mRNA_H-paniculata_contig7338.15306.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7338.15306.1 vs. uniprot
Match: D8LG92_ECTSI (F5/8 type C domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG92_ECTSI) HSP 1 Score: 397 bits (1021), Expect = 1.590e-114 Identity = 192/324 (59.26%), Postives = 236/324 (72.84%), Query Frame = 1
Query: 5200 GPSVSDEAVLASTPFETSLYNGMIAFNADHCVRMCCEQTECALVVFNEVEAICYMKSNEAKEWGENFKTHDA-AAGRDIYIIDSRLGEPEPLELEPTKCQNKRGLAYGFTDAKDLFTLRAGLSWWYNWSPGNLKEGLLEASLSQGSEYVPMIWSGEDLTQDRLEILDWVADSSHYLLGFNEPNYKYQSNLKADEAATLWPQLLILGTEHEMELVSPAVNYCSGNCVEEDPFKWLDDFFAECT-TLEDPK-CGMEYLAIHTYACEVKYINKHIHRYL-KYGLPIWLTEFACAFEAQEPNEAGQATLLSDATTYLEMHPDVFRYAW 6159
GP VS +V STPF T YN ++AF+A HCV+MCCEQ ECA VFNE E+ICY+K +EA HD A G Y ID+R G EP+EL PT+C +KRG+A+GF ++ DL+TL+ G+SWWY+WSPG+L +G+LEASL+QGS YVPMIW DLT++RL L WV D+S YLLGFNEPNY Q+NL EAA LWPQ+ + MELVSPAVN+C GNCVEEDP WLD+FF C +ED CG+ ++AIH+Y CEVKY+NKHIH Y+ +YGLPIWLTEFAC FEA E + GQA L A TYLE++P +FRYAW
Sbjct: 5 GPGVSLASVEVSTPFATGSYNAIVAFDATHCVQMCCEQEECARAVFNEGESICYLKGSEALA-----SYHDVPATGVSTYTIDTREGSSEPVELVPTQCSSKRGVAFGFKESGDLYTLKTGISWWYDWSPGSLADGILEASLTQGSLYVPMIWGEGDLTEERLRDLAWVGDTSPYLLGFNEPNYGEQANLTPQEAADLWPQVRQQADDLGMELVSPAVNFCYGNCVEEDPITWLDEFFEACGGDVEDRDFCGITHIAIHSYTCEVKYLNKHIHMYVQRYGLPIWLTEFACGFEATELDAYGQADFLESALTYLELNPHIFRYAW 323
BLAST of mRNA_H-paniculata_contig7338.15306.1 vs. uniprot
Match: A0A6H5KQ88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ88_9PHAE) HSP 1 Score: 338 bits (866), Expect = 1.090e-97 Identity = 164/278 (58.99%), Postives = 203/278 (73.02%), Query Frame = 1
Query: 5299 MCCEQTECALVVFNEVEAICYMKSNEAKEWGENFKTHDAAA-GRDIYIIDSRLGEPEPLELEPTKCQNKRGLAYGFTDAKDLFTLRAGLSWWYNWSPGNLKEGLLEASLSQGSEYVPMIWSGEDLTQDRLEILDWVADSSHYLLGFNEPNYKYQSNLKADEAATLWPQLLILGTEHEMELVSPAVNYCSGNCVEEDPFKWLDDFFAECTTLEDPK--CGMEYLAIHTYACEVKYINKHIHRYL-KYGLPIWLTEFACAFEAQEPNEAGQATLLSDATT 6120
MCCEQ ECA VFNE E+ICY+K +EA HD A G Y I++R G EP+EL PT+C +KRG+A+GF ++ DL+TL+ G+SWWY+WSPG+L +G+LEASL+QGS YVPMIW DLT++RL L WV D+S YLLGFNEPNY Q+NL EAA LWPQ+ + MELVSPAVN+C GNCVEEDP KWLDDFF C + + CG+ Y+AIH+Y C+VKY+NKHIH Y+ +YGLPIWLTEFAC FEA E + GQA++L A T
Sbjct: 1 MCCEQEECARAVFNEGESICYLKGSEAVA-----SYHDVPAIGVSTYSINTREGHSEPVELVPTQCSSKRGVAFGFKESDDLYTLKKGISWWYDWSPGSLADGILEASLTQGSLYVPMIWGEGDLTEERLRDLAWVGDTSPYLLGFNEPNYGEQANLTPQEAADLWPQVRQQADDLGMELVSPAVNFCYGNCVEEDPIKWLDDFFEACGGDVEGRDFCGITYIAIHSYTCKVKYLNKHIHMYVQRYGLPIWLTEFACGFEATELDANGQASVLGAAPT 273
BLAST of mRNA_H-paniculata_contig7338.15306.1 vs. uniprot
Match: D7FKU0_ECTSI (Putative serine rich protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKU0_ECTSI) HSP 1 Score: 327 bits (838), Expect = 2.670e-92 Identity = 163/341 (47.80%), Postives = 213/341 (62.46%), Query Frame = 1
Query: 5149 LLRFFVPFFHPTVI----THTGPSVSDEAVLASTPFETSLYNGMIAFNADHCVRMCCEQTECALVVFNEVEAICYMKSNEAKEWGENFKTHDAAAGRDIYIIDSRLGEPEPLELEPTKCQNKRGLAYGFTDAKDLFTLRAGLSWWYNWSPGNLKEGLLEASLSQGSEYVPMIWSGEDLTQDRLEILDWVADSSHYLLGFNEPNYKYQSNLKADEAATLWPQLLILGTEHEMELVSPAVNYCSGNCVEEDPFKWLDDFFAECTTLEDPKCGMEYLAIHTYACEVKYINKHIHRYLKYGLPIWLTEFACAFEAQEPNEAGQATLLSDATTYLEMHPDVFRYAW 6159
LLR + P V T+ G +SDEA TPFE + G++AFN DHCV+MCCE+ EC + VF+ EA+CY+K+ A E F + + G + + R G+P P+ EPT+C KRG+++ F DA DL L G+SWWYNWSP + + A S G EY+PMIW +DL RL L + SSH +LGFNEPN+ Q+NL EAA LW + E+VSPAVN+C G+C +EDP++WLDDFF+ C C + +A+H Y CEV+Y+NK +H YLKYGLPIW+TEFACA +A NEA QA L+DA T LE+HP V RYAW
Sbjct: 15 LLRLASAYDCPVVTREATTNYGAGISDEAHEGLTPFELGTWKGVVAFNEDHCVQMCCERLECFVAVFDHAEALCYLKAAAALE-STAFVSEE---GFTTFELSVREGDPSPVATEPTECHGKRGVSFDFKDADDLDALAPGMSWWYNWSPAIIASEVKIAQSSSGCEYIPMIWGEKDLDSTRLANLASLGQSSH-MLGFNEPNFGSQANLTPQEAAALWSTVKSEAATLGAEIVSPAVNFCGGDCTKEDPYEWLDDFFSACEG-----CDVTAIAVHIYTCEVRYLNKILHGYLKYGLPIWITEFACADDAAYMNEASQAAYLADALTLLELHPSVARYAW 345
BLAST of mRNA_H-paniculata_contig7338.15306.1 vs. uniprot
Match: UPI001951F8FD (Discoidin domain-containing protein n=2 Tax=Archangium violaceum TaxID=83451 RepID=UPI001951F8FD) HSP 1 Score: 194 bits (493), Expect = 4.590e-50 Identity = 104/240 (43.33%), Postives = 139/240 (57.92%), Query Frame = 1
Query: 5470 LELEPTKCQN---KRGLAYGFTDAKDLFTLRAGLSWWYNWSPGNLKEGLLEASLSQGSEYVPMIWSGEDLTQDRLEILDWVADSSHYLLGFNEPNYKYQSNLKADEAATLWPQLLILGTEHEMELVSPAVNYCSGNCVEE------DPFKWLDDFFAECTTLEDPKCGMEYLAIHTYACEVKYINKHIHRYLKYGLPIWLTEFACA-FEAQEPNEAGQATLLSDATTYLEMHPDVFRYAW 6159
L +P + Q KRGL YG+ A+D+ L G+SWWYNWSP + G S G +VPM+W G T + ++ + + YLLGFNEPN+ YQSN+ +AA WP L + ++LV+PAVNYC G+CV E DP +LD FFA CT C ++Y+A+H YAC++ + +I R+ KY PIWLTEFAC + A Q ++DA TYLE P VFRYAW
Sbjct: 17 LAWQPAEAQTRSTKRGLGYGYHSAEDMKALSKGMSWWYNWSP-TPEAGAASVYTSVGVSFVPMVWGG---TPNADQLAAAIPAGAQYLLGFNEPNFIYQSNMTPSQAAARWPVLEEVARRRNLKLVAPAVNYC-GDCVSEGGVTYSDPVTYLDAFFAACTN-----CKVDYIAVHWYACDLSALQWYIGRFKKYNKPIWLTEFACGDMPHDQITLAVQKKYMTDAVTYLENEPAVFRYAW 246
BLAST of mRNA_H-paniculata_contig7338.15306.1 vs. uniprot
Match: A0A1I2ARD7_9DELT (Glycosyl hydrolase catalytic core n=1 Tax=Nannocystis exedens TaxID=54 RepID=A0A1I2ARD7_9DELT) HSP 1 Score: 191 bits (484), Expect = 6.820e-50 Identity = 97/221 (43.89%), Postives = 133/221 (60.18%), Query Frame = 1
Query: 5500 KRGLAYGFTDAKDLFTLRAGLSWWYNWS-PGNLKEGLLEASLSQGSEYVPMIWSGEDLTQDRLEILDWVADSSHYLLGFNEPNYKYQSNLKADEAATLWPQLLILGTEHEMELVSPAVNYCSGNCVEEDPFKWLDDFFAECTTLEDPKCGMEYLAIHTYACEVKYINKHIHRYLKYGLPIWLTEFACAFEAQEPNEAGQATLLSDATTYLEMHPDVFRYAW 6159
KRG+AYG+ DL L G+SWWYNW+ P + G +A E+VPM+W G L QD + + + YLL FNEPN+ Q++L EAA LWPQ+ + H +E+VSPA+NYC G+C + DPF+W D+FFA C P C +++LA+H YAC + +I KY PIWLTEF+C +A++ + A Q + +A YLE P V RYAW
Sbjct: 82 KRGIAYGYHSHADLAALAPGVSWWYNWAVPPDPDVGDYQAL---NVEFVPMLWGGGSLDQDPP-----IPEGARYLLAFNEPNFGAQADLTPQEAAALWPQVEAVADAHGLEIVSPALNYCGGDCNKTDPFEWFDEFFAAC-----PGCRVDHLAVHWYACTRDALTWYIGEMKKYERPIWLTEFSC-LDAEDKSVAVQKQYMQEALEYLEAEPSVARYAW 288
BLAST of mRNA_H-paniculata_contig7338.15306.1 vs. uniprot
Match: UPI00193C4176 (Discoidin domain-containing protein n=2 Tax=Archangium violaceum TaxID=83451 RepID=UPI00193C4176) HSP 1 Score: 186 bits (472), Expect = 2.810e-47 Identity = 100/240 (41.67%), Postives = 136/240 (56.67%), Query Frame = 1
Query: 5470 LELEPTKCQN---KRGLAYGFTDAKDLFTLRAGLSWWYNWSPGNLKEGLLEASLSQGSEYVPMIWSGEDLTQDRLEILDWVADSSHYLLGFNEPNYKYQSNLKADEAATLWPQLLILGTEHEMELVSPAVNYCSGNCVEE------DPFKWLDDFFAECTTLEDPKCGMEYLAIHTYACEVKYINKHIHRYLKYGLPIWLTEFACA-FEAQEPNEAGQATLLSDATTYLEMHPDVFRYAW 6159
L +P + Q KRG+AYG+ A+D+ L G+SWWYNW+ G S G + PM+W G T + ++ + + YLLGFNEPN+++Q+N +AA LWP L + ++LVSPAVNYC G CV E DP +LD FFA CT C ++Y+A+H YAC++ + +I R+ KY PIWLTEFAC + A Q ++DA YLE P VFRYAW
Sbjct: 18 LASQPAQAQTRSVKRGVAYGYHSAEDMKALSVGMSWWYNWA-STPDAGAAGVYASLGVSFAPMVWGG---TPNADQLAAAIPAGAEYLLGFNEPNFRWQANKTPSQAAALWPILEEVARRRNLKLVSPAVNYC-GECVSEGGVTYSDPVAYLDAFFAACTN-----CKVDYIAVHWYACDLSALQWYIGRFKKYNKPIWLTEFACGDMPHDQITLAVQKKYMTDAVNYLENEPAVFRYAW 247
BLAST of mRNA_H-paniculata_contig7338.15306.1 vs. uniprot
Match: UPI001B30B840 (glycosyl hydrolase n=1 Tax=Hymenobacter terricola TaxID=2819236 RepID=UPI001B30B840) HSP 1 Score: 187 bits (474), Expect = 1.420e-46 Identity = 103/230 (44.78%), Postives = 135/230 (58.70%), Query Frame = 1
Query: 5500 KRGLAYGFTDAKDLFTLRAGLSWWYNWSPGNLKEGLLEASLSQGSEYVPMIWSGEDL---TQDRLEILDWVADSSHYLLGFNEPNYKYQSNLKADEAATLWPQLLILGTEHEMELVSPAVNYCSGNCVEED------PFKWLDDFFAECTTLEDPKCGMEYLAIHTYACEVKYINKHIHRYLKYGLPIWLTEFACA-FEAQEPNEAGQATLLSDATTYLEMHPDVFRYAW 6159
KRGLAYG+ A DL L GLSWWYNW+ + G G +YVPM W G L T ++ + + + YLLGFNEPN+ Q+NL ++AA LWP L + + ++LV+PAVNYC GNCV ++ P ++LD FFA C P C ++Y+A+HTY CE +Y+ + I KY PIWLTEFAC A + + A Q + DA YLE P VFRYAW
Sbjct: 37 KRGLAYGYHSAADLQALAPGLSWWYNWASVP-EAGAAGVYAGLGFDYVPMQW-GATLGSGTVTASQLAANIPNGARYLLGFNEPNFLDQANLTPNQAAALWPVLETVARQRNLQLVAPAVNYC-GNCVVQNGVTYYSPVQYLDAFFAAC-----PSCQVDYIAVHTYVCEERYLREKIGELKKYNKPIWLTEFACGDMPAAQISPAVQQKYMLDAVNYLEKEPAVFRYAW 258
BLAST of mRNA_H-paniculata_contig7338.15306.1 vs. uniprot
Match: A0A850GHC7_9DELT (Glyco_hydro_cc domain-containing protein n=1 Tax=Pseudenhygromyxa sp. WMMC2535 TaxID=2712867 RepID=A0A850GHC7_9DELT) HSP 1 Score: 181 bits (460), Expect = 2.010e-46 Identity = 99/227 (43.61%), Postives = 134/227 (59.03%), Query Frame = 1
Query: 5479 EPTKCQNKRGLAYGFTDAKDLFTLRAGLSWWYNWSPGNLKEGLLEASLSQGSEYVPMIWSGEDLTQDRLEILDWVADSSHYLLGFNEPNYKYQSNLKADEAATLWPQLLILGTEHEMELVSPAVNYCSGNCVEEDPFKWLDDFFAECTTLEDPKCGMEYLAIHTYACEVKYINKHIHRYLKYGLPIWLTEFACAFEAQEPNEAGQATLLSDATTYLEMHPDVFRYAW 6159
E T C KRG+AYG+ DL L +SWWYNW+ EG + G E+VPM+W G D E+L + D + LLGFNEPN+ Q+N+ A+EAA LWP L + +++L+SPAVNYC G C EDPF +LD FFA C ED C ++ +A+H YAC+ + ++ +YG PIWLTEF+C + + + Q T ++DA LE P V RYAW
Sbjct: 95 EGTAC--KRGMAYGYHSLADLEVLSPSVSWWYNWAT-TPDEGTDPGYAALGFEFVPMVW-GSWFDVD--EVLAAIPDDAEALLGFNEPNFFSQANISAEEAAALWPSLETIADAGQLKLISPAVNYCGGGCWSEDPFVYLDAFFAAC---ED--CRIDAIAVHWYACDGPALEWYLGEMAQYGKPIWLTEFSCG-DGDDLSLETQLTYMADALAILEADPLVERYAW 309
BLAST of mRNA_H-paniculata_contig7338.15306.1 vs. uniprot
Match: A0A2M9BAE3_9BACT (Putative secreted protein (Por secretion system target) n=1 Tax=Hymenobacter chitinivorans DSM 11115 TaxID=1121954 RepID=A0A2M9BAE3_9BACT) HSP 1 Score: 186 bits (472), Expect = 2.710e-46 Identity = 105/232 (45.26%), Postives = 135/232 (58.19%), Query Frame = 1
Query: 5500 KRGLAYGFTDAKDLFTLRAGLSWWYNW-SPGNLKEGLLEASLSQGSEYVPMIWS----GEDLTQDRLEILDWVADSSHYLLGFNEPNYKYQSNLKADEAATLWPQLLILGTEHEMELVSPAVNYCSGNCVEED------PFKWLDDFFAECTTLEDPKCGMEYLAIHTYACEVKYINKHIHRYLKYGLPIWLTEFACA-FEAQEPNEAGQATLLSDATTYLEMHPDVFRYAW 6159
KRGLAYG+ A D+ L G+SWWYNW S + + L G +YVPM W G +T DRL + + YLLGFNEPN++YQ+NL +AA LWP L + ++LVSPAVNYC G+CV E+ P ++LD FFA C P C ++Y+A+HTY CE +++ I KY PIWLTEFAC A + + A Q L DA YLE P +FRYAW
Sbjct: 37 KRGLAYGYHSAADMQVLAPGVSWWYNWYSRPDADAAAVYPGL--GVDYVPMQWGRDLDGSPVTADRLAAN--IPAGAKYLLGFNEPNFRYQANLTPTQAAALWPVLQEVARRKNLKLVSPAVNYC-GDCVAENGTTYYSPTQYLDAFFAAC-----PTCQVDYIAVHTYVCEERWLRDKIAELKKYNKPIWLTEFACGDMPATQISLAVQQKYLLDAVNYLEKEPAIFRYAW 258
BLAST of mRNA_H-paniculata_contig7338.15306.1 vs. uniprot
Match: W8F5D1_9BACT (F5/8 type C domain-containing protein n=2 Tax=Hymenobacter TaxID=89966 RepID=W8F5D1_9BACT) HSP 1 Score: 184 bits (468), Expect = 8.640e-46 Identity = 102/230 (44.35%), Postives = 132/230 (57.39%), Query Frame = 1
Query: 5500 KRGLAYGFTDAKDLFTLRAGLSWWYNWSPGNLKEGLLEASLSQGSEYVPMIWSGEDL---TQDRLEILDWVADSSHYLLGFNEPNYKYQSNLKADEAATLWPQLLILGTEHEMELVSPAVNYCSGNCVEED------PFKWLDDFFAECTTLEDPKCGMEYLAIHTYACEVKYINKHIHRYLKYGLPIWLTEFACA-FEAQEPNEAGQATLLSDATTYLEMHPDVFRYAW 6159
KRGLAYG+ A D+ L G+SWWYNW+ G+ G EYVPM W G +L T ++ + +SS YLLGFNEPN+ Q+NL +AA LWP L + + LVSPAVNYC G+CV E+ P ++LD FFA C P C ++Y+A+HTY CE +++ + I +Y PIWLTEFAC A + Q L DA YLE P +FRYAW
Sbjct: 37 KRGLAYGYHSAADMQVLAPGISWWYNWA-SQPDAGVAGVYPGLGVEYVPMQW-GRNLGSGTVTANQLAATIPNSSRYLLGFNEPNFLSQANLTPSQAAALWPVLEEVARRKNLALVSPAVNYC-GSCVSENGVTYYSPTQYLDAFFAAC-----PSCRVDYIAVHTYVCEERWLREKIAELKRYNKPIWLTEFACGDLPASQITLPAQQKYLLDAVNYLEKEPAIFRYAW 258 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7338.15306.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7338.15306.1 >prot_H-paniculata_contig7338.15306.1 ID=prot_H-paniculata_contig7338.15306.1|Name=mRNA_H-paniculata_contig7338.15306.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=298bp MIAFNADHCVRMCCEQTECALVVFNEVEAICYMKSNEAKEWGENFKTHDAback to top mRNA from alignment at H-paniculata_contig7338:1710..11097+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7338.15306.1 ID=mRNA_H-paniculata_contig7338.15306.1|Name=mRNA_H-paniculata_contig7338.15306.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9388bp|location=Sequence derived from alignment at H-paniculata_contig7338:1710..11097+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7338:1710..11097+ >mRNA_H-paniculata_contig7338.15306.1 ID=mRNA_H-paniculata_contig7338.15306.1|Name=mRNA_H-paniculata_contig7338.15306.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1788bp|location=Sequence derived from alignment at H-paniculata_contig7338:1710..11097+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |