mRNA_H-paniculata_contig7318.15288.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7318.15288.1 vs. uniprot
Match: D7FT52_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT52_ECTSI) HSP 1 Score: 216 bits (550), Expect = 1.170e-64 Identity = 101/135 (74.81%), Postives = 122/135 (90.37%), Query Frame = 1
Query: 1 QDMQYREQKKVLESGMPAFQIFVRTKLNNMWYPCGMMMGDDKAKATVDAMMGGLLAGVSKYSLEKGIASSVVQKKGDLIRQVSAAYPQLKGKDLTFGFKIVYQDLEEKLGKQAVTEITKDMTLGPLDSMKKKMGW 405
QDMQY+EQ+K ++SGMP+FQI+VRTK+NNMWYPCG+M GDDKAKATVDAM+ GLL VSKYSLEKG+ASSV+ + DL+RQVS+AYPQ+ GK+LTFGFK++Y DLE K+GKQ VTEITKDMTLGPLD+ KKKMG+
Sbjct: 82 QDMQYQEQRKAMQSGMPSFQIYVRTKVNNMWYPCGLMQGDDKAKATVDAMISGLLKDVSKYSLEKGVASSVLANRKDLVRQVSSAYPQIAGKELTFGFKVIYADLEAKMGKQEVTEITKDMTLGPLDAFKKKMGF 216
BLAST of mRNA_H-paniculata_contig7318.15288.1 vs. uniprot
Match: A0A836CMT2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMT2_9STRA) HSP 1 Score: 120 bits (301), Expect = 3.920e-28 Identity = 61/133 (45.86%), Postives = 88/133 (66.17%), Query Frame = 1
Query: 16 REQKKVLESGMPAFQIFVRTKLNNMWYPCGMMMGDDKAKATVDAMMGGLLAGVSKYSLEKGIASSVV-QKKGDLIRQVSAAYPQL--KGKDLTFGFKIVYQDLEEKLGKQAVTEITKDMTLGPLDSMKKKMGW 405
R Q+ + +P F+IF RTK NMWYPCG + GD+++KATVDA+ G L+ + + +LEKG+A SV+ +K L ++ YPQL + +L FGFK+ Y LEEKLG Q +T +T++M LG D +KK G+
Sbjct: 82 RAQRASTPANLPVFEIFCRTKRANMWYPCGALGGDERSKATVDALSNGFLSDLYRNALEKGVAESVLGPQKSQLKGSITRMYPQLAKEASNLEFGFKVKYAPLEEKLGPQKITLLTEEMKLGAFDKLKKNFGF 214
BLAST of mRNA_H-paniculata_contig7318.15288.1 vs. uniprot
Match: A0A7S2WK66_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WK66_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 5.190e-20 Identity = 52/126 (41.27%), Postives = 75/126 (59.52%), Query Frame = 1
Query: 43 GMPAFQIFVRTKLNNMWYPCGMMMGDDKAKATVDAMMGGLLA--GVSKYSLEKGIASSVVQKKGD--LIRQVSAAYPQLKG--KDLTFGFKIVYQDLEEKLGKQAVTEITKDMTLGPLDSMKKKMG 402
G P F ++V+T NMWYPCG M GD +AK V+ + L G+ K ++++ +ASS+ D L+ QV YP LK DL FG+K+V++ LE+ +GKQ + +T DM GPLD +K G
Sbjct: 133 GYPVFNLYVQTPRANMWYPCGSMKGDSRAKQLVEGWVANSLGMGGMVKGNIDRSVASSIFTGGNDKNLVDQVCQMYPALKPAKNDLQFGYKVVFEGLEDSVGKQEIQVLTPDMKEGPLDKLKSAFG 258
BLAST of mRNA_H-paniculata_contig7318.15288.1 vs. uniprot
Match: B7GCR7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GCR7_PHATC) HSP 1 Score: 94.0 bits (232), Expect = 1.360e-18 Identity = 55/143 (38.46%), Postives = 82/143 (57.34%), Query Frame = 1
Query: 10 QYREQKKVL-------------ESGMPAFQIFVRTKLNNMWYPCGMMMGDDKAKATVDAMM-GGLLAGVSKYSLEKGIASSVVQKKGDLIRQVSAAYPQLKG--KDLTFGFKIVYQDLEEKLGKQAVTEITKDMTLGPLDSMK 390
QY++QK+++ + G+P F +FVRTK NMWYPCG GD+++ A + GGLLAGVSK ++ GIA S+ + +G L V+ +YPQL+ +D FG+K+ Y L E+ + + I T G DS+K
Sbjct: 59 QYKKQKEMMAMREEMIAAQKPGQDGLPVFNLFVRTKKANMWYPCGSFKGDERSAALAKSYADGGLLAGVSKRQIDGGIAGSLYRDQGKLKESVARSYPQLRKSREDFEFGYKLSYDGLSEEQSSE-IKVIEPKETKGVFDSIK 200
BLAST of mRNA_H-paniculata_contig7318.15288.1 vs. uniprot
Match: A0A7S2L426_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L426_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 1.160e-17 Identity = 47/123 (38.21%), Postives = 72/123 (58.54%), Query Frame = 1
Query: 43 GMPAFQIFVRTKLNNMWYPCGMMMGDDKAKATVDAMMG-GLLAGVSKYSLEKGIASSVVQKKGDLIRQVSAAYPQLKGK--DLTFGFKIVYQDLEEKLGKQAVTEITKDMTLGPLDSMKKKMG 402
G+P F +F+RTK NMWYPCG GD+++ A + G+L+G+SK L+KG+A S+ + + L + AYPQL+ D +G+K+ Y+ L E+ GK + IT G +D +K G
Sbjct: 82 GLPVFNLFIRTKKGNMWYPCGSFKGDERSAALAKSYADDGMLSGISKNQLDKGVAGSIFRDQKKLEESLCRAYPQLRKSRGDFEYGYKLAYEGLSEEQGK--IGMITPQAQSGFMDGIKGMFG 202
BLAST of mRNA_H-paniculata_contig7318.15288.1 vs. uniprot
Match: A0A7S2EM79_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EM79_TRICV) HSP 1 Score: 88.2 bits (217), Expect = 2.190e-17 Identity = 48/125 (38.40%), Postives = 71/125 (56.80%), Query Frame = 1
Query: 37 ESGMPAFQIFVRTKLNNMWYPCGMMMGDDKAKATVDAMMG-GLLAGVSKYSLEKGIASSVVQKKGDLIRQVSAAYPQLKGK--DLTFGFKIVYQDLEEKLGKQAVTEITKDMTLGPLDSMKKKMG 402
E G+P F +FVR+K+ +WYPCG GDD++ A GLLAG+SK L+ G++ S+ + L+ V YPQLK DL FG+K+ Y+ L E+ K +T + + G D++K G
Sbjct: 5 EDGLPIFNLFVRSKVAEVWYPCGSFKGDDRSAALASNYRDQGLLAGLSKNQLDSGVSGSLYRDMNKLVDTVVRGYPQLKKSRDDLEFGYKLAYEGLGEEQKK--ITVVKPEEKKGVFDNIKSMFG 127
BLAST of mRNA_H-paniculata_contig7318.15288.1 vs. uniprot
Match: A0A7S3P7F3_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P7F3_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 2.920e-17 Identity = 53/121 (43.80%), Postives = 71/121 (58.68%), Query Frame = 1
Query: 37 ESGMPAFQIFVRTKLNNMWYPCGMMMGDDKAKATVDAMM-GGLLAGVSKYSLEKGIASSVVQKKGDLIRQVSAAYPQLK-GKD-LTFGFKIVYQDLEEKLGKQAVTEITKDMTLGPLDSMK 390
+ G+P F +FVRTKL N+WYPCG GDD++ A + GGLLAG+SK L+ GIA S+ + L V AYPQLK KD FG+K+ Y+ L ++ T K+ G LD +K
Sbjct: 79 QDGLPVFNLFVRTKLANVWYPCGSFKGDDRSAALAKSWADGGLLAGISKKQLDSGIAGSLYRDLPKLKETVVRAYPQLKKNKDSFEFGYKLGYEGLSKEQSSTVFTVEPKEQK-GVLDGIK 198
BLAST of mRNA_H-paniculata_contig7318.15288.1 vs. uniprot
Match: A0A7S3DVU2_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DVU2_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 3.560e-17 Identity = 49/121 (40.50%), Postives = 72/121 (59.50%), Query Frame = 1
Query: 37 ESGMPAFQIFVRTKLNNMWYPCGMMMGDDKAKATVDAMM-GGLLAGVSKYSLEKGIASSVVQKKGDLIRQVSAAYPQLK-GKD-LTFGFKIVYQDLEEKLGKQAVTEITKDMTLGPLDSMK 390
E G+P F +FVRTK N+WYPCG GD+++ A + GG L+G+SK L+ GIA S+ Q + L + +PQLK KD FG+K+ YQ L E+ + + K+ + GPLD ++
Sbjct: 88 EDGLPVFNLFVRTKRANVWYPCGSFKGDERSAALAKSYSEGGFLSGISKKQLDGGIAGSLWQDQAKLKESIVRGFPQLKKSKDEFEFGYKLGYQGLSEEKSDEMFIVVPKEQS-GPLDGLR 207
BLAST of mRNA_H-paniculata_contig7318.15288.1 vs. uniprot
Match: A0A1Z5KGR4_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KGR4_FISSO) HSP 1 Score: 88.6 bits (218), Expect = 1.270e-16 Identity = 51/121 (42.15%), Postives = 73/121 (60.33%), Query Frame = 1
Query: 37 ESGMPAFQIFVRTKLNNMWYPCGMMMGDDKAKATVDAMM-GGLLAGVSKYSLEKGIASSVVQKKGDLIRQVSAAYPQL-KGKD-LTFGFKIVYQDLEEKLGKQAVTEITKDMTLGPLDSMK 390
+ G+P F +FVRTK NMWYPCG GDD++ A + GLLAG+SK L+ GIA S+ + L + A+PQL K KD L FG+K+ ++ L+E+ K+ K+ G LD++K
Sbjct: 88 DDGLPVFNLFVRTKRGNMWYPCGSFKGDDRSAALTKSWADNGLLAGISKKQLDGGIAGSLYRDLDKLKETILRAFPQLRKSKDELEFGYKLSFKGLDEEKAKEIFVVEPKE-NKGVLDNIK 207
BLAST of mRNA_H-paniculata_contig7318.15288.1 vs. uniprot
Match: A0A6T9ZNM7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A6T9ZNM7_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 2.590e-16 Identity = 50/119 (42.02%), Postives = 69/119 (57.98%), Query Frame = 1
Query: 43 GMPAFQIFVRTKLNNMWYPCGMMMGDDKAKATVDAMM-GGLLAGVSKYSLEKGIASSVVQKKGDLIRQVSAAYPQLKGK--DLTFGFKIVYQDLEEKLGKQAVTEITKDMTLGPLDSMK 390
G P F +FVRTK +WYPCG GD+++ A + GGLL+G+SK L+ GIA S+ L V AYPQL+ + +L FG+K+ YQ L E K V K+ + GPLD ++
Sbjct: 95 GFPVFNLFVRTKSQKIWYPCGSFKGDERSAALSKSYSEGGLLSGISKKQLDGGIAGSLYSDLNKLKETVMRAYPQLRKQRDNLEFGYKLNYQGLPEDKAKAIVPVEPKEQS-GPLDGLR 212 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7318.15288.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7318.15288.1 >prot_H-paniculata_contig7318.15288.1 ID=prot_H-paniculata_contig7318.15288.1|Name=mRNA_H-paniculata_contig7318.15288.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=134bp MQYREQKKVLESGMPAFQIFVRTKLNNMWYPCGMMMGDDKAKATVDAMMGback to top mRNA from alignment at H-paniculata_contig7318:593..5032+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7318.15288.1 ID=mRNA_H-paniculata_contig7318.15288.1|Name=mRNA_H-paniculata_contig7318.15288.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4440bp|location=Sequence derived from alignment at H-paniculata_contig7318:593..5032+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7318:593..5032+ >mRNA_H-paniculata_contig7318.15288.1 ID=mRNA_H-paniculata_contig7318.15288.1|Name=mRNA_H-paniculata_contig7318.15288.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=804bp|location=Sequence derived from alignment at H-paniculata_contig7318:593..5032+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |