mRNA_H-paniculata_contig7276.15249.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig7276.15249.1 vs. uniprot
Match: D7FTI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI4_ECTSI) HSP 1 Score: 393 bits (1009), Expect = 2.960e-123 Identity = 182/297 (61.28%), Postives = 231/297 (77.78%), Query Frame = 2
Query: 2 VQAVSEYLAQVANQYENGLPDQPPDQAGLVLPRRMGERVDLEIPEYAFAKEWLYDRDLTEYR-DGWQTAKVIHWQNKNARLLSPFYAFVLHADETAERYYARLMRDLMHYPEEVYCKASQVISLIRAEDPSGSFSTFHIRRNDFKEYYSFVATGPGEIRTNTEDHLIDGEILYIATDETDRRFFQVFEERFRVRFLQDYYEEAGVSEMNPNYIGMMEQIIASHGRTFTGCWFSTFTAYILRLRGYNGHPKTSSFYYWLPKREDPHSAWLPSNPLWATEWPFGWEGIDDTGVPDAMAP 889
V+AV Y+ QVA+QY+ GLP+ ++A LV+PRR+ +VDLE Y FAK+W+Y R+L EY+ W+ AKVIHW+ K +RLL+PFYAFVLHADE +++Y+ RL+RDLMHYPEEVYCKASQ+ISL+R EDPSG FSTFH+RRNDF + Y V P ++ N+ DHL D E++Y+ATDE D F+ F + RV+FL DYYE AGVSE+NPN IGM+EQ++ASHGRTFTGCW STFTAYILRLRG+ P+ S++ Y+ P++E + LP NPLW TEWPFGWE ID+TGVPD MAP
Sbjct: 478 VKAVEAYMEQVASQYDGGLPELSVERAALVMPRRIDGKVDLEDERYGFAKKWIYGRELLEYQGQPWEEAKVIHWRAKESRLLAPFYAFVLHADEASDQYHKRLLRDLMHYPEEVYCKASQIISLLRQEDPSGEFSTFHVRRNDFGKAYKSVMIDPADVIANSLDHLNDNEVVYVATDEKDLSVFEPFRKNVRVKFLSDYYERAGVSELNPNLIGMLEQVVASHGRTFTGCWLSTFTAYILRLRGHLQMPRKSNWSYYNPRKEYNQAYKLPENPLWMTEWPFGWERIDETGVPDPMAP 774
BLAST of mRNA_H-paniculata_contig7276.15249.1 vs. uniprot
Match: A0A6H5JBR4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBR4_9PHAE) HSP 1 Score: 392 bits (1006), Expect = 1.540e-118 Identity = 181/297 (60.94%), Postives = 232/297 (78.11%), Query Frame = 2
Query: 2 VQAVSEYLAQVANQYENGLPDQPPDQAGLVLPRRMGERVDLEIPEYAFAKEWLYDRDLTEYR-DGWQTAKVIHWQNKNARLLSPFYAFVLHADETAERYYARLMRDLMHYPEEVYCKASQVISLIRAEDPSGSFSTFHIRRNDFKEYYSFVATGPGEIRTNTEDHLIDGEILYIATDETDRRFFQVFEERFRVRFLQDYYEEAGVSEMNPNYIGMMEQIIASHGRTFTGCWFSTFTAYILRLRGYNGHPKTSSFYYWLPKREDPHSAWLPSNPLWATEWPFGWEGIDDTGVPDAMAP 889
V+AV Y+ QVA+QY+ GLP+ ++A LV+PRR+ +VDLE Y+FAK W+Y R+L EY+ W+ AKVIHW+ K +RLL+PFYAFVLHADE +++Y+ RL+RDL+HYPEEVYCKASQ+ISL+R EDPSG FSTFH+RRNDF + Y V P ++ N+ DHL D E++Y+ATDE D F+ F++ RV+FL DYYE AGVSE+NPN +GM+EQ+IASHGRTFTGCW STFTAYILRLRG+ P+ S++ Y+ P++E + LP NPLW TEWPFGWE ID+TGVPD MAP
Sbjct: 947 VKAVEAYMEQVASQYDGGLPELSVEKAALVMPRRIDGKVDLEDESYSFAKRWIYGRELLEYKGQPWEHAKVIHWRAKESRLLAPFYAFVLHADEASDQYHKRLLRDLVHYPEEVYCKASQIISLLRQEDPSGEFSTFHVRRNDFGKTYESVMIDPADVIANSVDHLNDNEVVYVATDEKDLSVFEPFKKNVRVKFLSDYYERAGVSELNPNLVGMLEQVIASHGRTFTGCWLSTFTAYILRLRGHLQMPRKSNWSYFNPRKEYNQAYKLPENPLWMTEWPFGWERIDETGVPDPMAP 1243
BLAST of mRNA_H-paniculata_contig7276.15249.1 vs. uniprot
Match: A0A835YSB5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSB5_9STRA) HSP 1 Score: 253 bits (647), Expect = 1.990e-72 Identity = 128/276 (46.38%), Postives = 177/276 (64.13%), Query Frame = 2
Query: 47 ENGLPDQPPDQAGLVLPRRMGERVDLEIPEYAFA--KEWLYDRDLTEYRDGWQTAKVIHWQNKNARLLSPFYAFVLHADETAERYYARLMRDLMHYPEEVYCKASQVISLIRAEDPSGSFSTFHIRRNDFK-EYYSFVATGPGEIRTNTEDHLIDGEILYIATDETDRRFFQVFEERFRVRFLQDYYEEAGVSEM-NPNYIGMMEQIIASHGRTFTGCWFSTFTAYILRLRGYNGHPKTSSFYYWLPKREDPHSAWLPSNPLWATEWPFGWEGIDD 862
E LP P + G VLP G RV+L P YA + WL R+L EY Q A +IHW+ + +RLL+ FY F H+ +RY+ RLMRDLMHY +E++CKASQV+SL+R E P FS+FHIRR DF E A ++ + E++L GE+++IATDE D+ FF+ + +RFL DY++ A + E+ N NY+ M++ I+ASHGRTFTG WFSTFT+YILR+RGY +P+TS++++ KR+ H P P W TEW W+ ID+
Sbjct: 291 EAALPLVRPGRQGYVLPFEAGGRVNLTDPRYADGDVERWLAGRELLEYTPEMQAAPIIHWRARESRLLTHFYTFARHSAPAVDRYHKRLMRDLMHYRDEMFCKASQVVSLVRGEAPGSVFSSFHIRRGDFNLEKQRMTAE---DMLASVEEYLRPGELVFIATDERDKSFFEPMRRVYEIRFLDDYWQTAALDELSNKNYVPMVDSIVASHGRTFTGTWFSTFTSYILRMRGYLEYPRTSNWHFQPSKRKHAHGDQQPRPPFWMTEWNQCWDNIDN 563
BLAST of mRNA_H-paniculata_contig7276.15249.1 vs. uniprot
Match: A0A836CC39_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC39_9STRA) HSP 1 Score: 234 bits (596), Expect = 7.810e-62 Identity = 128/317 (40.38%), Postives = 178/317 (56.15%), Query Frame = 2
Query: 20 YLAQVANQYENGLPDQPPDQAGLVLPRRMGERVDLEIP-------------------------------EYAFAKE---WLYDRDLTEYRDGWQTAKVIHWQNKNARLLSPFYAFVLHADETAERYYARLMRDLMHYPEEVYCKASQVISLIRAEDPSGSFSTFHIRRNDFKEYYSFVATGPGEIRTNTEDHLIDGEILYIATDETDRRFFQVFEERFR-VRFLQDYYEEAGVSEM-NPNYIGMMEQIIASHGRTFTGCWFSTFTAYILRLRGYNGHPKTSSFYYWLPKREDPHSAWLPSNPLWATEWPFGWEGIDD 862
+ A+VA QY G+P+ P V P R GE +D P +YA K+ WL R+L EY WQ VIHW N RLL+ F+ F+ H D + RY+ RL+RD+MHY +EV+CKASQVI+L+ A+ +S+FH+R DF+ S P +I + ++L E+LYIATDE DR F+ F VRFL DY+ AG+ E+ N N++GM+E +A+HGR FTG W+STFTA+I+R RGY G P +++Y + +R+ H P +P W +EW GWEGID+
Sbjct: 438 FYAKVAEQYVVGVPEMDPGHTAFVFPDRAGEAIDASDPRGCITLYIEDNNTHPGKNLTSDAATGSFATSDYADNKDLQDWLAGRELLEYDKVWQDTPVIHWSNPKTRLLTIFHTFMYHMDPSVNRYHMRLIRDMMHYRDEVFCKASQVIALVNADAGPRGWSSFHLRLGDFQFEESTKIPMP-QIVADAAEYLEPRELLYIATDEKDRGVFEPFRSSGHDVRFLDDYWARAGLDELSNGNFVGMVESAVAAHGRVFTGSWWSTFTAHIVRFRGYIGRPHEAAYYTYRDRRKFLHGYRPPESPYWISEWYQGWEGIDE 753
BLAST of mRNA_H-paniculata_contig7276.15249.1 vs. uniprot
Match: A0A7S2S3S7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S3S7_9STRA) HSP 1 Score: 201 bits (510), Expect = 3.790e-54 Identity = 104/238 (43.70%), Postives = 145/238 (60.92%), Query Frame = 2
Query: 167 RDLTEYRDGWQTAKVIHWQ---NKNARLLSPFYAFVLHADETAERYYARLMRDLMHYPEEVYCKASQVISLIRAE----DPSGSFSTFHIRRNDFKEYYSFVATGPGEIRTNTEDHLIDGEILYIATDETDRRFFQVFEERFRVRFLQDYYEEAGVSEMNPNYIGMMEQIIASHGRTFTGCWFSTFTAYILRLRGYNGHPKTSSFYYWLPKREDPHSAWLPSNPLWATEWPFGWEGID 859
R + + W+TAKV+H+ NK RLL+ FY F AD + +R R RD Y +E++C A++V+ L+R + P+ F+ FH+R DF+ + V E+ NT D L GE++YIATDE + FF F E F VRFL DY+EEAG++++ PN++GM++ IIAS R F G WFSTF+ YI+RLRGY G + SFYY+ K+ S PS+P + EWP W GID
Sbjct: 193 RTVLPFDGSWRTAKVVHFASFPNKGYRLLTHFYTFFFFADPSMDRRIKRFTRDHFRYTDEIWCAAARVLRLLRRDAQAISPNMPFTAFHVRHGDFQ--FKVVRVSAKEMIDNTRDILTPGELVYIATDEKNTSFFDEFREEFTVRFLGDYFEEAGLADVQPNFLGMIDTIIASRARIFVGTWFSTFSGYIIRLRGYYGTDR-DSFYYYPKKKFVMQSDDPPSDPFYTREWPTAWRGID 427
BLAST of mRNA_H-paniculata_contig7276.15249.1 vs. uniprot
Match: A0A7S1YBV7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YBV7_9STRA) HSP 1 Score: 186 bits (472), Expect = 5.730e-49 Identity = 102/274 (37.23%), Postives = 154/274 (56.20%), Query Frame = 2
Query: 65 QPPDQAG---LVLPRRMGERVDLE-IPEYAFAKEWLY---DRDLTEYRDGWQTAKVIHWQ--NKNARLLSPFYAFVLHADETAERYYARLMRDLMHYPEEVYCKASQVISLIRAEDPSGSFSTFHIRRNDFKEYYSFVATGPGEIRTNTEDHLIDGEILYIATDETDRRFFQVFEERFRVRFLQDYYEEAGVSEMNPNYIGMMEQIIASHGRTFTGCWFSTFTAYILRLRGYNGHPKTSSFYYWLPKREDPHSAWLPSNPLWATEWPFGWEGID 859
QP +AG L+ +R+ E E +PE + + DR + Y W + ++HW + + RLL+ FY F+L D + +Y R +RD +HY +E+YC A +VI+ +R E S FST H+RR DF+ Y+ V E+ NT++ E LYIATDE +R FF + +R L DY++ A + ++ Y+GM++ ++A+ GRTF G WFSTF+ +I RLRGY G+ S+Y WL ++ + P+ A EWP W GID
Sbjct: 104 QPQVEAGNDCLIFDQRVYETDSYENVPEDLLEQSQRFCGKDRKMHYYNSTWTSPTLLHWNAASLDTRLLNHFYTFMLFTDPVVDNFYKRFVRDYLHYNDEIYCAAGKVINALRKE--SEMFSTMHVRRGDFQ--YTVVKLPAEELYENTKEVWKTNEPLYIATDEMNRTFFDPIAKHHPIRVLGDYWDIANLGSLDKTYLGMIDTVVAAQGRTFAGTWFSTFSGFINRLRGYYGYSMNDSWYSWLERKTVVQNWTYPNGNYPAREWPISWIGID 373
BLAST of mRNA_H-paniculata_contig7276.15249.1 vs. uniprot
Match: A0A7S2F220_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F220_9STRA) HSP 1 Score: 183 bits (464), Expect = 8.850e-49 Identity = 120/317 (37.85%), Postives = 170/317 (53.63%), Query Frame = 2
Query: 8 AVSEYLA--QVANQYENGLPDQPPDQAGLVLPR----------RMGERVDLEIPEYAFAKEWLYDRDLTEYRDGWQTAKVIHWQNK-----NARLLSPFYAFVLHADETAERYYARLMRDLMHYPEEVYCKASQVISLIRAEDPSGSFSTFHIRRNDFKEYYSFVATGPGEIRTNTEDHLIDGEILYIATDETDRR--------FFQVFEERFRVRFLQDYYEEAGVSEM-NPNYIGMMEQIIASHGRTFTGCWFSTFTAYILRLRGYNGHPKTSSFYYWLPKREDPHSAWLPSNPL---WATEWPFGWEGIDDTGV 871
AV+EYL +VA EN PD D+ G V PR + ++ D E+ + +L R+ EY + +VIH+ + RLL+ Y F D T R + RL+RD +HY ++C A + I + E +GSFST H+RRNDF+ Y V +I + + L DGE+LYIATDE + FF+ +R+R+RFL+D + A V + N N IGM EQ++AS GR F G W+STF+ YI+RLRGY G +T+S++YW P++ D H P +A EWP W IDD G+
Sbjct: 16 AVTEYLRDPKVA---EN--PDWKADKMGFVFPRDPNKSVIEERQSSDKADKEV------RAFLLGREQLEYSSYIRHRRVIHFAVQAPPLPRRRLLTQAYLFQFFMDPTVRRVHLRLVRDFIHYRSNIFCTAERAIRHLLLEG-NGSFSTLHVRRNDFQ--YKKVWLDAKDIVASMKGLLKDGELLYIATDEKNISDPGNPSIDFFEPLRKRYRLRFLRDVADVARVDGLGNDNLIGMFEQVVASQGRVFAGAWWSTFSGYIMRLRGYYGFNRTTSYFYWPPRKFDMHQGDYPVGKFTSSYAREWPIAWTDIDDNGM 318
BLAST of mRNA_H-paniculata_contig7276.15249.1 vs. uniprot
Match: D7FR32_ECTSI (GDP-fucose protein O-fucosyltransferase, family GT65 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR32_ECTSI) HSP 1 Score: 182 bits (462), Expect = 1.140e-47 Identity = 111/288 (38.54%), Postives = 163/288 (56.60%), Query Frame = 2
Query: 86 LVLPRRMGERVDLEIPEYAFA-KEWLYDRDLTEYRDGWQTAKVIHWQ----------NKNARLLSPFYAFVLHADETAERYYARLMRDLMHYPEEVYCKASQVISLIRAEDPSGSFSTFHIRRNDFKEYYSFVATG-PGEIRTN-TEDHLIDGEILYIATDETDRRFFQVFEERFRVRFLQDYYEEAGVSEMNPNYIGMMEQIIASHGRTFTGCWFSTFTAYILRLRGYNGHPKTSSFYYWLPKR---EDPHSAWLPSNPLWATEWPFGWEGID---------DTGVP 874
LV P G+ + LE + +++L R Y + +KVIH+ +KN R L FYAF+LHAD + R RD + Y + ++CKASQ++S++ E GSFS+ H+RR D + A G E N T +L +GE++YIATDE + FF+ F ERF VRFL D+ E+AG+ + N +GM+EQ++ SHGRTFTG ++S+F+A++ R R Y G P S++++W K+ DP + P+ P +A E+P GID DTGVP
Sbjct: 108 LVFPSSPGKPLPLEDQGFVQRLQDFLNTRQAVTYDEDAWNSKVIHFSGDCHDSRAEGSKNRRPLIHFYAFMLHADTLVDSRVKRFARDRLRYRDRIFCKASQIVSMLLEESEGGSFSSCHVRRRDLINSLTQEAVGMSAEAMVNSTLGYLREGELVYIATDEENYDFFEPFRERFEVRFLADFVEKAGLRGVPSNQLGMIEQVVISHGRTFTGTFYSSFSAHVFRHRLYLGKPLDSNYHFWAEKQTVLHDPDAH--PAAPYFAREFPTCCVGIDVEPPGGGGDDTGVP 393
BLAST of mRNA_H-paniculata_contig7276.15249.1 vs. uniprot
Match: W7U3X1_9STRA (Fucosyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3X1_9STRA) HSP 1 Score: 185 bits (469), Expect = 3.400e-47 Identity = 99/263 (37.64%), Postives = 149/263 (56.65%), Query Frame = 2
Query: 86 LVLPRRMGERV-DLEIPEYAFAKEWLYDRDLTEYRDGWQTAKVIHW-QNKNARLLSPFYAFVLHADETAERYYARLMRDLMHYPEEVYCKASQVISLIRAEDPSGSFSTFHIRRND--FKEYYSFVATGPGEIRTNTEDHLIDGEILYIATDETDRRFFQVFEERFRVRFLQDYYEEAGVSEMNPNYIGMMEQIIASHGRTFTGCWFSTFTAYILRLRGYNGHPKTSSFYYWLPKREDPHSAWLPSNPLWATEWPFGWEGIDD 862
L P G+ + D + KE+ R Y + Q AKVIH+ + +R+L+ FY F D +R R +R +HY +EV+C A ++I+ + E G + HIRR D FKE V +I NT+D L + E +YIATDETD + VF +RF V FL+D++E G+ ++N NY+GM+EQI+ S + F G WFSTFT YI R+RGY G +++Y++ +++ + + P +P + EWP GW ID+
Sbjct: 305 LAFPETPGKPIEDHSAEQQERLKEFCGKRTPVHYNETLQDAKVIHFGAGQGSRVLAHFYTFEHFMDPALDRAVKRFVRSYIHYRDEVFCAAGRIIAAMETEAGPGGYKALHIRRGDLQFKE----VKIPAEKIIANTKDILKENETIYIATDETDEAYLDVFRKRFNVFFLKDFHERVGLPKLNQNYMGMLEQIVCSRSQVFIGTWFSTFTGYITRMRGYYGFDYRTNWYHFGLRKDSFQTEYHPRDPWYVREWPEGWVNIDE 563
BLAST of mRNA_H-paniculata_contig7276.15249.1 vs. uniprot
Match: A0A7S2S6I2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S6I2_9STRA) HSP 1 Score: 175 bits (444), Expect = 4.380e-47 Identity = 98/224 (43.75%), Postives = 130/224 (58.04%), Query Frame = 2
Query: 209 VIHWQNKNA---RLLSPFYAFVLHADETAERYYARLMRDLMHYPEEVYCKASQVISLIRAEDPSGSFSTFHIRRNDFKEYYSFVATGPGEIRTNTEDHLIDGEILYIATDETDRRFFQVFEERFRVRFLQDYYEEAGVSEM-NPNYIGMMEQIIASHGRTFTGCWFSTFTAYILRLRGYNGHPKTSSFYYWLPKREDPHSAWLPSNPL---WATEWPFGWEGID 859
V+H N RLL+ FY FV D A+R RL+R+ +HY + V+C + + + E GSFST H+RR DF+ Y V +I + D L +GE++Y+ATDE R FF +R+RFL+D + E+ NPN IGM+EQI+AS GRTFTG WFSTFT YI RLRGY G KT+S+YYW K+ H P + +A EWP W+ D
Sbjct: 1 VLHIATDNKSHRRLLTHFYLFVKALDPVAQRESLRLVRNYLHYRQPVFCACLRAVQALETEG-GGSFSTMHVRRGDFQ--YKNVKLPAEDILRDIRDVLQEGELVYVATDEQGRDFFAPLAAHYRLRFLRDVQSVLRLEELGNPNLIGMVEQILASRGRTFTGTWFSTFTGYITRLRGYYGFNKTTSYYYWAKKKLQMHGPDYPVGKITSVFAREWPVAWKWKD 221 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7276.15249.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7276.15249.1 >prot_H-paniculata_contig7276.15249.1 ID=prot_H-paniculata_contig7276.15249.1|Name=mRNA_H-paniculata_contig7276.15249.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=263bp MGERVDLEIPEYAFAKEWLYDRDLTEYRDGWQTAKVIHWQNKNARLLSPFback to top mRNA from alignment at H-paniculata_contig7276:1022..8617+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7276.15249.1 ID=mRNA_H-paniculata_contig7276.15249.1|Name=mRNA_H-paniculata_contig7276.15249.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7596bp|location=Sequence derived from alignment at H-paniculata_contig7276:1022..8617+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7276:1022..8617+ >mRNA_H-paniculata_contig7276.15249.1 ID=mRNA_H-paniculata_contig7276.15249.1|Name=mRNA_H-paniculata_contig7276.15249.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1578bp|location=Sequence derived from alignment at H-paniculata_contig7276:1022..8617+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |