mRNA_H-paniculata_contig7304.15276.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig7304.15276.1
Unique NamemRNA_H-paniculata_contig7304.15276.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig7304.15276.1 vs. uniprot
Match: A0A6H5JDK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDK4_9PHAE)

HSP 1 Score: 325 bits (833), Expect = 5.000e-104
Identity = 154/249 (61.85%), Postives = 191/249 (76.71%), Query Frame = 3 
Query:  174 PEDETLVCNVGSACLEEYRSANGSHDKVWPEADGKLRQSRIRAEYSRLRLNKYQPVIVPTFTEVGYKKEKLNPETYAAVMEWYVKEADNQ--VVESWPQDNTYFNHWKVDSVMTTAPSSVRKRLYRDLLPLMEQWTGLSLNPTACYGVRTYPRDSVLANHVDRVDTHVISAIINLAQSGVDKDWPLFVRGHDGKDNEIFIQPGEIIFYESASVLHGRPTPFKGDAFANIFVHFAPTKEWDISSQDVSRA 914
            P DE  VCNVGS+C  EY  ANG+ +K+W E  G +   RI +E SR+ LN+YQPV VP FTE+GYKKEKLNP+TYA +MEWY  + +N+  V E W  DNTY NHW+VD+ MT AP+ + +RLY+DLLP+ME+W+G+ L  TACYGVR Y R S+LANHVDRVDTHVISAIIN     VD DW L+VRGHDG   ++FI+PGEIIFYESASV+HGRP  F+G  FANIFVHF+P + WD++++DV RA
Sbjct:   37 PNDEFAVCNVGSSCRGEYNRANGTLNKMWQEEIG-IVWKRINSERSRVMLNEYQPVTVPKFTELGYKKEKLNPDTYAYLMEWYHSQMENKAPVTEKWAPDNTYVNHWEVDTKMTAAPTRIHRRLYQDLLPVMEEWSGIKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIIN---ENVDTDWGLYVRGHDGVARDLFIEPGEIIFYESASVIHGRPQAFQGSRFANIFVHFSPAEGWDVTTKDVQRA 281
[Close]
BLAST of mRNA_H-paniculata_contig7304.15276.1 vs. uniprot
Match: D7FHL7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL7_ECTSI)

HSP 1 Score: 288 bits (736), Expect = 8.130e-90
Identity = 141/249 (56.63%), Postives = 174/249 (69.88%), Query Frame = 3 
Query:  174 PEDETLVCNVGSACLEEYRSANGSHDKVWPEADGKLRQSRIRAEYSRLRLNKYQPVIVPTFTEVGYKKEKLNPETYAAVMEWYVKEADNQ--VVESWPQDNTYFNHWKVDSVMTTAPSSVRKRLYRDLLPLMEQWTGLSLNPTACYGVRTYPRDSVLANHVDRVDTHVISAIINLAQSGVDKDWPLFVRGHDGKDNEIFIQPGEIIFYESASVLHGRPTPFKGDAFANIFVHFAPTKEWDISSQDVSRA 914
            P DE  VCNVGS+C +EY  ANG+ +K+WPE  G +   RI  E +R++LN+YQPV VP FTE+GYKKEKLNP+TYA +MEWY  + +N+  V E W  DNTY NHW+V + MTTAP  + +RLY+DLLP+ME+W+G  L  TACYGVR Y R S+LANHVDRVDTHVISAIIN+ Q                        PGEIIFYESASV+HGRP  F+G  FANIFVHF+P + WD+++  V RA
Sbjct:   37 PNDEFAVCNVGSSCRDEYNRANGTLNKMWPEETG-IAPKRINGERNRVKLNEYQPVTVPKFTELGYKKEKLNPDTYAYLMEWYHGQMENKMPVTEKWALDNTYVNHWEVGTKMTTAPMRIHRRLYQDLLPVMEEWSGTKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIINVEQ------------------------PGEIIFYESASVIHGRPQAFQGSRFANIFVHFSPAEGWDVTANTVERA 260
[Close]
BLAST of mRNA_H-paniculata_contig7304.15276.1 vs. uniprot
Match: A0A7S4KHC4_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KHC4_9EUKA)

HSP 1 Score: 171 bits (432), Expect = 2.610e-44
Identity = 85/200 (42.50%), Postives = 118/200 (59.00%), Query Frame = 3 
Query:  303 EYSRLRLNKYQPVIVPTFTEVGYKKEKLNPETYAAVMEWYVKEADNQVVESWPQDNTYFNHWKVDSVMTTAPSSVRKRLYRDLLPLMEQWTG--LSLNPTACYGVRTYPRDSVLANHVDRVDTHVISAIINLAQSGVDKDWPLFVRGHDGKDNEIFIQPGEIIFYESASVLHGRPTPFKGDAFANIFVHFAPTKEWDISS 896
            E  R+ LN+ QP+  P FTEVGY   KL+   +  +  +Y      Q  E+W   + + NHW+  + M     S+R+R+    +P++E W G    L  TA YG+RTY  +S L NHVDR  TH +S II + Q   D DW L V GHDGK  E+ + PG+++ YESASV+HGRP P  G+ +AN+FVHF P   W++ S
Sbjct:  157 EKRRIWLNRNQPLKTPKFTEVGYAYSKLSDSLFDDLFNYYHDNKHRQTFENWRPADHHVNHWESPTYMLPLTQSLRQRVIDYCVPILETWIGGETPLEFTALYGIRTYSNESYLLNHVDRSATHAVSVIIQVDQKVTD-DWLLEVHGHDGKVEELPMAPGQMVLYESASVIHGRPKPLNGEYYANVFVHFRPKNGWNLDS 355
[Close]
BLAST of mRNA_H-paniculata_contig7304.15276.1 vs. uniprot
Match: A0A835YWU1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWU1_9STRA)

HSP 1 Score: 169 bits (428), Expect = 1.010e-42
Identity = 86/223 (38.57%), Postives = 136/223 (60.99%), Query Frame = 3 
Query:  225 YRSANGSHDKVWPEADGKLRQSRIRA----EYSRLRLNKYQPVIVPTFTEVGYKKEKLNPETYAAVMEWYVKEADNQVVESWPQDNTYFNHWKVDSVMTTAPSS--VRKRLYRDLLPLMEQWTGLSLNPTACYGVRTYPRDSVLANHVDRVDTHVISAIINLAQSGVDKDWPLFVRGHDGKDNEIFIQPGEIIFYESASVLHGRPTPFKGDAFANIFVHFAPT 875
            +R+ N  +  +    + +L +  IRA    E  R+R N  QPV +P FT+VG+KK ++  + +  ++ +Y +   N  +E W + N Y N+ +  S M   P +  ++  ++  L P++E+W+G+ L  T+CYG+R Y R S LANHVD   TH ISAIIN+ Q  V+KDWPL +  H G D+ I + P +++ YESA+ +HGRP+ F G  +AN+F+H+ PT
Sbjct:  234 HRNCNIENCGIVERKEVELDEEEIRAREQNEKFRVRNNVQQPVGLPRFTDVGFKKIRVPDDVWDMLVTYYRQNKQNPKIERWGKGNVYTNNLEAPSYMVNLPETGPLKPAIFNGLRPILEEWSGVELVSTSCYGIRAYTRGSWLANHVDTRATHTISAIINVDQE-VNKDWPLNIFDHAGNDHNITMAPRDMVLYESATCVHGRPSTFDGQFYANMFIHYKPT 455
[Close]
BLAST of mRNA_H-paniculata_contig7304.15276.1 vs. uniprot
Match: A0A7S2THP0_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2THP0_9EUKA)

HSP 1 Score: 165 bits (418), Expect = 3.340e-42
Identity = 84/241 (34.85%), Postives = 133/241 (55.19%), Query Frame = 3 
Query:  192 VCNVGSACLEEYRSANGSHDKVWPEADGKLRQSRIRAEYS-----RLRLNKYQPVIVPTFTEVGYKKEKLNPETYAAVMEWYVKEADNQVVESWPQDNTYFNHWKVDSVMTTAPS-----SVRKRLYRDLLPLMEQWTGLSLNPTACYGVRTYPRDSVLANHVDRVDTHVISAIINLAQSGVDKDWPLFVRGHDGKDNEIFIQPGEIIFYESASVLHGRPTPFKGDAFANIFVHFAPTKEW 884
            V   G  C E Y       +      DG++R+++++  +      R + N+ QP  +  FTE+G++K K+  + +  +  +Y    D+ V+E WP  N Y NHW+    M   P        +++++  L P +E+W+G  L  T  YG+R Y  ++ L NHVDRV THV+SAI+++A    D  WPL +  H G ++ I I PGE++ YESA+ +HGRP+ F+G+ + N F HF P K W
Sbjct:   97 VAQCGHPCHEHY-----GEEPCLERLDGRIRRAQLQPVWDSQNEDRRQTNRIQPQNLKNFTELGFEKRKIPDDVWELLRSYYENNKDSIVLEKWPSTNPYINHWESVPFMIWLPELHTGDETKRKIFEGLRPHLEEWSGTELEHTDLYGMRVYKNNTFLENHVDRVATHVVSAIMHIADKQ-DIPWPLNIYDHYGNEHNITISPGEMVLYESATCVHGRPSLFQGEYYVNAFAHFRP-KNW 330
[Close]
BLAST of mRNA_H-paniculata_contig7304.15276.1 vs. uniprot
Match: A0A7S2MSB8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MSB8_9STRA)

HSP 1 Score: 163 bits (413), Expect = 1.970e-40
Identity = 81/199 (40.70%), Postives = 120/199 (60.30%), Query Frame = 3 
Query:  297 RAEYSRLRLNKYQPVIVPTFTEVGYKKEKLNPETYAAVMEWYVKEADNQVVESWPQDNTYFNHWKVDSVMTTAPSSVRKRLYRDLLPLMEQWTG-LSLNPTACYGVRTYPRDSVLANHVDRVDTHVISAIINLAQSGVDKDWPLFVRGHDGKDNEIFIQPGEIIFYESASVLHGRPTPFKGDAFANIFVHFAPTKEWDI 890
            R+  +R+ L+  Q   VP+ TE G+ K++L P T+A V ++Y +  +  +          +N   + +  T  P  ++  ++ +L  LME W G + L  T+CYGVRTY   S L  HVD   THVIS I+N+AQ  V K WPL +  H+GK +E+ + PG+++FYESA +LHGRP P +G  +ANIFVH+ P K WD+
Sbjct:  291 RSLETRMALSDVQSHFVPSLTEEGFYKDRLPPTTFARVTKFYEENYNTSMTNEEYDGGPLYNQRTIPTYHTPLPHRLQNDIFMELKDLMEVWAGGMKLKGTSCYGVRTYSPGSYLHLHVDTAQTHVISGIVNVAQE-VSKPWPLEILDHEGKLHEVNMDPGDLLFYESAKLLHGRPQPLEGQFYANIFVHYVPEKGWDV 488
[Close]
BLAST of mRNA_H-paniculata_contig7304.15276.1 vs. uniprot
Match: A0A7S2U6L2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U6L2_9STRA)

HSP 1 Score: 160 bits (406), Expect = 1.910e-39
Identity = 89/228 (39.04%), Postives = 130/228 (57.02%), Query Frame = 3 
Query:  219 EEYRS-ANGSHDKVWPEADGKLRQSRIRAEYSRLRLNKYQPVIVPTFTEVGYKKEKLNPETYAAVMEWYVKEADNQVVESWPQDNTYFNHWKVDSVMTTAP--------SSVRKRLYRDLLPLMEQWTGLSLNPTACYGVRTYPRDSVLANHVDRVDTHVISAIINLAQSGVDKDWPLFVRGHDGKDNEIFIQPGEIIFYESASVLHGRPTPFKGDAFANIFVHFAPT 875
            EEY +  NG  D       GK+       E  R+ ++  QP  +  +T+VG+KK +     Y  V E++ K  + Q  E+WP+ NTY NHW   + M +          S ++++L+     ++E+WTG  L   + YG+R Y   ++LA HVDR+   V SAIIN+AQ  +D+ WP+ V GHDGK   + + PG+++ YES SVLHGRP P KG  +ANIF+HF PT
Sbjct:   90 EEYNNFLNGCMDHY-----GKIGHVCRSTEVERVAMSLRQPQAMQNYTDVGFKKLRAPEGLYKMVKEFWDKNKNTQSDENWPKGNTYTNHWVAPTYMVSVEDRSLRGGGSKLKQKLWDAARSVLEEWTGEELEQCSLYGIRVYTEGAMLATHVDRMPL-VSSAIINVAQD-LDEPWPIEVYGHDGKATNVTMMPGDMVLYESHSVLHGRPFPLKGRFYANIFIHFEPT 310
[Close]
BLAST of mRNA_H-paniculata_contig7304.15276.1 vs. uniprot
Match: A0A6H5KTG8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTG8_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 6.000e-39
Identity = 78/213 (36.62%), Postives = 127/213 (59.62%), Query Frame = 3 
Query:  240 GSHDKVWPEADGKLRQSRIRAEYSRLRLNKYQPVIVPTFTEVGYKKEKLNPETYAAVMEWYVKEADNQVVESWPQDNTYFNHWKVDSVMTTAPSS--VRKRLYRDLLPLMEQWTGLSLNPTACYGVRTYPRDSVLANHVDRVDTHVISAIINLAQSGVDKDWPLFVRGHDGKDNEIFIQPGEIIFYESASVLHGRPTPFKGDAFANIFVHFAP 872
            G+ +      D   R +R + +  RL  N+ QP  +P FTEVG+KK  +  + +  V  +Y +  ++   E W ++N + N+ +  S M   P +  ++++++  L P++E+W+G+ L  TACYGVR Y   S LANHVD   TH +S I+ + Q  V++DWPL +  H G D  I ++P +++ YESA+ +HGRP+ F G+ +AN FVH+ P
Sbjct:  245 GTSEGTETPQDVASRNARKQMDQGRLVNNRKQPEGLPRFTEVGFKKTTVPDDVWDLVKTYYEENKESPKKEKWSKNNVFTNNVEAPSYMVNLPENGKLKEQIFGGLRPILEEWSGVELVQTACYGVRVYTNTSWLANHVDTKATHAVSVIMQVDQD-VEEDWPLMIYDHAGNDYNITMKPRDLVLYESATCVHGRPSTFHGNYYANAFVHYKP 456
[Close]
BLAST of mRNA_H-paniculata_contig7304.15276.1 vs. uniprot
Match: K0RWS5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RWS5_THAOC)

HSP 1 Score: 160 bits (405), Expect = 1.130e-38
Identity = 81/209 (38.76%), Postives = 124/209 (59.33%), Query Frame = 3 
Query:  282 RQSRIRAEYSRLRLNKYQPVIVPTFTEVGYKKEKLNPETYAAVMEWY------------VKEADNQVVESWPQDNTYFNHWKVDSVMTTAPSSVRKRLYRDLLPLMEQWTGLSLNPTACYGVRTYPRDSVLANHVDRVDTHVISAIINLAQSGVDKDWPLFVRGHDGKDNEIFIQPGEIIFYESASVLHGRPTPFKGDAFANIFVHFAP 872
            + S  ++E  RL +N  QP  +  +TE+G+KK +   E  + + +++            V +A N   E W   +TY NHW   ++M     S+R   +    P++E+W+G+ L  ++ YG+R Y + ++LA HVDR+   V+SA+IN+AQ GV + WPL + G DG+   +  QPGE+I YES S++HGRP PF GD FAN+FVHF P
Sbjct:  166 KDSCFKSEAERLSMNLRQPQSMRNYTELGFKKIQAPNELVSRLTKFWNDGRNFRHLQENVVQAPNVNFERWEDGSTYVNHWTSPTMMMNLDQSLRDLTWDTTKPILEEWSGVELVQSSLYGIRIYKKGAILAPHVDRLPL-VLSAVINVAQEGVKEPWPLELIGRDGRAYNVTCQPGEMIMYESHSIIHGRPFPFSGDNFANVFVHFEP 373
[Close]
BLAST of mRNA_H-paniculata_contig7304.15276.1 vs. uniprot
Match: A0A482SEQ1_9ARCH (Ankyrin repeat domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SEQ1_9ARCH)

HSP 1 Score: 158 bits (400), Expect = 2.130e-38
Identity = 81/211 (38.39%), Postives = 124/211 (58.77%), Query Frame = 3 
Query:  303 EYSRLRLNKYQPVIVPTFTEVGYKKEKLNPETYAAVMEWYVKEADNQVVESWPQDNTYFNHWKVD-SVMTTAPSSVR------KRLYRDLLPLMEQWTGLSLNPTACYGVRTYPRDSVLANHVDRVDTHVISAIINLAQSGVDKDWPLFVRGHDGKDNEIFIQPGEIIFYESASVLHGRPTPFKGDAFANIFVHFAPTKEWDISSQDVSRA 914
            E++RL +N  QP     +TEVG+KK  +    +  ++ +Y     N+  E WP+ + Y NHW    S+++   SS+R      + ++  + P++E+W G  + PT+ YG+R Y   S+LA HVDR+   V SAII +AQ  +D+ WP+ V  H GK + I +QPG+++ YES +VLHGRP P KG  +AN+FVHF P     ++  D   A
Sbjct:   73 EHARLEMNLDQPAKQHNYTEVGFKKITVPKSAWDPLLHFYKNNVQNEKPEKWPKGSIYVNHWVAPPSMISFEDSSLRGGVQLKQLIWNTVKPIIEEWVGRVVEPTSLYGIRVYKNQSILATHVDRLPL-VSSAIIQVAQD-IDEPWPIEVYDHSGKAHNITMQPGDMVLYESHTVLHGRPFPMKGRYYANVFVHFQPVDHEQMNKADEQEA 281
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7304.15276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JDK4_9PHAE5.000e-10461.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHL7_ECTSI8.130e-9056.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4KHC4_9EUKA2.610e-4442.50Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
A0A835YWU1_9STRA1.010e-4238.57Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2THP0_9EUKA3.340e-4234.85Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S2MSB8_9STRA1.970e-4040.70Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2U6L2_9STRA1.910e-3939.04Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A6H5KTG8_9PHAE6.000e-3936.62Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
K0RWS5_THAOC1.130e-3838.76Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A482SEQ1_9ARCH2.130e-3838.39Ankyrin repeat domain-containing protein n=1 Tax=a... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7304contigH-paniculata_contig7304:306..10827 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score172.9
Seed ortholog evalue2.2e-40
Seed eggNOG ortholog227086.JGI_V11_89476
Hectar predicted targeting categorysignal peptide
EggNOG OGs2DE90@1,2S5PQ@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-24_004100.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1768
Cds size915
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7304.15276.1prot_H-paniculata_contig7304.15276.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig7304 380..10048 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930891.6279387-UTR-H-paniculata_contig7304:305..3791622930891.6279387-UTR-H-paniculata_contig7304:305..379Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7304 306..379 +
1691481498.8414714-UTR-H-paniculata_contig7304:305..3791691481498.8414714-UTR-H-paniculata_contig7304:305..379Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7304 306..379 +
1622930891.969814-UTR-H-paniculata_contig7304:10048..108271622930891.969814-UTR-H-paniculata_contig7304:10048..10827Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7304 10049..10827 +
1691481498.9293542-UTR-H-paniculata_contig7304:10048..108271691481498.9293542-UTR-H-paniculata_contig7304:10048..10827Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7304 10049..10827 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930891.872299-CDS-H-paniculata_contig7304:379..4901622930891.872299-CDS-H-paniculata_contig7304:379..490Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7304 380..490 +
1691481498.8536105-CDS-H-paniculata_contig7304:379..4901691481498.8536105-CDS-H-paniculata_contig7304:379..490Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7304 380..490 +
1622930891.8832161-CDS-H-paniculata_contig7304:2423..26001622930891.8832161-CDS-H-paniculata_contig7304:2423..2600Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7304 2424..2600 +
1691481498.8638089-CDS-H-paniculata_contig7304:2423..26001691481498.8638089-CDS-H-paniculata_contig7304:2423..2600Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7304 2424..2600 +
1622930891.8967273-CDS-H-paniculata_contig7304:5536..57071622930891.8967273-CDS-H-paniculata_contig7304:5536..5707Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7304 5537..5707 +
1691481498.8748877-CDS-H-paniculata_contig7304:5536..57071691481498.8748877-CDS-H-paniculata_contig7304:5536..5707Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7304 5537..5707 +
1622930891.91003-CDS-H-paniculata_contig7304:6468..66331622930891.91003-CDS-H-paniculata_contig7304:6468..6633Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7304 6469..6633 +
1691481498.8977377-CDS-H-paniculata_contig7304:6468..66331691481498.8977377-CDS-H-paniculata_contig7304:6468..6633Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7304 6469..6633 +
1622930891.9302998-CDS-H-paniculata_contig7304:8761..88331622930891.9302998-CDS-H-paniculata_contig7304:8761..8833Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7304 8762..8833 +
1691481498.909361-CDS-H-paniculata_contig7304:8761..88331691481498.909361-CDS-H-paniculata_contig7304:8761..8833Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7304 8762..8833 +
1622930891.949531-CDS-H-paniculata_contig7304:9829..100481622930891.949531-CDS-H-paniculata_contig7304:9829..10048Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7304 9830..10048 +
1691481498.9191568-CDS-H-paniculata_contig7304:9829..100481691481498.9191568-CDS-H-paniculata_contig7304:9829..10048Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7304 9830..10048 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig7304.15276.1

>prot_H-paniculata_contig7304.15276.1 ID=prot_H-paniculata_contig7304.15276.1|Name=mRNA_H-paniculata_contig7304.15276.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=305bp
MVCGLTRATVSLGLCCVVATPGVTAGAEQEWHIPEDETLVCNVGSACLEE
YRSANGSHDKVWPEADGKLRQSRIRAEYSRLRLNKYQPVIVPTFTEVGYK
KEKLNPETYAAVMEWYVKEADNQVVESWPQDNTYFNHWKVDSVMTTAPSS
VRKRLYRDLLPLMEQWTGLSLNPTACYGVRTYPRDSVLANHVDRVDTHVI
SAIINLAQSGVDKDWPLFVRGHDGKDNEIFIQPGEIIFYESASVLHGRPT
PFKGDAFANIFVHFAPTKEWDISSQDVSRAEAEERKMQRLARRAEEEAAR
TDEL*
back to top

mRNA from alignment at H-paniculata_contig7304:306..10827+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig7304.15276.1 ID=mRNA_H-paniculata_contig7304.15276.1|Name=mRNA_H-paniculata_contig7304.15276.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10522bp|location=Sequence derived from alignment at H-paniculata_contig7304:306..10827+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCCTTTTACCCATCAACCTTTACGCATAATATGTCAACCAGCTCGCGTCC
CGTGAGAATCCGAAGATCGTCACGATGGTGTGTGGGTTGACTCGGGCAAC
GGTCTCTCTCGGTTTATGTTGCGTGGTGGCCACGCCAGGTGTGACTGCTG
GTGCGGAGCAGGAGTGGCATATACCAGAAGATGAGGTATCGTTTACAACC
AGACATCATGTTCTGAAGCGCTGTAGTGGAGGGCATCTTTGCTACAGTAT
TCTGATGCCATGACAATCTCCGCGACAATTCCGCACGGAACGCATGGAAG
CTGTGCGTGTTGAATGGTAGAGTAGCTGGTACTACCTCCTACCGTTGTGT
TGAGCTTGAATAGTCAGGCACGGGTGCCTCCTTTCCTCGAAATAGGGATT
TTAATTGGTGCAGTGCCCCATGTGCGTGCTGGCCCCGGTATGCGATATCA
AGATGTGTACATACATGGTTGAGTTATCACATCAACATTGCAAGAGACAG
CACACACCACTTTCACAGACGTGAAGAGAGATGCAGAACAGCCAGTTAGT
GGATCGTTCAATCCAAAGCAAGAAAAGGCCCCCTCCCCTCCACCGCCCTT
TCCTTGCACTTGGGACAGGAGCACCATACAGGTTAGTCCGAGGATAACCT
TGGCCATGTGACATGCACCCCTTGGTGATGATACTCCTCAAGCGTACATT
TACCTTGGATCTATATCCGCTCCGTACAACCCAGAAGCTCCCAAACCACC
ACAAACATCCCTCCTGACGAGTAGTTGAAAGAAATGAATTGATTTTTTCC
CTACCGAATGCAAGTGGTGCGGATCAATCATGGTTTGTGGACTGCCCAAG
CTCCAAAGCCACACGTTGGGCGATGCTAAGTATGGTGCAGTGCAGTGCAG
TTCTAGCGTGCAGTGCAGTTCTAGCGTGCATCTAGTTCAACGAAAAGTTG
TTCCGGGTGAAGCAGATCTGAACGGCACACATTGGTATCAATCGATTCCT
CCTCCGTTTTTGCGTTTAGCCCCCACGTTGGAGTTAATGTTTCGATCGAT
TGCTCGACTGTTCCGTTGTCGTGGAGGCTGCCGCCAAACTTTTGAATTTT
CTGGCGCCAGCTGTTGATTGCTCACGCACATCGGATTGTAAAAGCGTGGC
TTAGATCAACTTTAGTGGCACGAGAACGAAAACGGAGACCAGGTTTGTAG
ACATGGGTATGGTCTTTCCGAAAGCGCGGGGTAACGTGACTTGGACCACT
CGTTGTGAGCATTTCGCATTTAGACTACAGTCGTGCACCTTCATCAGGTA
TAGGCGCAAGAAACACTGAAAACCTTGTTTTCCCCTCTGCTAGCCACGAA
ATTCACTCCAACAACATACGGCCTACGCAATTGTACGAGGGCTACACCGC
GGGCTATCTATCGCATGCATGTCTGAGTGAAGGGTGTATAGCTTTCACGG
TCACCTCACTCTATCAATGACCCACGGAAGCTAGCAACAAATTCTAGATT
GCCCTGAACCATCTGCGACTGGTCTAAATAATAAATAATAATGAAGCGAG
TGATAAACACGTGATTAGCACTTGATTTACTTTATTTGTCATTCCTCACA
TTCTGAACCTTCGGGCGAACATTTTATTCATTGAGTCGCATTCACCCTGG
GTGGGAAAAATTGTAAGGATAAGGTATTCCCTCAAAAGCTACAAATAAGC
GACCTCAACGATTTCTGGGCATTACAAGGAAAAGAAGAAGAAATTTTAGA
GCAAGGCAGGCACGTACTCATTTCTGGAAGAATCGGAAATTCCTCTTTTG
CCTCGAGCGGACTGTATCGATATCACTATTTTTATTCTATGATTTTCATT
CCAAAGGTCATTATTTGCGTTCTCAGTTCAAGCAGGAATTCCCTTAAAAA
GCAAACTACTCCTGGTGCATGTTATTCCGTAACTCTTTGACCGCGAGTCC
ATGCAGCCCATTCGCATCCATTTTTTTATCCCAACGAGTGATCTAACTGT
CTTTTTTTTTTGTTAGCGATTATTCATGCAGTGAAAATGGGTTCAATTAT
ACATCCTTTTCATATATATTTTTTTATCTTTTGATCACTTTTTTTTCCCT
CCGTTTATTTCGTTCCAGACGCTCGTATGCAACGTAGGCTCTGCCTGTCT
GGAAGAGTACCGGAGCGCAAATGGCAGTCATGACAAGGTGTGGCCTGAAG
CCGATGGGAAGCTGCGGCAAAGTCGTATCAGAGCCGAGTATTCCAGACTG
AGACTCAACAAGTACCAACCAGTGATCGTGCCCACCTTCACTGAGGTGAG
GAGCGTACCGCGGTGATGATAGAGTTGAGGGCGAGGGCGGGTACATGAAA
TAGTTTTTACCTGAATGAAGAACATTCAGCCCCTAAAATAGCTCCCATCG
TTGACCCACCGAGGTTCTCATTTCAATGTCAACCCATCTGCCCGAGATAA
TAGAACTGAGCTCTAACGCTCATATAATCATTCCTTTGCACCCGTGTCGA
GGTCGTGCAGCCGACCTTGAACTTGACTTGTGTACACTTGAACCAGCGAA
ATGAAATCAAGTAGGGGTGTACTCGTTGGTGAGTCGAAGCCACTTCCCCC
AACATAGTGTTAGATCTACAACACCGGTATAATAGTTCCAACGTACTAGC
CATGTGGAGATTGTTGCCGCTAGCCTCAAATTTTTGTTGTGTATATGTGT
CATCAAAATTAGAGGTAAGAACAAGGGGAACGGTACTCCATGTCTTGCAT
GCCGAAACTGTTGGGGCATTGACCACGCATTCTCGAGAGGATGGAGCTCA
ATAGGGAGCGAGGAGCGGGGTGCTCATGTTTCATGCTTGATGCTGTAAAT
ATTTGTTGTACTATTGACAACGCGTTCTCGAGGTCACGCTAACTCTGTTC
TCTGTTGTGTTCTCTTTGTCTTTCGTTCTGATGTGTGCTTGGACCTGTCT
GCTTGCTCTTATGAGCACTCGTTTTCAACCTTACCCAAGGAGCCAGCCCC
TGTGGTAATAGAAGGGAGTACATGGACACACGCATATACCCCTTGCTATA
AGGGGAGAGAGCGTCATGGAACATATATTTACTACTGTAGGTGTGAAATT
CGCGATCTTGTGTGATGAAATACATTTTGAGCAGTGGCATGAGCAACGCC
CCGCGAGGCGAAGTTTGTTTTATCCTCGATTTTTACTTGCAAGCTACGTG
ACGGTACTGTTTCGTGGTACCGAACGTTGTGTCATTTGAAGGAGATCAAT
CCATCTGTTCGAGATCTCTTCGATCGACGTCCTCCTTTCGAACACACATG
GACGACGCTGTAGGTAAGATTGAATTCGGAAAATGTTGGCCATCTGGGGC
GTTCTGGCAACGTTCTATATTCGTTGCTGGAAGCTCAGGTGATACAAGGT
TCAATCGATACACACCCATTTGTGTAAGGAAGTAGATGATGAAGATGGAG
AACTGAATTAGATGGGGATGCCCTCTAGAAGTAAGCCATTGACACACTAA
TTAGGTCTTATCCCAATGGACATATGCACCTCCTGCGTCATGATCTTAAC
AATCCTAACTTAGGTGAATAGGCCACATTATATACCATTGACAGTACCCA
GAATCACCAAAATGAACACTGTACAGTTATATCATGCGTGAATTTTTCCC
GTCGGTTGGAAATAGGGCATTCTGAAACCAGATGCAGAAATCGAAGCAAT
TATAGTCAGCGCTCACTGGCGGAAACAGAGAGAAAGCTGTTGATAGCACT
CTCTGCACATACAAGTTGGAAAATGACAAAATTCTTCTCGATCTACTCAT
AATCCCCCATCTTGTAATCAAGATCTGGTTGCTACTACTGTGATTGTAGG
GGCATCACGTGAATGGGTATTTTGTTTGGCCAAATAGATCATTATCCCCC
CGTGATTGAGGTTCCGGGAAATCGCGTTTGAGTGTACGATATGAAGAGAG
GAAGCGACCCGTGTACTTATTAATAAGGTTTTAGGGGTCATAGTTGTTCT
TTGATTATTTTGGAGTATGACACTATCCTGAGGTTGGCTACCCAAACAGC
TTGACCCTGTTAACCTCTATGACTAGCGCGCCACTTGGTCATCATATATT
TTGTGGCCCTAATACATGGTTGACAGCTTGGTATTATGTACGTACCCCAT
CTCTCTCATTAGTTAAGGAGATTATAGGATGTTGCAGTCATAACGTTTGC
GAGTTTGAGATTCACCGACAGCCAAGCACACTGTTCGAACGCTCTGGGTT
TTGGCTATCTCCTAGATACCTCCAACGTATTATTTCAAAAATAATCTGTT
TAGATCTTGTCTCCTGAACGTATTTGATAATCGTCGGGTGTTGTCATTTT
TGCGAAGACGGCCGAAAAATCGTCCACAGTACTTGGCATGGCACTTGTGC
GGCGGTAACATCTCAACGAGACCCCCGATGAAGAAGCGGTATGATTGGCT
GTCGGTGAATCTCAAATTCGTAAACGCTATGACAGTAAAACCCGAATCCC
CTAGATTTCCGAGACAGAGGATTACAGATAATCACGCTCCGGGTTCGGTG
CAGGTCAACGGAGAAGACTGGCGCTCGGAAAAGGCCCCAATATGTTTCGT
TTTTTTTTGTTTATTTATCCCGAAGCGAGTATATATATATATATATATAT
ATATATATATATATATATGCGTACGTGGAGGAGTCGTGTTTTTGCTTGTT
GTGAAAATATCGTTTCCAATCTCGAGGAGAGGGTACTTTAGATACGGGGT
ACCCTTGTATAAGATAGGAGGCAGGTACCTTGCGCAAGATACAGGGTAGG
TGCCCTCATCGCAGGACGAGGTATTCCTGTTCCTTGGAGTATAACGTAAT
ATTTCTCACGGAAAGGAACGAGGGGTTAGACAGCGAGCGAAGCTCTTTCG
TCAGGGCTGTCGGAGAAATAACGAGAAGGGTTTTGTAAGAGTTGTTCATT
GCCGCAAGTTCAAGTATCTTTTTATATATAACTACCAAAAATCTACTTGA
TCGTACTTGCCTGTACTTTTCAGGTATTGTCCAACACTGTAAATATATAC
CGTGGGGACAAGATAAATATCCATCTTACATCAAACCATTACAAATATAT
ATATATATATATATATATTGTTCAACCATTTACTGACGGAAAAAAATAGC
AGCGTTGTCCCAATCAACCAATCAAGGGTTTAACTCCGTGTGGTCATGCT
CCACAAACACGAAACGTATTCAAATATTTAGGTGGGGTACAAGAAGGAAA
AACTCAACCCTGAGACCTACGCTGCCGTGATGGAGTGGTACGTGAAGGAG
GCAGATAATCAAGTAGTGGAAAGCTGGCCGCAGGACAACACGTACTTCAA
CCATTGGAAAGTCGATTCTGTCATGACCACTGCGCCGAGTTCCGTCAGAA
AGGTGAGGTAGGGTTGATACTGCTACATAGTCAGGAGACGCTCCATCTCG
CTAAATACGCCGCTTTGGCATATTGCCCAATTTTGGGACCAAATCTGGTG
TGGTGTTTTTGTCGATAACGTTCTACAGAAACATTGGTATGCGCAAAACC
AGATATCTCCGTAAAGCCCGAGAACGGATGCTTCCAACGAATCAAGAACG
AATCAAATATCACGTGTTTTGAAAACGTTACAACGACAAATGCTGTCATT
TGGCCCTAAATAATGGAATATGTTCGCTTTTGTGGACCTTTTTGGGGGTC
CTTTACTGCAAAGGAGCGTTCGCGTATTAAATTAAAAACAAAAAAAAACA
GAGCAATCAACCATGACGTGTTAATGTACGTGCTTTACCCTCCCCTCTCC
CTCCTCCACTATTTGAGCGAACAAATATGTGTAATGTTACGTGATTTTCG
AGTTGTCATCGTCCAGGGTTGTGTGGCTTTCATACGATTGACGCCAGGGT
AACGAAAGCCTACGGGTGGCTGCTCGTCAGCGACCATTTTCTTTTTTATG
ACCGCACCGAGAGGTGCTTCGTGCAAACGATTTTGCAACACATGAGCGTT
TTACCCTGCACATATCTAAAGCATGAATAGTGAAGTTACCGAATCCGTTG
CACGGCTACCGAATCCGCCTGAATCCGCTTGCCGTGTGTCTCCCTATTTT
CGCGCATCGATGTGTTCTGTTTTCTTTGTCTTTCTCGGTATTTTGTTTTT
CTGGCCACCTCAGCGTCTGTACCGCGATTTATTGCCCCTCATGGAGCAGT
GGACAGGGTTATCTCTCAACCCTACGGCGTGCTATGGCGTGCGTACCTAC
CCGCGCGATAGCGTGTTGGCCAATCACGTTGACCGCGTCGACACGCACGT
TATCTCTGCGATCATCAACCTCGCGCAAGTGAGAATTACGTATTGCAGGG
GGGTGGGGGGCGTAGTCATAATTTGCATGCCGTAGTCGTTGGACTGTTGA
CGACGCGTCCTCGGGAGGACGGGGTTTTGTCTCTATCTGGACGATTTCCG
GTGGCCAATTGCACTTTCCTACGTTGCCTGATGTGACACCAAAAAATGTT
TCACCTGCCGTGTCTACCTCAACCCTCGTCTGTTGAGACCAATTTCTGTC
TCCTAAAGCCGCCTCTTGGGGGGAGGGGATTGTCTGGGGGATTCAGATTT
CACAAGAGCAATGTGTTGACGCAATACGTATTTCCATTTCTTAATTTCTT
TCAATCTTGGCGTGTGCACCGGTGGGCTGTTACTGGTTTGCCTATTTCAG
CTCGTCTCTGAATTTGTGGGTTGTGAGCAAGTCTCGAAAGGTCCAGGCTC
CCCAGTCATCTGCACAATATCTAGCCGCAATGCAAAGTCATGTTCCAATT
TGGGGAAAGGAGATGGATGCCTGAATTTTGAATACCAACCCTGTTGGGAT
CCTAGGATTCTGTAGTCAGCTGTGTGGGGCTTGTTCATTATTTGGTCATT
CTCCACTCTCGCTCTATACTACTTTCAAGATAAATATCTCAAATGGCAAA
AAATGGCCAAGTATTTTGCAAATGAGATACAATTAATAGTTGTCTAGAGG
TGGTTTACGCGTTCTGTAGATGCATCGTCATTATATCAAGGGATTGGTCG
TTAGCAAAAAATATCATGATTTTCCATATCTAGAGGCTTCATTCATTTTG
TAGCTAGAGGTTGTTTTCTTGATATTTTGCAAGGCTCGCTTACCGCCTAC
GAAATGCAAAGACAAGTTGAGTTGGGCCGGCCAATGGCTTTGGCCACTTG
GCGCAAAACCACGAGTGAAAATTGCAAATGGATAATGTTTTTAGTTCGAA
CACTCTCATGTGGGGAGTACATACGTTCCTGACATCCCTGAGTTTTTGCT
AAAGTTAGTTATATACTCGCCGGTCAGCGTACTGTGCGATTGTCATGTTC
CCATTCGTTTGATTGTTACAGACGATTATGGTATTGGTTATTTAATAATT
TTTTATAATTTCCTGGAAAAACACTTGTTTATAATTCAGTTCTTGAATTT
ATGTTACATTTAACTAACTTAAGAAGACGAAGGTACTAGTTTTCACAAAA
ATATCTGTATTCAGTACCTCTATAAAATGAGATTAGTTAAGGAATGCTTA
TATGGACACGACAGCTAGTAAACGAGTAGTAAAAAAAGCAAACAAACAAA
GAAGACGATGCGTGGGAGGATTGGAATGACCAGTCATCAGTAGTGCTGTG
AAGGTAGCATTGCAACGCTGCACATAAGTGAAGTCAAGCCGTCGAGCGTT
TGAACAAAAAAAATCGTTCTTCAGAATTTGTTTCTCGCATGGTTTCGCAC
TTTGAGGAATCGCGTCAATTTGCCTTCTTTTCAAGGGAGGATAACCTGAA
TTGCAACCCCGATTTTTTTATCGCAGTATACTCTTTGTTGATACCCCACT
GGTAGTAGAAGTATTATGGTCATGCGTTCAGCGTTACGTCCTAGCTGCAT
ATATTCACGATAAGGAGTCATTTTTCAACTGGAAGTTGGCGGGGGGCAAG
ATTTTCACCACTTTTGATGACAAAATGTCTTGATCTTATTGTAGGATCAT
TTCGGAACAGATTGTTCTTGTCCGTTGTTGTTATGAGCGTTGCCGGTTCA
GTTTTACATTTCATTCATATGCATTTTGCTTACTCTTATGCATTAGGAAT
TGTGCAATGTTGATGGCAACAGTCCGGTTCGCACTCAAACTACCTAGACG
TCTAACTCGAAAGTAGAAATTGCCATCGTATGCACCCCTCCCCCCCTTCG
ATTGAAACGGCTCGATATCATAGGTACTGGTATCACTGGGGGTATCACTG
GGTATCGACATGCGGGGTTTTAGAGAATAATATTTGATATTTTACCTAGG
TCTATGGATTACTAAATTCCTTGAGTGGTACCATCCAACGTGCGGCTGAT
GAGAGTATAAGTGGGTCCCGGCAGAGTTTTTTTTTTTTCGTACGTCTGCT
GGCTTCTCTCACCTATAAATTTGCTGGTATTGTGTTGCATGTTCTCGGGC
GCGCAGTCAGGGGTGGACAAGGACTGGCCGCTGTTCGTCCGCGGTCACGA
CGGCAAGGACAATGAGATCTTTATTCAGGTCGGTGTGAAATGATGCCTGT
GCGGGCATCGTGCGTCTAGACATGTACTCTGCCTAAATACAGCTTGACGG
TTGCGACAGCCAGCGGCCTTCGATTAGGGTAGAGAGTGGGAGATACAGTT
TGGGAGTAGGCGTGAAGGTGGCACGGCATGGGGGTTCTTTTCTGTCGGTC
GTCTGTGTGCGTTTCAAAAGGAGTATGCATTTTAGGATACACTGCCGCTG
TGTATTAAATCGTCAGCGTATTCTATAGCGTTTGGGTTGTGATTTATGTA
AGCATGTATGCTATGCTCTCGCTGATGGTGTCGGAAAATGTTTCACAGTA
TGCTTGTGGCGGGTAGGTATGTTGTATTTATTTTATTACTGTATATGTAC
ATGTTTCAACCGTCATTTTTAGGGCTGTTCATGGTTTATTCAGATTACCG
TTGTTTCCGTCGTCGGCGAAGTCAATCGGTACACTATTGCATTACCAACA
TTATATCGGTAAGGTATTGCTTCGAGTGAAGAGCGTCCGTGGCGCGAAGC
TTCGGGCGAGTGATTTACCGTGAGTCAAATGCCCCCCCGCCCGCTGATGA
GGCGACCTCGTCGGGGACACCGCCTGAGGCAAAAATAAAAAGTCTTTTCG
ACTTTCGTCTCTTGATCAAAATTGAGCTAAACTTTCCTTTTTATAATGTT
TGACCACCAATCGAGATAAACATTATATATATACATTGTATTATTAGTCA
ATATCCGACATGTTATGTATGTATCTGCGCCCCCCCTTAACGCAGCGCTA
CGGTAGTGAGGCTCTTCTTTGTTATTGAGGTTATACCCCCCCCCCCCGGA
TCGGAAATCGCTTTGACAGCAAGAGATCTCCGTCCTCTCGAGGATGTGAG
TTGAACGGTTAAACAATTATATGCAAAGCATGAATGTCTCCCCCCCCGCG
CTCTTTCCCCATGCCATCCCTATTCGGTTGGACCTAATCATTTACCGCTG
CCTTTTGTGCCTATTTTCGTTCAGCCGGGAGAAATTATCTTCTACGAGAG
TGCAAGCGTGTTGCATGGGCGACCAACGCCGTTCAAGGGCGATGCATTCG
CCAATATTTTCGTGCATTTTGCGCCCACAAAAGAGTGGGACATCTCCTCG
CAAGATGTGTCTAGGGCTGAAGCCGAGGAAAGGAAAATGCAGCGGTTAGC
ACGGCGAGCAGAGGAGGAAGCAGCTCGTACCGATGAACTTTGATTTTTTT
TTCTCCTTGTATAGTCATTATCCGTGCAACCCGTGTTGAGGTCGTGTTTC
CTCGTGTCTGGTTAGTTGAAATTGCTAGCTCCATAAATGATTATTGAAGT
ATTCCTTGTACCTGCATAGTCAAAATTTATGGCTAGCGCAAAACGGCTCG
CTGCGCTCGCGTGTAGGCACCCATGTCAATGAAGATTCGGGTTTTAGAAG
TGACGTGATTACAGTGATGAGAACATGTGTCAGTACAATGACGATCACAA
TAGCCTATATAGATATTTATATACATCGAATATATATTCCACGTTTGTGC
GCTTGTATTGGATTCCGGTTCCGTTCGTCTTGTTTTACTCTTGCTTTCAT
CTGTCTGTTGACATTGTTTTGTTGGGGCTCTGTTCGGGTGTTCATGCATT
GAACGTCCCTTTTTGTTTTAGTGTATTTCGTATTTTGTTCGCGACATGAG
TAGCGTGTCGTATTATTTGATTTGTAACCTCTTGAACAGTGGTGGATTAA
GCGGGTATAGCACAGTACAATGTCTTCCCGCAGGATGGCCTGTAGAAGCA
GGTGCTGCTCAGGATTCGGCAGACAGGCCGTTTGCTACTGCTCTCGATCT
CTATCCAGCAGCCGAGTATCGTTCAGAGTGTCTACAATATAAAAACAGTG
CAGGAGTACCGCACGTTGAAATCGTCAATTTCTAGTGGATCGTGTCCGTC
GAGGTTTTGAAACCTCCTAACTATTTGCAGCGCGGAACATGGAACATGGT
GGTGAAATGGATAATGAAGCTT
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig7304:306..10827+

>mRNA_H-paniculata_contig7304.15276.1 ID=mRNA_H-paniculata_contig7304.15276.1|Name=mRNA_H-paniculata_contig7304.15276.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1830bp|location=Sequence derived from alignment at H-paniculata_contig7304:306..10827+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTGTGTGGGTTGACTCGGGCAACGGTCTCTCTCGGTTTATGTTGCGT
GGTGGCCACGCCAGGTGTGACTGCTGGTGCGGAGCAGGAGTGGCATATAC
CAGAAGATGAGATGGTGTGTGGGTTGACTCGGGCAACGGTCTCTCTCGGT
TTATGTTGCGTGGTGGCCACGCCAGGTGTGACTGCTGGTGCGGAGCAGGA
GTGGCATATACCAGAAGATGAGACGCTCGTATGCAACGTAGGCTCTGCCT
GTCTGGAAGAGTACCGGAGCGCAAATGGCAGTCATGACAAGGTGTGGCCT
GAAGCCGATGGGAAGCTGCGGCAAAGTCGTATCAGAGCCGAGTATTCCAG
ACTGAGACTCAACAAGTACCAACCAGTGATCGTGCCCACCTTCACTGAGA
CGCTCGTATGCAACGTAGGCTCTGCCTGTCTGGAAGAGTACCGGAGCGCA
AATGGCAGTCATGACAAGGTGTGGCCTGAAGCCGATGGGAAGCTGCGGCA
AAGTCGTATCAGAGCCGAGTATTCCAGACTGAGACTCAACAAGTACCAAC
CAGTGATCGTGCCCACCTTCACTGAGGTGGGGTACAAGAAGGAAAAACTC
AACCCTGAGACCTACGCTGCCGTGATGGAGTGGTACGTGAAGGAGGCAGA
TAATCAAGTAGTGGAAAGCTGGCCGCAGGACAACACGTACTTCAACCATT
GGAAAGTCGATTCTGTCATGACCACTGCGCCGAGTTCCGTCAGAAAGGTG
GGGTACAAGAAGGAAAAACTCAACCCTGAGACCTACGCTGCCGTGATGGA
GTGGTACGTGAAGGAGGCAGATAATCAAGTAGTGGAAAGCTGGCCGCAGG
ACAACACGTACTTCAACCATTGGAAAGTCGATTCTGTCATGACCACTGCG
CCGAGTTCCGTCAGAAAGCGTCTGTACCGCGATTTATTGCCCCTCATGGA
GCAGTGGACAGGGTTATCTCTCAACCCTACGGCGTGCTATGGCGTGCGTA
CCTACCCGCGCGATAGCGTGTTGGCCAATCACGTTGACCGCGTCGACACG
CACGTTATCTCTGCGATCATCAACCTCGCGCAACGTCTGTACCGCGATTT
ATTGCCCCTCATGGAGCAGTGGACAGGGTTATCTCTCAACCCTACGGCGT
GCTATGGCGTGCGTACCTACCCGCGCGATAGCGTGTTGGCCAATCACGTT
GACCGCGTCGACACGCACGTTATCTCTGCGATCATCAACCTCGCGCAATC
AGGGGTGGACAAGGACTGGCCGCTGTTCGTCCGCGGTCACGACGGCAAGG
ACAATGAGATCTTTATTCAGTCAGGGGTGGACAAGGACTGGCCGCTGTTC
GTCCGCGGTCACGACGGCAAGGACAATGAGATCTTTATTCAGCCGGGAGA
AATTATCTTCTACGAGAGTGCAAGCGTGTTGCATGGGCGACCAACGCCGT
TCAAGGGCGATGCATTCGCCAATATTTTCGTGCATTTTGCGCCCACAAAA
GAGTGGGACATCTCCTCGCAAGATGTGTCTAGGGCTGAAGCCGAGGAAAG
GAAAATGCAGCGGTTAGCACGGCGAGCAGAGGAGGAAGCAGCTCGTACCG
ATGAACTTTGACCGGGAGAAATTATCTTCTACGAGAGTGCAAGCGTGTTG
CATGGGCGACCAACGCCGTTCAAGGGCGATGCATTCGCCAATATTTTCGT
GCATTTTGCGCCCACAAAAGAGTGGGACATCTCCTCGCAAGATGTGTCTA
GGGCTGAAGCCGAGGAAAGGAAAATGCAGCGGTTAGCACGGCGAGCAGAG
GAGGAAGCAGCTCGTACCGATGAACTTTGA
back to top