAEPRVHLKCFLGTGDFLFSGPEGVMCMLSMRTTDARRYGSALEVEASGMLRACFAEDGKLEEMDVMFDGVAVHQQMQKAVGCNPSKRATCVAATASAGSLQA 1233
RNR HARNTR RKKQY+E LK +V M KA ER + + A+ V I+ L+ W VL + F P+TP+R++ PSE R++ GIEGMI D SL ++ + R G K T+PE+ G +MC M+T +A G+ +V + GMLRA F+ D +++ ++++FD +++ QQ+Q+AVG + A A+ S QA
Sbjct: 238 RNREHARNTRMRKKQYVESLKLQVGEMLQAKAQEERDAQLETSKISAKRTAMRQMVLNILYLKATEELSPRSWACVLDDGFTCVCPITPFRSFPPSEAQEDHRLITGIEGMIQDTASLAVFIKSICPRSRNPTGRKLKYQFYTSPEDTVV-----------------GSNALMCQWLMKTDNATECGALCDVFSHGMLRAHFSPDNRIKRLEIVFDVMSLMQQLQRAVGQGELRMVPNTLALATQPSQQA 470
BLAST of mRNA_H-paniculata_contig7359.15329.1 vs. uniprot
Match: A0A7S2DGD5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DGD5_9STRA) HSP 1 Score: 112 bits (280), Expect = 1.320e-21 Identity = 86/270 (31.85%), Postives = 135/270 (50.00%), Query Frame = 1
Query: 391 SSGAEDPYSSSSTFTGKRKAEMTAEERASYERERNRVHARNTRARKKQYMEELKERVENMHAQKAAVERQKEDAEKEEEAQIKRWEST----------VTTIMQLRCEGVTDEAKWMEVLAENFRFTLPLTPYRAYDPSEIVGHRRVLLGIEGMISDVTSLTAMCVNMAKKCRAKAGDSFKPTTNPEEDAEPRVHLKCFLGTGDFLFSGPEGVMCMLSMRTTDARRYGSALEVEASGMLRACFAEDGKLEEMDVMFDGVAVHQQMQKAVG 1170
S GA+D T GKRK + + +ERNR HARN+R RKK ++E+L+ + + +ERQ Q++R +T V ++ R +G W +LAE+F FTLP+TPYR ++P EI RVL G+EG+I D SL + +++ + SFKP + E D + + L C MR+TDA G+ E+E+ GML+ACF+ D K++ ++ +FD ++ + +A+G
Sbjct: 55 SDGAKDEDDEPQTSGGKRKPPPSKVD----VKERNRTHARNSRLRKKAHVEKLQRTALILSCKNEQMERQ----------QMERMAATLDIQATQRAMVQRLLYYRVQGCIVPGYWHRILAEDFTFTLPVTPYRYFNPGEISRSGRVLYGVEGIIRDTASLAQLFLSVGPRHHR---GSFKPAISMEIDLDSVAQERNIL-------------WCRWIMRSTDAVANGALAELESDGMLQACFSTDHKIQSVEFLFDVLSFTFSLSRALG 294 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7359.15329.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7359.15329.1 >prot_H-paniculata_contig7359.15329.1 ID=prot_H-paniculata_contig7359.15329.1|Name=mRNA_H-paniculata_contig7359.15329.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=383bp MESDARSTRVLSGGGNASSGAEDPYSSSSTFTGKRKAEMTAEERASYEREback to top mRNA from alignment at H-paniculata_contig7359:1793..11337+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7359.15329.1 ID=mRNA_H-paniculata_contig7359.15329.1|Name=mRNA_H-paniculata_contig7359.15329.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9545bp|location=Sequence derived from alignment at H-paniculata_contig7359:1793..11337+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7359:1793..11337+ >mRNA_H-paniculata_contig7359.15329.1 ID=mRNA_H-paniculata_contig7359.15329.1|Name=mRNA_H-paniculata_contig7359.15329.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2298bp|location=Sequence derived from alignment at H-paniculata_contig7359:1793..11337+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |