mRNA_H-paniculata_contig719.15165.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig719.15165.1 vs. uniprot
Match: D8LD19_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD19_ECTSI) HSP 1 Score: 185 bits (470), Expect = 1.970e-56 Identity = 105/182 (57.69%), Postives = 123/182 (67.58%), Query Frame = 1
Query: 7 RSGSAMRVWPINSLHIAHPSLGYAALVNASRFGTANGQGIWGKGGXXXXXXXXNDDA---------VSKLIDKYGDGMGQATFSGLLGFSSGYAMMKVGKAVAFLIGVVFITAQGLNHAGVVSVKWNRLEDKAKKYLDTNNDSKLDKEDAKNLWKRLKNILTQNLPAGGGFAGGFALGLYCG 525
R G+ RVWP + IAHPSLG A LVN +RF G G + K XXXX V+KLIDKYGD +G+ F G++GF SGYAMMKVGKA+AF+IGV FI QGLN++GVV++KW + E K K D+N D K+DKEDAK LWKRLK LT NLPAGGGF GGFALGL CG
Sbjct: 29 RFGNTRRVWPPPQVQIAHPSLGVATLVNGARFRARAGLGDFIKSAQGAGXXXXXXXXXXXXXXXXEVTKLIDKYGDRIGEVGFGGVVGFCSGYAMMKVGKAIAFVIGVGFIVVQGLNYSGVVTIKWEKAEVKVKSLFDSNKDGKVDKEDAKALWKRLKTALTHNLPAGGGFTGGFALGLCCG 210
BLAST of mRNA_H-paniculata_contig719.15165.1 vs. uniprot
Match: A0A835YSS8_9STRA (FUN14 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSS8_9STRA) HSP 1 Score: 120 bits (300), Expect = 2.390e-31 Identity = 63/123 (51.22%), Postives = 81/123 (65.85%), Query Frame = 1
Query: 169 DDAVSKLIDKYGDGMGQATFSGLLGFSSGYAMMK----VGKAVAFLIGVVFITAQGLNHAGVVSVKWNRLEDKAKKYLDTNNDSKLDKEDAKNLWKRLKNILTQNLPAGGGFAGGFALGLYCG 525
DDAV+ LID+Y D +GQ F G+LG SGYA+ K VGK AF+IG F+ AQ NH G V++ W +++DKA + +D + DKEDAK LWK+ + +L NLPAGG F GFALG Y G
Sbjct: 40 DDAVTALIDRYSDQIGQIGFGGVLGACSGYAVKKASARVGKVAAFVIGTGFVAAQLANHFGYVNISWAQVKDKAVQAIDQDGSGVFDKEDAKMLWKKARKVLKANLPAGGSFGAGFALGFYLG 162
BLAST of mRNA_H-paniculata_contig719.15165.1 vs. uniprot
Match: A0A1Z5K3X1_FISSO (EF-hand domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K3X1_FISSO) HSP 1 Score: 102 bits (255), Expect = 4.740e-25 Identity = 53/115 (46.09%), Postives = 73/115 (63.48%), Query Frame = 1
Query: 172 DAVSKLIDKYGDGMGQATFSGLLGFSSGYAMMKVGKAVAFLIGVVFITAQGLNHAGVVSVKWNRLEDKAKKYLDTNNDSKLDKEDAKNLWKRLKNILTQNLPAGGGFAGGFALGL 516
DAV IDK + +F ++G+ SG AM ++GKA AFL+G+ FI QGL H G V + W ++++ A+K +DTN + +D ED K WK LK ILT +PA GGF+ GF GL
Sbjct: 7 DAVETAIDKLKPVLSNISFGAVMGYCSGTAMKQIGKATAFLVGLGFIGLQGLAHYGYVQIDWMKVKESAQKSIDTNGNGSIDAEDWKAYWKSLKKILTNKVPAAGGFSLGFLYGL 121
BLAST of mRNA_H-paniculata_contig719.15165.1 vs. uniprot
Match: A0A7S4MP33_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MP33_9STRA) HSP 1 Score: 101 bits (251), Expect = 4.700e-24 Identity = 56/128 (43.75%), Postives = 76/128 (59.38%), Query Frame = 1
Query: 121 GIWGKGGXXXXXXXXNDDAVSKLIDKYGDGMGQATFSGLLGFSSGYAMMKVGKAVAFLIGVVFITAQGLNHAGVVSVKWNRLEDKAKKYLDTNNDSKLDKEDAKNLWKRLKNILTQNLPAGGGFAGGF 504
G+ +GG DAVSK +DK M + TF +G+ SG A KVGKAVA IG FI QG+ + G + V W +++D A K +DT++D KL +DAK W++LK ILT +P GGF+ GF
Sbjct: 21 GLVPEGGHFLPKENEASDAVSKALDKLKPAMSKLTFGAFVGYCSGVAAKKVGKAVAAAIGFGFIALQGIAYTGYIDVDWQKVKDDAVKTIDTDSDGKLTIDDAKTYWQKLKMILTNKIPDTGGFSLGF 148
BLAST of mRNA_H-paniculata_contig719.15165.1 vs. uniprot
Match: A0A7S1CUN5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CUN5_CYCTE) HSP 1 Score: 99.8 bits (247), Expect = 1.250e-23 Identity = 51/118 (43.22%), Postives = 73/118 (61.86%), Query Frame = 1
Query: 172 DAVSKLIDKYGDGMGQATFSGLLGFSSGYAMMKVGKAVAFLIGVVFITAQGLNHAGVVSVKWNRLEDKAKKYLDTNNDSKLDKEDAKNLWKRLKNILTQNLPAGGGFAGGFALGLYCG 525
DAV K + + + TF G +GF SGYA K+GKA+AF IG+ F+ QG+ G +S+ W +++D A K DT+ D +L +DAK W+RL+ +LT LP GGF+ GF G+ G
Sbjct: 24 DAVEKALATLKPALSKLTFGGFMGFCSGYASKKLGKAIAFTIGLAFLGLQGMVATGYISIDWMKVKDDAIKAADTDGDGQLTVDDAKEYWRRLRVVLTNKLPDAGGFSIGFLYGVKSG 141
BLAST of mRNA_H-paniculata_contig719.15165.1 vs. uniprot
Match: A0A7S0F743_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7S0F743_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 1.650e-23 Identity = 53/115 (46.09%), Postives = 69/115 (60.00%), Query Frame = 1
Query: 172 DAVSKLIDKYGDGMGQATFSGLLGFSSGYAMMKVGKAVAFLIGVVFITAQGLNHAGVVSVKWNRLEDKAKKYLDTNNDSKLDKEDAKNLWKRLKNILTQNLPAGGGFAGGFALGL 516
DAV IDK + + +F G++GF SGYAM KVGKAVA IG+ F Q + G + V WN++ A K LD D K+D ED K WK+LK++L LP GGF+ GF G+
Sbjct: 9 DAVEAAIDKVKPLIAKVSFGGVMGFCSGYAMKKVGKAVAVTIGLGFFGLQSAAYLGYIDVNWNKIVSDAVKPLDATGDGKVDAEDVKVYWKKLKSLLVNGLPNAGGFSVGFLYGV 123
BLAST of mRNA_H-paniculata_contig719.15165.1 vs. uniprot
Match: A0A7S1UWI7_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UWI7_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 3.380e-23 Identity = 51/118 (43.22%), Postives = 71/118 (60.17%), Query Frame = 1
Query: 172 DAVSKLIDKYGDGMGQATFSGLLGFSSGYAMMKVGKAVAFLIGVVFITAQGLNHAGVVSVKWNRLEDKAKKYLDTNNDSKLDKEDAKNLWKRLKNILTQNLPAGGGFAGGFALGLYCG 525
DAV +DK + + TF L+G+ SGYAM ++GKAVAF +GV+F+ QGL G + V W +++D A K DT D K+D ED K W++ + T LP GGF+ GF G+ G
Sbjct: 10 DAVESALDKLKPMLSKLTFGSLVGYCSGYAMKRIGKAVAFGVGVIFLGLQGLVSTGYIEVDWLKIKDDAMKSADTTGDGKVDTEDLKVYWRKFWKMATHKLPDAGGFSLGFLYGVRYG 127
BLAST of mRNA_H-paniculata_contig719.15165.1 vs. uniprot
Match: A0A7S3V6P4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V6P4_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 8.550e-23 Identity = 46/116 (39.66%), Postives = 77/116 (66.38%), Query Frame = 1
Query: 169 DDAVSKLIDKYGDGMGQATFSGLLGFSSGYAMMKVGKAVAFLIGVVFITAQGLNHAGVVSVKWNRLEDKAKKYLDTNNDSKLDKEDAKNLWKRLKNILTQNLPAGGGFAGGFALGL 516
+D +S++++K G+ TF L+G+ SG A K+GKA+A ++G+ FI Q ++G V V W++++D A +DTN D ++ +D N WK+++ ILT+N+P+ GGF+ GF GL
Sbjct: 5 EDPISQILEKVKPYAGKLTFGSLVGYCSGAAAKKIGKALAVVVGLGFIAVQSAAYSGYVDVNWDKVKDDAIAKVDTNGDGEVTLDDLNNYWKKVRTILTKNVPSAGGFSFGFMYGL 120
BLAST of mRNA_H-paniculata_contig719.15165.1 vs. uniprot
Match: A0A7S0AMD2_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AMD2_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 1.130e-22 Identity = 48/115 (41.74%), Postives = 72/115 (62.61%), Query Frame = 1
Query: 172 DAVSKLIDKYGDGMGQATFSGLLGFSSGYAMMKVGKAVAFLIGVVFITAQGLNHAGVVSVKWNRLEDKAKKYLDTNNDSKLDKEDAKNLWKRLKNILTQNLPAGGGFAGGFALGL 516
DAV+K IDK + + TF L+G+ SG A K+G+A+A + GV F+ QG ++G + V W +++D +D N D L+ EDAK W++LK +LT N+P GGF+ GF G+
Sbjct: 42 DAVTKAIDKLKPALAKITFGSLVGYCSGVATKKIGRALAIVAGVGFMIVQGAVYSGYIDVDWKKVQDDVANKVDVNKDGALNAEDAKAYWQKLKKVLTHNIPNAGGFSLGFLYGV 156
BLAST of mRNA_H-paniculata_contig719.15165.1 vs. uniprot
Match: A0A7S1Z4Q8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z4Q8_TRICV) HSP 1 Score: 95.9 bits (237), Expect = 5.560e-22 Identity = 50/115 (43.48%), Postives = 71/115 (61.74%), Query Frame = 1
Query: 172 DAVSKLIDKYGDGMGQATFSGLLGFSSGYAMMKVGKAVAFLIGVVFITAQGLNHAGVVSVKWNRLEDKAKKYLDTNNDSKLDKEDAKNLWKRLKNILTQNLPAGGGFAGGFALGL 516
DA+SK +DK M + TF +G+ SG A KVGKA+A IG+ FI QG + G V V W ++++ A +DT+ D K+ +DAK W++LK ILT +P GGF+ GF G+
Sbjct: 37 DAISKALDKMKPAMSKMTFGAFVGYCSGVAAKKVGKAIAAAIGMGFIALQGAVYTGYVEVDWKKVQNDAVTKIDTDADGKITIDDAKTYWQKLKKILTNKVPDAGGFSLGFLYGV 151 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig719.15165.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig719.15165.1 >prot_H-paniculata_contig719.15165.1 ID=prot_H-paniculata_contig719.15165.1|Name=mRNA_H-paniculata_contig719.15165.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=176bp MHRSGSAMRVWPINSLHIAHPSLGYAALVNASRFGTANGQGIWGKGGGGGback to top mRNA from alignment at H-paniculata_contig719:137..1472+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig719.15165.1 ID=mRNA_H-paniculata_contig719.15165.1|Name=mRNA_H-paniculata_contig719.15165.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1336bp|location=Sequence derived from alignment at H-paniculata_contig719:137..1472+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig719:137..1472+ >mRNA_H-paniculata_contig719.15165.1 ID=mRNA_H-paniculata_contig719.15165.1|Name=mRNA_H-paniculata_contig719.15165.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1056bp|location=Sequence derived from alignment at H-paniculata_contig719:137..1472+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |