mRNA_H-paniculata_contig7328.15297.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7328.15297.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 2.310e-19 Identity = 66/219 (30.14%), Postives = 102/219 (46.58%), Query Frame = 1
Query: 1 LFINLADPTSVPSVGGSLYAMVIVDDFL-WYKV----------------------------VGIVRTDNG-EGFQGEFGRVLNEQTINHEHTPPDTPQYNGVAERALGLLREKTIAQQ-------QGVAGSAKLWEEGMSYARDVSSMSVTTSIGGDMTPCKVWNGTAAPLGHLQPFRTVGYMCIPIREYKLASQRVKSIMLDVTHNLPSGTVRVPNDK 546
+F++L+ V S+GG Y +++ DD+ W +V V +VR+DNG E F+GEFGRV + I E TP +P+YNGVAERALGL+++ +A + G LW E ++++ + + + TTS +P ++W+G P G PF + R +K + K L N VR+ NDK
Sbjct: 727 VFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPSLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPPPPGATYPFLKPAVYKVK-RTHKSEPKAQKCFYLGPGINTNRDCVRILNDK 944
BLAST of mRNA_H-paniculata_contig7328.15297.1 vs. uniprot
Match: A0A6H5JTI6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI6_9PHAE) HSP 1 Score: 93.6 bits (231), Expect = 7.810e-19 Identity = 65/219 (29.68%), Postives = 102/219 (46.58%), Query Frame = 1
Query: 1 LFINLADPTSVPSVGGSLYAMVIVDDFL-WYKV----------------------------VGIVRTDNG-EGFQGEFGRVLNEQTINHEHTPPDTPQYNGVAERALGLLREKTIAQQ-------QGVAGSAKLWEEGMSYARDVSSMSVTTSIGGDMTPCKVWNGTAAPLGHLQPFRTVGYMCIPIREYKLASQRVKSIMLDVTHNLPSGTVRVPNDK 546
+F++L+ V S+GG Y +++ DD+ W +V V +VR+DNG E F+GEFGRV + I E TP +P+YNGVAERALGL+++ +A + G LW E ++++ + + + TTS +P ++W+G P G PF + R +K + K L N VR+ N+K
Sbjct: 736 VFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPSLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPPPPGATYPFLKPAVYKVK-RTHKSEPKAQKCFYLGPGINTNRDCVRILNEK 953
BLAST of mRNA_H-paniculata_contig7328.15297.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 93.6 bits (231), Expect = 7.850e-19 Identity = 65/219 (29.68%), Postives = 102/219 (46.58%), Query Frame = 1
Query: 1 LFINLADPTSVPSVGGSLYAMVIVDDFL-WYKV----------------------------VGIVRTDNG-EGFQGEFGRVLNEQTINHEHTPPDTPQYNGVAERALGLLREKTIAQQ-------QGVAGSAKLWEEGMSYARDVSSMSVTTSIGGDMTPCKVWNGTAAPLGHLQPFRTVGYMCIPIREYKLASQRVKSIMLDVTHNLPSGTVRVPNDK 546
+F++L+ V S+GG Y +++ DD+ W +V V +VR+DNG E F+GEFGRV + I E TP +P+YNGVAERALGL+++ +A + G LW E ++++ + + + TTS +P ++W+G P G PF + R +K + K L N VR+ N+K
Sbjct: 571 VFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPSLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPPPPGATYPFLKPAVYKVK-RTHKSEPKAQKCFYLGPGINTNRDCVRILNEK 788
BLAST of mRNA_H-paniculata_contig7328.15297.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 93.6 bits (231), Expect = 7.870e-19 Identity = 65/219 (29.68%), Postives = 102/219 (46.58%), Query Frame = 1
Query: 1 LFINLADPTSVPSVGGSLYAMVIVDDFL-WYKV----------------------------VGIVRTDNG-EGFQGEFGRVLNEQTINHEHTPPDTPQYNGVAERALGLLREKTIAQQ-------QGVAGSAKLWEEGMSYARDVSSMSVTTSIGGDMTPCKVWNGTAAPLGHLQPFRTVGYMCIPIREYKLASQRVKSIMLDVTHNLPSGTVRVPNDK 546
+F++L+ V S+GG Y +++ DD+ W +V V +VR+DNG E F+GEFGRV + I E TP +P+YNGVAERALGL+++ +A + G LW E ++++ + + + TTS +P ++W+G P G PF + R +K + K L N VR+ N+K
Sbjct: 584 VFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPSLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPPPPGATYPFLKPAVYKVK-RTHKSEPKAQKCFYLGPGINTNRDCVRILNEK 801
BLAST of mRNA_H-paniculata_contig7328.15297.1 vs. uniprot
Match: A0A6H5LL52_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL52_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 2.520e-18 Identity = 60/176 (34.09%), Postives = 82/176 (46.59%), Query Frame = 1
Query: 1 LFINLADPTSVPSVGGSLYAMVIVDD--------FLWYKV---------------------VGIVRTDNGEGFQGEFGRVLNEQTINHEHTPPDTPQYNGVAERALGLLREKTIAQQ-------QGVAGSAKLWEEGMSYARDVSSMSVTTSIGGDMTPCKVWNGTAAPLGHLQPF 420
LF+NL S+GG+ Y ++I DD FL +K V + RTD G FQG+F V I E TPP+TP+YNGVAERALGLL + +A + S LW E +S A + + TT G +P ++++GT P+G PF
Sbjct: 197 LFLNLGGRMQFKSIGGNWYTLIIRDDCTRWTRVFFLKHKSDAAAAFEQYLADYRAETVPCEVFVARTDGGGEFQGQFAEVCRRSGIKQEFTPPNTPKYNGVAERALGLLADSALASRIQAKEMFPDAPVSPGLWAEAISCACHQMNCTATTGNPGHKSPEELFHGTPPPVGSTHPF 372
BLAST of mRNA_H-paniculata_contig7328.15297.1 vs. uniprot
Match: A0A6H5J7U9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7U9_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 2.680e-18 Identity = 55/177 (31.07%), Postives = 87/177 (49.15%), Query Frame = 1
Query: 1 LFINLADPTSVPSVGGSLYAMVIVDDFL-WYKV----------------------------VGIVRTDNG-EGFQGEFGRVLNEQTINHEHTPPDTPQYNGVAERALGLLREKTIAQQ-------QGVAGSAKLWEEGMSYARDVSSMSVTTSIGGDMTPCKVWNGTAAPLGHLQPF 420
+F++L+ V S+GG Y +++ DD+ W +V V +VR+DNG E F+GEFGRV + I E TP +P+Y+GVAERALGL+ + +A + G LW E ++++ + + + TTS +P ++W+G P G PF
Sbjct: 37 VFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYDGVAERALGLIEDAALAARIQAPTLYPGAPNYPSLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPPPPGATYPF 213
BLAST of mRNA_H-paniculata_contig7328.15297.1 vs. uniprot
Match: A0A6H5K1N9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1N9_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 4.810e-18 Identity = 65/218 (29.82%), Postives = 98/218 (44.95%), Query Frame = 1
Query: 4 FINLADPTSVPSVGGSLYAMVIVDDFL-WYKV----------------------------VGIVRTDNG-EGFQGEFGRVLNEQTINHEHTPPDTPQYNGVAERALGLLREKTIAQQ-------QGVAGSAKLWEEGMSYARDVSSMSVTTSIGGDMTPCKVWNGTAAPLGHLQPFRTVGYMCIPIREYKLASQRVKSIMLDVTHNLPSGTVRVPNDK 546
F+ L+ S+GG Y +++ DD+ W +V V +VR+DNG E F+GEFGRV + I E TP +P+YNGVAERALGL+++ IA + G LW E ++++ + + + TTS +P ++W+G P G PF + R +K K L N VR+ N+K
Sbjct: 370 FVELSGKARAQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLKEKRADGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAAIAARIQAPTLYPGAPNYRSLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPPPPGATYPFLKPAVYKVK-RTHKSEPTAQKCFYLGPGINTNRDCVRILNEK 586
BLAST of mRNA_H-paniculata_contig7328.15297.1 vs. uniprot
Match: A0A6H5JMU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMU6_9PHAE) HSP 1 Score: 87.4 bits (215), Expect = 1.010e-16 Identity = 68/222 (30.63%), Postives = 101/222 (45.50%), Query Frame = 1
Query: 1 LFINLADPTSVPSVGGSLYAMVIVDD--------FLWYKV---------------------VGIVRTDNG-EGFQGEFGRVLNEQTINHEHTPPDTPQYNGVAERAL---GLLREKTIAQQ-------QGVAGSAKLWEEGMSYARDVSSMSVTTSIGGDMTPCKVWNGTAAPLGHLQPFRTVGYMCIPIREYKLASQRVKSIMLDVTHNLPSGTVRVPNDK 546
+F++L+ V S+GG Y +++ DD FL YK V +VR+DNG E F+GEFGRV + I E TP +P+YNGVAERAL GL+++ +A + G LW E ++ A + + + TTS +P ++W+G P G PF + R +K + K L N VR+ N+K
Sbjct: 397 VFVDLSGKARVQSLGGKWYTLIVKDDWNLXNRVYFLKYKPDAAEAFESCVAENRADGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALERMGLIKDAALAARIQAPTLYPGAPNYLSLWAEAIALACNALNCTSTTSNPEKKSPYEMWHGHPPPPGATYPFLKPAVYKVK-RTHKSEPKAQKCFYLGPGINNNRDCVRILNEK 617
BLAST of mRNA_H-paniculata_contig7328.15297.1 vs. uniprot
Match: A0A6H5L3E0_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3E0_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 1.880e-16 Identity = 62/219 (28.31%), Postives = 100/219 (45.66%), Query Frame = 1
Query: 1 LFINLADPTSVPSVGGSLYAMVIVDDFL-WYKV----------------------------VGIVRTDNG-EGFQGEFGRVLNEQTINHEHTPPDTPQYNGVAERALGLLREKTIAQQ-------QGVAGSAKLWEEGMSYARDVSSMSVTTSIGGDMTPCKVWNGTAAPLGHLQPFRTVGYMCIPIREYKLASQRVKSIMLDVTHNLPSGTVRVPNDK 546
+F++L+ V S+GG Y +++ DD+ W +V V +VR+DNG E F+GEFGRV + I E TP P++NGVAERALG +++ +A + G LW + ++++ + + + TTS +P ++W+G P G PF + R +K + K L N VR+ N+K
Sbjct: 572 VFVDLSGKVRVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHIPEHNGVAERALGPIKDAALAARIQAPTLYPGAPNYPSLWAKAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPPPPGATYPFLKPAVYKVK-RTHKSEPKAQKCFYLGPGINTNRDCVRILNEK 789
BLAST of mRNA_H-paniculata_contig7328.15297.1 vs. uniprot
Match: A0A6H5JXF7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF7_9PHAE) HSP 1 Score: 85.5 bits (210), Expect = 4.890e-16 Identity = 63/219 (28.77%), Postives = 99/219 (45.21%), Query Frame = 1
Query: 1 LFINLADPTSVPSVGGSLYAMVIVDDFL-WYKV----------------------------VGIVRTDNG-EGFQGEFGRVLNEQTINHEHTPPDTPQYNGVAERALGLLREKTIAQQ-------QGVAGSAKLWEEGMSYARDVSSMSVTTSIGGDMTPCKVWNGTAAPLGHLQPFRTVGYMCIPIREYKLASQRVKSIMLDVTHNLPSGTVRVPNDK 546
+F++L+ V S+ G Y +++ D + W +V V +VR+DNG E F+GEFGRV + I E TP +P+YNGVAERALGL+++ +A + G W E +++A + + + TTS +P ++W+G P G PF + R +K + K L N VR+ N+K
Sbjct: 597 VFMDLSGKARVQSLVGKWYTLIVKDVYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGTPNYPSFWAEAIAWACNALNCTSTTSNPEKKSPYEMWHGHPPPPGATYPFLKPAVYKVK-RTHKSEPKAQKCFYLGPGINTNRDCVRILNEK 814 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7328.15297.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7328.15297.1 >prot_H-paniculata_contig7328.15297.1 ID=prot_H-paniculata_contig7328.15297.1|Name=mRNA_H-paniculata_contig7328.15297.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=184bp LFINLADPTSVPSVGGSLYAMVIVDDFLWYKVVGIVRTDNGEGFQGEFGRback to top mRNA from alignment at H-paniculata_contig7328:566..1199+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7328.15297.1 ID=mRNA_H-paniculata_contig7328.15297.1|Name=mRNA_H-paniculata_contig7328.15297.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=634bp|location=Sequence derived from alignment at H-paniculata_contig7328:566..1199+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7328:566..1199+ >mRNA_H-paniculata_contig7328.15297.1 ID=mRNA_H-paniculata_contig7328.15297.1|Name=mRNA_H-paniculata_contig7328.15297.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1104bp|location=Sequence derived from alignment at H-paniculata_contig7328:566..1199+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |