mRNA_H-paniculata_contig7216.15194.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7216.15194.1 vs. uniprot
Match: A0A6H5JK80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK80_9PHAE) HSP 1 Score: 178 bits (451), Expect = 1.910e-47 Identity = 100/233 (42.92%), Postives = 140/233 (60.09%), Query Frame = 2
Query: 2 FVNYIKEFKRYIVDNVLDDGKPHFLVFDCHASHVNLEVIQVAMSLNIEIFQIPAHSSHMIQRLDVTAFGTFKKAVTTVLTSLGWQNAYES*HGRCYRPS-----LGG----EFHDIVNQDIIQGARLWLVDMQRAINRLQGVGKRKPRPDDRLPFADIPVATTDNELTESFGPCSVRRQQNSGHTIAVLRVGTVIFGEFYKIQKWVTCPVISRSAARVTDGGLLTCEDVLSKY 673
FVNYI++F R ++D L +G PH LV D HASHV EV+++A LNI ++QIP+HSSH++Q LDV +FG+FK +T VL++ +N GR S LG F + N GA LW VD +RA+ RLQGVGKRK R R P DI VA +D +L ++ GP +VR Q G + + + TV+ G F K +K I+R + + +GG++TC+DV+ KY
Sbjct: 264 FVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKWEITKVLSAFPARNG-----GRVPAKSDMLGILGDAWLRSFSEEQNISSFAGAGLWPVDGERAMGRLQGVGKRKERSGARPPVEDITVAISDKDLADNLGPRTVRELQQKGQCVKGILINTVMLGAFVKAKKKQKKLAITRKSQGLPEGGVITCDDVMPKY 491
BLAST of mRNA_H-paniculata_contig7216.15194.1 vs. uniprot
Match: B2KWI5_ECTSI (Transposase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI5_ECTSI) HSP 1 Score: 179 bits (453), Expect = 2.020e-47 Identity = 101/233 (43.35%), Postives = 139/233 (59.66%), Query Frame = 2
Query: 2 FVNYIKEFKRYIVDNVLDDGKPHFLVFDCHASHVNLEVIQVAMSLNIEIFQIPAHSSHMIQRLDVTAFGTFKKAVTTVLTSLGWQNAYES*HGRCYRPS-----LGG----EFHDIVNQDIIQGARLWLVDMQRAINRLQGVGKRKPRPDDRLPFADIPVATTDNELTESFGPCSVRRQQNSGHTIAVLRVGTVIFGEFYKIQKWVTCPVISRSAARVTDGGLLTCEDVLSKY 673
FVNYI++F R ++D L +G PH LV D HASHV EVI++A LNI ++QIP+HSSH++Q LDV +FG+FK+ +T VL++ +N GR S LG F + N GA LW VD +RA+ RLQGVGKRK R R P DI VA +D L ++ GP +VR Q G + + + TV+ G F K +K I+R + + +GG +TC+DV+ KY
Sbjct: 256 FVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVIKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKREITKVLSAFPARNG-----GRVPAKSDMLGILGDAWLRSFSEQQNISSFAGAGLWPVDGERAMGRLQGVGKRKERSGARPPVEDITVAISDKNLADNLGPRTVRELQQKGQCVKGILINTVMLGAFVKAKKKQKKLAITRKSQGLPEGGAITCDDVMHKY 483
BLAST of mRNA_H-paniculata_contig7216.15194.1 vs. uniprot
Match: A0A6H5J9B8_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9B8_9PHAE) HSP 1 Score: 164 bits (415), Expect = 2.020e-44 Identity = 98/232 (42.24%), Postives = 131/232 (56.47%), Query Frame = 2
Query: 2 FVNYIKEFKRYIVDNVLDDGKPHFLVFDCHASHVNLEVIQVAMSLNIEIFQIPAHSSHMIQRLDVTAFGTFKKAVTTVLTSLGWQNAYES*HGRC-YRPSLGG--------EFHDIVNQDIIQGARLWLVDMQRAINRLQGVGKRKPRPDDRLPFADIPVATTDNELTESFGPCSVRRQQNSGHTIAVLRVGTVIFGEFYKIQKWVTCPVISRSAARVTDGGLLTCEDVLSK 670
F+ Y K+F + + D + DGKPH LV D HAS+V+ EVI++AM LNI +FQ+P+H+SH+ Q LDV AFGTFKK VTTVL Q+ Y + G + + G F N+ G LW VDM RA+ RLQG KRK P R P D+P+A T +L E G R+ + GHTI L+VGTV+ G +K SR + + DGG + E+ L+K
Sbjct: 76 FIKYFKDFHKQLDDRGVLDGKPHTLVLDEHASYVSYEVIKLAMELNIILFQLPSHTSHITQPLDVVAFGTFKKEVTTVL-----QDYYHANGGLLPLKRDVPGVIAAAWQRSFTPERNKASFGGVGLWPVDMDRALTRLQGTAKRKEGPTGRPPLEDVPIAMTHEQLEEVIGERGPRQLKAGGHTITGLKVGTVMLGGLLSQRKRAKKLATSRGSLGLPDGGNINSEEFLAK 302
BLAST of mRNA_H-paniculata_contig7216.15194.1 vs. uniprot
Match: A0A6H5KGL1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGL1_9PHAE) HSP 1 Score: 163 bits (412), Expect = 9.940e-44 Identity = 93/227 (40.97%), Postives = 129/227 (56.83%), Query Frame = 2
Query: 2 FVNYIKEFKRYIVDNVLDDGKPHFLVFDCHASHVNLEVIQVAMSLNIEIFQIPAHSSHMIQRLDVTAFGTFKKAVTTVLTSLGWQNAYES*HGRCYRPSLGGEFHDIV----NQDIIQGARLWLVDMQRAINRLQGVGKRKPRPDDRLPFADIPVATTDNELTESFGPCSVRRQQNSGHTIAVLRVGTVIFGEFYKIQKWVTCPVISRSAARVTDGGLLTCEDVLSK 670
F+ Y+K+F + + D + DGKPH LV D HASHV+ E I++AM LNI +F++P+H+SH+ Q LDV AFGTFKK VT VL N R + + + + N+ GA LW VDM RA+ RLQG KRK P R P D+P+A T +L E+ G +R+ + GHTI L+VGTV+ G +K R + + DGG + E+ L+K
Sbjct: 76 FIMYLKDFHKQLDDRGVLDGKPHILVLDGHASHVSYEFIKLAMDLNIILFKLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGLLPLKRDVPGVIAAAWQNSLTPERNKASFGGAGLWPVDMDRALTRLQGTAKRKEGPTGRPPLEDVPIAMTHEQLEEAIGERGLRQLKAGGHTITGLKVGTVMLGGLLTRRKRAKKLATLRGSLGLPDGGNINSEEFLAK 302
BLAST of mRNA_H-paniculata_contig7216.15194.1 vs. uniprot
Match: A0A6H5JV04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV04_9PHAE) HSP 1 Score: 161 bits (408), Expect = 3.040e-41 Identity = 89/227 (39.21%), Postives = 129/227 (56.83%), Query Frame = 2
Query: 2 FVNYIKEFKRYIVDNVLDDGKPHFLVFDCHASHVNLEVIQVAMSLNIEIFQIPAHSSHMIQRLDVTAFGTFKKAVTTVLTSL----GWQNAYES*HGRCYRPSLGGEFHDIVNQDIIQGARLWLVDMQRAINRLQGVGKRKPRPDDRLPFADIPVATTDNELTESFGPCSVRRQQNSGHTIAVLRVGTVIFGEFYKIQKWVTCPVISRSAARVTDGGLLTCEDVLSK 670
F+ Y+K+F + + L DGKPH L+ D HASHV++EVIQ+AM LNI +FQ+P+H+SH+ Q LDV AFG FK+ VT VL+ G + + G F N+ GA LW V+M+RA++RL+G KR R P D+P+A + +L + G +R+ + +GH LRV TV+ G + +K SR + + DGG +T ED L+K
Sbjct: 254 FIKYLKDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRLRGTAKRNENQTGRPPLKDVPIAVGNEQLEQDIGERGMRQLKAAGHLTTGLRVSTVMLGSVIRQRKRAKKMATSRGSLGLPDGGNITAEDFLAK 480
BLAST of mRNA_H-paniculata_contig7216.15194.1 vs. uniprot
Match: A0A6H5KVC0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVC0_9PHAE) HSP 1 Score: 154 bits (388), Expect = 6.460e-41 Identity = 87/230 (37.83%), Postives = 129/230 (56.09%), Query Frame = 2
Query: 2 FVNYIKEFKRYIVDNVLDDGKPHFLVFDCHASHVNLEVIQVAMSLNIEIFQIPAHSSHMIQRLDVTAFGTFKKAVTTVLTSLGWQNAYES*HGRCY-RPSLGGEFHDIV--------NQDIIQGARLWLVDMQRAINRLQGVGKRKPRPDDRLPFADIPVATTDNELTESFGPCSVRRQQNSGHTIAVLRVGTVIFGEFYKIQKWVTCPVISRSAARVTDGGLLTCEDVL 664
F+ Y+K+F + D L DGKPH + D HASHV++EVI++AM+L I +FQ+P+H+SH+ Q LDV AFG FKK+ T VL S Y + G + + G D N+ GA LW V+ +RA+ RL+G K+K R D+R P D+P+A + +L + ++R + GHT+ +RVGTV+ G +K SR + + DGG +T + L
Sbjct: 6 FIAYLKDFHEQLGDRGLLDGKPHTFLLDGHASHVSVEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSATRVLASF-----YHNSGGLLLLKRDMPGAIADAWKLSFTPERNKSSFAGAGLWPVNKERALGRLKGTAKKKARRDERPPLQDVPIAALNEQLEKDIAERALRVLRGQGHTVTGIRVGTVLLGGLLTQRKRAKKMATSRGSLGLPDGGNITAPEFL 230
BLAST of mRNA_H-paniculata_contig7216.15194.1 vs. uniprot
Match: A0A6H5JGP6_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP6_9PHAE) HSP 1 Score: 157 bits (398), Expect = 3.610e-40 Identity = 97/285 (34.04%), Postives = 139/285 (48.77%), Query Frame = 2
Query: 2 FVNYIKEFKRYIVDNVLDDGKPHFLVFDCHASHVNLEVIQVAMSLNIEIFQIPAHSSHMIQRLDVTAFGTFKKAVTTVLTSL--------------------GWQNAYES*HGRCYRPSLG-----GE------------------------------------FHDIVNQDIIQGARLWLVDMQRAINRLQGVGKRKPRPDDRLPFADIPVATTDNELTESFGPCSVRRQQNSGHTIAVLRVGTVIFGEFYKIQKWVTCPVISRSAARVTDGGLLTCEDVLSKY 673
FVNYI++F R ++D L +G PH LV D HASHV EV+++A LNI ++QIP+HSSH++Q LDV +FG+FK+ + VL++ W ++ G GE F + N GA LW VD +RA+ RLQGVGKRK R R P DI VA +D +L ++ GP +VR Q G + + + TV+ G F K +K I+R + + +GG++TC+DV+ KY
Sbjct: 215 FVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKREIPKVLSAFQARNGGRVPAKSDMLGLLGDAWLRSFSEEQNISSFAGAGLWLVDGERAMGQLQGWRFPTRILPTVPAKSDMLGILGDAWLRSFSEEQNISSFAGAGLWPVDGERAMGRLQGVGKRKERSGARPPVEDITVAISDKDLADNLGPRTVRELQQKGQCVKGILINTVMVGAFVKAKKKQKKLAITRKSQGLPEGGVITCDDVMQKY 499
BLAST of mRNA_H-paniculata_contig7216.15194.1 vs. uniprot
Match: A0A6H5JJ12_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ12_9PHAE) HSP 1 Score: 159 bits (402), Expect = 6.020e-40 Identity = 88/227 (38.77%), Postives = 128/227 (56.39%), Query Frame = 2
Query: 2 FVNYIKEFKRYIVDNVLDDGKPHFLVFDCHASHVNLEVIQVAMSLNIEIFQIPAHSSHMIQRLDVTAFGTFKKAVTTVLTSL----GWQNAYES*HGRCYRPSLGGEFHDIVNQDIIQGARLWLVDMQRAINRLQGVGKRKPRPDDRLPFADIPVATTDNELTESFGPCSVRRQQNSGHTIAVLRVGTVIFGEFYKIQKWVTCPVISRSAARVTDGGLLTCEDVLSK 670
F+ Y+K+F + + L DGKPH L+ D HASHV++EVIQ+AM LNI +FQ+P+H+SH+ Q LDV AFG FK+ VT VL+ G + + G F N+ GA LW V+M+RA++RL+G KR R P D+P+A + +L + G +R+ + +GH LRV TV+ G + +K SR + + DG +T ED L+K
Sbjct: 495 FIKYLKDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRLRGTAKRNENQTGRPPLKDVPIAVGNEQLEQDIGERGMRQLKAAGHLTTGLRVSTVMLGSVIRQRKRAKKMATSRGSLGLPDGANITAEDFLAK 721
BLAST of mRNA_H-paniculata_contig7216.15194.1 vs. uniprot
Match: A0A6H5JGL8_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGL8_9PHAE) HSP 1 Score: 155 bits (391), Expect = 6.670e-40 Identity = 92/227 (40.53%), Postives = 126/227 (55.51%), Query Frame = 2
Query: 2 FVNYIKEFKRYIVDNVLDDGKPHFLVFDCHASHVNLEVIQVAMSLNIEIFQIPAHSSHMIQRLDVTAFGTFKKAVTTVLTSLGWQNAYES*HGRCYRPSLGG----EFHDIVNQDIIQGARLWLVDMQRAINRLQGVGKRKPRPDDRLPFADIPVATTDNELTESFGPCSVRRQQNSGHTIAVLRVGTVIFGEFYKIQKWVTCPVISRSAARVTDGGLLTCEDVLSK 670
F+ Y+K+ + + D + DGKP+ LV D HASHV+ EVI++AM L+ +FQ+P+H+SH+ Q LDV AFGTFKK VT VL N R + F N+ + GA LW VDM RA+ RLQG KRK P R P D+P+A T +L E+ G +R+ + G TI L VGTV+ G +K SR + + DGG + E+ L+K
Sbjct: 76 FIKYLKDVHKQLDDQGVLDGKPYILVLDGHASHVSYEVIKLAMELDTILFQLPSHTSHITQPLDVVAFGTFKKDVTKVLQDYNHANGGVLPLKRGVPGVIAAAWQRSFTPERNKASLGGAGLWPVDMDRALTRLQGTVKRKEGPTGRPPLEDVPIAMTHEQLEEAIGERGLRQLKVGGRTITGLEVGTVMLGGRLTQRKRAKKLATSRGSLGLPDGGNINSEEFLAK 302
BLAST of mRNA_H-paniculata_contig7216.15194.1 vs. uniprot
Match: A0A6H5L2E0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E0_9PHAE) HSP 1 Score: 152 bits (383), Expect = 1.260e-38 Identity = 85/226 (37.61%), Postives = 130/226 (57.52%), Query Frame = 2
Query: 2 FVNYIKEFKRYIVDNVLDDGKPHFLVFDCHASHVNLEVIQVAMSLNIEIFQIPAHSSHMIQRLDVTAFGTFKKAVTTVLTSLGWQNAYES*HGRCYRPSLGGE-----FHDIVNQDIIQGARLWLVDMQRAINRLQGVGKRKPRPDDRLPFADIPVATTDNELTESFGPCSVRRQQNSGHTIAVLRVGTVIFGEFYKIQKWVTCPVISRSAARVTDGGLLTCEDVL 664
F+ Y+K+F + + D L DGKPH L+ D HASHV++EV ++AM+L I FQ+P+H+SH+ Q LDV AFG FKK+VT VL S + N+ S + P + + F +N+ GA LW V+ +RA+ +L+G +K R D+R P D+P+A + +L G ++R + GHT+ +R GTV+ +K SR + + DGG +T + L
Sbjct: 212 FIAYLKDFHKQLGDRGLLDGKPHILLLDGHASHVSVEVSKLAMNLKIISFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASF-YHNSGGSLPLKRDMPGVIADAWKLSFAPEINKSSFAGAGLWPVNKERALGQLKGTANKKERRDERPPLQDVPIAALNEQLEIDIGERALRVLKGQGHTVTGIREGTVLLDGLLTQRKHAKKMATSRGSLGLPDGGNITAPEFL 436 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7216.15194.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7216.15194.1 >prot_H-paniculata_contig7216.15194.1 ID=prot_H-paniculata_contig7216.15194.1|Name=mRNA_H-paniculata_contig7216.15194.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=197bp MQRAINRLQGVGKRKPRPDDRLPFADIPVATTDNELTESFGPCSVRRQQNback to top mRNA from alignment at H-paniculata_contig7216:7120..8077+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7216.15194.1 ID=mRNA_H-paniculata_contig7216.15194.1|Name=mRNA_H-paniculata_contig7216.15194.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=958bp|location=Sequence derived from alignment at H-paniculata_contig7216:7120..8077+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7216:7120..8077+ >mRNA_H-paniculata_contig7216.15194.1 ID=mRNA_H-paniculata_contig7216.15194.1|Name=mRNA_H-paniculata_contig7216.15194.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1182bp|location=Sequence derived from alignment at H-paniculata_contig7216:7120..8077+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |