|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1263 |
| Cds size | 792 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7236.15210.1 >prot_H-paniculata_contig7236.15210.1 ID=prot_H-paniculata_contig7236.15210.1|Name=mRNA_H-paniculata_contig7236.15210.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=264bp
MDTSYLQYGVFVPRARVETPRKKEPGANSAPFTWGQLNGRWTKIGADGKP
LGVPKPLSPPSSSTNTTLSTSTSRELDALDRGSSSGNSARNYGSSVDNLP
TGDKILYPGKDGGVQGGRSPAPVTDARGAGGSRNERAGGVRADQDEEEDA
ATSTAAEGAGSLRPSNTWETSPPTSSEGDNETEENDDKQEEQEDTEEHSS
LHLLSDDDLYGDGAPVSATQMLTPGVSRTYSIDKIGGKFFGEDIGTETNG
SISGRSALEGEKEA back to topmRNA from alignment at H-paniculata_contig7236:3445..5076+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig7236.15210.1 ID=mRNA_H-paniculata_contig7236.15210.1|Name=mRNA_H-paniculata_contig7236.15210.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1632bp|location=Sequence derived from alignment at H-paniculata_contig7236:3445..5076+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTCCCTCCTTTTGTCTTTCCCCACCAAAAACTGGTGAGACATATAAAGAG
GAGATATCTGCAGTCATCTTACCATCGTCATATAAAATACACGACATCAA
GAGTCTAAAGGACTTTGTCTGCCAGGTCTCCACAGCTAGACCCGTTCTGA
GCCTCAACCTCGAAAGCAGCTCTTTCTCTCCCTGCGGACTCGCCTCGTCC
ACTTTGGAAAGTCACCTGGTCCTCGACTGTTGTGAACATTCGTATAAGAA
GTGTCAGGGTCTCAGGGTGGGGGGTGCGGCGCATCTTTCTCCCCTTGCTC
CCAGTTTCTGGCCGGGTTCGCAGCCAGCCTTGAGGTAGCCACTTGAGAGG
ACTTACCATTCACATCCAAGGTCAGGAGAGATAGGCAGGGAAGGAGGAAC
GAGCCTGGAGTTTTCTTCGGAGGTGGAAGAGGAAGGTACTACTGGTGATG
GAATTATCAAGTCATGCTCGTGTATCTGTTGAAGAATCAATATACCCTGT
GTGATACAAACGGGCGATGATTCATCATGTATGCTATCGTGATTATAAAG
AGAAGAGTCAGCAGTAGCGACAGACAGTATCGAGGTTTGGCGTACATATT
GAAGATTGTGTGTTACTGAATCGTGTCCGTTGCTTAATGGAAACTGGAAG
CAACAGAATGCGACCTTGGTGGAAAAAAGTTGTGTGACGCTCAAGGGTGG
GGCACGTAAGGAGAAATACTCCCTGATGCGTTGACCGAAAACCGCAACCC
AGCGAAGCTAATTACGCACACCGCTCGCTTTGTTTGCCTTTATTGCCCCT
GTGCAGGTTGTTTTGCTTTGTTCAAAGTCATCAAAACAATATGGACACGA
GCTACCTCCAGTATGGAGTTTTCGTTCCACGAGCACGGGTCGAAACACCG
CGAAAAAAGGAGCCGGGGGCGAATAGTGCCCCGTTCACCTGGGGTCAACT
GAACGGCAGATGGACCAAGATCGGTGCTGACGGCAAGCCGCTGGGCGTCC
CCAAGCCGCTCTCGCCACCGTCGTCCTCAACGAACACCACGTTGTCCACG
TCCACCTCGCGCGAACTCGACGCCTTGGATCGAGGGTCGAGCAGCGGCAA
CAGCGCACGAAATTATGGCTCCAGCGTGGACAATTTGCCAACAGGGGACA
AAATATTGTATCCAGGCAAGGATGGCGGGGTACAAGGCGGTCGCAGCCCA
GCACCCGTGACCGATGCCCGTGGCGCCGGTGGCAGCAGGAATGAAAGGGC
GGGAGGAGTGAGAGCTGATCAAGATGAAGAGGAAGATGCAGCGACATCGA
CAGCAGCAGAGGGAGCGGGATCGCTGCGCCCGTCAAACACATGGGAAACC
TCCCCGCCGACCAGTAGCGAGGGTGACAACGAGACGGAGGAGAACGATGA
CAAGCAAGAAGAGCAGGAGGATACAGAAGAGCACTCCTCACTACACTTGC
TCAGCGATGATGACCTCTACGGCGACGGCGCGCCCGTGTCTGCGACTCAG
ATGCTCACGCCCGGCGTGTCTCGCACGTACAGCATCGATAAAATCGGTGG
GAAGTTTTTCGGGGAGGATATTGGTACGGAGACAAATGGGTCTATCAGCG
GGAGGTCGGCACTCGAAGGGGAGAAGGAGGCG back to topCoding sequence (CDS) from alignment at H-paniculata_contig7236:3445..5076+ >mRNA_H-paniculata_contig7236.15210.1 ID=mRNA_H-paniculata_contig7236.15210.1|Name=mRNA_H-paniculata_contig7236.15210.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1584bp|location=Sequence derived from alignment at H-paniculata_contig7236:3445..5076+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGACACGAGCTACCTCCAGTATGGAGTTTTCGTTCCACGAGCACGGGT
CGAAACACCGCGAAAAAAGGAGCCGGGGGCGAATAGTGCCCCGTTCACCT
GGGGTCAACTGAACGGCAGATGGACCAAGATCGGTGCTGACGGCAAGCCG
CTGGGCGTCCCCAAGCCGCTCTCGCCACCGTCGTCCTCAACGAACACCAC
GTTGTCCACGTCCACCTCGCGCGAACTCGACGCCTTGGATCGAGGGTCGA
GCAGCGGCAACAGCGCACGAAATTATGGCTCCAGCGTGGACAATTTGCCA
ACAGGGGACAAAATATTGTATCCAGGCAAGGATGGCGGGGTACAAGGCGG
TCGCAGCCCAGCACCCGTGACCGATGCCCGTGGCGCCGGTGGCAGCAGGA
ATGAAAGGGCGGGAGGAGTGAGAGCTGATCAAGATGAAGAGGAAGATGCA
GCGACATCGACAGCAGCAGAGGGAGCGGGATCGCTGCGCCCGTCAAACAC
ATGGGAAACCTCCCCGCCGACCAGTAGCGAGGGTGACAACGAGACGGAGG
AGAACGATGACAAGCAAGAAGAGCAGGAGGATACAGAAGAGCACTCCTCA
CTACACTTGCTCAGCGATGATGACCTCTACGGCGACGGCGCGCCCGTGTC
TGCGACTCAGATGCTCACGCCCGGCGTGTCTCGCACGTACAGCATCGATA
AAATCGGTGGGAAGTTTTTCGGGGAGGATATTGGTACGGAGACAAATGGG
TCTATCAGCGGGAGGTCGGCACTCGAAGGGGAGAAGGAGGCGATGGACAC
GAGCTACCTCCAGTATGGAGTTTTCGTTCCACGAGCACGGGTCGAAACAC
CGCGAAAAAAGGAGCCGGGGGCGAATAGTGCCCCGTTCACCTGGGGTCAA
CTGAACGGCAGATGGACCAAGATCGGTGCTGACGGCAAGCCGCTGGGCGT
CCCCAAGCCGCTCTCGCCACCGTCGTCCTCAACGAACACCACGTTGTCCA
CGTCCACCTCGCGCGAACTCGACGCCTTGGATCGAGGGTCGAGCAGCGGC
AACAGCGCACGAAATTATGGCTCCAGCGTGGACAATTTGCCAACAGGGGA
CAAAATATTGTATCCAGGCAAGGATGGCGGGGTACAAGGCGGTCGCAGCC
CAGCACCCGTGACCGATGCCCGTGGCGCCGGTGGCAGCAGGAATGAAAGG
GCGGGAGGAGTGAGAGCTGATCAAGATGAAGAGGAAGATGCAGCGACATC
GACAGCAGCAGAGGGAGCGGGATCGCTGCGCCCGTCAAACACATGGGAAA
CCTCCCCGCCGACCAGTAGCGAGGGTGACAACGAGACGGAGGAGAACGAT
GACAAGCAAGAAGAGCAGGAGGATACAGAAGAGCACTCCTCACTACACTT
GCTCAGCGATGATGACCTCTACGGCGACGGCGCGCCCGTGTCTGCGACTC
AGATGCTCACGCCCGGCGTGTCTCGCACGTACAGCATCGATAAAATCGGT
GGGAAGTTTTTCGGGGAGGATATTGGTACGGAGACAAATGGGTCTATCAG
CGGGAGGTCGGCACTCGAAGGGGAGAAGGAGGCG back to top
|