|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 586 |
| Cds size | 558 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7098.15057.1 >prot_H-paniculata_contig7098.15057.1 ID=prot_H-paniculata_contig7098.15057.1|Name=mRNA_H-paniculata_contig7098.15057.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=186bp
MHSLDEYHAQNPLRSSESGSVETSKSGISQKSNNRGRFSLVTSKSYKGDF
ALESVGYDVGKEKEGEFRTTNPMFMGRGDMFSPSVAPTSPSAEGSSPTPA
VMIGSTSSSATINALNSAAAVASTAAIGPRGALGAFVNVGGVGVPGSGSG
DGSSRSPLRTAHQVESPIAMLSERTSSDSDEAADVN back to topmRNA from alignment at H-paniculata_contig7098:2619..6286- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig7098.15057.1 ID=mRNA_H-paniculata_contig7098.15057.1|Name=mRNA_H-paniculata_contig7098.15057.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3668bp|location=Sequence derived from alignment at H-paniculata_contig7098:2619..6286- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CATTGGACTTCTTCCCAGTTCGGCCGCATGCACTCTTTGGATGAGTAAGT
TGGAGTTAGAGTTCGGGATGGGGCGGGGCGGGAGACGGAATGGGGTAGGT
AAAACATGGAATCGTTCTCATATGACAAAAATGAACGACTGCTAACCATG
AAAATCCAAACAATCTTTGATTTTGCTAACTGAAGTTCTCATCACTGTAG
TAAGTTGACCCTACCACAGCCAGTTCAAGTATAAGTTTGAACCTCCATAT
AATAATTAATCTATGTTGAGGTTTTTCAGCTGACTTTGTTTGGGCAAAGG
AGGAAACCTTTGCCCAACACGTACCCCGATATTCGGATTCGTGTGTCGAT
TGCCCGAAGGTCCGACTAGACAACCTTGCGGCTGTCATGTGGGGAAGGCA
CCCTGAGCGTTCGGCCGCCCTTTGCTCAGGGTAGTGTGGGACTCGCACCC
ACTAAAACCCCCTATGTTGTTCCCTAGGTGTATTTTGGTCTTAAAAATTC
ATCTGGTTGACTCAATATTTTGGGGTCCAACCCCCCAAAACATGTGTAGG
ATTCTAATTTTGTTTCGATTGAAAAAATCGAAGATAGTGTAAGTACTGTA
CTTATTGGACAATACCAAGAGTCCCAAAAAGAGGGTCTTGTTTCGGCCGA
GTACGTGTTTTTACGGCGGGTGTTTTGGAATTGGAAAATAATAACTAATT
GGCGCCCAAAAAATGGGTTTCAACCCCAAAAAAAACATGCAGAATTCCAT
TCAAAGATGAATAAATGAATAAATGGGAGAGGTTGAAGTCCCTCTGTTAT
CATGGCTGGGTATACTTGTGAGACAGAAAGTATATACATATTTTTATAGA
GAAAAGATACCTCGTTTTTGTTACCATAAAAAAACTTTTTATAGCTGGTA
GTTGTAGAATGTGTTTTGTTGAAGTAGGTAATTCTCCAAAACCACAAGTT
TCTTGTGCTTTTACCCTTTTTTACCGTAATATGAGTATATTACCAAATTC
TTCTTTGGTTTGTAAAGCTCGTGAAGGTATTGTAGAATTTATTTGATTGA
ACCATCCTCTCGACTGTTTTCTTGTTTTCGTTCTCTCTCTTTTTTTTTTT
TCTTTTTTTTTTTTTTTATTCAATTTTCCCGGTTCTGCAACTAAATGTTT
TATTCATCGCAAGGTACCATGCACAAAACCCGCTTCGTTCATCTGAGAGT
GGCAGCGTCGAAACAAGCAAGAGTGGAATCAGCCAAAAGAGCAACAATCG
GGGCCGATTCAGTCTTGTGACGGTAAGACATGGACGGAGGATGAATTGAA
TAGATAGATGCAACTACCAGCTGGTCTCGGTACAGCGTGTACTAGTACCC
CGACATGATATACTTTTATTGACTAGTACGCGGCCGAGATTTGATGCGTC
ACCTCAACAGGGGCACGATCGAGGTCTTCTGGTGTTACAGATCTACTATC
TATGGCAACTCGACTGATTCCTGAAAGAGTTACGTGAGTCGAAAAAGTTG
CATTATACCCTGAAATGACCACGGCGACCACCTTATCATATAAAATATCA
AATGATATACAAAAAAATAACTATGTAATTTGTGCTGTGGTGTCCCAGGG
AGGCGTTTTTTCCGGGGGAGGGGGGGGTGTCATTCTCCGGCATCGTTGTT
ATTATACTGTGTAAGGTACCGGTATTTAAATTCAACTCAGCCTCTACGGA
AGTTGGATGACCTCACTGGTGCTTGACGGTACTGGCGACGTGTTATGGTC
GGTTTTATAGGGCGTTTGCTGCGTCATATCTGCAGTGTAGTACTCGAGCT
GTTTTAGTACTCATTGTCTTATGAGTAGTCGCTGCGAAAGTGATCATTTT
TGGTCTTCGCGGGCATCCGGTTCCTGATGAAATGTGCGTCCCATAAGAAG
CATTTGTTTGCAATCACGATAAAAGTTCGTGCTGTATTAACATGGTTTGA
AACAAAATATGCTCAAGCATCACAGAGAGTCAGCTCTTGTTGACACCCCC
CCCCCCCATCCCCTGTAAATATTCCACCAGAGCAAGAGCTATAAGGGCGA
CTTTGCGCTGGAGTCGGTGGGTTACGACGTCGGGAAAGAGAAGGAGGTGA
GGGTTGGCAATTTGGCTGTTGTAACTGTTCACCCCCCCCCCCCCCGTACA
AAAACGAATACTTGCAAATGGTTTTCACAAAAGAAACTGAAAGTATTTGC
CTGAGTTTCAGGATGAGCTCGTGTGTTCTGTGTGCCCCGGACCATCCACG
ATTGCTAATAATACTCGTAAATCGATTGAACAGGGGTGGGTACTTTATTT
TACGTGTCCGCTCAATTTTTGAAATTCAGGCGAAAAGTTTTTTTTTTTTT
TTTAGACCATTTGAAAGTATGCGTATCTGTCCCGGGGGGGGCTGGGGGGA
GGTAACTATTACACCTTCTGAACGAATACTTGGAACATATGTAACGAGAA
AAAGTTGAAGAAATATTGGCCTCAAGGGTCAGCATGCACACATTTATTCT
CACATGCCACTGTCTGCGATTGCTCCCGGATTACGGTCAAACGCAAAAAA
AAGAAAAGAAGGGAGGGAATCAACACTTTTTTTTTTTTTTCTAGTATGCC
TCACACAGTCTGAAACTCCGGTAAACACGTTTTGTTTTTTGTGGTGAATC
TTGGGAAGTATTCGTATTCTTTTGTGCGGGAGGAGAGCTATTGCGTAAGG
TTTATGACCTAGCTATAGCTATTCTAGCGTCGGAAAGTTGTTCGGAAAGA
AACGGACTTGTGACTGGAATAATTGTGAAAACGCCGCAGTCGTTGTTCGG
AGAACCGTGCCAGTGACCTGTCTGTACTCTTCGTTTACTCTCCCTACTGG
ACTGCCTGCCTCAACAGCCGCGGCTTTCTACCTCACGGGTATTTTGTTAT
AAACTTCGTTTCTCTTGTTCCCGGGGAGGGTGGATTCGCAAATTATATCG
AAAGCCTAATTTTTATAGACGGTGGTTATTGCCATCGGGTTGTGTCGAGG
CTTTATCTACCATCGTCGTTGACTATTATTCGGACAAGTATGTTGACGTT
CATGCTACGGACCAGGGCACGGGAAACACAGGGAAAAACGTGCCCAGAAA
CGCTCTCTCCAGCAAACACTCAATTCTTGTTTTTGAACAGAATCTTCCTT
TTTGTCAAAAGATTAAAATAATTTTTTTCCCCCTTTTGGACTTAATTTGC
TGATATAATTTAAGGTCAGTCGCATAATCTCAGCAATTTTTTTACCCTCT
CCCACATAATTGCTGGAAAATTCAATCTTACCACACACTGGATACTACAC
AGGGAGAATTCAGGACTACGAACCCCATGTTCATGGGACGCGGGGATATG
TTTAGCCCGTCTGTCGCCCCAACGAGTCCCTCCGCAGAAGGGTCCTCCCC
GACGCCCGCGGTCATGATAGGCTCCACCTCTTCGTCGGCCACCATCAACG
CTCTCAATTCGGCAGCCGCCGTGGCAAGCACGGCGGCCATCGGCCCACGA
GGCGCGCTCGGTGCTTTCGTCAACGTCGGCGGCGTGGGCGTCCCCGGCAG
CGGCAGCGGCGACGGGAGCTCGCGGTCTCCGCTGCGCACAGCCCACCAGG
TGGAGTCGCCGATCGCCATGCTCTCCGAGCGCACGTCCAGCGACTCCGAC
GAAGCGGCGGACGTGAAT back to topCoding sequence (CDS) from alignment at H-paniculata_contig7098:2619..6286- >mRNA_H-paniculata_contig7098.15057.1 ID=mRNA_H-paniculata_contig7098.15057.1|Name=mRNA_H-paniculata_contig7098.15057.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1116bp|location=Sequence derived from alignment at H-paniculata_contig7098:2619..6286- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCACTCTTTGGATGAATGCACTCTTTGGATGAGTACCATGCACAAAAC
CCGCTTCGTTCATCTGAGAGTGGCAGCGTCGAAACAAGCAAGAGTGGAAT
CAGCCAAAAGAGCAACAATCGGGGCCGATTCAGTCTTGTGACGGTACCAT
GCACAAAACCCGCTTCGTTCATCTGAGAGTGGCAGCGTCGAAACAAGCAA
GAGTGGAATCAGCCAAAAGAGCAACAATCGGGGCCGATTCAGTCTTGTGA
CGAGCAAGAGCTATAAGGGCGACTTTGCGCTGGAGTCGGTGGGTTACGAC
GTCGGGAAAGAGAAGGAGAGCAAGAGCTATAAGGGCGACTTTGCGCTGGA
GTCGGTGGGTTACGACGTCGGGAAAGAGAAGGAGGGAGAATTCAGGACTA
CGAACCCCATGTTCATGGGACGCGGGGATATGTTTAGCCCGTCTGTCGCC
CCAACGAGTCCCTCCGCAGAAGGGTCCTCCCCGACGCCCGCGGTCATGAT
AGGCTCCACCTCTTCGTCGGCCACCATCAACGCTCTCAATTCGGCAGCCG
CCGTGGCAAGCACGGCGGCCATCGGCCCACGAGGCGCGCTCGGTGCTTTC
GTCAACGTCGGCGGCGTGGGCGTCCCCGGCAGCGGCAGCGGCGACGGGAG
CTCGCGGTCTCCGCTGCGCACAGCCCACCAGGTGGAGTCGCCGATCGCCA
TGCTCTCCGAGCGCACGTCCAGCGACTCCGACGAAGCGGCGGACGTGAAT
GGAGAATTCAGGACTACGAACCCCATGTTCATGGGACGCGGGGATATGTT
TAGCCCGTCTGTCGCCCCAACGAGTCCCTCCGCAGAAGGGTCCTCCCCGA
CGCCCGCGGTCATGATAGGCTCCACCTCTTCGTCGGCCACCATCAACGCT
CTCAATTCGGCAGCCGCCGTGGCAAGCACGGCGGCCATCGGCCCACGAGG
CGCGCTCGGTGCTTTCGTCAACGTCGGCGGCGTGGGCGTCCCCGGCAGCG
GCAGCGGCGACGGGAGCTCGCGGTCTCCGCTGCGCACAGCCCACCAGGTG
GAGTCGCCGATCGCCATGCTCTCCGAGCGCACGTCCAGCGACTCCGACGA
AGCGGCGGACGTGAAT back to top
|