mRNA_H-paniculata_contig7120.15095.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig7120.15095.1
Unique NamemRNA_H-paniculata_contig7120.15095.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig7120.15095.1 vs. uniprot
Match: A0A6H5L186_9PHAE (Fe2OG dioxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L186_9PHAE)

HSP 1 Score: 318 bits (815), Expect = 1.180e-105
Identity = 159/215 (73.95%), Postives = 179/215 (83.26%), Query Frame = 1 
Query:    1 PAAQETMNAFYSGATIVAERLLEGIASNLGLPPAHFAPSFEPHTSYLRLNYYPPCPEPCDSFSVHRHSDAGAITVLLQEHGTTALQVNHHYTGRWVSIPPVKGALTINVGDMLQVWSNDLFRAPEHRVLSQTDHDRFSAPFFYNPAYHADIAPLPWVAAKGGDEKRRTGLGTTGLELQGPARYRTVNWGEFRLKRFAGDYADQGTEEVQISHYKL 645
            P+ +ET++ FYS A +VA+RLLEGIAS+LGLP AHFAPSFEPHTSYLRLNYYP CPEP  + SV+RH+DAGA+TVLLQE+GTTALQVNH  T RWVSIPPV GA+TINVGDMLQVW+NDLF APEHRVLSQ D DRFSAPFFYNPAYHADIAPLP    +  D++     G  G   QG  RYR VNWGEFRL+RFAGDYA+QG EEVQISHY+L
Sbjct:  174 PSFKETIDEFYSSAALVAQRLLEGIASHLGLPRAHFAPSFEPHTSYLRLNYYPQCPEP-STLSVNRHTDAGALTVLLQENGTTALQVNHQGTERWVSIPPVDGAMTINVGDMLQVWTNDLFVAPEHRVLSQKDRDRFSAPFFYNPAYHADIAPLPIEGERKADDQATAAGGLAG---QGKGRYRPVNWGEFRLRRFAGDYANQG-EEVQISHYRL 383
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BLAST of mRNA_H-paniculata_contig7120.15095.1 vs. uniprot
Match: A0A836CKJ2_9STRA (Dioxygenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKJ2_9STRA)

HSP 1 Score: 233 bits (594), Expect = 2.930e-72
Identity = 116/215 (53.95%), Postives = 147/215 (68.37%), Query Frame = 1 
Query:    1 PAAQETMNAFYSGATIVAERLLEGIASNLGLPPAHFAPSFEPHTSYLRLNYYPPCPEPCDSFSVHRHSDAGAITVLLQEHGTTALQVNHHYTGRWVSIPPVKGALTINVGDMLQVWSNDLFRAPEHRVLSQTDHDRFSAPFFYNPAYHADIAPLPWVAAKGGDEKRRTGLGTTGLELQGPARYRTVNWGEFRLKRFAGDYADQGTEEVQISHYKL 645
            P  Q  M  +Y     +A R++  IA +L LP  HFA  F PHTS+LRLN+YP CP P + F+V+RH+DAGA+TVLLQ++G T+LQVNH  +GRWV I PV+GA TINVGDMLQVWSNDL++APEHRVL+ +  DR SAPFFYNP+Y A + PL              GL       Q    YR +NWGE+R +RF GDYA+ G EEVQI+H+++
Sbjct:  172 PHFQRVMLRYYHALAQLAARIMAAIALSLNLPRDHFALDFTPHTSFLRLNHYPQCPRPREHFAVNRHTDAGALTVLLQQYGITSLQVNHGGSGRWVGIEPVEGAFTINVGDMLQVWSNDLYKAPEHRVLANSQRDRMSAPFFYNPSYAATVKPL--------------GLCLGPQACQVDPHYRPINWGEYRRRRFEGDYANVG-EEVQIAHFRV 371
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BLAST of mRNA_H-paniculata_contig7120.15095.1 vs. uniprot
Match: A0A0U9HJD0_KLENI (2-oxoacid-dependent dioxygenase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HJD0_KLENI)

HSP 1 Score: 191 bits (484), Expect = 4.620e-56
Identity = 99/215 (46.05%), Postives = 131/215 (60.93%), Query Frame = 1 
Query:    1 PAAQETMNAFYSGATIVAERLLEGIASNLGLPPAHFAPSFEPHTSYLRLNYYPPCPEPCDSFSVHRHSDAGAITVLLQEHGTTALQVNHHYTGRWVSIPPVKGALTINVGDMLQVWSNDLFRAPEHRVLSQTDHDRFSAPFFYNPAYHADIAPLPWVAAKGGDEKRRTGLGTTGLELQGPARYRTVNWGEFRLKRFAGDYADQGTEEVQISHYKL 645
            P  + TM  ++S    +   +L GI+++LGLPP  F P +  H+S++RLNYY PCP P  +  V+RH DAGA+T++ Q+     LQV     G WV I P + A  IN+GDM+QVWSN  +++P HRV+      RFS PFFYNPAY  D+AP+P + + G                Q PA YR +NWG+FR KR  GDYAD G EEVQI+HY L
Sbjct:  164 PGFRATMENWFSAMERLGRDVLHGISASLGLPPTEFDPHYANHSSFVRLNYYRPCPNPALTLGVNRHYDAGALTIVGQDGEVGGLQVQKG--GEWVGIEPRRDAFVINIGDMMQVWSNGKYKSPLHRVVVNESRARFSVPFFYNPAYSTDVAPVPQLLSAG----------------QQPA-YRPINWGDFRSKRAKGDYADFG-EEVQIAHYAL 358
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BLAST of mRNA_H-paniculata_contig7120.15095.1 vs. uniprot
Match: A0A2D4BIM9_PYTIN (Fe2OG dioxygenase domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BIM9_PYTIN)

HSP 1 Score: 188 bits (478), Expect = 3.470e-55
Identity = 105/225 (46.67%), Postives = 129/225 (57.33%), Query Frame = 1 
Query:    1 PAAQETMNAFYSGATIVAERLLEGIASNLGLPPAHF----------APSFEPHTSYLRLNYYPPCPEPCDSFSVHRHSDAGAITVLLQEHGTTALQVNHHYTGRWVSIPPVKGALTINVGDMLQVWSNDLFRAPEHRVLSQTDHDRFSAPFFYNPAYHADIAPLPWVAAKGGDEKRRTGLGTTGLELQGPARYRTVNWGEFRLKRFAGDYADQGTEEVQISHYKL 645
            P  +  M  ++     +++RL+   +  LG PP +             S   ++S+LRLNYYP  PEP  S  VH H+DAGA+TVLLQ+    +LQV H  T  W  IPP  G   IN+GDMLQVWSND F AP HRVL+    +RFSAPFFYNP+Y A I P+P VAA G D  R              A+Y    W +FRLKRF GDYAD G EEV I+HY L
Sbjct:  148 PGFRAAMRDYFDRMEHISQRLIMAFSLALGKPPTYLDKYFTTTDSTGTSLRANSSFLRLNYYPVSPEPEKSMGVHHHTDAGAVTVLLQDDDVASLQVLHRATQEWHLIPPRPGTFVINIGDMLQVWSNDRFIAPLHRVLANGRSERFSAPFFYNPSYDAVIEPVPTVAADG-DPTR--------------AKYEPFGWFDFRLKRFQGDYADHG-EEVXIAHYHL 356
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BLAST of mRNA_H-paniculata_contig7120.15095.1 vs. uniprot
Match: A0A7S2S5H2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5H2_9STRA)

HSP 1 Score: 188 bits (478), Expect = 6.240e-55
Identity = 97/210 (46.19%), Postives = 133/210 (63.33%), Query Frame = 1 
Query:    1 PAAQETMNAFYSGATIVAERLLEGIASNLGLPPAHFAPSFEPHTSYLRLNYYPPCPEP-CDSFSVHRHSDAGAITVLLQEHGTTALQV-----NHHYTGRWVSIPPVKGALTINVGDMLQVWSNDLFRAPEHRVLSQTDHDRFSAPFFYNPAYHADIAPLPWVAAKGGDEKRRTGLGTTGLELQGPARYRTVNWGEFRLKRFAGDYADQG 612
            P  +  M  ++    ++A+ L++ IAS+LG+    F  SF PHTS+LRLNYYP  PEP   +  + RH+DAGAIT+LLQ+   ++L+V       H  G+WV + PV+GA+TIN+GDMLQVW+N  F APEHRV +   H+RFSAPFF+NP+Y A +AP+  V  KG  +                 RYR + WG FR +RFAGD+AD+G
Sbjct:  187 PEFEPAMMQYFHACEVLAQTLMQAIASSLGVEETTFTSSFTPHTSFLRLNYYPVNPEPEPGTLGISRHTDAGAITLLLQD-SVSSLEVYSGSKEDHADGQWVPVRPVRGAITINIGDMLQVWTNGKFTAPEHRVRTNPKHERFSAPFFFNPSYEAVVAPVEDVVGKGKAK-----------------RYRDIQWGHFRSQRFAGDFADKG 378
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BLAST of mRNA_H-paniculata_contig7120.15095.1 vs. uniprot
Match: A0A8J5XZK3_DIALT (Fe2OG dioxygenase domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XZK3_DIALT)

HSP 1 Score: 187 bits (476), Expect = 1.070e-54
Identity = 96/215 (44.65%), Postives = 128/215 (59.53%), Query Frame = 1 
Query:    1 PAAQETMNAFYSGATIVAERLLEGIASNLGLPPAHFAPSFEPHTSYLRLNYYPPCPEPCDSFSVHRHSDAGAITVLLQEHGTTALQVNHHYTGRWVSIPPVKGALTINVGDMLQVWSNDLFRAPEHRVLSQTDHDRFSAPFFYNPAYHADIAPLPWVAAKGGDEKRRTGLGTTGLELQGPARYRTVNWGEFRLKRFAGDYADQGTEEVQISHYKL 645
            P  + T  A+++ A  VA  L   +A  LG+PP HF   F  H+SYLRLNYYPPCPEP     +  H+DAGA+TVL Q     +LQV     G W  +PPV G   IN GD++QVWSN L+RAP HRV++Q   +R+SAP+F NP+Y  + AP+P                        PA+YR ++WG FR+ RFAGD+AD G +E QIS +++
Sbjct:  179 PLFEPTCRAYFAAAHDVAMVLARAMAQGLGMPPDHFDREFARHSSYLRLNYYPPCPEPNAHRCISPHTDAGALTVLTQSE-VRSLQVE--LDGEWFDVPPVPGTFVINTGDVMQVWSNGLYRAPLHRVIAQRTLERYSAPYFLNPSYETEYAPIPSTVTP-----------------DRPAKYRPISWGAFRMSRFAGDFADVG-QETQISDFEI 372
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BLAST of mRNA_H-paniculata_contig7120.15095.1 vs. uniprot
Match: A0A7S1HWL8_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1HWL8_9EUGL)

HSP 1 Score: 186 bits (473), Expect = 1.500e-54
Identity = 106/215 (49.30%), Postives = 126/215 (58.60%), Query Frame = 1 
Query:    1 PAAQETMNAFYSGATIVAERLLEGIASNLGLPPAHFAPSFEPHTSYLRLNYYPPCPEPCDSFSVHRHSDAGAITVLLQEHGTTALQVNHHYTGRWVSIPPVKGALTINVGDMLQVWSNDLFRAPEHRVLSQTDHDRFSAPFFYNPAYHADIAPLPWVAAKGGDEKRRTGLGTTGLELQGPARYRTVNWGEFRLKRFAGDYADQGTEEVQISHYKL 645
            P  +E M A+Y+    V+  L + IA  L      F P FE HTS+LRLNYYP CP+P +   ++ H DAG +TVLLQ+    +LQV H     WV++ P   A  IN+GDM QV SND F AP HRVLS T  +RFS PFFYNP Y AD  PLP                      +G A+YR VNWGEFR KRFAGDYAD G E VQI+HY L
Sbjct:  158 PKFKEQMQAYYAEMEKVSIALCQAIAMALDCEKTAFDPLFESHTSFLRLNYYPTCPDP-NILGINPHKDAGFLTVLLQD-SVASLQVFHQ--DHWVTVQPDPEAFIINIGDMCQVCSNDQFVAPLHRVLSNTAEERFSLPFFYNPGYEADATPLP---------------------SRGKAKYRPVNWGEFRKKRFAGDYADHGVE-VQITHYLL 346
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BLAST of mRNA_H-paniculata_contig7120.15095.1 vs. uniprot
Match: W2PKB3_PHYPN (Fe2OG dioxygenase domain-containing protein n=15 Tax=Phytophthora TaxID=4783 RepID=W2PKB3_PHYPN)

HSP 1 Score: 184 bits (467), Expect = 1.220e-53
Identity = 99/216 (45.83%), Postives = 132/216 (61.11%), Query Frame = 1 
Query:    1 PAAQETMNAFYSGATIVAERLLEGIASNLGLPPAHFAPSFE-PHTSYLRLNYYPPCPEPCDSFSVHRHSDAGAITVLLQEHGTTALQVNHHYTGRWVSIPPVKGALTINVGDMLQVWSNDLFRAPEHRVLSQTDHDRFSAPFFYNPAYHADIAPLPWVAAKGGDEKRRTGLGTTGLELQGPARYRTVNWGEFRLKRFAGDYADQGTEEVQISHYKL 645
            P  ++ M  +Y+    ++ RLL+  A  LG  PA F   F   ++S+LRLN+YP  PEP  +  V+RH+DAGA+TVLLQ+    +LQV H  +  W  +PP KG  TIN+GDM+QVWSND F AP HRVL+    DRFS+PFFYNP+Y A + P   +  K G+E                A YR ++W EFRL RF GDYAD G +E+QI  +K+
Sbjct:  143 PGFRQEMVEYYNKMEYISRRLLKVFAVALGEEPAFFDQFFHGDNSSFLRLNHYPVAPEPEKTMGVYRHTDAGALTVLLQDDNVASLQVFHRDSQTWTLVPPRKGTYTINIGDMVQVWSNDKFVAPLHRVLASGGADRFSSPFFYNPSYKAQVKP---IVVKEGEE----------------ANYRPLSWREFRLARFQGDYADSG-KEIQIGDFKI 338
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BLAST of mRNA_H-paniculata_contig7120.15095.1 vs. uniprot
Match: A0A2P4X495_9STRA (2OG-Fe(II) oxygenase superfamily protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X495_9STRA)

HSP 1 Score: 180 bits (457), Expect = 3.820e-52
Identity = 93/216 (43.06%), Postives = 132/216 (61.11%), Query Frame = 1 
Query:    1 PAAQETMNAFYSGATIVAERLLEGIASNLGLPPAHFAPSF-EPHTSYLRLNYYPPCPEPCDSFSVHRHSDAGAITVLLQEHGTTALQVNHHYTGRWVSIPPVKGALTINVGDMLQVWSNDLFRAPEHRVLSQTDHDRFSAPFFYNPAYHADIAPLPWVAAKGGDEKRRTGLGTTGLELQGPARYRTVNWGEFRLKRFAGDYADQGTEEVQISHYKL 645
            P     M+ ++     +A RLL+  A  LG  PA F   F + +++++RLN+YP   +P  +  V+ H+DAGA+T+LLQ+    +LQV H Y+  W ++PP KG  TIN+GDM+QVWSND F AP HRVL+    DRFSAPFFYNP+Y A + P   +  K GD                 A YR ++WGEFRL+R+ G+ AD+G +E+QI  +K+
Sbjct:  143 PGFHNEMSTYFGKMEYIARRLLKVFAVALGEEPAFFDKFFYDDNSNHMRLNHYPATDDPEKTMGVYHHTDAGALTILLQDDDVASLQVFHRYSQTWTNVPPRKGTYTINIGDMVQVWSNDRFVAPLHRVLANGGADRFSAPFFYNPSYKAQVEP---IVVKAGDV----------------ANYRALSWGEFRLRRYQGNVADKG-KEIQIGDFKI 338
[Close]
BLAST of mRNA_H-paniculata_contig7120.15095.1 vs. uniprot
Match: UPI00145E68BE (hypothetical protein n=1 Tax=Candidatus Competibacter phosphatis TaxID=221280 RepID=UPI00145E68BE)

HSP 1 Score: 179 bits (453), Expect = 6.550e-52
Identity = 97/226 (42.92%), Postives = 131/226 (57.96%), Query Frame = 1 
Query:    1 PAAQETMNAFYSGATIVAERLLEGIASNLGLPPAHFAPSF-EPHTSYLRLNYYPPCPEPCDS----------FSVHRHSDAGAITVLLQEHGTTALQVNHHYTGRWVSIPPVKGALTINVGDMLQVWSNDLFRAPEHRVLSQTDHDRFSAPFFYNPAYHADIAPLPWVAAKGGDEKRRTGLGTTGLELQGPARYRTVNWGEFRLKRFAGDYADQGTEEVQISHYKL 645
            P+ +  + A+Y+    +A RL++ + +NL +PP +    F    TS+ RLNYYP CPEP               V+ H+DAGA+T+LLQ+ G   L+V     GRW  + P    L +N+GD+LQVWSND ++AP HR L+ +  +R+SAPFFYNP+Y  D APL  V                 ++ + PARYR +NWGEFR  R AGDYAD G E VQI HY L
Sbjct:  111 PSFEPAVRAYYAACERLAVRLIDALNTNLAMPPRYLRSFFGTAQTSFARLNYYPACPEPAAPEGASTPSQGFLGVNHHTDAGALTLLLQD-GVPGLEVFRE--GRWHLVEPRADTLVVNIGDVLQVWSNDRYQAPLHRALAPSGRERYSAPFFYNPSYATDYAPLSSV-----------------VDSRNPARYRPINWGEFRALRAAGDYADHGAE-VQIEHYAL 315
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7120.15095.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L186_9PHAE1.180e-10573.95Fe2OG dioxygenase domain-containing protein n=2 Ta... [more]
A0A836CKJ2_9STRA2.930e-7253.95Dioxygenase n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A0U9HJD0_KLENI4.620e-5646.052-oxoacid-dependent dioxygenase n=1 Tax=Klebsormid... [more]
A0A2D4BIM9_PYTIN3.470e-5546.67Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A7S2S5H2_9STRA6.240e-5546.19Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A8J5XZK3_DIALT1.070e-5444.65Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A7S1HWL8_9EUGL1.500e-5449.30Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
W2PKB3_PHYPN1.220e-5345.83Fe2OG dioxygenase domain-containing protein n=15 T... [more]
A0A2P4X495_9STRA3.820e-5243.062OG-Fe(II) oxygenase superfamily protein n=2 Tax=P... [more]
UPI00145E68BE6.550e-5242.92hypothetical protein n=1 Tax=Candidatus Competibac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7120contigH-paniculata_contig7120:6072..11702 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score311.2
Seed ortholog evalue3.6e-82
Seed eggNOG ortholog2880.D8LDV5
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Belongs to the iron ascorbate-dependent oxidoreductase family
EggNOG OGsCOG3491@1,KOG0143@2759
Ec32 ortholog descriptiondioxygenase
Ec32 orthologEc-08_003510.1
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size648
Cds size630
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7120.15095.1prot_H-paniculata_contig7120.15095.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig7120 6072..11684 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930862.3850138-CDS-H-paniculata_contig7120:6071..62821622930862.3850138-CDS-H-paniculata_contig7120:6071..6282Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7120 6072..6282 -
1691481486.083293-CDS-H-paniculata_contig7120:6071..62821691481486.083293-CDS-H-paniculata_contig7120:6071..6282Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7120 6072..6282 -
1622930862.4127784-CDS-H-paniculata_contig7120:7266..73681622930862.4127784-CDS-H-paniculata_contig7120:7266..7368Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7120 7267..7368 -
1691481486.0933979-CDS-H-paniculata_contig7120:7266..73681691481486.0933979-CDS-H-paniculata_contig7120:7266..7368Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7120 7267..7368 -
1622930862.4313686-CDS-H-paniculata_contig7120:8978..90551622930862.4313686-CDS-H-paniculata_contig7120:8978..9055Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7120 8979..9055 -
1691481486.1011977-CDS-H-paniculata_contig7120:8978..90551691481486.1011977-CDS-H-paniculata_contig7120:8978..9055Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7120 8979..9055 -
1622930862.4482872-CDS-H-paniculata_contig7120:11444..116841622930862.4482872-CDS-H-paniculata_contig7120:11444..11684Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7120 11445..11684 -
1691481486.1092424-CDS-H-paniculata_contig7120:11444..116841691481486.1092424-CDS-H-paniculata_contig7120:11444..11684Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7120 11445..11684 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930862.4713287-UTR-H-paniculata_contig7120:11684..117021622930862.4713287-UTR-H-paniculata_contig7120:11684..11702Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7120 11685..11702 -
1691481486.1181026-UTR-H-paniculata_contig7120:11684..117021691481486.1181026-UTR-H-paniculata_contig7120:11684..11702Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7120 11685..11702 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig7120.15095.1

>prot_H-paniculata_contig7120.15095.1 ID=prot_H-paniculata_contig7120.15095.1|Name=mRNA_H-paniculata_contig7120.15095.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=210bp
MNAFYSGATIVAERLLEGIASNLGLPPAHFAPSFEPHTSYLRLNYYPPCP
EPCDSFSVHRHSDAGAITVLLQEHGTTALQVNHHYTGRWVSIPPVKGALT
INVGDMLQVWSNDLFRAPEHRVLSQTDHDRFSAPFFYNPAYHADIAPLPW
VAAKGGDEKRRTGLGTTGLELQGPARYRTVNWGEFRLKRFAGDYADQGTE
EVQISHYKL*
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mRNA from alignment at H-paniculata_contig7120:6072..11702-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig7120.15095.1 ID=mRNA_H-paniculata_contig7120.15095.1|Name=mRNA_H-paniculata_contig7120.15095.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5631bp|location=Sequence derived from alignment at H-paniculata_contig7120:6072..11702- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCGGCTGCGCAGGAGACAATGAACGCGTTTTACTCAGGCGCGACTATCGT
AGCGGAGCGGCTCCTGGAAGGAATCGCGTCCAACTTGGGCTTACCCCCCG
CGCACTTTGCTCCCTCTTTCGAGCCGCACACCTCTTACTTGAGGTTGAAC
TATTATCCGCCCTGCCCGGAACCGTGTGACTCTTTTTCAGTGCACCGACA
CTCTGACGCTGGGGCCATCACCGTGTTGCTGCAGGAACACGGTACTACTG
CCTTGCAGGTGAATCTGTAGTCTGCTCCTACGATAGGGGTTACTCTCCCT
TCTTTTGCATGAGAGTAATTTATCCTCGTAGCAGTCGTCGCTGTATTCAT
CTTCTACTCTCTTTTTTAGGGTGATGACCGGTTGCTCTTCACTGAAAGTT
TGAAACCAGTTGCTCCACGTACGGACCTGAACAGTTAACAATGAATGCAA
TATTATGGCGGAATGGATAGCTGCTGTCAAGGTGGTCGTTAGCTGTGTCA
CCGTGCTTTCCTAAGGAAGGATGACTCGTGAGTGGGTGAGTGGATGCTGC
TTTGCTTCTTCACAACCTTTCGCAGACTGAAGTGTTTGAGCAAAACAAAT
TTCCTTTTGCAAATTCCTATTTGGTCATACTCAGGAGTATATAGCTAAGA
TCGAGCTGCTCATTGCAGACCCTCTTCGGACTCCGGACCCCAGCTTAGAG
ACACCAACGTCTCTCGTTACGGAAGGAATTCCTTTCAAAAATTGTATATT
CCATGAGAGATACTAATGAATAGTCGCTGGTTGTGACAAAGAATTCGTTT
TATAGCGAGACGTGAGTGTAGGTGGACTGGTTTATGGGACGAGGTCACTG
TTGGCTTTTACTATTACGCACGACTAGAATAGGAATTAGTGAAAGGAATT
CGTTTTGCGTGAACGCTCTATTGCAGTGTTCGAGAAAAGAATGGAAGTGG
GTATTGCGCATGCTGCAGCATCGTTGCGTTTCCCAGACTGCAGCAGTGTC
AAAGTATCATGAGAACGACTGTGGCGTCTGGCTTGTACAGAATCGAAAAA
AGTCTGTTTTCGTAGTGCTATGCGGAAGGTATTTTGTCTGTAGCTTATTT
TCTGTATACGAGGAGGTTTGCCGGTGGGACGTACCGTACCATTGTCGGGC
ACATGGTGCTGGACAGCTTTCGTCAAAGCCTGTCGGCCGTGAAACTGTTT
TGTTGATGGTCGGTGTATTCTTGTTCCGTTAAACTAGCACCGCTTAGTCA
ATTCCCATTGATGACGGAGTAGACACCTCTCACCCCCACACGTCTAAACA
GAGACAGACAGGCAGTATTGGTAGTCCAGCGTACCTATTTTCTTGCACAA
GTTCGCGAGAGCGAGACATTGGTGACTCTTTTGTCATTTTCCAGTTTTTA
AAGCGGCAATGTAGTCTAATCGTTCTCCCAGCGAGAACTTTGTTTTGCCG
ATTTTATCACACTATTTTCTGAAATCTTGATATTCGGTGTATTTCTGTCT
ATCTCTGGAGAAAAAAGTGCAACTGGAAAAAAATGGCAAAAATGGCGAGA
TGAGTAGCCTCTCAGCTTGACGGCTGTAACAAGTAGACGAATAACATATC
TATCCTCTACACACACATATGACCAATTTCCCAATTCTGATCCTTTTGGT
CCAAAATTCGGTGAGTTCAGTTCTGCACCGCCGAAGCCCATTTAGGGGGG
GGAACAAACGTTAGTCAAAAACGCCACGATGAGATCTGGGGTTGAGAGCC
TAGCTTTCCATCAACTAATTTTCCCAAGGCATGGAAGGTACAAATGAGAC
CTCTTAAGTTTCCGACGTTTTGGAAAAAGTTGAATTTTCAAATCTTGTAA
CTTCACCATTTCCGCTGAAACCAGAACCACAGTCTGCCCCACACGATGTA
GTCATTATTCGATTTCGTGTACACATGTTATAGTTGTTATCCCGCAGAAG
TTTTAGGTTTATTTTGAAAAATGGATGTGACGGAAACGCTCACTTTTGTT
CGCCTCTGGTAATGCCCCCAACCAATTCCGGGGGGCTAATTGGTTCGCGG
TACGGCAGTCAGTCCACTGGTGCTCCGCGCGGTCCGCTTGCTTCAGCATT
AGTCGGTAATGTGTCGGTTCAATGATTGTCTTCTCCGACCCGTATAACCA
TAGTAATTGAATGACCAATACACAGCCCCAAAACTTATGCTCACGATACA
TTGTTGGGATTGGTACACAACATGGTTCTGAGTTGACTAAACTTGACGTT
GAAGTAGCGTACAGTCGTGAGCAGTGATACGAAGCGTGATGTGGTGTTGA
AGGGGTACACATGAATTTCAATGGTGGCTTGCAGCAGAGTACAGGGTATT
GAACACCCCAGTACACGGGTTTCCCATGCACACGGAACTGAATGGTCGCA
CTGTTGGGTGTGTTCGAAACCGACAGCAGAATCGGAAACGAGAGCACGAC
CAAAAACACGAACAGACGTAATGCACTAAAATAAACACAGTTATTCCCCC
CCAAAAACCCCAACAACAACAGTAATGGATCATGACAATAACAAAAAATA
CAACGACGAAAACGGAAATGCCGCCTCCCCCATACAACATGAAATGATGA
TAAAACAAAATTAATGCCCGCCCTTGACTGTTGTTGCTCGTCGGCAGGTG
AACCATCACTACACGGGACGGTGGGTGTCCATTCCCCCAGTCAAGGGTGC
ACTTACAATCAACGTCGGCGACATGTGAGACTCAAGGTTCCGTACGTGAG
CGTCTGTATTTCCCTGTTTAGCCTTCGGTTGGAAGGGTCCTGTGCCATTT
GCGCAAGCTACATCGGTAGAGGTGTATGATCCATTCAAGAGATTTAAGGG
ACACTCACGACACCTGGAGAAATGTCAAGATAGCTAAGGTAACCAATCCG
CAGCATCCTGTGTGCTGAAAAAAAAAACTGTTGGACAAAGTCAGTTTTGC
AATGCAAATGCGACGGTGGCAATAGGTGCCACAAACACGTTGTTCGCACA
ATATAAACTCCCCAACGCTGTGCAGCGTATAGTGTTTGTTGCAGTAGAGT
ATTCGTATAATAGTGCAATGTACATTACGCTGTCTTTGCACATGGTTACA
TCGTTTTGCTGCAATAATGATTTACCAAGGCACAACGTGGATACACACAC
ACACACACACACACACACACACACACATATATATATATATATATATATTA
CGTCTCCCGACTACTGGCGCGTTTTCTTGATTAAGTAAACGTATAATCGA
GTACAGCCAACCCGAAGATTGATGAAGGTGTTTGAGGCGATAGCACTGTG
GGGTGCCTACTTTCGGTTGCCTCGTTCTCGTCCATATTCGTTCTCGTTGT
AACTTCAAACGTCAACCCTTTGTAGCCGCCACGAGTGACGAAGGTCAACA
AAGGGAAAATAATATCATTCGCCAAAACAACTGAATTTAAGTACCGATTA
TGCATTTTGGGACGGCTGGTGCAATGCTCACTGGACGGTGTGCACGGAGG
CGCTAGATTAAAATTTCTTCACTGTTTAACAAGAAATGACATTTACATTC
GTTGTGCTTCACAGGATGCAATAACATTCATCTACTTGCCTAAACATAAT
TAGGCCTGTCCCATAAATTACCCAGGGTCGGTCGCCTGTGACTCTTGCCC
ATTCCAAGTTGCTCTGCTCATTCCCGGTGTCTTGCATGAAAACGTGTGAA
GCATGAGAGAGGGTGATATGGCCTGTCTCGGCGTAAGCACCCCCTTTTCG
TGCAGGAACAGATAGATCCGAGCCATTCGTTAATTCATGAATTTCACGTC
AACCGTTCACTCAGCTATCCGTACCTTCATTGTTTCGTGTTTATCGATGA
TGATCATGAATCCATTTCGTAGCCCTCGAGACACTGCTGTGCTTGATACG
CTGGAAGACGCCATGTCGCATTTCCCTAACCCCAAAGGTTTAAGATTATT
ACAGTAAAAACCGGAAGTGATATGCCGATGGAGTCAAAACCTGAAAGCGT
GGCTTGTGTAACGTCATCTAGAGGCAAACAGATAACTCTGCACTACAGAG
GAAGTGACTGCCCTAGCTACTCCCCTCCCTCCCTTTTGACTTGGTCAAAT
ATATCTGGATAGGTCTTGAAGCATCCTGTTCGCCTAAGACGTGACTCGCC
GTTGAAAGCTGATCGTTATAATCCCTTCTGATGCCTGCACCATACACAAA
TTTAAAGCATGAGATGCACAACGTCCCCATGAATACATATTTCCTCTGTC
CCATGAGTATTCCTCGTTGCGGTTATTGATGTACTTAGCGCCCCTGTCGC
CGCCCTCGCCACACACTTGATGCTATCTGTACAGGCTGCAAGTGTGGAGC
AATGACTTATTTCGTGCCCCGGAGCATCGGGTTCTGAGCCAGACAGACCA
TGACCGGTTCTCCGCCCCGTTCTTCTACAATCCAGCGTAAGGCTGCACCG
CCGATGTCTGTTGTGCTGTCATGAACCCCTGAAGTCGCAACACATCGTGA
AATGAAGAAGGACCTATCAAACGACAGATACGACCATATCGGTGGTAAAG
AGGTTGAGATGATAAGTTCTTTGGATGCCAATGTTTCAGTAGTTTGTTTG
CTTCGCCATGTACCGCTCATCCAGGTTGTTGGCGACTGAAAGACGTCTGC
GACGGAGGGGAAACGATCTCGGGATTTTGTTGGGATTTTCGTACATAGCA
CGTCCCAGAAGATCCGTCTTGCTTCGACTTATATTCAGAACCGAAAGTCG
CGGCGTCACGATTGTGTTGTACCGTATGTGCAGCTGTACTACAAGCATTT
TTCTATGCCTTGGGTGTGAATTAATTTTGACTTGGAAGGTGCTCTCCGTT
TTTTTCACCTTATAGCGTTCGCAAGCACTATTTGAATATTGCTTCATAGA
TAGAGCCCTATAGTGATGCAATGGTAGAGCGCTTGCCCACTACAACGGTT
AGCACTGACTGTTGGCGCAATTGTCTGCATTGCATCTCATTAAGCTATCT
CTCGTCGAAGGTGTTGTTTTTCTAGTGCAGCTCTCTGGTTGACTGGATGC
ACATTTTCCCATGTAGTTCCCACTATATCTTGCAACGTGCTAGTCGCTGG
AACAATCGTGTATCCACTCGCGTAGTGCACGCTGATTTGAGCTACAATGT
GTTTCTGAAGCAGCCAATTTTGAGCCGCTAGCAGCTCAATACTGGATCAA
TGATTCGGTAAGTACAAGCTCTACTATAGCTTGACTGCTGAAAATGTTCA
ACAGGGAAGTTTTAGCCACCCTTCTCTACACAGAAGAACTAGCGCATTAG
AACTTGAGCTTTATAGCCTCGACCTTTTATTACCTTCATAGTAGAAAAGT
TATACCTTATTCGTGGGCAGCACTGCGATGCATTTGACCGCTATCCGATT
TGTTCTCTTCCTGTCCGTAGGTACCACGCCGATATCGCACCCTTGCCGTG
GGTTGCGGCTAAAGGAGGCGACGAAAAGAGACGGACCGGGCTTGGGACAA
CCGGCCTCGAGCTACAGGGACCAGCTCGGTACCGAACCGTGAACTGGGGC
GAGTTCCGCCTCAAGCGCTTCGCAGGCGATTACGCCGACCAAGGCACCGA
AGAAGTGCAGATTTCGCACTACAAGCTGTAG
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Coding sequence (CDS) from alignment at H-paniculata_contig7120:6072..11702-

>mRNA_H-paniculata_contig7120.15095.1 ID=mRNA_H-paniculata_contig7120.15095.1|Name=mRNA_H-paniculata_contig7120.15095.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1260bp|location=Sequence derived from alignment at H-paniculata_contig7120:6072..11702- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAACGCGTTTTACTCAGGCGCGACTATCGTAGCGGAGCGGCTCCTGGA
AGGAATCGCGTCCAACTTGGGCTTACCCCCCGCGCACTTTGCTCCCTCTT
TCGAGCCGCACACCTCTTACTTGAGGTTGAACTATTATCCGCCCTGCCCG
GAACCGTGTGACTCTTTTTCAGTGCACCGACACTCTGACGCTGGGGCCAT
CACCGTGTTGCTGCAGGAACACGGTACTACTGCCTTGCAGATGAACGCGT
TTTACTCAGGCGCGACTATCGTAGCGGAGCGGCTCCTGGAAGGAATCGCG
TCCAACTTGGGCTTACCCCCCGCGCACTTTGCTCCCTCTTTCGAGCCGCA
CACCTCTTACTTGAGGTTGAACTATTATCCGCCCTGCCCGGAACCGTGTG
ACTCTTTTTCAGTGCACCGACACTCTGACGCTGGGGCCATCACCGTGTTG
CTGCAGGAACACGGTACTACTGCCTTGCAGGTGAACCATCACTACACGGG
ACGGTGGGTGTCCATTCCCCCAGTCAAGGGTGCACTTACAATCAACGTCG
GCGACATGTGAACCATCACTACACGGGACGGTGGGTGTCCATTCCCCCAG
TCAAGGGTGCACTTACAATCAACGTCGGCGACATGCTGCAAGTGTGGAGC
AATGACTTATTTCGTGCCCCGGAGCATCGGGTTCTGAGCCAGACAGACCA
TGACCGGTTCTCCGCCCCGTTCTTCTACAATCCAGCGCTGCAAGTGTGGA
GCAATGACTTATTTCGTGCCCCGGAGCATCGGGTTCTGAGCCAGACAGAC
CATGACCGGTTCTCCGCCCCGTTCTTCTACAATCCAGCGTACCACGCCGA
TATCGCACCCTTGCCGTGGGTTGCGGCTAAAGGAGGCGACGAAAAGAGAC
GGACCGGGCTTGGGACAACCGGCCTCGAGCTACAGGGACCAGCTCGGTAC
CGAACCGTGAACTGGGGCGAGTTCCGCCTCAAGCGCTTCGCAGGCGATTA
CGCCGACCAAGGCACCGAAGAAGTGCAGATTTCGCACTACAAGCTGTAGG
TACCACGCCGATATCGCACCCTTGCCGTGGGTTGCGGCTAAAGGAGGCGA
CGAAAAGAGACGGACCGGGCTTGGGACAACCGGCCTCGAGCTACAGGGAC
CAGCTCGGTACCGAACCGTGAACTGGGGCGAGTTCCGCCTCAAGCGCTTC
GCAGGCGATTACGCCGACCAAGGCACCGAAGAAGTGCAGATTTCGCACTA
CAAGCTGTAG
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