mRNA_H-paniculata_contig7320.15291.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7320.15291.1 vs. uniprot
Match: D8LDY2_ECTSI (Protein CASP n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDY2_ECTSI) HSP 1 Score: 228 bits (580), Expect = 5.590e-68 Identity = 121/149 (81.21%), Postives = 133/149 (89.26%), Query Frame = 1
Query: 1 QVVLDFWKEFNLDGRRLQLDKQGLELQDAKDASLARRKHLAELTKEFRKKPDHDKVSGVQKLVKAYQEEIDALAKRCRAADSAFFSLYKSLYEAPDPAQVLERSVSERPRAAASELEVQKLQAELTEYEEEFSKLKNQVYIYQIRRKKE 447
+VVL FWKEFNLDGRRLQLDKQGLELQDAKDASL RRK+LAELTKEFRKK D +KV+GVQ+LVKAYQEEID LAKRCRA+DSAFFSLYK LYEAPDPA+ LERS SERPRAAASELEVQKL++EL EYEEEFSKLKNQ ++ +E
Sbjct: 28 KVVLTFWKEFNLDGRRLQLDKQGLELQDAKDASLVRRKNLAELTKEFRKKSDQEKVAGVQRLVKAYQEEIDTLAKRCRASDSAFFSLYKGLYEAPDPAKALERSASERPRAAASELEVQKLRSELAEYEEEFSKLKNQAADAKLEAARE 176
BLAST of mRNA_H-paniculata_contig7320.15291.1 vs. uniprot
Match: A0A6U0ZB21_9STRA (Protein CASP n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0ZB21_9STRA) HSP 1 Score: 159 bits (403), Expect = 1.670e-42 Identity = 83/138 (60.14%), Postives = 109/138 (78.99%), Query Frame = 1
Query: 1 QVVLDFWKEFNLDGRRLQLDKQGLELQDAKDASLARRKHLAELTKEFRKKPDHDKVSGVQKLVKAYQEEIDALAKRCRAADSAFFSLYKSLYEAPDPAQVLERSVSERPRAAASELEVQKLQAELTEYEEEFSKLKNQ 414
Q VL+FW F+LDGRR +LD + LE+++A++AS RK LAE TKEFR+ D +K++ + L+K+YQEEIDAL KR RA+DSAFF+LYK LYEAPDP + L ++ RPRAA SELEVQ+L+AE+ EYE+EF +LKNQ
Sbjct: 25 QAVLNFWSTFDLDGRRAKLDNKALEMKEAREASQRSRKGLAERTKEFRRMNDSEKLATTKDLLKSYQEEIDALTKRARASDSAFFTLYKDLYEAPDPGEALRAALVARPRAAQSELEVQRLRAEIEEYEKEFKELKNQ 162
BLAST of mRNA_H-paniculata_contig7320.15291.1 vs. uniprot
Match: A0A482S238_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S238_9ARCH) HSP 1 Score: 119 bits (297), Expect = 4.780e-31 Identity = 61/137 (44.53%), Postives = 94/137 (68.61%), Query Frame = 1
Query: 7 VLDFWKEFNLDGRRLQLDKQGLELQDAKDASLARRKHLAELTKEFRKKPDHDKVSGVQKLVKAYQEEIDALAKRCRAADSAFFSLYKSLYEAPDPAQVLERSVSERPRAAASELEVQKLQAELTEYEEEFSKLKNQV 417
V FWK F+ G+R+ DK E+++ K S+ RK L ELTK FR + ++V + +L+KAYQEEID L++RC+ +++A+F++YK LY+APDP VL+ ++ + LE+++L+AEL Y+EEF +LKNQV
Sbjct: 16 VSAFWKAFDFPGKRMAWDKTCTEMREHKTFSINGRKRLNELTKAFRARSKEEQVLSIAELLKAYQEEIDQLSRRCKLSETAYFAIYKVLYDAPDPHPVLDNFLNNAATGSTQALEIERLRAELAHYDEEFQQLKNQV 152
BLAST of mRNA_H-paniculata_contig7320.15291.1 vs. uniprot
Match: A0A8K1CI62_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CI62_PYTOL) HSP 1 Score: 127 bits (319), Expect = 5.100e-31 Identity = 74/137 (54.01%), Postives = 94/137 (68.61%), Query Frame = 1
Query: 4 VVLDFWKEFNLDGRRLQLDKQGLELQDAKDASLARRKHLAELTKEFRKKPDHDKVSGVQKLVKAYQEEIDALAKRCRAADSAFFSLYKSLYEAPDPAQVLERSVSERPRAAASELEVQKLQAELTEYEEEFSKLKNQ 414
VL +WK F+LD +R+ LD QG ++ KD SL RK LAE TK FRK PD DKV+ V L++AYQEEID L +R + A+++FF+LYK LY APDP LE S+++ + E E +KLQ EL EYE EFS LKNQ
Sbjct: 42 TVLQYWKAFDLDSKRVMLDTQGGTMKTEKDNSLRSRKKLAETTKNFRKLPDADKVASVGGLLRAYQEEIDNLTRRAKYAENSFFTLYKGLYAAPDPVPSLE-SLNDMNKLGELEEENKKLQNELREYEIEFSSLKNQ 177
BLAST of mRNA_H-paniculata_contig7320.15291.1 vs. uniprot
Match: A0A5D6XPF8_9STRA (Protein CASP n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPF8_9STRA) HSP 1 Score: 127 bits (318), Expect = 6.680e-31 Identity = 73/136 (53.68%), Postives = 94/136 (69.12%), Query Frame = 1
Query: 7 VLDFWKEFNLDGRRLQLDKQGLELQDAKDASLARRKHLAELTKEFRKKPDHDKVSGVQKLVKAYQEEIDALAKRCRAADSAFFSLYKSLYEAPDPAQVLERSVSERPRAAASELEVQKLQAELTEYEEEFSKLKNQ 414
VL FWK F+LD +RL LD QG ++ KD+SL RK LAE TK FRK PD +KV+ L++AYQEEID+L KR + A++AFF+LYK L+ APDP LE ++ R A E + +KL+ EL EYE EF+ LKNQ
Sbjct: 6 VLQFWKAFDLDSKRLVLDTQGSAMKSEKDSSLRSRKKLAETTKAFRKLPDSEKVAAAGGLLRAYQEEIDSLTKRAKFAENAFFTLYKGLFAAPDPVPSLEAALDAR--AGDVEEQNRKLRRELREYELEFASLKNQ 139
BLAST of mRNA_H-paniculata_contig7320.15291.1 vs. uniprot
Match: A0A1V9YM50_9STRA (Protein CASP n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YM50_9STRA) HSP 1 Score: 125 bits (314), Expect = 1.510e-30 Identity = 68/134 (50.75%), Postives = 93/134 (69.40%), Query Frame = 1
Query: 16 FWKEFNLDGRRLQLDKQGLELQDAKDASLARRKHLAELTKEFRKKPDHDKVSGVQKLVKAYQEEIDALAKRCRAADSAFFSLYKSLYEAPDPAQVLERSVSERPRAA-ASELEVQKLQAELTEYEEEFSKLKNQ 414
+WK F+LD +R QLD QG+ +Q+ K+ASL RK LA+LTK FRK D +K +G+ L+KAYQEEID L KR + +D+AFF+LYK+LYEAPDP L+ ++ A A ++ L+ E+ YE EF+ LKNQ
Sbjct: 15 YWKGFDLDSKRAQLDAQGVSMQEQKEASLKSRKALADLTKRFRKLNDSEKAAGLPPLLKAYQEEIDTLTKRAKFSDNAFFALYKALYEAPDPVPALDAALEASTTAVTAGNSDIDALRKEIQAYEVEFATLKNQ 148
BLAST of mRNA_H-paniculata_contig7320.15291.1 vs. uniprot
Match: G4Z145_PHYSP (Protein CASP n=9 Tax=Phytophthora TaxID=4783 RepID=G4Z145_PHYSP) HSP 1 Score: 120 bits (302), Expect = 1.050e-28 Identity = 74/139 (53.24%), Postives = 92/139 (66.19%), Query Frame = 1
Query: 7 VLDFWKEFNLDGRRLQLDKQGLELQDAKDASLARRKHLAELTKEFRK-KPDHDKVSGVQKLVKAYQEEIDALAKRCRAADSAFFSLYKSLYEAPDPAQVLERSVSERPRAAASEL--EVQKLQAELTEYEEEFSKLKNQ 414
VL FWK F+LD +R+QLD QG ++ KDAS+ RK LAE TK FR+ D DK +G L+KAYQEEID L +R + +++AFF LYK LY APDPA L S +A EL E +KL+ EL EYE EF+ LKNQ
Sbjct: 43 VLQFWKAFDLDSKRVQLDSQGSTMKSEKDASVRSRKKLAETTKHFRRLATDADKAAGAGPLLKAYQEEIDHLTRRAKFSENAFFQLYKGLYAAPDPAPALALVASS---SATDELTEENRKLKRELKEYEAEFATLKNQ 178
BLAST of mRNA_H-paniculata_contig7320.15291.1 vs. uniprot
Match: K3WEU8_GLOUD (Protein CASP n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WEU8_GLOUD) HSP 1 Score: 120 bits (302), Expect = 1.060e-28 Identity = 71/136 (52.21%), Postives = 90/136 (66.18%), Query Frame = 1
Query: 7 VLDFWKEFNLDGRRLQLDKQGLELQDAKDASLARRKHLAELTKEFRKKPDHDKVSGVQKLVKAYQEEIDALAKRCRAADSAFFSLYKSLYEAPDPAQVLERSVSERPRAAASELEVQKLQAELTEYEEEFSKLKNQ 414
VL FWK F+LD +RL LD QG ++ KD S+ RK LAE TK FRK PD DKV G+ L++AYQEEID L KR + +++AFF LYK L+ APDP LE + +E E ++L+ EL EYE EF+ LKNQ
Sbjct: 39 VLQFWKAFDLDSKRLVLDTQGNTMKTEKDNSVRSRKKLAETTKTFRKLPDSDKVHGIGGLLRAYQEEIDNLTKRAKYSENAFFMLYKGLFAAPDPVPSLEAIADMK--IQETEDENRRLKRELKEYELEFASLKNQ 172
BLAST of mRNA_H-paniculata_contig7320.15291.1 vs. uniprot
Match: A0A7S3GZW7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GZW7_9STRA) HSP 1 Score: 115 bits (289), Expect = 1.350e-28 Identity = 53/135 (39.26%), Postives = 100/135 (74.07%), Query Frame = 1
Query: 10 LDFWKEFNLDGRRLQLDKQGLELQDAKDASLARRKHLAELTKEFRKKPDHDKVSGVQKLVKAYQEEIDALAKRCRAADSAFFSLYKSLYEAPDPAQVLERSVSERPRAAASELEVQKLQAELTEYEEEFSKLKNQ 414
L+ W+ FNL+ R++ LD+ +E+++AK AS+ R+ L ++TK FR KP ++++ + +++K YQEEID L++R + ++ FF+L+K+LYE PDP++ +E ++ + ++LE+++L++EL++Y+ EF +LKNQ
Sbjct: 17 LELWRNFNLEQRKVSLDQSCVEMREAKTASITGRRRLNDITKAFRSKPKEEQINMMTEILKCYQEEIDQLSRRSKNCETTFFTLFKALYELPDPSECIEGLINTVMTGSTNQLEIERLRSELSQYDVEFQQLKNQ 151
BLAST of mRNA_H-paniculata_contig7320.15291.1 vs. uniprot
Match: H3GFJ9_PHYRM (Protein CASP n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GFJ9_PHYRM) HSP 1 Score: 119 bits (299), Expect = 2.700e-28 Identity = 72/137 (52.55%), Postives = 88/137 (64.23%), Query Frame = 1
Query: 7 VLDFWKEFNLDGRRLQLDKQGLELQDAKDASLARRKHLAELTKEFRKK-PDHDKVSGVQKLVKAYQEEIDALAKRCRAADSAFFSLYKSLYEAPDPAQVLERSVSERPRAAASELEVQKLQAELTEYEEEFSKLKNQ 414
VL FWK F+LD +RLQLD QG ++ KDAS+ RK LAE TK FR+ D DK +G L+KAYQEEID L +R + +++AFF LYK LY APDPA L S E +KL+ EL EYE EF+ LKNQ
Sbjct: 42 VLQFWKAFDLDSKRLQLDAQGSTMKSEKDASVRSRKKLAETTKHFRRLGTDADKAAGAGPLLKAYQEEIDHLTRRAKFSENAFFQLYKGLYAAPDPAPALALVASSSFGTEDLTDENKKLKRELKEYEAEFASLKNQ 178 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7320.15291.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7320.15291.1 >prot_H-paniculata_contig7320.15291.1 ID=prot_H-paniculata_contig7320.15291.1|Name=mRNA_H-paniculata_contig7320.15291.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=164bp QVVLDFWKEFNLDGRRLQLDKQGLELQDAKDASLARRKHLAELTKEFRKKback to top mRNA from alignment at H-paniculata_contig7320:389..4221- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7320.15291.1 ID=mRNA_H-paniculata_contig7320.15291.1|Name=mRNA_H-paniculata_contig7320.15291.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3833bp|location=Sequence derived from alignment at H-paniculata_contig7320:389..4221- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7320:389..4221- >mRNA_H-paniculata_contig7320.15291.1 ID=mRNA_H-paniculata_contig7320.15291.1|Name=mRNA_H-paniculata_contig7320.15291.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=984bp|location=Sequence derived from alignment at H-paniculata_contig7320:389..4221- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |