mRNA_H-paniculata_contig7195.15171.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig7195.15171.1
Unique NamemRNA_H-paniculata_contig7195.15171.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig7195.15171.1 vs. uniprot
Match: D8LE97_ECTSI (Cell division cycle 123 homolog (S. cerevisiae) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE97_ECTSI)

HSP 1 Score: 402 bits (1033), Expect = 3.400e-133
Identity = 205/299 (68.56%), Postives = 229/299 (76.59%), Query Frame = 1 
Query:    1 QDAAWVNGGTLKCSLPGDVLCLMKSSTFISHDLNHAFDTCTDAGISRPDTFTLVLRKWCNLHPSMLFRCFVRGRRLVGVCQRDCTSYYAFLEEEAGRLSGALEDFFAAEVCKKFPDPDCVADVYVDSRSRVWLLDINPFAVVTDSLLFDWSEDTLTAPLPPQPE-----EEELPPGVFLRLHFEPTPV---QPHVEADGVKTEQSGPRSTRETGESNASSVACGA---GMGCNVVGSSD-MDFEFRCVPSSLHIVPDPMGRYRGPADVEMGTLMGGTGG--GTDLEELIEACRLAATSD 855
            +DAAWVNGG+LKC LPGDVLCL+KSSTFISHDLNHAFD CT + ISRP+TFTLVLRKWCNLHPSMLFRCFVR RRLVGVCQRDCTSYY FLEEEA RLS  LE+FFAAEVCKKF DPDCVADVYVD+RSRVWLLD+NPF+ VTDSLLFDWSED+L APLPP+P      EE LPPGV +R+HF+P+     Q      G    +S   S  + G     + A G      G  + G  +  DFEFRCVPSSLH+VPDPMGRYRGPADV MGTL  GTGG  G +LE+LIE+CRLA   D
Sbjct:  147 KDAAWVNGGSLKCKLPGDVLCLIKSSTFISHDLNHAFDACTGSSISRPETFTLVLRKWCNLHPSMLFRCFVRERRLVGVCQRDCTSYYGFLEEEADRLSTLLEEFFAAEVCKKFADPDCVADVYVDNRSRVWLLDMNPFSGVTDSLLFDWSEDSLAAPLPPRPPTLDRGEETLPPGVAMRIHFDPSSTHGDQASSTPSGTVAARSNDPSDSQQGPPGGRTRATGVLERATGITLAGGGEGRDFEFRCVPSSLHMVPDPMGRYRGPADVGMGTLACGTGGNGGLELEDLIESCRLAEKDD 445
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BLAST of mRNA_H-paniculata_contig7195.15171.1 vs. uniprot
Match: A0A397F342_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397F342_9STRA)

HSP 1 Score: 155 bits (391), Expect = 5.170e-40
Identity = 78/157 (49.68%), Postives = 102/157 (64.97%), Query Frame = 1 
Query:    1 QDAAWVNGGTLKCSLPGDVLCLMKSSTFISHDLNHAFDTCTDAGISR-PDTFTLVLRKWCNLHPSMLFRCFVRGRRLVGVCQRDCTSYYAFLEEEAGR--LSGALEDFFAAEVC--KKFPDPDCVADVYVDSRSRVWLLDINPFAVVTDSLLFDWSE 456
            +DA W+   +L C    D+L L+K+S FI+HDL  A+D C+D G  R PDTF LVL+KWC+L  SM FRCFVR ++L+G+ QR+CT  Y FL  EA +  L  A+  FF + +   +  PDP+ V DVYVD   +V L+DIN F  VTD LLF W E
Sbjct:   76 KDAKWILANSLCCRSFADILMLLKASDFITHDLTQAYDGCSDVGTKRRPDTFHLVLKKWCHLFDSMHFRCFVRAKKLLGISQRNCTERYDFLASEATQDTLCDAIAAFFESHLTTSQALPDPNYVFDVYVDKDHKVHLIDINVFGAVTDPLLFSWDE 232
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BLAST of mRNA_H-paniculata_contig7195.15171.1 vs. uniprot
Match: A0A4Z1PEZ3_9PEZI (Cell division cycle protein 123 n=1 Tax=Venturia nashicola TaxID=86259 RepID=A0A4Z1PEZ3_9PEZI)

HSP 1 Score: 159 bits (401), Expect = 8.340e-40
Identity = 90/212 (42.45%), Postives = 122/212 (57.55%), Query Frame = 1 
Query:    1 QDAAWVNGG-TLKCSLPGDVLCLMKSSTFISHDLNHAFDTCTDAGISRPDTFTLVLRKWCNLHPSMLFRCFVRGRRLVGVCQRDCTSYYAFLEEEAGRLSGALEDFFAAEVCKKFPDPDCVADVYVDS-RSRVWLLDINPFAVVTDSLLFDWSEDTLTAPLPPQPEEEELPPG-VFLRLHFEPTPVQPHVEADGVKTEQSGPRSTRETGESN 627
            +DA W+N G +++C  PGDV  L+KSS F++HDL HAFD C D G +    + L LRK   L+PS+ FRCFVR R ++G+CQRD  +++ FL E   +L   ++DFF   +   FPDPD   DVY+     RVWL+D+NP+A+ TD LLF W E  LT P P     +   P  V L++  E          D    E + P   RE GES+
Sbjct:  157 KDATWINAGNSMECRSPGDVYLLLKSSDFVTHDLGHAFDDCVDDGTTPEIYYHLALRKTVQLNPSLEFRCFVRNREILGICQRD-QNHFEFLFEMQDKLRERIQDFFQKRLKHTFPDPDFAFDVYIPPPHERVWLIDVNPWALRTDPLLFSWLE-LLTMPGPSTTSSQTREPEKVRLQIRKE----------DHAPAESNSPVQEREDGESS 356
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BLAST of mRNA_H-paniculata_contig7195.15171.1 vs. uniprot
Match: A0A8H7BMH3_9FUNG (Cell division cycle protein 123 n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BMH3_9FUNG)

HSP 1 Score: 156 bits (394), Expect = 2.150e-39
Identity = 82/154 (53.25%), Postives = 104/154 (67.53%), Query Frame = 1 
Query:    1 QDAAWVNGG-TLKCSLPGDVLCLMKSSTFISHDLNHAFDTCTDAGISRPDTFTLVLRKWCNLHPSMLFRCFVRGRRLVGVCQRDCTSYYAFLEEEAGRLSGALEDFFAAEVCKKFPDPDCVADVYVD-SRSRVWLLDINPFAVVTDSLLFDWSE 456
            +DAAW++   TLKC+ P DV  L+KSS FI+HDLNHA D C D+   RP +F LVLRKW +L PSM FRCFV+ + L+G+CQRD  +YY FL+     L   + +FF   V   F     V DVYV  +R RVWL+D NPF+V TDSLL+DW+E
Sbjct:  138 RDAAWISATQTLKCTSPFDVFLLLKSSDFINHDLNHALDHC-DSPSPRP-SFELVLRKWYDLQPSMEFRCFVKQKELIGICQRD-VNYYEFLQGMKNDLELKIHNFFEDHVRDNFDSAHYVFDVYVPRNRQRVWLVDFNPFSVTTDSLLYDWAE 288
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BLAST of mRNA_H-paniculata_contig7195.15171.1 vs. uniprot
Match: W4G630_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G630_9STRA)

HSP 1 Score: 155 bits (391), Expect = 3.250e-39
Identity = 78/157 (49.68%), Postives = 102/157 (64.97%), Query Frame = 1 
Query:    1 QDAAWVNGGTLKCSLPGDVLCLMKSSTFISHDLNHAFDTCTDAGISR-PDTFTLVLRKWCNLHPSMLFRCFVRGRRLVGVCQRDCTSYYAFLEEEAGR--LSGALEDFFAAEVC--KKFPDPDCVADVYVDSRSRVWLLDINPFAVVTDSLLFDWSE 456
            +DA W+   +L C    D+L L+K+S FI+HDL  A+D C+D G  R PDTF LVL+KWC+L  SM FRCFVR ++L+G+ QR+CT  Y FL  EA +  L  A+  FF + +   +  PDP+ V DVYVD   +V L+DIN F  VTD LLF W E
Sbjct:  104 KDAKWILANSLCCRSFADILMLLKASDFITHDLTQAYDGCSDVGTKRRPDTFHLVLKKWCHLFDSMHFRCFVRAKKLLGISQRNCTERYDFLASEATQDTLCDAIAAFFESHLTTSQALPDPNYVFDVYVDKDHKVHLIDINVFGAVTDPLLFSWDE 260
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BLAST of mRNA_H-paniculata_contig7195.15171.1 vs. uniprot
Match: A0A517LML6_9PEZI (Cell division cycle protein 123 n=1 Tax=Venturia effusa TaxID=50376 RepID=A0A517LML6_9PEZI)

HSP 1 Score: 157 bits (397), Expect = 3.560e-39
Identity = 77/169 (45.56%), Postives = 108/169 (63.91%), Query Frame = 1 
Query:    1 QDAAWVNGG-TLKCSLPGDVLCLMKSSTFISHDLNHAFDTCTDAGISRPDTFTLVLRKWCNLHPSMLFRCFVRGRRLVGVCQRDCTSYYAFLEEEAGRLSGALEDFFAAEVCKKFPDPDCVADVYVDS-RSRVWLLDINPFAVVTDSLLFDWSEDTLTAPLPPQPEEEE 501
            +DA W+N G +++C  PGD+  L+KSS F++HDL+HAFD C + G S    + L LRK   L+PS+ FRCFVR R ++G+CQRD  +++ FL +   +L   ++DFF   +   FPDP    DVY+     RVWL+D+NP+A+ TD LLF W E  LT P P  P  +E
Sbjct:  162 KDATWINAGNSMECRNPGDIYLLLKSSDFVTHDLDHAFDDCVEDGTSPQIEYHLALRKTVQLNPSLEFRCFVRDREILGICQRD-QNHFEFLFKMQDKLRERIQDFFTRRLKHTFPDPSFAFDVYIPPPHERVWLIDVNPWAIRTDPLLFSWLE-LLTMPGPSSPTSQE 328
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BLAST of mRNA_H-paniculata_contig7195.15171.1 vs. uniprot
Match: A0A485KSJ1_9STRA (Aste57867_11016 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KSJ1_9STRA)

HSP 1 Score: 154 bits (389), Expect = 3.800e-39
Identity = 76/159 (47.80%), Postives = 103/159 (64.78%), Query Frame = 1 
Query:    1 QDAAWVNGGTLKCSLPGDVLCLMKSSTFISHDLNHAFDTCTDAGI---SRPDTFTLVLRKWCNLHPSMLFRCFVRGRRLVGVCQRDCTSYYAFLEEEAGR--LSGALEDFFAAEVCK--KFPDPDCVADVYVDSRSRVWLLDINPFAVVTDSLLFDWSE 456
            +DA W+ G +L+C    D++ L+KSS FISHDL   ++ C D      SRP+TF LVL+KWCN + SM FRCFV    +VG+ QR+CT +Y FL+ E+ +  L  A+E FF        +F DP+ + DVY+D  +RV+LLDIN F  VTD LLF+W E
Sbjct:   85 RDAKWMLGNSLRCRTFEDIVVLLKSSDFISHDLTEVYEGCVDKADHVKSRPETFHLVLKKWCNFYDSMHFRCFVVDGSIVGISQRNCTEFYDFLQNESTQENLCNAIESFFKKNFKSDYEFSDPNFIFDVYIDKNNRVFLLDINVFGCVTDGLLFNWEE 243
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BLAST of mRNA_H-paniculata_contig7195.15171.1 vs. uniprot
Match: A0A3R7G6D1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G6D1_9STRA)

HSP 1 Score: 154 bits (388), Expect = 4.900e-39
Identity = 82/174 (47.13%), Postives = 108/174 (62.07%), Query Frame = 1 
Query:    1 QDAAWVNGGTLKCSLPGDVLCLMKSSTFISHDLNHAFDTCTDAGISR-PDTFTLVLRKWCNLHPSMLFRCFVRGRRLVGVCQRDCTSYYAFLEEEAGRLSGALEDFFA-----AEVCKKFPDPDCVADVYVDSRSRVWLLDINPFAVVTDSLLFDWSEDT-LTAPLPPQPEEEE 501
            +DAAW+ G +LKC+   D+  L++SS F+ HD+   +  C+DA + + P    LVL+KWCN H SMLFRCFV G RLV V QR C  +Y FL ++   L   L DF+      +E C  FPDP+   DVYVD R RV+LLDIN F  VT++LLF W E   L +P P   EE++
Sbjct:   79 RDAAWMLG-SLKCTTFDDLFLLLQSSDFVVHDVTQPYIGCSDAEVDKQPSESYLVLKKWCNFHDSMLFRCFVIGHRLVAVSQRSCDEFYEFLPDQQDELCELLYDFYRDNFRNSEGCFVFPDPNYSFDVYVDKRRRVYLLDINVFGAVTNTLLFSWQELLELQSPSPATVEEDD 251
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BLAST of mRNA_H-paniculata_contig7195.15171.1 vs. uniprot
Match: A0A2G4T7X9_RHIZD (Cell division cycle protein 123 n=2 Tax=Rhizopus TaxID=4842 RepID=A0A2G4T7X9_RHIZD)

HSP 1 Score: 154 bits (389), Expect = 5.570e-39
Identity = 76/154 (49.35%), Postives = 103/154 (66.88%), Query Frame = 1 
Query:    1 QDAAWV-NGGTLKCSLPGDVLCLMKSSTFISHDLNHAFDTCTDAGISRPDTFTLVLRKWCNLHPSMLFRCFVRGRRLVGVCQRDCTSYYAFLEEEAGRLSGALEDFFAAEVCKKFPDPDCVADVYVD-SRSRVWLLDINPFAVVTDSLLFDWSE 456
            +DAAW+    TLKC+ P DV  L+KSS FI+HDLNHA++ C D    RP TF LVLRKW +L PSM FRCFV+ + ++G+CQRD  +YY FL +    +   +  FF   VC+ F   + V DVYV+ +R +V+L+D NPF   TDS+++DW E
Sbjct:  109 RDAAWIATTQTLKCTSPFDVFLLLKSSDFINHDLNHAYEICADQKQDRP-TFDLVLRKWFDLQPSMEFRCFVKNQEIIGICQRD-VNYYEFLPKMKPTIELLIYRFFEEHVCEHFDSLNYVFDVYVEYNREKVYLVDFNPFCPTTDSIMYDWEE 260
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BLAST of mRNA_H-paniculata_contig7195.15171.1 vs. uniprot
Match: A0A1Y1I2V1_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I2V1_KLENI)

HSP 1 Score: 156 bits (395), Expect = 6.930e-39
Identity = 75/153 (49.02%), Postives = 97/153 (63.40%), Query Frame = 1 
Query:    1 QDAAWVN-GGTLKCSLPGDVLCLMKSSTFISHDLNHAFDTCTDAGISRPDTFTLVLRKWCNLHPSMLFRCFVRGRRLVGVCQRDCTSYYAFLEEEAGRLSGALEDFFAAEVCKKFPDPDCVADVYVDSRSRVWLLDINPFAVVTDSLLFDWSE 456
            +D AWV+  G++KC    +VL L+KSS  + HDL HAFD C D G++RP+ F LVL+KW  L P M FRCFV+G +L G+CQR+ TS+Y  + E    L   +E F    V   FPDPD V DVYV S  RV ++D NP+   T  LLF WS+
Sbjct:  131 KDTAWVSPSGSVKCDNGAEVLLLLKSSDIVVHDLCHAFDNCRDGGLTRPEHFVLVLKKWHPLRPEMEFRCFVKGNQLRGICQREVTSFYPSILESRKELGPVIETFIQDHVLGHFPDPDFVCDVYVTSDRRVKIMDFNPYGGGTLPLLFSWSD 283
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7195.15171.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE97_ECTSI3.400e-13368.56Cell division cycle 123 homolog (S. cerevisiae) n=... [more]
A0A397F342_9STRA5.170e-4049.68Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A4Z1PEZ3_9PEZI8.340e-4042.45Cell division cycle protein 123 n=1 Tax=Venturia n... [more]
A0A8H7BMH3_9FUNG2.150e-3953.25Cell division cycle protein 123 n=1 Tax=Apophysomy... [more]
W4G630_9STRA3.250e-3949.68Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A517LML6_9PEZI3.560e-3945.56Cell division cycle protein 123 n=1 Tax=Venturia e... [more]
A0A485KSJ1_9STRA3.800e-3947.80Aste57867_11016 protein n=1 Tax=Aphanomyces stella... [more]
A0A3R7G6D1_9STRA4.900e-3947.13Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]
A0A2G4T7X9_RHIZD5.570e-3949.35Cell division cycle protein 123 n=2 Tax=Rhizopus T... [more]
A0A1Y1I2V1_KLENI6.930e-3949.02Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7195contigH-paniculata_contig7195:7979..11135 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score360.9
Seed ortholog evalue5e-97
Seed eggNOG ortholog2880.D8LE97
Preferred nameCDC123
KEGG rclassRC00004,RC00037,RC02816
KEGG koko:K08765
KEGG ReactionR01923
KEGG Pathwayko00071,ko01212,ko03320,ko04152,ko04714,ko04920,ko04922,ko04931,map00071,map01212,map03320,map04152,map04714,map04920,map04922,map04931
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000287,GO:0001732,GO:0002181,GO:0002183,GO:0003674,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006518,GO:0006807,GO:0007049,GO:0007050,GO:0008144,GO:0008150,GO:0008152,GO:0008284,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016043,GO:0017076,GO:0019222,GO:0019538,GO:0022402,GO:0022607,GO:0022613,GO:0022618,GO:0030554,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032553,GO:0032555,GO:0032559,GO:0034248,GO:0034250,GO:0034622,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0042127,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0045727,GO:0045786,GO:0045948,GO:0046872,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051726,GO:0060255,GO:0065003,GO:0065007,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1905143,GO:2000112
EggNOG free text desc.eukaryotic translation initiation factor 2 complex assembly
EggNOG OGsKOG2983@1,KOG2983@2759
EC2.3.1.21
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03029
Exons4
Model size1519
Cds size792
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7195.15171.1prot_H-paniculata_contig7195.15171.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig7195 8640..11069 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930874.0164313-UTR-H-paniculata_contig7195:7978..86391622930874.0164313-UTR-H-paniculata_contig7195:7978..8639Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7195 7979..8639 -
1691481491.1220708-UTR-H-paniculata_contig7195:7978..86391691481491.1220708-UTR-H-paniculata_contig7195:7978..8639Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7195 7979..8639 -
1622930874.1279564-UTR-H-paniculata_contig7195:11069..111351622930874.1279564-UTR-H-paniculata_contig7195:11069..11135Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7195 11070..11135 -
1691481491.1736786-UTR-H-paniculata_contig7195:11069..111351691481491.1736786-UTR-H-paniculata_contig7195:11069..11135Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7195 11070..11135 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930874.0318582-CDS-H-paniculata_contig7195:8639..91421622930874.0318582-CDS-H-paniculata_contig7195:8639..9142Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7195 8640..9142 -
1691481491.1345854-CDS-H-paniculata_contig7195:8639..91421691481491.1345854-CDS-H-paniculata_contig7195:8639..9142Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7195 8640..9142 -
1622930874.054063-CDS-H-paniculata_contig7195:9522..96451622930874.054063-CDS-H-paniculata_contig7195:9522..9645Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7195 9523..9645 -
1691481491.1433554-CDS-H-paniculata_contig7195:9522..96451691481491.1433554-CDS-H-paniculata_contig7195:9522..9645Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7195 9523..9645 -
1622930874.0802555-CDS-H-paniculata_contig7195:10565..106901622930874.0802555-CDS-H-paniculata_contig7195:10565..10690Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7195 10566..10690 -
1691481491.1523554-CDS-H-paniculata_contig7195:10565..106901691481491.1523554-CDS-H-paniculata_contig7195:10565..10690Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7195 10566..10690 -
1622930874.1059258-CDS-H-paniculata_contig7195:11028..110691622930874.1059258-CDS-H-paniculata_contig7195:11028..11069Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7195 11029..11069 -
1691481491.161003-CDS-H-paniculata_contig7195:11028..110691691481491.161003-CDS-H-paniculata_contig7195:11028..11069Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7195 11029..11069 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig7195.15171.1

>prot_H-paniculata_contig7195.15171.1 ID=prot_H-paniculata_contig7195.15171.1|Name=mRNA_H-paniculata_contig7195.15171.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=264bp
MKSSTFISHDLNHAFDTCTDAGISRPDTFTLVLRKWCNLHPSMLFRCFVR
GRRLVGVCQRDCTSYYAFLEEEAGRLSGALEDFFAAEVCKKFPDPDCVAD
VYVDSRSRVWLLDINPFAVVTDSLLFDWSEDTLTAPLPPQPEEEELPPGV
FLRLHFEPTPVQPHVEADGVKTEQSGPRSTRETGESNASSVACGAGMGCN
VVGSSDMDFEFRCVPSSLHIVPDPMGRYRGPADVEMGTLMGGTGGGTDLE
ELIEACRLAATSD*
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mRNA from alignment at H-paniculata_contig7195:7979..11135-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig7195.15171.1 ID=mRNA_H-paniculata_contig7195.15171.1|Name=mRNA_H-paniculata_contig7195.15171.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3157bp|location=Sequence derived from alignment at H-paniculata_contig7195:7979..11135- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGATGCGGCGTGGGTGAACGGGGGCACGTTGAAATGCTCGTTGCCGGG
AGACGTGCTATGTCTCATGAAGAGTTCCACCTTCATCTCCCACGATCTCA
ACCACGCGTAAGTACGGGAAATTAAATTGCATTGTTGTACAACGTCAGGT
GTATCCGCAGGCATGACTGTTTTTTTCGTTCTTCACCGCGCTGGGCATTG
TGCTGAAGATGTTTTCGTATGAAGCTTCTGTTGTATGCTATTTTGTCGTG
AATAACGGGCTGATATGAACGCGTTCGTATCATGTCATTATGTGGCATGT
TTGCAACTGTAGTAGCCGTTTCTTATTTCGCCGCGTCATGATGCCATGGT
GCCATTACTATCCTTTCGCGCTTGATAATAATGAGGTTCCGAAGCGTTTT
TTACCCACTTGATATTTTATTTTGTCTATTTTGTGTTTTTGGAAGGTTCG
ATACGTGCACCGATGCCGGTATCTCTCGACCGGACACGTTCACGTTGGTC
CTGCGCAAGTGGTGTAACCTCCACCCGTCCATGCTCTTCCGGTGCTTCGT
CAGGGGACGGCGATTAGTCGGTACGTTATGTTCTATTTTTTTGTTTGGAG
CTACCTGTCGACCAGCAGGACTTTTCTGTAGCCACCACTCATGTCATGAT
ACTAGAGTGTTGGTTGTGCTGATGAGTACACGCACGTGGCTATGAGATAC
AAGCTACGCATCCTCCATTCATGTACACGTACTGTAGAAAGTATATGCAG
GAGGTCATCACGGTATCGTCAATACTAGCAATTCACCAGCATAGTGGTCA
GTATGGATGCCTTGATCCAGTACGTCGAACTGAATCGAAGTTGTAAAGGG
AGAAGGACGCACATGGGGAGCGAGTCTCCCATATGTTCAAACCTAATTCT
AATCAAGTCTATAATACTCAATTTTATCATGAATCGGGGAGTTCACTGCT
ACTGGTAATGTGTTTACTGTGACGACCTTTGGAATATATAGAATATACTT
CCACGAGGCATGTGGACCCTTTGTTACTTGCGTCTCTTCATTTCCTGCAG
CCAATGCAGTACGTGATCTATGCGACCCCCGCCCCCGCCCCCCATCGCAA
ATACAGTTCTGGGTTTGGATTGTCCACGAATAGCTGAGTAACTGGCCAAA
AAACGTGAGAAAATCTACGGTCTCTTCAAAATTGTGCTTTATAAAAAAAT
GCAGACGTGTTTTGTCACATTTGTTTACGTCCTTAACCCTGGTCCATATT
CCGGAAGGGATGCTTAAAGGGACCAAATAGTACTTATCGGGATGTTGTTA
GGACACAGTGAGGCGTAGCTTCGAAGATGTATAGTTCAAAATATCCGCTC
GCGTGGGTTGCGTGTAAATAGCAAATGTGTAGCAGGTTGGCCCAGGGCTA
CACGATTCTGTTCCGCAAGGGGCGCTTCGTAAATCATGTCGTTTTACTGC
GCATGATATCTCGTCTCATCTGCTGCCGTTGGCTGCTTAGGTGTTTGCCA
ACGGGACTGCACGAGCTACTACGCCTTCTTGGAGGAGGAAGCAGGCCGCT
TGTCTGGTGCGCTGGAGGATTTCTTTGCTGCCGAAGTCTGCAAAAAATTC
CCGGATCCAGACTGTGAGCCTCAGCATGTTTCCGGAAGCGGGTTCATAAG
CTCTGTCATCATCCAATTTGCCGGTTTGCCTGAGTTAAACCTTGCCTCTT
CATGTACGAAAAGTGTGGGGTTGTGGTAGCGCGCCTTTTAACTAGGTTGT
CTCATATTCACCGTCAAATTGTTTTTCGACCTCCATGGTAGTGCTGTTTT
AGAGTACATTTTACAGCCTTGGAGCTTACCATGTCCTCACGAAGAAATGG
TTCGCGAGCCGCCCTGTGTCGACAGCCCTCTGTTGTTGTGTATTCTGTAC
CATACCAGCTTGTCCACCGATGATGTCACACGTGATGATCCTGCCTCTGT
ACATGGGCGTGTGGTCTTACTCTCATCCCGATCACAAAAATAGGCGTGGC
CGATGTGTACGTGGACAGCCGATCTCGCGTGTGGCTACTGGACATCAATC
CGTTCGCAGTTGTCACGGATTCGTTGCTATTCGACTGGTCTGAAGACACG
CTTACGGCGCCTCTTCCCCCTCAACCCGAGGAAGAAGAACTTCCACCAGG
CGTATTTCTTCGGTTACATTTCGAACCGACACCTGTTCAGCCGCACGTCG
AGGCTGATGGCGTGAAAACGGAGCAGAGTGGTCCACGCTCAACAAGGGAG
ACTGGAGAAAGCAATGCGTCTAGCGTGGCGTGTGGGGCGGGCATGGGTTG
CAATGTGGTGGGAAGTTCGGACATGGACTTTGAGTTTCGATGCGTGCCTT
CTAGTTTGCACATAGTGCCGGATCCAATGGGGAGGTATAGGGGACCTGCT
GATGTCGAGATGGGCACTCTCATGGGGGGAACGGGAGGTGGAACAGATCT
TGAAGAGTTGATCGAGGCTTGCCGTCTCGCAGCTACCAGCGACTAAAGTT
GCATGGGAGGACATTGCCGAGTTAGATGAAGTTTGCTGCCGTCTTCAATT
GGTGGCCCACTGATTGGCGGAATCCCTAAAACTGTATACAAGCTGGGCCC
ACCGAAAACGTTCCACAGGCCAAATGTCATGATCCAAAGCGAAAACTACC
GCAAACATGGGACTGCCTGAAATCGTGTAAGCGCCACGGAGTGCGCCGCG
TGCTCGGATCGGCTATCCGAGCACTTTCAGCGTTTCAAAGTGCATGACGC
TACCAAATATGAACTGCTAGCGCTTATTTTCCAAACGTGTTGATACCAAA
GTCAAGTATGTTATATATGTCCCCGATTCATGTCCGAATGTTCTCAAAAT
TGGTGTACGTGTTGCTGACATCACGATGGGAACCGTAATACCAGTTTGGG
CTCCCAACTCGCCATCGTTCCAAAATTAGAGCTAAAGTAAAATTGGGGTG
TAATATCGTTTTTCTATGGGATTAGGACGTACGTAATAATTCTACAAGAG
CGGGCACTTCTCATTTTGTTTTTTGGAATTCTGAGGGTAGGTGAGCATCA
AAATTTCGTAGGCCTCCATTGATGTTACCTTTTGATTTTTTATTTTGTTC
CCAAGATAAACACAGATATTTAAACCATGAAATCATTCAAGAGCCATTAT
TTTCGGG
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Coding sequence (CDS) from alignment at H-paniculata_contig7195:7979..11135-

>mRNA_H-paniculata_contig7195.15171.1 ID=mRNA_H-paniculata_contig7195.15171.1|Name=mRNA_H-paniculata_contig7195.15171.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1584bp|location=Sequence derived from alignment at H-paniculata_contig7195:7979..11135- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGAGTTCCACCTTCATCTCCCACGATCTCAACCACGCATGAAGAGT
TCCACCTTCATCTCCCACGATCTCAACCACGCGTTCGATACGTGCACCGA
TGCCGGTATCTCTCGACCGGACACGTTCACGTTGGTCCTGCGCAAGTGGT
GTAACCTCCACCCGTCCATGCTCTTCCGGTGCTTCGTCAGGGGACGGCGA
TTAGTCGGTTCGATACGTGCACCGATGCCGGTATCTCTCGACCGGACACG
TTCACGTTGGTCCTGCGCAAGTGGTGTAACCTCCACCCGTCCATGCTCTT
CCGGTGCTTCGTCAGGGGACGGCGATTAGTCGGTGTTTGCCAACGGGACT
GCACGAGCTACTACGCCTTCTTGGAGGAGGAAGCAGGCCGCTTGTCTGGT
GCGCTGGAGGATTTCTTTGCTGCCGAAGTCTGCAAAAAATTCCCGGATCC
AGACTGTGTTTGCCAACGGGACTGCACGAGCTACTACGCCTTCTTGGAGG
AGGAAGCAGGCCGCTTGTCTGGTGCGCTGGAGGATTTCTTTGCTGCCGAA
GTCTGCAAAAAATTCCCGGATCCAGACTGCGTGGCCGATGTGTACGTGGA
CAGCCGATCTCGCGTGTGGCTACTGGACATCAATCCGTTCGCAGTTGTCA
CGGATTCGTTGCTATTCGACTGGTCTGAAGACACGCTTACGGCGCCTCTT
CCCCCTCAACCCGAGGAAGAAGAACTTCCACCAGGCGTATTTCTTCGGTT
ACATTTCGAACCGACACCTGTTCAGCCGCACGTCGAGGCTGATGGCGTGA
AAACGGAGCAGAGTGGTCCACGCTCAACAAGGGAGACTGGAGAAAGCAAT
GCGTCTAGCGTGGCGTGTGGGGCGGGCATGGGTTGCAATGTGGTGGGAAG
TTCGGACATGGACTTTGAGTTTCGATGCGTGCCTTCTAGTTTGCACATAG
TGCCGGATCCAATGGGGAGGTATAGGGGACCTGCTGATGTCGAGATGGGC
ACTCTCATGGGGGGAACGGGAGGTGGAACAGATCTTGAAGAGTTGATCGA
GGCTTGCCGTCTCGCAGCTACCAGCGACTAAGCGTGGCCGATGTGTACGT
GGACAGCCGATCTCGCGTGTGGCTACTGGACATCAATCCGTTCGCAGTTG
TCACGGATTCGTTGCTATTCGACTGGTCTGAAGACACGCTTACGGCGCCT
CTTCCCCCTCAACCCGAGGAAGAAGAACTTCCACCAGGCGTATTTCTTCG
GTTACATTTCGAACCGACACCTGTTCAGCCGCACGTCGAGGCTGATGGCG
TGAAAACGGAGCAGAGTGGTCCACGCTCAACAAGGGAGACTGGAGAAAGC
AATGCGTCTAGCGTGGCGTGTGGGGCGGGCATGGGTTGCAATGTGGTGGG
AAGTTCGGACATGGACTTTGAGTTTCGATGCGTGCCTTCTAGTTTGCACA
TAGTGCCGGATCCAATGGGGAGGTATAGGGGACCTGCTGATGTCGAGATG
GGCACTCTCATGGGGGGAACGGGAGGTGGAACAGATCTTGAAGAGTTGAT
CGAGGCTTGCCGTCTCGCAGCTACCAGCGACTAA
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