mRNA_H-paniculata_contig73544.15326.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig73544.15326.1 vs. uniprot
Match: UPI0010172210 (uncharacterized protein LOC114170345 n=1 Tax=Vigna unguiculata TaxID=3917 RepID=UPI0010172210) HSP 1 Score: 61.6 bits (148), Expect = 1.970e-10 Identity = 32/77 (41.56%), Postives = 50/77 (64.94%), Query Frame = 1
Query: 1 ETWRSDSAATFHMTGSKEYMRDIRQS-NDQVRMGDYQLIDVEGVGTLTIVFPSVNGEVTLRLEDVAYVPRLKYNLLS 228
E W D+ + HMTG KE++ +I S ++++++ D +I EGVG + I +G+ T+ +EDV YVP +KYNLLS
Sbjct: 12 ENWFLDTRCSNHMTGHKEWLSNIDTSRSNKIKLADDNMIRAEGVGNVVI---KKDGKETMVIEDVLYVPGIKYNLLS 85
BLAST of mRNA_H-paniculata_contig73544.15326.1 vs. uniprot
Match: A0A6D2J390_9BRAS (CCHC-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2J390_9BRAS) HSP 1 Score: 57.0 bits (136), Expect = 1.370e-7 Identity = 32/76 (42.11%), Postives = 49/76 (64.47%), Query Frame = 1
Query: 7 WRSDSAATFHMTGSKEYMRDIRQS-NDQVRMGDYQLIDVEGVGTLTIVFPSVNGEVTLRLEDVAYVPRLKYNLLSL 231
W D+ A+ HMTG++ Y ++I +S +VR GD +D++G G+ I+F S NGE + L DV ++P LK N+ SL
Sbjct: 292 WYLDNGASNHMTGNRNYFKEIDESMTGKVRFGDDSRLDIKGKGS--ILFYSKNGEKKM-LADVYFIPELKSNITSL 364
BLAST of mRNA_H-paniculata_contig73544.15326.1 vs. uniprot
Match: UPI001CDB8C50 (uncharacterized protein LOC122853856 n=1 Tax=Aphidius gifuensis TaxID=684658 RepID=UPI001CDB8C50) HSP 1 Score: 55.1 bits (131), Expect = 6.540e-7 Identity = 30/81 (37.04%), Postives = 51/81 (62.96%), Query Frame = 1
Query: 1 ETWRSDSAATFHMTGSKEYMRD-IRQSNDQVRMGDYQLIDVEGVGTLTI-VFPSVNGE--VTLRLEDVAYVPRLKYNLLSL 231
+ W DS A++HM+G KE+ + +++ +R+GD ++++ GT+ I VF NGE V + L +V ++P LKYNL S+
Sbjct: 287 DKWLFDSGASYHMSGRKEWFTNMVKKEKSLIRVGDGKVLETNLYGTINISVF---NGESWVKMSLNNVLFIPELKYNLFSM 364
BLAST of mRNA_H-paniculata_contig73544.15326.1 vs. uniprot
Match: A0A8K0DN47_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0DN47_9COLE) HSP 1 Score: 52.0 bits (123), Expect = 8.280e-6 Identity = 24/79 (30.38%), Postives = 46/79 (58.23%), Query Frame = 1
Query: 1 ETWRSDSAATFHMTGSKEYMRDIRQSND--QVRMGDYQLIDVEGVGTLTIVFPSVNGEVTLRLEDVAYVPRLKYNLLSL 231
ETW +DS A+ HM+ KE+ + + + ++++G+ +I+ G G ++++ + L DV YVP +K+NL S+
Sbjct: 289 ETWIADSGASEHMSNQKEWFENYYEFDKPTEIKIGNGSVINAHGKGKISVIAFDGQDYIPTELNDVLYVPDIKFNLFSI 367
BLAST of mRNA_H-paniculata_contig73544.15326.1 vs. uniprot
Match: UPI00092E79E4 (uncharacterized protein LOC109352893 n=2 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092E79E4) HSP 1 Score: 51.6 bits (122), Expect = 1.090e-5 Identity = 28/78 (35.90%), Postives = 45/78 (57.69%), Query Frame = 1
Query: 1 ETWRSDSAATFHMTGSKEYMRDIRQSN-DQVRMGDYQLIDVEGVGTLTIVFPSVNGEVTLRLEDVAYVPRLKYNLLSL 231
E W DS + HMT KE+++D + +V+ D + EG G++ I+ NG + + +V YVP++KYNLLS+
Sbjct: 302 ELWYLDSGCSNHMTNHKEWLKDFDSTKKSRVKFADDSSLSAEGAGSVVIM--RKNGSKAI-VSNVLYVPKMKYNLLSI 376
BLAST of mRNA_H-paniculata_contig73544.15326.1 vs. uniprot
Match: A0A4D8Y0Y1_SALSN (Uncharacterized protein n=1 Tax=Salvia splendens TaxID=180675 RepID=A0A4D8Y0Y1_SALSN) HSP 1 Score: 50.4 bits (119), Expect = 2.810e-5 Identity = 29/71 (40.85%), Postives = 43/71 (60.56%), Query Frame = 1
Query: 19 SAATFHMTGSKEYMRDI-RQSNDQVRMGDYQLIDVEGVGTLTIVFPSVNGEVTLRLEDVAYVPRLKYNLLS 228
S + HMTG ++ RDI R QV++G+ +L+DVEG GT+ + + T ++DV VP+L NLLS
Sbjct: 78 SGCSNHMTGDEKQFRDIDRTIKSQVKLGNGELVDVEGKGTIAVN----TNKGTRLIKDVMLVPKLDANLLS 144
BLAST of mRNA_H-paniculata_contig73544.15326.1 vs. uniprot
Match: A0A8K0G8N2_9COLE (Uncharacterized protein n=2 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0G8N2_9COLE) HSP 1 Score: 49.7 bits (117), Expect = 5.320e-5 Identity = 23/79 (29.11%), Postives = 46/79 (58.23%), Query Frame = 1
Query: 1 ETWRSDSAATFHMTGSKEYMRDIRQSND--QVRMGDYQLIDVEGVGTLTIVFPSVNGEVTLRLEDVAYVPRLKYNLLSL 231
ETW +DS A+ H++ KE+ + + + ++++G+ +I+ G G ++++ + L DV YVP +K+NL S+
Sbjct: 298 ETWIADSGASEHLSHQKEWFENYYEFDKPTEIKIGNGSVINAHGKGKISLIAFDGQDYILTELNDVLYVPDIKFNLFSI 376
BLAST of mRNA_H-paniculata_contig73544.15326.1 vs. uniprot
Match: A0A438HJF5_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HJF5_VITVI) HSP 1 Score: 49.7 bits (117), Expect = 5.450e-5 Identity = 32/75 (42.67%), Postives = 44/75 (58.67%), Query Frame = 1
Query: 7 WRSDSAATFHMTGSKEYMRDIRQS-NDQVRMGDYQLIDVEGVGTLTIVFPSVNGEVTLRLEDVAYVPRLKYNLLS 228
W DS T HMTG+K D+ + N QV+MG+ L++V+G GT+ I + G T + DV VP L+ NLLS
Sbjct: 55 WFLDSGCTNHMTGNKNIFLDMDTTINSQVKMGNGDLVNVKGKGTVDI--QTKVG--TKYIRDVLLVPALEQNLLS 125
BLAST of mRNA_H-paniculata_contig73544.15326.1 vs. uniprot
Match: A0A438I7J1_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438I7J1_VITVI) HSP 1 Score: 49.7 bits (117), Expect = 5.480e-5 Identity = 32/75 (42.67%), Postives = 44/75 (58.67%), Query Frame = 1
Query: 7 WRSDSAATFHMTGSKEYMRDIRQS-NDQVRMGDYQLIDVEGVGTLTIVFPSVNGEVTLRLEDVAYVPRLKYNLLS 228
W DS T HMTG+K D+ + N QV+MG+ L++V+G GT+ I + G T + DV VP L+ NLLS
Sbjct: 168 WFLDSGCTNHMTGNKNIFLDMDTTINSQVKMGNGDLVNVKGKGTIGI--QTKVG--TKYIRDVLLVPALEQNLLS 238
BLAST of mRNA_H-paniculata_contig73544.15326.1 vs. uniprot
Match: A0A438CNJ5_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CNJ5_VITVI) HSP 1 Score: 49.7 bits (117), Expect = 5.530e-5 Identity = 31/75 (41.33%), Postives = 42/75 (56.00%), Query Frame = 1
Query: 7 WRSDSAATFHMTGSKEYMRDIRQS-NDQVRMGDYQLIDVEGVGTLTIVFPSVNGEVTLRLEDVAYVPRLKYNLLS 228
W DS T HMTG+K D+ + N QV+MG+ L++V+G GT+ I T + DV VP L+ NLLS
Sbjct: 260 WFLDSGCTNHMTGNKNIFLDMDTTINSQVKMGNGDLVNVKGKGTVGIQIKVG----TKYIRDVLLVPALEQNLLS 330 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig73544.15326.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig73544.15326.1 >prot_H-paniculata_contig73544.15326.1 ID=prot_H-paniculata_contig73544.15326.1|Name=mRNA_H-paniculata_contig73544.15326.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=83bp ETWRSDSAATFHMTGSKEYMRDIRQSNDQVRMGDYQLIDVEGVGTLTIVFback to top mRNA from alignment at H-paniculata_contig73544:388..636+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig73544.15326.1 ID=mRNA_H-paniculata_contig73544.15326.1|Name=mRNA_H-paniculata_contig73544.15326.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=249bp|location=Sequence derived from alignment at H-paniculata_contig73544:388..636+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig73544:388..636+ >mRNA_H-paniculata_contig73544.15326.1 ID=mRNA_H-paniculata_contig73544.15326.1|Name=mRNA_H-paniculata_contig73544.15326.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=498bp|location=Sequence derived from alignment at H-paniculata_contig73544:388..636+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |