mRNA_H-paniculata_contig7129.15102.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7129.15102.1 vs. uniprot
Match: A0A6H5JH17_9PHAE (Clu domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JH17_9PHAE) HSP 1 Score: 149 bits (375), Expect = 9.850e-39 Identity = 80/137 (58.39%), Postives = 93/137 (67.88%), Query Frame = 1
Query: 31 LEALTQTGLWTSLTAEVAARFRHDLSIWGKHLEDSKVYPARARPCVADRAHKLPLLRRVCQRLGFRVLSRPYEFNTAEPFALEDVVNVAPVVKSCLPSCPVAEAVEALDLAQFNLGSGGSLQTAHDLAHHAANMLLQ 441
L ALT GLW S+ AEV RFRH L IWG P+ A A+R HKLPLLRRV QRLG RVLS+ Y T EPFALED+ V+PVVKSC+P+ P +A EAL++AQ +L SG LQ AHD AHHAA +LLQ
Sbjct: 1047 LVALTPDGLWQSVCAEVFFRFRHRLVIWGA--------PSNAEN--AERRHKLPLLRRVSQRLGVRVLSKTYRLETKEPFALEDIAGVSPVVKSCVPASPAPDAAEALEMAQLHLTSGSGLQMAHDFAHHAATLLLQ 1173
BLAST of mRNA_H-paniculata_contig7129.15102.1 vs. uniprot
Match: A0A662WVJ9_9STRA (Clu domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WVJ9_9STRA) HSP 1 Score: 101 bits (252), Expect = 3.490e-22 Identity = 53/132 (40.15%), Postives = 83/132 (62.88%), Query Frame = 1
Query: 55 LWTSLTAEVAARFRHDLSIWGKHLEDSKVYPARARPCVADRAHKLPLLRRVCQRLGFRVLSRPYEFNT--AEPFALEDVVNVAPVVKSCLPSCPVAEAVEALDLAQFNLGSGGSLQTAHDLAHHAANMLLQV 444
LWT L E+ +RF + LS+WG ++S+ R HK+ LLRR+CQRLG RV+SR Y+F+ A P +L+D+ V PVVK+ LP+ P+ +A + L+ + +L S G+L +A++ A+++L QV
Sbjct: 958 LWTRLDKEIKSRFDYTLSLWGPGGQESRSAHEEGAAAPLGRVHKIVLLRRLCQRLGLRVVSRNYDFSASCASPISLDDITGVVPVVKNSLPAHPLTQAKQLLERGRVHL-SQGALSSAYEFLQEASSLLFQV 1088
BLAST of mRNA_H-paniculata_contig7129.15102.1 vs. uniprot
Match: W2RHW6_PHYPN (Clustered mitochondria protein homolog n=13 Tax=Phytophthora TaxID=4783 RepID=W2RHW6_PHYPN) HSP 1 Score: 101 bits (252), Expect = 3.510e-22 Identity = 55/136 (40.44%), Postives = 89/136 (65.44%), Query Frame = 1
Query: 37 ALTQTGLWTSLTAEVAARFRHDLSIWGKHLEDSKVYPARARPCVADRAHKLPLLRRVCQRLGFRVLSRPYEFNTAEPFALEDVVNVAPVVKSCLPSCPVAEAVEALDLAQFNLGSGGSLQTAHDLAHHAANMLLQV 444
+L LWT + E+ ARF + L++WG ++S+ A A P A R +K +LRR+CQRLG RV+SR YEF+++ P +L+D+ V PVVK+ LP+ P+A+A + L+ + +L S G+L A++ ++++L QV
Sbjct: 930 SLDANTLWTRIDKEIKARFDYKLTLWGPGRDESRGEDA-AFP--AGRVNKSVMLRRLCQRLGLRVVSRNYEFSSSSPISLDDITGVVPVVKTSLPAHPLAQAKQLLERGRMHL-SQGALSNAYEFLQESSSLLFQV 1061
BLAST of mRNA_H-paniculata_contig7129.15102.1 vs. uniprot
Match: K3X426_GLOUD (eIF3_p135 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X426_GLOUD) HSP 1 Score: 100 bits (249), Expect = 7.360e-22 Identity = 56/138 (40.58%), Postives = 82/138 (59.42%), Query Frame = 1
Query: 34 EALTQTGLWTSLTAEVAARFRHDLSIWGKHLE-DSKVYPARARPCVADRAHKLPLLRRVCQRLGFRVLSRPYEFNTAEPFALEDVVNVAPVVKSCLPSCPVAEAVEALDLAQFNLGSGGSLQTAHDLAHHAANMLLQV 444
E L +W L E+ +RF + L++W + + DS P R HK LLRR+CQR G RV+SR Y+F++ EPF ++D+ V PVVK LP+ P+A A + L+ + +L SGGSL TA++L + +L QV
Sbjct: 193 ETLDAKTIWQRLEKEIQSRFDYTLTLWNREEDVDSTEVPL-------GRVHKTVLLRRLCQRNGLRVVSRNYDFSSREPFQIDDITGVVPVVKHSLPAHPLAHAKQLLERGRLHL-SGGSLATAYELLQETSALLFQV 322
BLAST of mRNA_H-paniculata_contig7129.15102.1 vs. uniprot
Match: A0A1V9ZE05_9STRA (Eukaryotic translation initiation factor 3 subunit n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZE05_9STRA) HSP 1 Score: 100 bits (248), Expect = 1.210e-21 Identity = 59/143 (41.26%), Postives = 82/143 (57.34%), Query Frame = 1
Query: 28 ALEALTQTGLWTSLTAEVAARFRHDLSIW----GKHLEDSKVYPARARPCVADRAHKLPLLRRVCQRLGFRVLSRPYEFNTAEPFALEDVVNVAPVVKSCLPSCPVAEAVEALDLAQFNLGSGGSLQTAHDLAHHAANMLLQV 444
A+ L T LW +TA+VA RF + L W K +D+K P RA HKLPLLRRVCQRLG++V SR Y+F+ PF+ +DV V V KS LP+ +A ++ +F L S G L A+++ A+++L QV
Sbjct: 849 AIPDLDATSLWAKITADVAVRFGYTLRFWPVKKAKKAKDAKEVPVRA--------HKLPLLRRVCQRLGWQVASRDYDFSREAPFSADDVTGVVAVAKSSLPAHAFVQAATLIERGRFLL-SQGVLAPAYEMLQDASSLLYQV 982
BLAST of mRNA_H-paniculata_contig7129.15102.1 vs. uniprot
Match: A0A421GZL0_9STRA (Clu domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GZL0_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 1.650e-21 Identity = 49/132 (37.12%), Postives = 83/132 (62.88%), Query Frame = 1
Query: 55 LWTSLTAEVAARFRHDLSIWGKHLEDSKVYPARARPCVADRAHKLPLLRRVCQRLGFRVLSRPYEFNT--AEPFALEDVVNVAPVVKSCLPSCPVAEAVEALDLAQFNLGSGGSLQTAHDLAHHAANMLLQV 444
LW + E+ RF ++L++WG + + A + R HK LLRR+CQRLG RV+SR Y+F++ A P +L+D+ + P+VK+ LP+ P+ +A + L+ + NL S G+L +A++L +++L+QV
Sbjct: 930 LWARIDKEIKCRFDYELTLWGSGRSEPRAELAESAIVPLGRVHKAVLLRRLCQRLGLRVVSRNYDFSSSCAAPISLDDITGIVPIVKNSLPAHPLTQAKQLLERGRLNL-SQGALSSAYELLQETSSLLIQV 1060
BLAST of mRNA_H-paniculata_contig7129.15102.1 vs. uniprot
Match: A0A662YDJ2_9STRA (Clu domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YDJ2_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 2.970e-21 Identity = 51/132 (38.64%), Postives = 82/132 (62.12%), Query Frame = 1
Query: 55 LWTSLTAEVAARFRHDLSIWGKHLEDSKVYPARARPCVADRAHKLPLLRRVCQRLGFRVLSRPYEFNTA--EPFALEDVVNVAPVVKSCLPSCPVAEAVEALDLAQFNLGSGGSLQTAHDLAHHAANMLLQV 444
LWT L E+ +RF + LS+WG ++ + R HK+ LLRR+CQRLG RV+SR Y+F+ + P +L+D+ V PVVK+ LP+ P+ +A + L+ + +L S G+L +A++ A+++L QV
Sbjct: 679 LWTRLDKEIKSRFDYTLSLWGPGGQELRAAHEEGAAAPLGRVHKIVLLRRLCQRLGLRVVSRNYDFSASCTSPISLDDITGVVPVVKNSLPAHPLTQAKQLLERGRVHL-SQGALSSAYEFLQEASSLLFQV 809
BLAST of mRNA_H-paniculata_contig7129.15102.1 vs. uniprot
Match: D0P366_PHYIT (Clustered mitochondria protein homolog n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0P366_PHYIT) HSP 1 Score: 97.4 bits (241), Expect = 1.060e-20 Identity = 52/136 (38.24%), Postives = 85/136 (62.50%), Query Frame = 1
Query: 37 ALTQTGLWTSLTAEVAARFRHDLSIWGKHLEDSKVYPARARPCVADRAHKLPLLRRVCQRLGFRVLSRPYEFNTAEPFALEDVVNVAPVVKSCLPSCPVAEAVEALDLAQFNLGSGGSLQTAHDLAHHAANMLLQV 444
+L LWT + E+ ARF + L++WG ++S+ A + R K +LRR+CQRLG RV+SR YEF+++ P +L+D+ V PVVK+ LP+ P+ A + L+ + +L S G+L +A++ A+++L QV
Sbjct: 915 SLDSKTLWTRIDMEIKARFDYKLTLWGPGRDESRGENA---VYLVGRVSKSVMLRRLCQRLGLRVVSRNYEFSSSSPISLDDISGVVPVVKTSLPAHPLTRAKQLLERGRMHL-SQGALSSAYEFLQEASSLLFQV 1046
BLAST of mRNA_H-paniculata_contig7129.15102.1 vs. uniprot
Match: A0A067CWV9_SAPPC (Clu domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CWV9_SAPPC) HSP 1 Score: 96.3 bits (238), Expect = 2.660e-20 Identity = 56/140 (40.00%), Postives = 77/140 (55.00%), Query Frame = 1
Query: 25 DALEALTQTGLWTSLTAEVAARFRHDLSIWGKHLEDSKVYPARARPCVADRAHKLPLLRRVCQRLGFRVLSRPYEFNTAEPFALEDVVNVAPVVKSCLPSCPVAEAVEALDLAQFNLGSGGSLQTAHDLAHHAANMLLQV 444
DA+ L T LW LTA+V RF + L W K + RAHK PLLRRVCQRLG++V SR Y F+ PFA +DV V PVVK+ P+ +A ++ ++ L S G L A+++ A+++L QV
Sbjct: 781 DAIPDLDATSLWARLTADVQTRFGYTLRFWPA-ASPKKAKKGKKEAPELVRAHKTPLLRRVCQRLGWQVASRQYNFDAEYPFAADDVTGVVPVVKTSAPAHAFVQAASLIERGRYLL-SQGVLAPAYEMLQDASSLLYQV 918
BLAST of mRNA_H-paniculata_contig7129.15102.1 vs. uniprot
Match: H3GWU1_PHYRM (Clustered mitochondria protein homolog n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GWU1_PHYRM) HSP 1 Score: 95.9 bits (237), Expect = 3.660e-20 Identity = 55/144 (38.19%), Postives = 85/144 (59.03%), Query Frame = 1
Query: 37 ALTQTGLWTSLTAEVAARFRHDLSIWGKHLEDSKVYPARARPCVAD------RAHKLPLLRRVCQRLGFRVLSRPYEFNT--AEPFALEDVVNVAPVVKSCLPSCPVAEAVEALDLAQFNLGSGGSLQTAHDLAHHAANMLLQV 444
+L LW+ + E+ ARF + L++WG P R D RAH++ LLRR+CQRLG RV+SR Y+F++ A P +L+D+ V PVVK LP+ P A+A + L+ + +LG G +L +A++ A+++L QV
Sbjct: 920 SLDANTLWSRIDKEIKARFDYKLALWG---------PGRGEASADDATFPVGRAHRIVLLRRLCQRLGLRVVSRNYDFSSSCATPISLDDITGVVPVVKHSLPAHPFAQAKQLLERGRQHLGQG-ALSSAYEFLQEASSLLFQV 1053 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7129.15102.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7129.15102.1 >prot_H-paniculata_contig7129.15102.1 ID=prot_H-paniculata_contig7129.15102.1|Name=mRNA_H-paniculata_contig7129.15102.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=148bp MTRASRERDALEALTQTGLWTSLTAEVAARFRHDLSIWGKHLEDSKVYPAback to top mRNA from alignment at H-paniculata_contig7129:906..2595- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7129.15102.1 ID=mRNA_H-paniculata_contig7129.15102.1|Name=mRNA_H-paniculata_contig7129.15102.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1690bp|location=Sequence derived from alignment at H-paniculata_contig7129:906..2595- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7129:906..2595- >mRNA_H-paniculata_contig7129.15102.1 ID=mRNA_H-paniculata_contig7129.15102.1|Name=mRNA_H-paniculata_contig7129.15102.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=888bp|location=Sequence derived from alignment at H-paniculata_contig7129:906..2595- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |