mRNA_H-paniculata_contig73.15268.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig73.15268.1 vs. uniprot
Match: D7FRA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRA0_ECTSI) HSP 1 Score: 831 bits (2146), Expect = 1.690e-283 Identity = 513/872 (58.83%), Postives = 595/872 (68.23%), Query Frame = 3
Query: 357 MGSAQP-DVKPDGLMSELAIFAASGSTSSAGGGEVEGAG--DEDLGPMGWSPVPLVRTTSTXXXXXXXXXXXXNWLTSLVEKSKAAGXXXXXXKGPKGGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTPRSDVQCLHRWNKVLRPGLHKGPWTEEEDSIVRECVELSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGASELTADLLNKLKEAYEQMQAQPSASSGQGLSDESGTDTDTKESSVRAGPLAQHRRRDSTPTSFGDLAMLHTCNDRLPSQSQSMHTRRHSSAGALTGMLSGSPPPDQRHHRHVREEDLDAVRAARAQVMQAGQTLFLGDTDPPNVHGSHLVRGQARISGTHGTAAERGHQDADGH-STLAAVDELNVVKAETVDQAQASKDAEDEQARVRSRLQSAHAGSQHNTADSGTG-RGRSHMTQRMPPPQHPLPRASGHPPRPFVGSNNRGGAVSTGSTSGEGGMGALLGVASQLRPPRIDTNALVKRESSGGNASLSQLLLTSPFSSNESTRFASS-DNLGQPTSHGLEMESSATPIGQAFTSDAPAESPVSQAVRETRRQGTRMQEGEQVPLSVLPYFRFLSEEAQRNVMSQLIDNFQTASITKRGSGSNAPAPTSSASVTSPEGLAFMRSPTFAKSLP--GSTAASSXXXXXXXXXAYQAMESMMVDHHRDNVDGSRGISSGVASAVXXXXXXXATATTVQAGGQGISSVPMHRVLSAPLLSPAGGSSDGTRPRRERMSGSGGLDTHLHRLPSFRQVSEQAPSQG-SSGAFDRVSESNGGIGMKSRTSMDLSG 2945
MG AQP D DGL++E +F A+G S G++ G DEDL M WS LVR+TS WLTSLVEKSKAAG KGPKGGKWTKEEDTRLREIVEHHGARNWRMVAEQLGT RSDVQCLHRWNKVLRPGLHKGPWTEEEDSIVRECVE SGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGAS+LT DLLNKLKEAYEQMQ QP AS QG+SDESGTD DTKE S RA DSTP++FGD +LH ++L S Q MH RRHS+AGALTGMLS SP ++R R + +ED++A R+A+AQ VR +A A+ER ++++ H S+LA V+EL VK E ++Q +K+ ++Q +H + H +A++ G RG+SHM RM PPQHP R GHPPRPF G + GA G+ G+GGMGALLGVASQLRPPRIDTN+ VKRES GG ASLSQLLLTSPF SN+ RFA++ D +GQP +H EME+S P G++++S A AESPVSQAVRETRRQGTRMQEGEQVPLSVLPYFRFLSEEAQRNVMSQLIDNFQT SI KRG S + A +++S +SP GLAFMRSP FAK L GS A++ A++ +++MMVDHHR G+ IS+ VA+ V+A S M+RVL AP +S A S R LP RQ PS G +SG F RV+ S+ G K+ +S+DL+G
Sbjct: 1 MGGAQPTDENDDGLIAEANLFDAAGGGSE---GDLVGVAPADEDLA-MAWSGSRLVRSTSMSSTGSADAEESEEWLTSLVEKSKAAGAKGARSKGPKGGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTLRSDVQCLHRWNKVLRPGLHKGPWTEEEDSIVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGASQLTPDLLNKLKEAYEQMQVQP-ASGSQGMSDESGTDNDTKEPSTRAAAXXXXXXHDSTPSAFGDDDLLHPGGEQLTSPPQPMHARRHSAAGALTGMLSDSPESERRFRRRMGQEDVEA-RSAQAQG---------------------AVRARAG-------ASERAGRESEKHTSSLAVVNELQTVKTEELEQPATTKERSEKQ-------DHSHLLAPHGSAEAPAGGRGQSHMLHRMSPPQHPHSRLPGHPPRPFAGPSRSTGAGPGGAGVGDGGMGALLGVASQLRPPRIDTNSTVKRESGGGPASLSQLLLTSPFGSNDGARFAATNDAIGQPNTHTAEMETSTAPAGESYSS-ATAESPVSQAVRETRRQGTRMQEGEQVPLSVLPYFRFLSEEAQRNVMSQLIDNFQTTSIGKRGVASTSSASAATSSASSPGGLAFMRSP-FAKGLAPVGSGGATASAGNGSSSPAFE-VDAMMVDHHRVGGTGA-SISAAVAA--------------VEAHAS--SDHDMNRVLPAPGVSTAANSEAAMEQSR---------------LPPLRQD----PSDGRNSGGFGRVNGSSMG---KNGSSLDLAG 789
BLAST of mRNA_H-paniculata_contig73.15268.1 vs. uniprot
Match: A0A7S2BQG7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQG7_9STRA) HSP 1 Score: 277 bits (708), Expect = 1.190e-82 Identity = 127/161 (78.88%), Postives = 139/161 (86.34%), Query Frame = 3
Query: 630 GPKGGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTPRSDVQCLHRWNKVLRPGLHKGPWTEEEDSIVRECVELSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWL 1112
GP GGKWTKEED LR IVE HGA+NWR VAE LG R+DVQCLHRWNKVLRPGLHKGPWTEEED IVR+ V + GA KVKWS +A++L GRIGKQCRERWFNHLDP+I KGEW+PEEDRIVF AQ GNRW +IAKLLPGRTEN+VKNR+NSSARKKWL
Sbjct: 4 GP-GGKWTKEEDASLRVIVEQHGAKNWRKVAELLGDTRTDVQCLHRWNKVLRPGLHKGPWTEEEDGIVRDMVLMYGAGKVKWSAIAAKLHGRIGKQCRERWFNHLDPNINKGEWTPEEDRIVFEAQNQFGNRWSDIAKLLPGRTENSVKNRWNSSARKKWL 163
BLAST of mRNA_H-paniculata_contig73.15268.1 vs. uniprot
Match: A0A835YLN0_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLN0_9STRA) HSP 1 Score: 270 bits (689), Expect = 4.010e-78 Identity = 121/191 (63.35%), Postives = 148/191 (77.49%), Query Frame = 3
Query: 648 WTKEEDTRLREIVEHHGARNWRMVAEQLGT-------PRSDVQCLHRWNKVLRPGLHKGPWTEEEDSIVRECVELSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGASE-LTADLLNKLKEAYEQMQAQ 1196
WT EED RLR +V+ HG+RNW++VA++L PR+DVQCL+RW K LRPGLHKG WTE ED +VRE VE G KVKWS +A+RLPGRIGKQCRERWFNHLDP++K+ W+PEED ++F AQA +GNRWCEIAKLLPGRTENAVKNRFNSSA+KKW+ +N E +T LL+ ++ YE QA+
Sbjct: 36 WTSEEDARLRAVVDKHGSRNWKLVADELAQAQPHAQPPRTDVQCLNRWKKTLRPGLHKGAWTEAEDRVVRESVEECGIAKVKWSTIAARLPGRIGKQCRERWFNHLDPALKRSTWTPEEDTVIFEAQARLGNRWCEIAKLLPGRTENAVKNRFNSSAQKKWVSKNGAATGEGITQQLLDAVQRVYEAEQAE 226
BLAST of mRNA_H-paniculata_contig73.15268.1 vs. uniprot
Match: A0A7S2R561_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R561_9STRA) HSP 1 Score: 280 bits (717), Expect = 1.470e-77 Identity = 123/163 (75.46%), Postives = 141/163 (86.50%), Query Frame = 3
Query: 633 PKGGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTPRSDVQCLHRWNKVLRPGLHKGPWTEEEDSIVRECVELSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQN 1121
P GGKW++EED +LR IVE HGA+NW+ VAE LG RSDVQCLHRWNKVLRPGLHKGPWTE+ED IV + V G +KWSV+A+ LPGRIGKQCRERWFNHLDPSIKKGEW+PEED+++F AQ +GNRWCEIAKLLPGRTENAVKNR+NSSARK+WL +N
Sbjct: 144 PIGGKWSREEDDKLRAIVEQHGAKNWKKVAELLGPVRSDVQCLHRWNKVLRPGLHKGPWTEDEDRIVSDMVLAHGVGNIKWSVIAAELPGRIGKQCRERWFNHLDPSIKKGEWTPEEDKVLFEAQLVVGNRWCEIAKLLPGRTENAVKNRWNSSARKRWLQEN 306
BLAST of mRNA_H-paniculata_contig73.15268.1 vs. uniprot
Match: A0A836C844_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C844_9STRA) HSP 1 Score: 259 bits (662), Expect = 1.920e-76 Identity = 113/155 (72.90%), Postives = 130/155 (83.87%), Query Frame = 3
Query: 642 GKWTKEEDTRLREIVEHHGARNWRMVAEQLGTPRSDVQCLHRWNKVLRPGLHKGPWTEEEDSIVRECVELSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKK 1106
G W +ED RLR+ V+ HG R+WR +AE +G R+D+QCLHRWNKVLRPGLHKGPWTE ED +VRE VE G KVKWS VA++LPGRIGKQCRERWFNHLDP+IK+ W+PEED +VF AQ +GNRWCEIAKLLPGRTENAVKNRFNSSA+KK
Sbjct: 2 GTWAPDEDARLRDAVDRHGPRSWRAIAEDVGGARTDMQCLHRWNKVLRPGLHKGPWTETEDRVVRESVEAVGIAKVKWSAVAAKLPGRIGKQCRERWFNHLDPAIKRSPWTPEEDTVVFEAQLRLGNRWCEIAKLLPGRTENAVKNRFNSSAQKK 156
BLAST of mRNA_H-paniculata_contig73.15268.1 vs. uniprot
Match: F0Y9B4_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9B4_AURAN) HSP 1 Score: 251 bits (641), Expect = 1.330e-73 Identity = 113/154 (73.38%), Postives = 129/154 (83.77%), Query Frame = 3
Query: 645 KWTKEEDTRLREIVEHHGARNWRMVAEQLGTPRSDVQCLHRWNKVLRPGLHKGPWTEEEDSIVRECVELSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKK 1106
KWT+EED RLREIVE GA+NW+ +A LG RSDVQCLHRWNKVLRPGL KGPWT +ED IV++ V GA +KWSV+A++LPGRIGKQCRERWFNHLDP IKKG+W+PEED I+F Q GNRW EIAKLLPGRTENAVKNR+NSSARK+
Sbjct: 1 KWTEEEDNRLREIVETFGAKNWKRLAMLLGNVRSDVQCLHRWNKVLRPGLSKGPWTADEDKIVKDMVLRHGAGNIKWSVIAAQLPGRIGKQCRERWFNHLDPEIKKGDWTPEEDNILFETQRVHGNRWSEIAKLLPGRTENAVKNRWNSSARKR 154
BLAST of mRNA_H-paniculata_contig73.15268.1 vs. uniprot
Match: A0A7S1GEG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GEG8_9STRA) HSP 1 Score: 249 bits (637), Expect = 2.700e-72 Identity = 114/182 (62.64%), Postives = 139/182 (76.37%), Query Frame = 3
Query: 639 GGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTPRSDVQCLHRWNKVLRPGLHKGPWTEEEDSIVRECVELSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGASELTAD---LLNKLKEA 1175
GG WT ED LR VE HG RNW+ +AE LG R+DVQCLHRWNKVL+PGL KGPW +EED +VR+ V G +V+WSV+AS+LPGRIGKQCRERWFNHLDP+IKKG W EED ++F AQ +GN+WCEIA++LPGRTENAVKNR+NSSAR++W + G E A L+ ++KEA
Sbjct: 11 GGNWTAAEDAELRVAVEAHGGRNWKRIAETLGHGRTDVQCLHRWNKVLKPGLVKGPWLKEEDDVVRDMVMKYGVGQVRWSVIASKLPGRIGKQCRERWFNHLDPAIKKGGWMEEEDLLIFQAQREVGNKWCEIARMLPGRTENAVKNRWNSSARRRWFKET-GSKMEQDARVPMLVEEIKEA 191
BLAST of mRNA_H-paniculata_contig73.15268.1 vs. uniprot
Match: A0A8J2X3E5_9STRA (Hypothetical protein n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X3E5_9STRA) HSP 1 Score: 262 bits (670), Expect = 3.630e-72 Identity = 117/162 (72.22%), Postives = 135/162 (83.33%), Query Frame = 3
Query: 627 KGPKGGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTPRSDVQCLHRWNKVLRPGLHKGPWTEEEDSIVRECVELSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWL 1112
+ P GGKWT+EED RLREIVE GA+NW+ +A LGT RSDVQCLHRWNKVLRPGL KGPWT ED +VR+ V GA +KWSV+A++LPGRIGKQCRERWFNHLDP IKKG+W+P+ED ++F Q GNRW EIAKLLPGRTENAVKNR+NSSARK+WL
Sbjct: 91 RAPVGGKWTEEEDRRLREIVETFGAKNWKRLAMLLGTVRSDVQCLHRWNKVLRPGLSKGPWTAAEDRVVRDMVLRHGAGNIKWSVIAAQLPGRIGKQCRERWFNHLDPDIKKGDWTPDEDAVLFETQRVHGNRWSEIAKLLPGRTENAVKNRWNSSARKRWL 252
BLAST of mRNA_H-paniculata_contig73.15268.1 vs. uniprot
Match: A0A6U4HUA2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4HUA2_9STRA) HSP 1 Score: 259 bits (662), Expect = 2.620e-70 Identity = 150/337 (44.51%), Postives = 182/337 (54.01%), Query Frame = 3
Query: 627 KGPKGGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTPRSDVQCLHRWNKVLRPGLHKGPWTEEEDSIVRECVELSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGASELTADLLNKLKEAYEQMQAQPSAS--SGQGLSDESGTDTDTKESS-VRAGPLAQHRRRDSTPTSFGDLAMLHTCNDRLPSQSQSMHT-----RRHSSAGALT----------GMLSGSPPPDQRHHRHVREEDLDAVRAARAQVM---------QAGQTLFLGDTDP 1556
K +GGKW+KEED RL+ IV+ HGA+NW+ +AE LG RSDVQCLHRWNKVL+PGLHKGPW ED +VR+ V G KVKWS +A+ LPGRIGKQCRERWFNHLDPSI K W+ EED I+F AQ GNRWCEIAKLLPGRTEN VKNR+NSSARKKW L L + + +A+ + + + G+ D K+S R P T TS LP Q MH +RH S +L G SP R + E++L+ R A V+ QA T F+ P
Sbjct: 237 KPSQGGKWSKEEDARLKGIVQEHGAKNWKKIAELLGHTRSDVQCLHRWNKVLKPGLHKGPWQAAEDEVVRDMVIRHGVGKVKWSDIAALLPGRIGKQCRERWFNHLDPSISKAPWTEEEDTIIFEAQQIFGNRWCEIAKLLPGRTENMVKNRWNSSARKKWFADRKAEGGNLAKMLATRSDANLTGLPPDLAAAVKAARQTATNGGSQGDQKKSGETRIKPDVVEDGNSPTETSRSLPGSETAAAAALPLQQPGMHAGRSPLQRHESLSSLPKYLVPPPISIGTTEASPSLAPLSTRSITEDELEVFRQAIDTVLSPMDYQQGGQASSTPFVSPDTP 573
BLAST of mRNA_H-paniculata_contig73.15268.1 vs. uniprot
Match: A0A7S3HPT5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HPT5_9STRA) HSP 1 Score: 248 bits (633), Expect = 1.410e-68 Identity = 108/160 (67.50%), Postives = 131/160 (81.88%), Query Frame = 3
Query: 639 GGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTPRSDVQCLHRWNKVLRPGLHKGPWTEEEDSIVRECVELSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQ 1118
GGKW+ EEDT L+EIV+ HGA++W+ VA LG R+DVQCLHRWNKVLRPGL KG W++EED IVR V G KV+WS +A +LPGRIGKQCRERWFNHLDP+IKKG+W+ +E+ I++ AQ + GNRWCEI+KLLPGRTENAVKNR+NS KKWL +
Sbjct: 72 GGKWSTEEDTLLKEIVQVHGAKSWKKVAGLLGKTRTDVQCLHRWNKVLRPGLQKGAWSKEEDQIVRNMVAQVGVVKVRWSTIAEQLPGRIGKQCRERWFNHLDPTIKKGDWTRDEEIIIYEAQRHFGNRWCEISKLLPGRTENAVKNRWNSCTMKKWLKE 231 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig73.15268.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig73.15268.1 >prot_H-paniculata_contig73.15268.1 ID=prot_H-paniculata_contig73.15268.1|Name=mRNA_H-paniculata_contig73.15268.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1058bp MQDGSVAAGSASLPSPRNPPEKRSASQGTMVPAQNRALSERTPRSANTQGback to top mRNA from alignment at H-paniculata_contig73:19096..37473+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig73.15268.1 ID=mRNA_H-paniculata_contig73.15268.1|Name=mRNA_H-paniculata_contig73.15268.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=18378bp|location=Sequence derived from alignment at H-paniculata_contig73:19096..37473+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig73:19096..37473+ >mRNA_H-paniculata_contig73.15268.1 ID=mRNA_H-paniculata_contig73.15268.1|Name=mRNA_H-paniculata_contig73.15268.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=6348bp|location=Sequence derived from alignment at H-paniculata_contig73:19096..37473+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |