mRNA_H-paniculata_contig710.15064.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig710.15064.1 vs. uniprot
Match: D8LSM4_ECTSI (Alkyl transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM4_ECTSI) HSP 1 Score: 308 bits (790), Expect = 7.560e-93 Identity = 208/400 (52.00%), Postives = 232/400 (58.00%), Query Frame = 1
Query: 544 GIRV-PRHVAFVMDGNGRWAANKKMPRTAGHIEGSRRAAEAVEACRELGVKFVTLYAFSTENWNRPESEVSFLMNLMEKTLLDQRDGLRRGRIRLAAIGELHRLPPRLRALLQEMHEESFGETPMAAESRNEANAAEGGGAAARGERDSSTAPNGCANGDHSGSDNDFLGTRRGRSEALVLSCDATTITREPSTGKATAQGTESGLIYGQTGSDSHAEDLSSLVGARMEDDDSGRPSXXXXXXXXXXXXSARNREEERRLDYQIRLAGPPQQPDSRAAAAPIMTLCLAISYGGRAEVAAAARELAAEAAAGRLDPQDIDEDALGRRLSTARLSIPDPDLVVRTSGESRLSNLLLWQAAYTELYVVGKAWPEFRRPDLLEAFREFGRRRRRFGRTPEQTAE 1740
G+RV PRHVAFVMDGNGRWAAN+ +PR GH EG+RRA EAVEACR LGV+FVTLYAFSTENW RP EVSF+M+LME+TLL+QRD LRR IRL AIGEL RLP RLR+LL E+ E+S XXXXXXXXXXXX +A P QP + A P MTLCLAISYGGR+E+ AAARELAAEAAAGRLDP DIDE AL RRLSTARL IPDPDLVVRTSGESRLSNLL+WQ+AY+EL VVGKAWP+FRRPDL+EAFR++GRRRRRFG+TPEQ AE
Sbjct: 67 GLRVVPRHVAFVMDGNGRWAANRNLPRRIGHAEGARRAGEAVEACRRLGVEFVTLYAFSTENWRRPTGEVSFIMDLMEETLLEQRDSLRRNGIRLTAIGELDRLPARLRSLLLEIQEDSXXXXXXX---------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAPPLPQPVA-APPTPTMTLCLAISYGGRSELVAAARELAAEAAAGRLDPADIDEPALARRLSTARLGIPDPDLVVRTSGESRLSNLLVWQSAYSELCVVGKAWPDFRRPDLVEAFRDYGRRRRRFGKTPEQMAE 372
BLAST of mRNA_H-paniculata_contig710.15064.1 vs. uniprot
Match: A0A6H5KLI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLI8_9PHAE) HSP 1 Score: 311 bits (796), Expect = 1.390e-90 Identity = 219/492 (44.51%), Postives = 257/492 (52.24%), Query Frame = 1
Query: 343 AGFKTNGGSRVGEENNQRKPGYFARGIAASENFF--GVNSNIGHAAEASAAATGGDEHGQQ----------------------KKLSQRERGIRV-PRHVAFVMDGNGRWAANKKMPRTAGHIEGSRRAAEAVEACRELGVKFVTLYAFSTENWNRPESEVSFLMNLMEKTLLDQRDGLRRGRIRLAAIGELHRLPPRLRALLQEMHEESFGETPMAAESRNEANAAEGGGAAARGERDSSTAPNGCANGDHSGSDNDFLGTRRGRSEALVLSCDATTITREPSTGKATAQGTESGLIYGQTGSDSHAEDLSSLVGARMEDDDSGRPSXXXXXXXXXXXXSARNREEERRLDYQIRLAGP-PQQPDSRAAAAPIMTLCLAISYGGRAEVAAAARELAAEAAAGRLDPQDIDEDALGRRLSTARLSIPDPDLVVRTSGESRLSNLLLWQAAYTELYVVGKAWPEFRRPDLLEAFREFGRRRRRFGRTPEQTAE 1740
+G G G+ +R G +RG+AA+E+FF G G A+ + G + G + G+RV PRHVAFVMDGNGRWA ++ +PR GH EG+RRA EAVEACR LGV+FVTLYAFSTENW RP EVSFLM+LME+TLL+QRD LRR IRL IGEL RLP RLR+LL E+ E+S N + PS XXXXXX +A P P+QP + A MTLCLAISYGGR+E+AAAARELA EAAAGRLDP DIDE AL RRLST+RL IPDPDLVVRTSGESRLSNLL+WQ+AY+EL VVGKAWP+FRRPDL+EAFR++GRRRRRFG+TPEQ AE
Sbjct: 223 SGVGPGGAHGEGKRAEKRDRGVLSRGMAATEHFFANGRRRKNGRQAKGDESDARGSKGGGEGPXXXXXXXXXXXXXXXXXXXXXXXXXEAEGLRVVPRHVAFVMDGNGRWAVSRNLPRRTGHAEGARRAGEAVEACRRLGVEFVTLYAFSTENWRRPAGEVSFLMDLMEETLLEQRDSLRRNGIRLTVIGELDRLPARLRSLLLEIQEDS----------------------------------------------NXXXXXXXXXXXXXXXXXXXXGVP----------------------------------------------PSVAIPVAXXXXXXXXXXXXXXXXXXXXXXIAPPLPKQPVAAAPPTATMTLCLAISYGGRSELAAAARELAVEAAAGRLDPADIDEPALARRLSTSRLGIPDPDLVVRTSGESRLSNLLVWQSAYSELCVVGKAWPDFRRPDLVEAFRDYGRRRRRFGKTPEQMAE 622
BLAST of mRNA_H-paniculata_contig710.15064.1 vs. uniprot
Match: A0A835ZI19_9STRA (Alkyl transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI19_9STRA) HSP 1 Score: 205 bits (521), Expect = 5.530e-56 Identity = 133/389 (34.19%), Postives = 176/389 (45.24%), Query Frame = 1
Query: 550 RVPRHVAFVMDGNGRWAANKKMPRTAGHIEGSRRAAEAVEACRELGVKFVTLYAFSTENWNRPESEVSFLMNLMEKTLLDQRDGLRRGRIRLAAIGELHRLPPRLRALLQEMHEESFGETPMAAESRNEANAAEGGGAAARGERDSSTAPNGCANGDHSGSDNDFLGTRRGRSEALVLSCDATTITREPSTGKATAQGTESGLIYGQTGSDSHAEDLSSLVGARMEDDDSGRPSXXXXXXXXXXXXSARNREEERRLDYQIRLAGPPQQPDSRAAAAPIMTLCLAISYGGRAEVAAAARELAAEAAAGRLDPQDIDEDALGRRLSTARLSIPDPDLVVRTSGESRLSNLLLWQAAYTELYVVGKAWPEFRRPDLLEAFREFGRRRRRFG 1716
RVP+HVAFV+DGNGRWA + +PRTAGHIEG++RA E +E CRELGV++VTL+ FSTENW RP +EV+ LM L+E + R +R+ IRL IG+ RL L+ L++E+ E+ S+ A+ D MT+CLA+SYGGR E+A AA+ +A A GRL D+ E+ L LST + +PDPDL++RTSGE R+SN LLWQAAY+ELYV KAWP+F+ DL+EAF++FG R+RRFG
Sbjct: 33 RVPKHVAFVLDGNGRWATRRGLPRTAGHIEGAKRALEVIELCRELGVQYVTLFTFSTENWKRPAAEVASLMALLEHNIEANRRAMRQNGIRLVLIGQKERLSTGLQCLVEEVQRET------------------------------------------------------------------------------------------------------SVADAQQSGDQ--------------------------------------------------MTVCLAVSYGGRDEIARAAKAVALAVAEGRLSADDVTEEVLQGYLSTTQAGVPDPDLIIRTSGEHRISNFLLWQAAYSELYVSAKAWPDFKAADLVEAFQDFGTRQRRFG 269
BLAST of mRNA_H-paniculata_contig710.15064.1 vs. uniprot
Match: A0A4V1S5M1_9BACT (Isoprenyl transferase n=3 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4V1S5M1_9BACT) HSP 1 Score: 183 bits (464), Expect = 8.800e-49 Identity = 122/388 (31.44%), Postives = 168/388 (43.30%), Query Frame = 1
Query: 553 VPRHVAFVMDGNGRWAANKKMPRTAGHIEGSRRAAEAVEACRELGVKFVTLYAFSTENWNRPESEVSFLMNLMEKTLLDQRDGLRRGRIRLAAIGELHRLPPRLRALLQEMHEESFGETPMAAESRNEANAAEGGGAAARGERDSSTAPNGCANGDHSGSDNDFLGTRRGRSEALVLSCDATTITREPSTGKATAQGTESGLIYGQTGSDSHAEDLSSLVGARMEDDDSGRPSXXXXXXXXXXXXSARNREEERRLDYQIRLAGPPQQPDSRAAAAPIMTLCLAISYGGRAEVAAAARELAAEAAAGRLDPQDIDEDALGRRLSTARLSIPDPDLVVRTSGESRLSNLLLWQAAYTELYVVGKAWPEFRRPDLLEAFREFGRRRRRFG 1716
+PRH+A +MDGNGRWA + +PR GH G+ E +EAC ELGV+++TLYAFS+ENW RPESEVS LM L+++ L ++ L+R +RL AIG++ RLP + R L+ ++ +E+ G T + TL LA+SYGGR E+ AA+ LAA+AAAG++ P +ID + RL TA IPDPDL+VRTSGE R+SN LLWQ +Y+E+ +V K WP+FR+ DL +A +E+ R RRFG
Sbjct: 7 IPRHIAIIMDGNGRWAKERGLPRLEGHRAGAESVREVMEACIELGVEYLTLYAFSSENWRRPESEVSALMGLLDRFLKEKAKDLQRQNVRLQAIGQIDRLPEKTRKLITKIQDETAGNTAL--------------------------------------------------------------------------------------------------------------------------------------------------------------TLVLALSYGGREEIVEAAKSLAADAAAGKISPAEIDSELFASRLQTA--GIPDPDLLVRTSGEMRVSNFLLWQISYSEMVIVRKFWPDFRQKDLFDAVQEYQCRHRRFG 234
BLAST of mRNA_H-paniculata_contig710.15064.1 vs. uniprot
Match: A0A4Q2YF75_9BACT (Isoprenyl transferase n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q2YF75_9BACT) HSP 1 Score: 181 bits (458), Expect = 5.740e-48 Identity = 130/388 (33.51%), Postives = 167/388 (43.04%), Query Frame = 1
Query: 553 VPRHVAFVMDGNGRWAANKKMPRTAGHIEGSRRAAEAVEACRELGVKFVTLYAFSTENWNRPESEVSFLMNLMEKTLLDQRDGLRRGRIRLAAIGELHRLPPRLRALLQEMHEESFGETPMAAESRNEANAAEGGGAAARGERDSSTAPNGCANGDHSGSDNDFLGTRRGRSEALVLSCDATTITREPSTGKATAQGTESGLIYGQTGSDSHAEDLSSLVGARMEDDDSGRPSXXXXXXXXXXXXSARNREEERRLDYQIRLAGPPQQPDSRAAAAPIMTLCLAISYGGRAEVAAAARELAAEAAAGRLDPQDIDEDALGRRLSTARLSIPDPDLVVRTSGESRLSNLLLWQAAYTELYVVGKAWPEFRRPDLLEAFREFGRRRRRFG 1716
+PRH+A +MDGNGRWA + +PR GH G+ E +EAC+ELGV+++TLYAFS+ENWNRPE EV LMNL+++ L +Q L + ++RL AIG+L RLPP+ TRE RLD I SR A MTL LA+SYG R E+ AAAR LA +A AG++ P I+ +A RL TA IPDPDL+VRTSGE R+SN LLWQ +Y E+ +V K WP+FR+ DL E+ RE+ R RRFG
Sbjct: 7 IPRHIAIIMDGNGRWAKERGLPRREGHRAGAESIREVMEACKELGVEYLTLYAFSSENWNRPEDEVQALMNLLDRFLDEQAKELDKQKVRLQAIGQLDRLPPK---------------------------------------------------------------------------------TRE-------------------------------------------------------------------RLDRII----------SRTAEHRSMTLVLALSYGAREEIVAAARALAEDALAGKISPDAINAEAFSSRLQTA--GIPDPDLLVRTSGELRVSNFLLWQISYAEIVIVKKFWPDFRQGDLFESVREYQSRHRRFG 234
BLAST of mRNA_H-paniculata_contig710.15064.1 vs. uniprot
Match: UPI0018690B5E (isoprenyl transferase n=1 Tax=Luteolibacter sp. NBU1238 TaxID=2776705 RepID=UPI0018690B5E) HSP 1 Score: 181 bits (458), Expect = 5.740e-48 Identity = 128/388 (32.99%), Postives = 164/388 (42.27%), Query Frame = 1
Query: 553 VPRHVAFVMDGNGRWAANKKMPRTAGHIEGSRRAAEAVEACRELGVKFVTLYAFSTENWNRPESEVSFLMNLMEKTLLDQRDGLRRGRIRLAAIGELHRLPPRLRALLQEMHEESFGETPMAAESRNEANAAEGGGAAARGERDSSTAPNGCANGDHSGSDNDFLGTRRGRSEALVLSCDATTITREPSTGKATAQGTESGLIYGQTGSDSHAEDLSSLVGARMEDDDSGRPSXXXXXXXXXXXXSARNREEERRLDYQIRLAGPPQQPDSRAAAAPIMTLCLAISYGGRAEVAAAARELAAEAAAGRLDPQDIDEDALGRRLSTARLSIPDPDLVVRTSGESRLSNLLLWQAAYTELYVVGKAWPEFRRPDLLEAFREFGRRRRRFG 1716
+PRH+A +MDGNGRWA + +PR AGH G+ E VEAC+ELGV+++TLYAFS+ENWNRP +EV+ LM L+E+ L ++ D L + ++L AIG L RLP R RA L E TA NG +TL LA+SYG R E+ AAR LA +AAAG++DP DID D RL TA IPDPDL++RTSGE R+SN LLWQ +Y E+ + K WP+F + DL EA +E+ RR RRFG
Sbjct: 7 IPRHIAIIMDGNGRWAKERGLPRRAGHRAGAESVRECVEACKELGVEYLTLYAFSSENWNRPAAEVTALMALLERFLEEKADELMKQDVKLQAIGHLDRLPDRTRAKLNAAIER--------------------------------TAQNGS------------------------------------------------------------------------------------------------------------------------------LTLVLALSYGSREELVEAARSLATDAAAGKIDPADIDGDLFASRLYTA--GIPDPDLLIRTSGELRVSNFLLWQISYAEIVIFKKFWPDFHQADLFEAAKEYARRHRRFG 234
BLAST of mRNA_H-paniculata_contig710.15064.1 vs. uniprot
Match: A0A2A2QXE8_9BACT (Isoprenyl transferase n=1 Tax=Verrucomicrobiae bacterium Tous-C4TDCM TaxID=1982332 RepID=A0A2A2QXE8_9BACT) HSP 1 Score: 178 bits (451), Expect = 5.100e-47 Identity = 128/388 (32.99%), Postives = 164/388 (42.27%), Query Frame = 1
Query: 553 VPRHVAFVMDGNGRWAANKKMPRTAGHIEGSRRAAEAVEACRELGVKFVTLYAFSTENWNRPESEVSFLMNLMEKTLLDQRDGLRRGRIRLAAIGELHRLPPRLRALLQEMHEESFGETPMAAESRNEANAAEGGGAAARGERDSSTAPNGCANGDHSGSDNDFLGTRRGRSEALVLSCDATTITREPSTGKATAQGTESGLIYGQTGSDSHAEDLSSLVGARMEDDDSGRPSXXXXXXXXXXXXSARNREEERRLDYQIRLAGPPQQPDSRAAAAPIMTLCLAISYGGRAEVAAAARELAAEAAAGRLDPQDIDEDALGRRLSTARLSIPDPDLVVRTSGESRLSNLLLWQAAYTELYVVGKAWPEFRRPDLLEAFREFGRRRRRFG 1716
+PRH+A +MDGNGRWA + +PR AGH G+ E VEAC+ELGV+++TLYAFS+ENWNRP +EV+ LM L+E+ L ++ D L + +RL AIG L RLP + R R+LD I +R A +TL LA+SYG R E+ AAR LAA+AAAG+LDP ID RL TA IPDPDL+VRTSGE R+SN LLWQ +Y E+ + K WP+F + DL EA +E+ RR RRFG
Sbjct: 7 IPRHIAIIMDGNGRWAKERGLPRLAGHRAGAESVRECVEACKELGVEYLTLYAFSSENWNRPAAEVTALMLLLERFLGEKADELMKQNVRLRAIGHLDRLPEKTR----------------------------------------------------------------------------------------------------------------------------------------------------RKLDKAI----------NRTAGNTSLTLVLALSYGSREEIVEAARSLAADAAAGKLDPATIDCATFASRLYTA--DIPDPDLLVRTSGELRVSNFLLWQISYAEIVIFKKFWPDFHQADLFEAAQEYARRHRRFG 234
BLAST of mRNA_H-paniculata_contig710.15064.1 vs. uniprot
Match: UPI00198BEAB0 (Isoprenyl transferase n=1 Tax=Gloeobacteraceae cyanobacterium ES-bin-144 TaxID=2762589 RepID=UPI00198BEAB0) HSP 1 Score: 177 bits (448), Expect = 1.300e-46 Identity = 125/388 (32.22%), Postives = 167/388 (43.04%), Query Frame = 1
Query: 553 VPRHVAFVMDGNGRWAANKKMPRTAGHIEGSRRAAEAVEACRELGVKFVTLYAFSTENWNRPESEVSFLMNLMEKTLLDQRDGLRRGRIRLAAIGELHRLPPRLRALLQEMHEESFGETPMAAESRNEANAAEGGGAAARGERDSSTAPNGCANGDHSGSDNDFLGTRRGRSEALVLSCDATTITREPSTGKATAQGTESGLIYGQTGSDSHAEDLSSLVGARMEDDDSGRPSXXXXXXXXXXXXSARNREEERRLDYQIRLAGPPQQPDSRAAAAPIMTLCLAISYGGRAEVAAAARELAAEAAAGRLDPQDIDEDALGRRLSTARLSIPDPDLVVRTSGESRLSNLLLWQAAYTELYVVGKAWPEFRRPDLLEAFREFGRRRRRFG 1716
+PRH+A +MDGNGRWA + +PR GH G+ E +AC ELGV+++TLYAFS+ENWNRP +EV LM+L+++ L ++ L + +IRL AIG+L RLP + RALL ++ MA R D++ +TL LA+SYGGR E+ +AAR LA +AAAG + P DID RL T IPDPDL+VRTSGE R+SN LLWQ +Y E+ +V K WP+FRR DL+E+ +E+ RR RRFG
Sbjct: 7 IPRHIAVIMDGNGRWAKERGLPRREGHRAGAESVREITDACIELGVEYLTLYAFSSENWNRPAAEVKALMSLLDRFLAEKAKDLDKQKIRLLAIGQLERLPNKTRALLDKI---------MA-----------------------------------------------------------------------------------------------------------------------------------RTADHKA------------------LTLVLALSYGGREEIVSAARSLATDAAAGAISPDDIDAPLFASRLQTH--GIPDPDLLVRTSGEMRVSNFLLWQISYAEIVIVKKFWPDFRRNDLIESVQEYQRRHRRFG 234
BLAST of mRNA_H-paniculata_contig710.15064.1 vs. uniprot
Match: A0A2G6J159_9PROT (Isoprenyl transferase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2G6J159_9PROT) HSP 1 Score: 177 bits (450), Expect = 1.460e-46 Identity = 129/394 (32.74%), Postives = 167/394 (42.39%), Query Frame = 1
Query: 550 RVPRHVAFVMDGNGRWAANKKMPRTAGHIEGSRRAAEAVEACRELGVKFVTLYAFSTENWNRPESEVSFLMNLMEKTLLDQRDGLRRGRIRLAAIGELHRLPPRLRALLQEMHEESFGETPMAAESRNEANAAEGGGAAARGERDSSTAPNGCANGDHSGSDNDFLGTRRGRSEALVLSCDATTITREPSTGKATAQGTESGLIYGQTGSDSHAEDLSSLVGARMEDDDSGRPSXXXXXXXXXXXXSARNREEERRLDYQIRLAGPPQQPDSRAAAAPIMTLCLAISYGGRAEVAAAARELAAEAAAGRLDPQDIDEDALGRRLSTARLSIPDPDLVVRTSGESRLSNLLLWQAAYTELYVVGKAWPEFRRPDLLEAFREFGRRRRRFGRTPEQ 1731
++PRHVA +MDGNGRWA ++ +PR GH EG+ V A R LG+ +TL+AFS +NW+RP EV LM L+ + +L++RD + IRL A+G++ RLP R +AL + D SA+NR MTL LA+SYGGR ++AAA R LAAE AAG+L P+ +DE AL RLSTA +P DL++RTSGE R+SN LLWQ AY EL + WP+FR+PDLLEA E+ RR RRFGRT EQ
Sbjct: 15 KLPRHVAIIMDGNGRWARSRGLPRVEGHREGAESVRSVVRASRALGISALTLFAFSEQNWDRPPDEVDALMELLYRYVLEERDEIMENDIRLTAVGDVSRLP-------------------------------------------------------------------RYVQQALSVLIDV----------------------------------------------------------------SAKNRS---------------------------MTLALALSYGGREDIAAAVRRLAAEVAAGKLAPEVVDEAALDARLSTA--GMPPVDLMIRTSGEKRISNFLLWQVAYAELMFLDTMWPDFRKPDLLEAIAEYQRRERRFGRTSEQ 248
BLAST of mRNA_H-paniculata_contig710.15064.1 vs. uniprot
Match: A0A4P5VVJ8_9DELT (Isoprenyl transferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A4P5VVJ8_9DELT) HSP 1 Score: 176 bits (447), Expect = 2.000e-46 Identity = 128/395 (32.41%), Postives = 161/395 (40.76%), Query Frame = 1
Query: 547 IRVPRHVAFVMDGNGRWAANKKMPRTAGHIEGSRRAAEAVEACRELGVKFVTLYAFSTENWNRPESEVSFLMNLMEKTLLDQRDGLRRGRIRLAAIGELHRLPPRLRALLQEMHEESFGETPMAAESRNEANAAEGGGAAARGERDSSTAPNGCANGDHSGSDNDFLGTRRGRSEALVLSCDATTITREPSTGKATAQGTESGLIYGQTGSDSHAEDLSSLVGARMEDDDSGRPSXXXXXXXXXXXXSARNREEERRLDYQIRLAGPPQQPDSRAAAAPIMTLCLAISYGGRAEVAAAARELAAEAAAGRLDPQDIDEDALGRRLSTARLSIPDPDLVVRTSGESRLSNLLLWQAAYTELYVVGKAWPEFRRPDLLEAFREFGRRRRRFGRTPEQ 1731
++VP HVA +MDGNGRWA ++ PR GH EG+ + +ACRELG K +TLY+FSTENW RPE EV LM L+ + L +R + IRL A+G+L RLP +RA L+E+ H+ DN M L LA+SYG R E+ AA+ LA +AA+GRL P IDE A L TA L PDPDL++RTSGE R+SN +LWQ AY E+YV WP+FR+P L+EAF FGRR RRFG T Q
Sbjct: 1 MKVPTHVAIIMDGNGRWAESRGWPRVRGHEEGAESVRDITQACRELGCKALTLYSFSTENWKRPEDEVGALMGLLARYLTQERREILDNGIRLNAVGQLDRLPLAVRAALKELM--------------------------------------------HASRDNKQ------------------------------------------------------------------------------------------------------------------MVLTLALSYGSRQEIVEAAKALAKKAASGRLRPDQIDEAAFAAELQTAGL--PDPDLLIRTSGELRISNFMLWQLAYAEIYVTETLWPDFRKPQLIEAFEAFGRRERRFGATGVQ 235 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig710.15064.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig710.15064.1 >prot_H-paniculata_contig710.15064.1 ID=prot_H-paniculata_contig710.15064.1|Name=mRNA_H-paniculata_contig710.15064.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=504bp MRGNAAAGAVGSEGAAAAAPTEEIVERNGYVNNIGQAGFKTNGGSRVGEEback to top mRNA from alignment at H-paniculata_contig710:13805..19826- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig710.15064.1 ID=mRNA_H-paniculata_contig710.15064.1|Name=mRNA_H-paniculata_contig710.15064.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6022bp|location=Sequence derived from alignment at H-paniculata_contig710:13805..19826- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig710:13805..19826- >mRNA_H-paniculata_contig710.15064.1 ID=mRNA_H-paniculata_contig710.15064.1|Name=mRNA_H-paniculata_contig710.15064.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3024bp|location=Sequence derived from alignment at H-paniculata_contig710:13805..19826- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |