mRNA_H-paniculata_contig7161.15137.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7161.15137.1 vs. uniprot
Match: A0A6H5L5H7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H7_9PHAE) HSP 1 Score: 372 bits (954), Expect = 2.690e-115 Identity = 205/401 (51.12%), Postives = 258/401 (64.34%), Query Frame = 1
Query: 13 EVRVALQKMNRYKAPGEDGVPVDFLRLLDYHPDQPTIMGDAVVRMINVMWKSRVIPELWTESTIVSIPTKGEMTIMGNCRRISLMSSVLKILMVIIAQRRIDTLE---------GGFRCREECIVQAGCLLEICQRRKIHTQNTFLTFVDLKKAYDTVPHEALFGKLHHYGVRGSVLGYIREVYGRSTISVRYSGGNSPPVRLNRGVRQECPLSPTLFNVLISDILDGAEQWGVGIDGTET----KFPGLLFADALVCMTPTRKKLVKMNNHLTKSMQANETQADIEKCRVMAIKGFRTERLRREAQRWQLGGEQLPIVEEYRYLGINFTRNLKVSSTTVGRLEGAKKFVGKITPFLRNTSIPVPLKASVVRSIVVPQML*GAEIYGMDKKITSRMQKCVN 1176
E+ AL ++ R+K+PG DGVP DFL L + MG V+ M+N++WK+RVIP EST+V IP KG+MT M N R ISLM++VLK+L++II+ R E GFR REEC+ QA CLLEICQRRK ++ +L FVDLKKAYDTVP EALF KL YGVRG +L +IR +Y S I+VR S L RGVRQ CPLSP LFN+ I+DILDGAE GV G + + PGLLFAD LV ++PTR KL M++H++ M NE A I KC VMAI G RLR RW+L GE LPIVE Y YLG+ F R L V +L +K V +TP+L IPVPLK +VVR +++P++L GAE++GM IT+R+Q VN
Sbjct: 504 EMVEALARIKRHKSPGNDGVPADFLELAGGEEGSQSPMGKTVLGMLNLIWKTRVIPTDRRESTVVPIPKKGDMTDMNNHRGISLMNTVLKVLVMIISTRLNSAFERHKLFSQSQAGFRTREECVTQAACLLEICQRRKFRRKSAYLMFVDLKKAYDTVPQEALFAKLVFYGVRGEMLAFIRALYANSKIAVRTGDLLSDSFSLERGVRQGCPLSPVLFNIFINDILDGAESLGVPEVGNQLERAPRIPGLLFADDLVTISPTRAKLAAMDDHISVWMAENEMSAGIHKCGVMAI-GHGRRRLRERPDRWKLAGETLPIVESYTYLGLEFNRRLDVEVMMGNKLAAGEKLVTLMTPYLLCRQIPVPLKVAVVRGVILPRLLFGAEVFGMRTSITNRLQVYVN 903
BLAST of mRNA_H-paniculata_contig7161.15137.1 vs. uniprot
Match: A0A7S1SJ55_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SJ55_9CHLO) HSP 1 Score: 259 bits (663), Expect = 2.080e-74 Identity = 146/415 (35.18%), Postives = 236/415 (56.87%), Query Frame = 1
Query: 1 VSDSEVRVALQKMNRYKAPGEDGVPVDFLRLLDYHPDQPTIMGDAVVRMINVMWKSRVIPELWTESTIVSIPTKGEMTIMGNCRRISLMSSVLKILMVIIAQRRIDTLE---------GGFRCREECIVQAGCLLEICQRRKIHTQNTFLTFVDLKKAYDTVPHEALFGKLHHYGVRGSVLGYIREVYGRSTISVRYS---GGNSPPVRLNRGVRQECPLSPTLFNVLISDILDGAEQWGVGIDGT--------ETKFPGLLFADALVCMTPTRKKLVKMNNHLTKSMQANETQADIEKCRVMAIKGFRTE--RLRREAQRWQLGGEQLPIVEEYRYLGINFTRNLKVSSTTVGRLEGAKKFVGKITPFLRNTSIPVPLKASVVRSIVVPQML*GAEIYGMDKKI-TSRMQKCVN 1176
+ E+ AL+++N KA G DG+ + L+L Y PD P G +++ ++N +W ++ +P+ W S +VSI KG++T+M N R IS+M +++K+LM ++ QR D + GGF EEC +Q + +I RR+ T+ F+DL+KAYDT+PHE LF KL G+ G +L +++ +Y ST+ V+ G S P+ + RG+RQ CP SP LFN+ I+DI DG E G + G + PG LFAD V + P+ L M H ++ + + ++KC VMA+ G ++ LR +A RWQLGGE++P+V EYRYLG +L + + R+ +++ V + L IP+ ++ SV+++ ++P + G E++GMD +R+Q +N
Sbjct: 397 IGGGELCKALKRLNNNKASGVDGITAETLKLAIYAPDSP--FGKSLLELMNNIWTTKCVPKQWCSSAVVSILKKGDVTVMDNYRGISIMGALIKLLMTVVTQRLQDVCQTNKLIRRWQGGFMPGEECPLQVASIFDIAGRRQALGLPTYAGFIDLRKAYDTIPHELLFSKLEANGITGHMLSFLKALYRDSTVQVKTGEAPGILSDPIPIERGLRQGCPASPILFNIFINDIFDGIEGLGCEVPGCVDMLDSRQPLRVPGQLFADDTVGLAPSLDNLHAMFAHFSQWAEDHYMGFGVKKCGVMAL-GRHSDVVALREQADRWQLGGERVPVVSEYRYLGALINSDLSMRNIVGDRVNKSRRAVEALDSVLGGRDIPINVRTSVLKTCILPVLTYGCEVWGMDSTSGVNRLQTILN 808
BLAST of mRNA_H-paniculata_contig7161.15137.1 vs. uniprot
Match: A0A3M2C3P5_9GAMM (Reverse transcriptase domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M2C3P5_9GAMM) HSP 1 Score: 239 bits (610), Expect = 1.380e-66 Identity = 153/407 (37.59%), Postives = 215/407 (52.83%), Query Frame = 1
Query: 13 EVRVALQKMNRYKAPGEDGVPVDFLRLL---------------DYHPDQPTIMGDAVVRMINVMWKSRVIPELWTESTIVSI-PTKGEMTIMGNCRRISLMSSVLKILMVIIAQR-----------RIDTLEGGFRCREECIVQAGCLLEICQRRKIHTQNTFLTFVDLKKAYDTVPHEALFGKLHHYGVRGSVLGYIREVYGRSTISVRYSGG---NSPPVRLNRGVRQECPLSPTLFNVLISDILDGAEQWGVGIDGT--ETKFPGLLFADALVCMTPTRKKLVKMNNHLTKSMQANETQADIEKCRVMAIKGFRTERLRREAQRWQLGGEQLPIVEEYRYLGINFTRNLKVSSTTVGRLEGAKKFVGKITPFLRNTSIPVPLKASVVRSIVVPQML*GAEIYGM 1137
EVR AL M KAPG DGV DFL+L + HP P M + +++ MW +P +W + +V I +G+ M N R ISL+ VLK+L II +R R+ + GFR REEC+ L E+ +RR+I ++L F+DLKKAYDTVPH ALF KL GVRG L +I+ +Y S++S R N P L RG+RQ CP+SP LFNV I+DI+D + GV + G T GLLFAD LV ++ KL + + +T E Q + KC +M I + +W L G+ +P+VEEY YLG +L + + R+ AKK + ++PFL SIP+ +++ V S+V P L GAE++G+
Sbjct: 682 EVRAALLSMKNGKAPGCDGVSADFLKLCCGQSLEEEDDDGDDAETHPPNP--MAAVLFKLLCAMWAQETVPSVWNMAEVVPIFKNRGDQLEMENYRGISLIPVVLKLLCTIITRRLASMIDDQINPRLHKEQAGFRSREECLGHIVALYEVLRRRQIMQLPSYLAFIDLKKAYDTVPHGALFHKLEKIGVRGKCLRFIQNLYRHSSVSFRAPSDCCRNISPAPLRRGLRQGCPMSPLLFNVFINDIIDEIRELGVHVPGLPRSTTLGGLLFADDLVLLSDHPDKLQQSLDAITHWADKWEMQFGVSKCAIMGIDMPISHLSSLREDQWTLQGQPVPLVEEYVYLGTLLHNSLDMKESIRYRVGRAKKALQSVSPFLSCRSIPLHIRSRVFMSMVCPVALYGAELWGL 1086
BLAST of mRNA_H-paniculata_contig7161.15137.1 vs. uniprot
Match: L7JX89_TRAHO (RNA-directed DNA polymerase, Non LTR Retrotransposon (Fragment) n=1 Tax=Trachipleistophora hominis TaxID=72359 RepID=L7JX89_TRAHO) HSP 1 Score: 233 bits (594), Expect = 1.590e-65 Identity = 139/397 (35.01%), Postives = 215/397 (54.16%), Query Frame = 1
Query: 13 EVRVALQKMNRYKAPGEDGVPVDFLRLLDYHPDQPTIMGDAVVRMINVMWKSRVIPELWTESTIVSIPTKGEMTIMGNCRRISLMSSVLKILMVIIAQR--RIDTL-------EGGFRCREECIVQAGCLLEICQRRKIHTQNTFLTFVDLKKAYDTVPHEALFGKLHHYGVRGSVLGYIREVYGRSTISVRYSGGNSPPVRLNRGVRQECPLSPTLFNVLISDILDGAEQWGVGIDGTETKFPGLLFADALVCMTPTRKKLVKMNNHLTKSMQANETQADIEKCRVMAIKGFRTERLRREAQRWQLGGEQLPIVEEYRYLGINFTRNLKVSSTTVGRLEGAKKFVGKITPFLRNTSIPVPLKASVVRSIVVPQML*GAEIYGMDKKITSRMQKCVN 1176
EV AL+ ++ KA G DG+P++F ++L ++ + G+ V ++I ++ +PE W E+ IV +P KG++ M N R ISL++++ K ++ II ++ RI T + GFR EECI Q C EI +RR + + T F+D KKAYD VPHE LF KL YG G +L ++ E+Y SVR S GV+Q CP SPTLFN+ I++IL+G GVGI G + PGLLFAD V + +V L + +I KC +M E + + +P VE YRYLGI RNL + + R E A++ + I P + IP+P++ ++++S+++P G+E+YGM + T+ +Q+ ++
Sbjct: 215 EVLRALEHSSKGKATGTDGIPIEFYKVLQRDKNRESPFGNFVFQLITEIYAQAKVPEQWNEAMIVPVPKKGDLHNMDNYRGISLINTLCKEVVKIITEKLNRICTTNKILRDEQAGFRKLEECIAQTTCFYEIVKRRSLKGKPTMALFLDFKKAYDKVPHEGLFAKLRGYGFSGRILDFLIELYRNPKASVRIGDERSDTFNYQMGVKQGCPASPTLFNLYINNILEGIT--GVGI-GNGEQVPGLLFADDAVVFAESYDDMVHNMEILEDWCDKWKMDLNISKCGLMVFNS-------NEQRAIKYKNANIPTVERYRYLGIPINRNLDLKTVINDRKEKAQQALMIIRPLISRIEIPLPIRVTLIKSVLIPTATFGSELYGMSSQRTAPIQRVID 601
BLAST of mRNA_H-paniculata_contig7161.15137.1 vs. uniprot
Match: A0A1R1Y7R2_9FUNG (Putative RNA-directed DNA polymerase from transposon BS n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1Y7R2_9FUNG) HSP 1 Score: 221 bits (562), Expect = 2.010e-60 Identity = 135/398 (33.92%), Postives = 210/398 (52.76%), Query Frame = 1
Query: 1 VSDSEVRVALQKMNRYKAPGEDGVPVDFLRLLDYHPDQPTIMGDAVVRMINVMWKSRVIPELWTESTIVSIPTKGEMTIMGNCRRISLMSSVLKILMVIIAQR--RIDTL-------EGGFRCREECIVQAGCLLEICQRRKIHTQNTFLTFVDLKKAYDTVPHEALFGKLHHYGVRGSVLGYIREVYGRSTISVRYSGGNSPPVRLNRGVRQECPLSPTLFNVLISDILDGAEQWGVGIDGTETKFPGLLFADALVCMTPTRKKLVKMNNHLTKSMQANETQADIEKCRVMAIKGFRTERLRREAQRWQLGGEQLPIVEEYRYLGINFTRNLKVSSTTVGRLEGAKKFVGKITPFLRNTSIPVPLKASVVRSIVVPQML*GAEIYGMDKKITSRMQK 1167
+S +E+ AL+ K+PG DG+P + +++ Y + + + ++R+I +W + IP+ S ++ IP KG++ N R ISL+ ++ K+L IIA+R +ID + GFR REEC+ QA L E+ +RRKI +T++ F+D KAYD VPHEAL K+ G+ G + I +Y + VR S V N GVRQ CP SP LF++ I+D+LDG + GV I G E PGLLFAD V + + +L LT Q E Q + +KC +M I + + G+ + V+EY+YLG+ F S E +K + FL +P ++A+++R++++P + G EI+GM S +QK
Sbjct: 393 LSWAEICAALKSTPNNKSPGSDGIPSEVWKMVQYEDEPTSPLAKLILRLITGIWDAEKIPKQLDPSVVIPIPKKGDIRDPNNYRGISLIPTLSKVLSKIIARRLCKIDNKYSILAKEQAGFRTREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHEALLRKIKTAGIGGKLYRVIEALYRSPKMCVRVGDRLSKTVDYNCGVRQGCPASPMLFDIYINDLLDGIK--GVKIPGIEECIPGLLFADDAVVLAESPAELQIALEKLTAWSQKWEMQINQDKCGIMGINSS-------TGMLFTIMGKPITQVKEYKYLGVVFNNKWNNLSALQNNKENERKAFQSMYYFLSRKDVPTAMRAALIRTVLIPILCYGCEIFGMSAVRCSTLQK 781
BLAST of mRNA_H-paniculata_contig7161.15137.1 vs. uniprot
Match: A0A1R1YJD8_9FUNG (LINE-1 retrotransposable element ORF2 protein n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YJD8_9FUNG) HSP 1 Score: 220 bits (561), Expect = 4.090e-60 Identity = 138/398 (34.67%), Postives = 206/398 (51.76%), Query Frame = 1
Query: 10 SEVRVALQKMNRYKAPGEDGVPVDFLRLLDYHPDQPTIMGDAVVRMINVMWKSRVIPELWTESTIVSIPTKGEMTIMGNCRRISLMSSVLKILMVIIAQR------RIDTL---EGGFRCREECIVQAGCLLEICQRRKIHTQNTFLTFVDLKKAYDTVPHEALFGKLHHYGVRGSVLGYIREVYGRSTISVRYSGGNSPPVRLNRGVRQECPLSPTLFNVLISDILDGAEQWGVGIDGTETKFPGLLFADALVCMTPTRKKLVKMNNHLTKSMQANETQADIEKCRVMAIKGFRTERLRREAQRWQLGGEQLPIVEEYRYLGINFTRNLKVSSTTVGRLEGAKKFVGKITPFLRNTSIPVPLKASVVRSIVVPQML*GAEIYGMDKKITSRMQKCVN 1176
+E+ AL+ K+PG DG+P + + + + + + + + R+I +W + IPE S +V IP KG+M N R ISL+ ++ K++ IIA+R + D L + GFR REEC+ QA L E+ +RRKI +T++ F+D KAYD VPHEAL K+ G+ G V I +Y + VR G S V N GVRQ CP SP LF++ I+D+LDG + GV + G E PGLLFAD V + + +L L+ E Q + EKC VM I G + + G+ + V EY+YLG+ F S E +K + FL IP ++ S++R++++P + G EI+GM + +QK N
Sbjct: 770 AEICDALKSTPNKKSPGYDGIPSEAWKTVQHEIEPTSPLAKVLFRLIKEIWDNESIPEQLDPSVVVPIPKKGDMREPNNYRGISLIPTLSKVVSKIIARRLCKIENKYDILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHEALLKKIRACGIGGKVYRIIEALYRSPKMCVRIGGQLSKLVEYNCGVRQGCPASPILFDIYINDLLDGIK--GVKVPGVEEVIPGLLFADDAVVLAESPAELQIALEKLSAWSNKWEMQINQEKCGVMGING-------NTGMLFTVMGKPINQVTEYKYLGVLFNDKWNNLSALKNNRENGRKAFHSMYYFLTKKDIPTAMRVSLIRTVLIPILCYGGEIFGMSTTRSGTLQKVAN 1158
BLAST of mRNA_H-paniculata_contig7161.15137.1 vs. uniprot
Match: A0A1R1YAQ4_9FUNG (RNA-directed DNA polymerase from mobile element jockey (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YAQ4_9FUNG) HSP 1 Score: 214 bits (544), Expect = 5.720e-58 Identity = 131/398 (32.91%), Postives = 209/398 (52.51%), Query Frame = 1
Query: 1 VSDSEVRVALQKMNRYKAPGEDGVPVDFLRLLDYHPDQPTIMGDAVVRMINVMWKSRVIPELWTESTIVSIPTKGEMTIMGNCRRISLMSSVLKILMVIIAQR--RIDTL-------EGGFRCREECIVQAGCLLEICQRRKIHTQNTFLTFVDLKKAYDTVPHEALFGKLHHYGVRGSVLGYIREVYGRSTISVRYSGGNSPPVRLNRGVRQECPLSPTLFNVLISDILDGAEQWGVGIDGTETKFPGLLFADALVCMTPTRKKLVKMNNHLTKSMQANETQADIEKCRVMAIKGFRTERLRREAQRWQLGGEQLPIVEEYRYLGINFTRNLKVSSTTVGRLEGAKKFVGKITPFLRNTSIPVPLKASVVRSIVVPQML*GAEIYGMDKKITSRMQK 1167
+S +E+R AL+ K+PG DG+P + +L+ + + ++R+IN +W + IP+ S +V IP KG+M N R ISL+ ++ K++ II++R +ID + GFR REEC+ QA L E+ +RRKI +T++ F+D KAYD VPH+AL K+ + G+RG + I +Y + VR S V N GVRQ CP SP LF++ I+D+L G + GV I G +T+ GLLFAD V + + +L L+ E + + EKC +M I + + G+ + V EY+YLG+ F S + +K + FL IP ++ +++R++++P + G EI+GM + +QK
Sbjct: 455 LSWTEIRAALKSTPNNKSPGSDGIPSEAWKLVQDEDEPTSPFAKLLLRLINGIWDAEKIPKQLDPSVVVPIPKKGDMRESNNYRGISLIPTLSKVVSKIISRRLCKIDNKYNILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKNSGIRGKLYRMIEALYRSPKMCVRVGDRLSKIVEYNCGVRQGCPASPLLFDIFINDLLGGIK--GVKIPGIDTEIAGLLFADDAVVLADSPAELQIALEKLSAWSHKWEMKINQEKCGIMGINSS-------TGMLFTVMGKHIEQVTEYKYLGVVFNNKWNNLSALKSNRKNGRKAFHSMYYFLSRKDIPTAMRVALIRTVLIPILCYGGEIFGMSATRSGTLQK 843
BLAST of mRNA_H-paniculata_contig7161.15137.1 vs. uniprot
Match: A0A1R1XKG1_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1XKG1_9FUNG) HSP 1 Score: 214 bits (545), Expect = 6.190e-58 Identity = 134/397 (33.75%), Postives = 210/397 (52.90%), Query Frame = 1
Query: 13 EVRVALQKMNRYKAPGEDGVPVDFLRLLDYHPDQPTIMGDAVVRMINVMWKSRVIPELWTESTIVSIPTKGEMTIMGNCRRISLMSSVLKILMVIIAQR------RIDTL---EGGFRCREECIVQAGCLLEICQRRKIHTQNTFLTFVDLKKAYDTVPHEALFGKLHHYGVRGSVLGYIREVYGRSTISVRYSGGNSPPVRLNRGVRQECPLSPTLFNVLISDILDGAEQWGVGIDGTETKFPGLLFADALVCMTPTRKKLVKMNNHLTKSMQANETQADIEKCRVMAIKGFRTERLRREAQRWQLGGEQLPIVEEYRYLGINFTRNLKVSSTTVGRLEGAKKFVGKITPFLRNTSIPVPLKASVVRSIVVPQML*GAEIYGMDKKITSRMQKCVN 1176
++R A++ KAPG DG+P + +L+ + + + +V ++ MW S IPE++ S IV IP KG+ N R ISL+ +++KIL I+AQ+ + + L + GFR REEC+ QA L E+ +RRKI T++ F+D KAYD VPHEAL KL + G + I +Y I VR S +RGVRQ CP SP LF++ I+DIL+ + G+ I K GLLFAD V + +L +++ + E Q + KC V+ I G T+ + + + +P V+EY+YLG+ F S E A + + + FL N P+ ++A+++RS+++P G EI+GM + +++QK V+
Sbjct: 902 DIRRAIKVTPNNKAPGIDGIPSELWKLVQEEKNPESYLSKLLVELLLKMWNSAHIPEIFNTSIIVPIPKKGDPRDTNNYRGISLIPTLVKILAKIVAQKLNELDFKYNLLVKEQAGFRSREECVSQATVLYEVVRRRKIKGIPTWIGFIDFAKAYDRVPHEALLSKLKSQKIGGQLHRVISALYKSPRICVRVGNSISRKFEYSRGVRQGCPASPMLFDLFINDILENIK--GINIPTINKKIKGLLFADDAVVFADSPSELQIAFERVSEWAEKWEMQVNASKCGVIGI-GQSTKMI------FMMQNGIVPQVKEYKYLGVMFNDKWNHVSAIKNNAEAASRAISGMYYFLENNKTPIAIRATLIRSVIIPIATYGGEIFGMSQSRINKLQKVVD 1289
BLAST of mRNA_H-paniculata_contig7161.15137.1 vs. uniprot
Match: A0A1R1YP44_9FUNG (LINE-1 retrotransposable element ORF2 protein (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YP44_9FUNG) HSP 1 Score: 214 bits (544), Expect = 8.890e-58 Identity = 133/395 (33.67%), Postives = 203/395 (51.39%), Query Frame = 1
Query: 10 SEVRVALQKMNRYKAPGEDGVPVDFLRLLDYHPDQPTIMGDAVVRMINVMWKSRVIPELWTESTIVSIPTKGEMTIMGNCRRISLMSSVLKILMVIIAQR--RIDTL-------EGGFRCREECIVQAGCLLEICQRRKIHTQNTFLTFVDLKKAYDTVPHEALFGKLHHYGVRGSVLGYIREVYGRSTISVRYSGGNSPPVRLNRGVRQECPLSPTLFNVLISDILDGAEQWGVGIDGTETKFPGLLFADALVCMTPTRKKLVKMNNHLTKSMQANETQADIEKCRVMAIKGFRTERLRREAQRWQLGGEQLPIVEEYRYLGINFTRNLKVSSTTVGRLEGAKKFVGKITPFLRNTSIPVPLKASVVRSIVVPQML*GAEIYGMDKKITSRMQK 1167
+E+ AL+ K+PG DG+P + +L+ + + +++N +W+ IP+ S IV IP KG+M N R ISL+ ++ K+L IIA+R +ID + GFR REEC+ QA L E+ +RRKI +T++ F+D KAYD VPH+AL K+ G+ G + I +Y + VR S V N GVRQ CP SP LF++ I+D+LDG + GV + G +T+ PGLLFAD V + + +L LT E Q + EKC +M I + + G+ + V EY+YLG+ F S + +K + FL IP ++ ++VR++++P + G EI+GM +QK
Sbjct: 1082 TEICAALKSTPNNKSPGSDGIPSEVWKLVQNEEEPTSPFAKLFSKLVNKIWEDEKIPQKLDPSVIVPIPKKGDMRDPNNYRGISLIPTLSKVLSKIIARRLSKIDNKHDILVKEQAGFRSREECVAQATALYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKSSGIGGKLYRMIEALYRSPKMCVRVGDRLSKIVEYNCGVRQGCPASPLLFDIFINDLLDGIK--GVKVPGIDTEIPGLLFADDAVVLAESPAELQIALEKLTVWSLKWEMQINQEKCGIMGINSS-------TGMLFTIMGKPIKQVAEYKYLGVVFNDKWNNLSALKNNRDNGRKAFHSMYYFLSRRDIPTAMRIALVRTVLMPILCYGGEIFGMSATRAGALQK 1467
BLAST of mRNA_H-paniculata_contig7161.15137.1 vs. uniprot
Match: A0A1R1X4V9_9FUNG (Putative RNA-directed DNA polymerase from transposon BS n=2 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X4V9_9FUNG) HSP 1 Score: 213 bits (541), Expect = 1.600e-57 Identity = 136/398 (34.17%), Postives = 203/398 (51.01%), Query Frame = 1
Query: 1 VSDSEVRVALQKMNRYKAPGEDGVPVDFLRLLDYHPDQPTIMGDAVVRMINVMWKSRVIPELWTESTIVSIPTKGEMTIMGNCRRISLMSSVLKILMVIIAQR------RIDTL---EGGFRCREECIVQAGCLLEICQRRKIHTQNTFLTFVDLKKAYDTVPHEALFGKLHHYGVRGSVLGYIREVYGRSTISVRYSGGNSPPVRLNRGVRQECPLSPTLFNVLISDILDGAEQWGVGIDGTETKFPGLLFADALVCMTPTRKKLVKMNNHLTKSMQANETQADIEKCRVMAIKGFRTERLRREAQRWQLGGEQLPIVEEYRYLGINFTRNLKVSSTTVGRLEGAKKFVGKITPFLRNTSIPVPLKASVVRSIVVPQML*GAEIYGMDKKITSRMQK 1167
+S E+ AL+ K+PG DG+P + + + + + + + R+I +W + IPE S +V IP KG+M N R ISL+ ++ K++ II +R + D L + GFR REEC+ QA L E+ +RRKI +T++ F+D KAYD VPHEAL K+ G+ G V I +Y + VR G S V N GVRQ CP SP LF++ I+D+LDG + GV I G + PGLLFAD V + + +L LT E Q + EKC VM I + + G+ + V +Y+YLG+ F S E +K + FL IP ++A+++R++++P + G EI+GM +QK
Sbjct: 433 LSWDEICAALKSTPNKKSPGYDGIPSEAWKTVQHEIEPTSPFAKVLFRLIKEIWDTESIPEQLDASVVVPIPKKGDMREPNNYRGISLIPTLSKVVSKIIVRRLGKIDNKYDILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHEALLKKIRAGGIGGKVHRIIEALYRSPKMCVRIGGQLSKLVEYNCGVRQGCPASPILFDIYINDLLDGIK--GVKIPGIDKGIPGLLFADDAVVLAESPAELQIALEKLTAWSLKWEMQINQEKCGVMGINSS-------TGMLFTIMGKTIAQVSDYKYLGVVFNDKWNHLSALQNNRENGRKAFHSMYYFLSRKDIPTAMRAALIRTVLIPILCYGGEIFGMSALRCGTLQK 821 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7161.15137.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7161.15137.1 >prot_H-paniculata_contig7161.15137.1 ID=prot_H-paniculata_contig7161.15137.1|Name=mRNA_H-paniculata_contig7161.15137.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=360bp MNRYKAPGEDGVPVDFLRLLDYHPDQPTIMGDAVVRMINVMWKSRVIPELback to top mRNA from alignment at H-paniculata_contig7161:10390..11565- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7161.15137.1 ID=mRNA_H-paniculata_contig7161.15137.1|Name=mRNA_H-paniculata_contig7161.15137.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1176bp|location=Sequence derived from alignment at H-paniculata_contig7161:10390..11565- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7161:10390..11565- >mRNA_H-paniculata_contig7161.15137.1 ID=mRNA_H-paniculata_contig7161.15137.1|Name=mRNA_H-paniculata_contig7161.15137.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2160bp|location=Sequence derived from alignment at H-paniculata_contig7161:10390..11565- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |