mRNA_H-paniculata_contig7291.15262.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7291.15262.1 vs. uniprot
Match: D8LL91_ECTSI (NAD(P)H-hydrate epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL91_ECTSI) HSP 1 Score: 426 bits (1095), Expect = 7.220e-147 Identity = 204/240 (85.00%), Postives = 221/240 (92.08%), Query Frame = 1
Query: 73 PAAASISLLNAADSAALDADLMATPGFSIDQLMELAGLSVACAVAKVYPPSSRILIICGPGNNGAGDGLVAARHLWQFGYRPTCLYPKPTNKQLFINLVEQCKQLDIEFLPSWPGLQGLESYDVVLDAMFGFGFKGDPRPPFDTILADLAH-GSTPIVSVDVPSGWSVDEGDARGNGIKPEMLISLTAPKLSARFFEGPHHFLGGRFVPPGIAEKYSLKLPAYPGSEQCVNLEQWGQQRK 789
P+++ ISLL A DSAALDADLM+TPGFSIDQLMELAGLSVACA+AKVYPP SR+LI+CGPGNNG GDGLVAARHLWQFGYRPTCLYPKPT +QLF NLVEQCKQLDIEFLPSW L SYDVVLDAMFGFGFKGDPRPPFDTIL DL+ G+TP+VSVDVPSGWSVDEGD++G G+KPEMLISLTAPKLSARFFEGPHHFLGGRFVPPGIA KYSL+LPAYPGSEQCV LE+WGQQR+
Sbjct: 8 PSSSGISLLTAEDSAALDADLMSTPGFSIDQLMELAGLSVACAIAKVYPPPSRVLIVCGPGNNG-GDGLVAARHLWQFGYRPTCLYPKPTARQLFTNLVEQCKQLDIEFLPSWEAAGDLGSYDVVLDAMFGFGFKGDPRPPFDTILKDLSKSGATPVVSVDVPSGWSVDEGDSKGGGLKPEMLISLTAPKLSARFFEGPHHFLGGRFVPPGIASKYSLELPAYPGSEQCVRLEEWGQQRR 246
BLAST of mRNA_H-paniculata_contig7291.15262.1 vs. uniprot
Match: A0A6H5KSM4_9PHAE (NAD(P)H-hydrate epimerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM4_9PHAE) HSP 1 Score: 329 bits (844), Expect = 4.900e-108 Identity = 163/209 (77.99%), Postives = 181/209 (86.60%), Query Frame = 1
Query: 28 GFAMAATGHLSPGSSPAAASISLLNAADSAALDADLMATPGFSIDQLMELAGLSVACAVAKVYPPSSRILIICGPGNNGAGDGLVAARHLWQFGYRPTCLYPKPTNKQLFINLVEQCKQLDIEFLPSWPGLQGLESYDVVLDAMFGFGFKGDPRPPFDTILADLAH-GSTPIVSVDVPSGWSVDEGDARGNGIKPEMLISLTAPKLSAR 651
G A A + S P++ ISLL A DSAALDADLM+TPGFSIDQLMELAGLSVACA+AKVYPPSSR+LI+CGPGNNG GDGLVAARHLW FGY+PTCLYPKPT +QLF NLVEQCKQLDIEFLPSW L +DVVLDAMFGFGFKGDPRPPFDTIL DL+ G+TP+VSVDVPSGWSVDEGD++G+G+KPEML+SLTAPKLSAR
Sbjct: 40 GLATATSSMASSQPPPSSFGISLLTAEDSAALDADLMSTPGFSIDQLMELAGLSVACAIAKVYPPSSRVLIVCGPGNNG-GDGLVAARHLWHFGYKPTCLYPKPTARQLFTNLVEQCKQLDIEFLPSWEAAGDLGDFDVVLDAMFGFGFKGDPRPPFDTILKDLSKSGATPVVSVDVPSGWSVDEGDSKGDGLKPEMLVSLTAPKLSAR 247
BLAST of mRNA_H-paniculata_contig7291.15262.1 vs. uniprot
Match: A0A7S0WQ09_9CHLO (NAD(P)H-hydrate epimerase n=2 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WQ09_9CHLO) HSP 1 Score: 288 bits (736), Expect = 2.690e-91 Identity = 147/233 (63.09%), Postives = 176/233 (75.54%), Query Frame = 1
Query: 88 ISLLNAADSAALDADLMATPGFSIDQLMELAGLSVACAVAKVYPPSS--RILIICGPGNNGAGDGLVAARHLWQFGYRPTCLYPKPTNKQLFINLVEQCKQLDIEFLPSWPGL-QGLESYDVVLDAMFGFGFKGDPRPPFDTILADLAHGSTP--IVSVDVPSGWSVDEGDARGNGIKPEMLISLTAPKLSARFFEGPHHFLGGRFVPPGIAEKYSLKLPAYPGSEQCVNLEQ 771
I+ L ++ A+D +LM GFS+DQLMELAGLSVAC++A+VYP +S ++LII GPGNNG GDGLVAARHL FGY PT YPKPT+K L+ LV QCK L I F+ + L Q + ++DVVLDAMFGF FKGDPRPPF IL L + P IVSVD+PSGW V++GD G G++P+ML+SLTAPK AR FEGPHHFLGGRFVPP IA KYSLKLPAYPG+ CV + Q
Sbjct: 102 ITYLKQDEAVAVDEELMGPLGFSVDQLMELAGLSVACSLAEVYPSTSHPKVLIIAGPGNNG-GDGLVAARHLHHFGYTPTICYPKPTDKVLYNGLVTQCKSLRIPFITAEELLAQPIGAFDVVLDAMFGFSFKGDPRPPFAAILNALKPPANPPPIVSVDIPSGWQVEQGDVDGGGLRPDMLVSLTAPKECARTFEGPHHFLGGRFVPPEIATKYSLKLPAYPGTAMCVRIPQ 333
BLAST of mRNA_H-paniculata_contig7291.15262.1 vs. uniprot
Match: A0A7S2S1N8_9STRA (NAD(P)H-hydrate epimerase n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S1N8_9STRA) HSP 1 Score: 272 bits (696), Expect = 1.120e-86 Identity = 133/223 (59.64%), Postives = 165/223 (73.99%), Query Frame = 1
Query: 121 LDADLMATPGFSIDQLMELAGLSVACAVAKVYPPSSRILIICGPGNNGAGDGLVAARHLWQFGYRPTCLYPKPTNKQ----LFINLVEQCKQLDIEFLPSWPGLQGLESYDVVLDAMFGFGFKGDP--RPPFDTILADLAHGSTPIVSVDVPSGWSVDEGDARGNGIKPEMLISLTAPKLSARFFEGPHHFLGGRFVPPGIAEKYSLK-LPAYPGSEQCVNLE 768
LDA+LM TPGFSIDQLMELAGLSVACAVA V+P +S++L +CGPGNNG GD LV+ARHL+ FGY+P LYPK + L+ NL++QCK LDI + S P YDVVLD +FGF F G R P+D ++ L + PI S+DVPSGW V++GDA G+GIKP ML+SLTAPKL A F+G HH+LGGRF+PP +A KY+L+ LP YPG++QCV LE
Sbjct: 13 LDAELMQTPGFSIDQLMELAGLSVACAVAAVWPVASKVLTVCGPGNNG-GDALVSARHLYHFGYKPVVLYPKAPKESGNGILYRNLLQQCKDLDIPVIDSVPESISQHEYDVVLDGVFGFSFNGSNGVRAPYDKVMQVLKETNVPIASIDVPSGWDVEQGDAHGDGIKPSMLVSLTAPKLCASTFKGEHHYLGGRFLPPKLAVKYNLQGLPEYPGTDQCVRLE 234
BLAST of mRNA_H-paniculata_contig7291.15262.1 vs. uniprot
Match: A0A453P5A4_AEGTS (NAD(P)H-hydrate epimerase n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453P5A4_AEGTS) HSP 1 Score: 272 bits (696), Expect = 6.020e-86 Identity = 143/241 (59.34%), Postives = 170/241 (70.54%), Query Frame = 1
Query: 76 AAASISLLNAADSAALDADLMATPGFSIDQLMELAGLSVACAVAKVYPPS--SRILIICGPGNNGAGDGLVAARHLWQFGYRPTCLYPKPTNKQLFINLVEQCKQLDIEFLPSWPGLQGLES-YDVVLDAMFGFGFKGDPRPPFDTILADLAHGST--------PIVSVDVPSGWSVDEGDARGNGIKPEMLISLTAPKLSARFFEGPHHFLGGRFVPPGIAEKYSLKLPAYPGSEQCVNL 765
AAA ++ L+ D+A +D LM GFS+DQLMELAGLSVA AVA+VY S +R+LIICGPGNNG GDGLVAARHL+ FGY+P YPK T K L+ LV Q + L I F+P Q L YD+V+DAMFGF F G PRPPFD ++ L S PIVSVD+PSGW V+EGD G GIKP+ML+SLTAPKL A+ F GPHHFLGGRFVPP I+ KY L+LP YPG+ CV +
Sbjct: 15 AAAEVTHLSQRDAADIDEQLMGPLGFSVDQLMELAGLSVATAVAEVYKLSEHTRVLIICGPGNNG-GDGLVAARHLYHFGYKPFVCYPKRTAKPLYSGLVTQLESLAIPFVPVEDLPQDLSGQYDIVIDAMFGFSFHGTPRPPFDDLIQMLVSLSVVGDSAKRPPIVSVDIPSGWHVEEGDVSGGGIKPDMLVSLTAPKLCAKKFTGPHHFLGGRFVPPPISSKYGLELPPYPGTSMCVRI 254
BLAST of mRNA_H-paniculata_contig7291.15262.1 vs. uniprot
Match: A0A507C3Q7_9FUNG (NAD(P)H-hydrate epimerase n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C3Q7_9FUNG) HSP 1 Score: 270 bits (690), Expect = 7.340e-86 Identity = 137/231 (59.31%), Postives = 167/231 (72.29%), Query Frame = 1
Query: 85 SISLLNAADSAALDADLMATP--GFSIDQLMELAGLSVACAVAKVYPPSS--RILIICGPGNNGAGDGLVAARHLWQFGYRPTCLYPKPTNKQLFINLVEQCKQLDIEFLPSWPGLQGLESYDVVLDAMFGFGFKGDPRPPFDTILADLAHGSTPIVSVDVPSGWSVDEGDARGNGIKPEMLISLTAPKLSARFFEGPHHFLGGRFVPPGIAEKYSLKLPAYPGSEQCVNL 765
SI +L+A ++ ALD DLM GFS+DQLME+AGLS ACA+ +VY ++ R+L+I GPGNNG GD LVAARHL+ FGY+PT LYPKPT K ++I LV+QCK LDI F+ S G +E+ DVVLD +FGF F GD RPPFD I+ L S PIVS+D+PSGW V++G+ G+ PEMLISLTAPK A F G HH+LG R VPP I +KY L LP YPG EQCV L
Sbjct: 2 SIKMLSAPEALALDQDLMNKDIGGFSLDQLMEIAGLSCACALTQVYDRATFPRVLVIAGPGNNG-GDALVAARHLFHFGYKPTILYPKPTQKDIYIGLVKQCKNLDIPFVDSVDG--AIENADVVLDGIFGFSFSGDIRPPFDNIIKTLKKSSIPIVSIDIPSGWDVEKGNVVSKGLDPEMLISLTAPKPCALHFRGKHHYLGLRIVPPFIDKKYGLNLPEYPGIEQCVRL 229
BLAST of mRNA_H-paniculata_contig7291.15262.1 vs. uniprot
Match: A0A813ENK1_POLGL (NAD(P)H-hydrate epimerase n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813ENK1_POLGL) HSP 1 Score: 273 bits (699), Expect = 7.450e-86 Identity = 138/220 (62.73%), Postives = 161/220 (73.18%), Query Frame = 1
Query: 115 AALDADLMATPGFSIDQLMELAGLSVACAVAKVYPP--SSRILIICGPGNNGAGDGLVAARHLWQFGYRPTCLYPKPTNKQLFINLVEQCKQLDIEFLPSWPGLQGL-ESYDVVLDAMFGFGFKGDPRPPFDTILADLAHGSTPIVSVDVPSGWSVDEGDARGNGIKPEMLISLTAPKLSARFFEGPHHFLGGRFVPPGIAEKYSLKLPAYPGSEQCVNL 765
AALD DLM+TPGFSIDQLMELAGLSVA AV + +PP S R L++CGPGNNG GDGLVAARHLW FGY P +YP +QLF NLV QC+QL I L P + + E +DV +DA+FGF FKG PR PFD+IL L S +VSVD+PSGW V+ GD G G++P+ L+SLTAPK A F G HFLGGRFVPPGIAEKY L+LP YPG+ Q V L
Sbjct: 112 AALDEDLMSTPGFSIDQLMELAGLSVASAVLEAFPPKGSRRALLVCGPGNNG-GDGLVAARHLWHFGYTPVVVYPVRPARQLFTNLVVQCEQLGIPVLTGMPTSEEVTEGFDVAVDAIFGFSFKGTPRAPFDSILKTLRASSVKLVSVDIPSGWDVELGDVSGEGLRPDALVSLTAPKPCAADFSG-RHFLGGRFVPPGIAEKYGLRLPPYPGAAQVVEL 329
BLAST of mRNA_H-paniculata_contig7291.15262.1 vs. uniprot
Match: A0A453P590_AEGTS (NAD(P)H-hydrate epimerase n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453P590_AEGTS) HSP 1 Score: 272 bits (696), Expect = 1.530e-85 Identity = 143/241 (59.34%), Postives = 170/241 (70.54%), Query Frame = 1
Query: 76 AAASISLLNAADSAALDADLMATPGFSIDQLMELAGLSVACAVAKVYPPS--SRILIICGPGNNGAGDGLVAARHLWQFGYRPTCLYPKPTNKQLFINLVEQCKQLDIEFLPSWPGLQGLES-YDVVLDAMFGFGFKGDPRPPFDTILADLAHGST--------PIVSVDVPSGWSVDEGDARGNGIKPEMLISLTAPKLSARFFEGPHHFLGGRFVPPGIAEKYSLKLPAYPGSEQCVNL 765
AAA ++ L+ D+A +D LM GFS+DQLMELAGLSVA AVA+VY S +R+LIICGPGNNG GDGLVAARHL+ FGY+P YPK T K L+ LV Q + L I F+P Q L YD+V+DAMFGF F G PRPPFD ++ L S PIVSVD+PSGW V+EGD G GIKP+ML+SLTAPKL A+ F GPHHFLGGRFVPP I+ KY L+LP YPG+ CV +
Sbjct: 2 AAAEVTHLSQRDAADIDEQLMGPLGFSVDQLMELAGLSVATAVAEVYKLSEHTRVLIICGPGNNG-GDGLVAARHLYHFGYKPFVCYPKRTAKPLYSGLVTQLESLAIPFVPVEDLPQDLSGQYDIVIDAMFGFSFHGTPRPPFDDLIQMLVSLSVVGDSAKRPPIVSVDIPSGWHVEEGDVSGGGIKPDMLVSLTAPKLCAKKFTGPHHFLGGRFVPPPISSKYGLELPPYPGTSMCVRI 241
BLAST of mRNA_H-paniculata_contig7291.15262.1 vs. uniprot
Match: A0A061S844_9CHLO (NAD(P)H-hydrate epimerase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S844_9CHLO) HSP 1 Score: 280 bits (716), Expect = 1.740e-85 Identity = 147/270 (54.44%), Postives = 184/270 (68.15%), Query Frame = 1
Query: 61 PGSSPAAASISLLNAADSAALDADLMATPGFSIDQLMELAGLSVACAVAKVYPPSS--RILIICGPGNNGAGDGLVAARHLWQFGYRPTCLYPKPTNKQLFINLVEQCKQLDIEFLPSWPGLQG--LESYDVVLDAMFGFGFKGDPRPPFDTILADLAHGSTP--IVSVDVPSGWSVDEGDARGNGIKPEMLISLTAPKLSARFFEGPHHFLGGRFVPPGIAEKYSLKLPAYPGSEQCVNLEQWGQQRKRSDGERRQDEAEPLGEDPKEL 852
P S+ A IS L ++ +D +LM GFS+DQLMELAGLSVAC++A VYPP+ R+ +ICGPGNNG GDGLVAARHL+ FGY YPKPT+K LF LV QC+ L I F+ + LQG +D+V+DAMFGF FKG PRPPFD ILA L+ ++P + VD+PSGW V++GD G G++P+MLISLTAPK AR F G HH+LGGRFVPP + EKY L+LP +PGS QCV + G +R R+ + G DP EL
Sbjct: 106 PSSTDREAEISYLGQEEAVEVDKELMGPLGFSVDQLMELAGLSVACSIADVYPPAQAPRVAVICGPGNNG-GDGLVAARHLYHFGYTVQVCYPKPTSKPLFDGLVTQCRSLGIGFVTTEELLQGPMAARFDLVVDAMFGFSFKGSPRPPFDAILAALSPAASPPRLACVDIPSGWHVEDGDQTGVGLRPDMLISLTAPKRGARGFSGAHHYLGGRFVPPAVVEKYHLRLPPFPGSAQCVRI--GGSAAQRGTAADRELLEDGAGGDPMEL 372
BLAST of mRNA_H-paniculata_contig7291.15262.1 vs. uniprot
Match: A0A453P5D3_AEGTS (NAD(P)H-hydrate epimerase n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453P5D3_AEGTS) HSP 1 Score: 272 bits (696), Expect = 2.790e-85 Identity = 143/241 (59.34%), Postives = 170/241 (70.54%), Query Frame = 1
Query: 76 AAASISLLNAADSAALDADLMATPGFSIDQLMELAGLSVACAVAKVYPPS--SRILIICGPGNNGAGDGLVAARHLWQFGYRPTCLYPKPTNKQLFINLVEQCKQLDIEFLPSWPGLQGLES-YDVVLDAMFGFGFKGDPRPPFDTILADLAHGST--------PIVSVDVPSGWSVDEGDARGNGIKPEMLISLTAPKLSARFFEGPHHFLGGRFVPPGIAEKYSLKLPAYPGSEQCVNL 765
AAA ++ L+ D+A +D LM GFS+DQLMELAGLSVA AVA+VY S +R+LIICGPGNNG GDGLVAARHL+ FGY+P YPK T K L+ LV Q + L I F+P Q L YD+V+DAMFGF F G PRPPFD ++ L S PIVSVD+PSGW V+EGD G GIKP+ML+SLTAPKL A+ F GPHHFLGGRFVPP I+ KY L+LP YPG+ CV +
Sbjct: 15 AAAEVTHLSQRDAADIDEQLMGPLGFSVDQLMELAGLSVATAVAEVYKLSEHTRVLIICGPGNNG-GDGLVAARHLYHFGYKPFVCYPKRTAKPLYSGLVTQLESLAIPFVPVEDLPQDLSGQYDIVIDAMFGFSFHGTPRPPFDDLIQMLVSLSVVGDSAKRPPIVSVDIPSGWHVEEGDVSGGGIKPDMLVSLTAPKLCAKKFTGPHHFLGGRFVPPPISSKYGLELPPYPGTSMCVRI 254 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7291.15262.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7291.15262.1 >prot_H-paniculata_contig7291.15262.1 ID=prot_H-paniculata_contig7291.15262.1|Name=mRNA_H-paniculata_contig7291.15262.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=273bp MAATGHLSPGSSPAAASISLLNAADSAALDADLMATPGFSIDQLMELAGLback to top mRNA from alignment at H-paniculata_contig7291:369..6953+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7291.15262.1 ID=mRNA_H-paniculata_contig7291.15262.1|Name=mRNA_H-paniculata_contig7291.15262.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6585bp|location=Sequence derived from alignment at H-paniculata_contig7291:369..6953+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7291:369..6953+ >mRNA_H-paniculata_contig7291.15262.1 ID=mRNA_H-paniculata_contig7291.15262.1|Name=mRNA_H-paniculata_contig7291.15262.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1638bp|location=Sequence derived from alignment at H-paniculata_contig7291:369..6953+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |