mRNA_H-paniculata_contig7069.15029.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig7069.15029.1
Unique NamemRNA_H-paniculata_contig7069.15029.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig7069.15029.1 vs. uniprot
Match: D7FUX7_ECTSI (NAC-A/B domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUX7_ECTSI)

HSP 1 Score: 302 bits (773), Expect = 7.840e-98
Identity = 171/196 (87.24%), Postives = 180/196 (91.84%), Query Frame = 2 
Query:   98 MTEFEEAKVAADPEVEDIDXXXXXXXXIPELEEQVGGDDSVEPKGGKQNRNEKKARKAVQKLGMKPVPSIVRVTVKKSKNILFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSQPEASAAAAAASVPAVNSGADIDGDELVDETGVEPKDIELIMSQATCSRSAAVQALKKNDMDIVNAIMELTMD 685
            MTEFEEAKV ADPEVEDI+        IPELEEQVGGDDS EPKGGKQNRNEKKARKAVQKLGMK VPSI+RVTVKKSKNILFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFS PEA+AA+AAA +PAVN+GAD+D DELVDETGVEPKDIELIMSQA+C+RSAAV ALKKND DIVNAIMELTMD
Sbjct:    1 MTEFEEAKVVADPEVEDIEGDSDDD--IPELEEQVGGDDSAEPKGGKQNRNEKKARKAVQKLGMKAVPSIMRVTVKKSKNILFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSAPEAAAASAAA-IPAVNTGADVDTDELVDETGVEPKDIELIMSQASCTRSAAVNALKKNDGDIVNAIMELTMD 193
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BLAST of mRNA_H-paniculata_contig7069.15029.1 vs. uniprot
Match: A0A7S0FF21_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0FF21_9DINO)

HSP 1 Score: 188 bits (478), Expect = 1.340e-53
Identity = 121/198 (61.11%), Postives = 143/198 (72.22%), Query Frame = 2 
Query:  116 AKVA----ADPEVEDIDXXXXXXXXIPELEEQVGGDDSVEPKGGKQNRNEKKARKAVQKLGMKPVPSIVRVTVKKSKNILFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSQPEASAAAAAASVPA--VNSGADID----GDELVDETGVEPKDIELIMSQATCSRSAAVQALKKNDMDIVNAIMELT 679
            AKVA    A+ EV+  D        +P LE     DDS +   GKQNR+EKK+RKAVQKLGMKPVP IVRVTVKKSKNILFVISKPDVHKSP+S+TY++FGEAKIEDLSAQAQ  AA++F+Q  A  AA+ A  PA     G  I+    GD   DETG+EPKDIEL+MSQ +CSR+ AVQAL+ N+ DIV AIM L+
Sbjct:    9 AKVAENAEAEAEVDSGDDSDSTDEDMPNLE---NTDDSKKEDRGKQNRSEKKSRKAVQKLGMKPVPGIVRVTVKKSKNILFVISKPDVHKSPNSDTYIVFGEAKIEDLSAQAQASAAQQFTQQSAEPAASGAGEPAERAEQGPKIEEVEEGD--ADETGIEPKDIELVMSQVSCSRAKAVQALRSNNNDIVEAIMMLS 201
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BLAST of mRNA_H-paniculata_contig7069.15029.1 vs. uniprot
Match: A0A7S0I6J4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I6J4_9EUKA)

HSP 1 Score: 187 bits (474), Expect = 3.450e-53
Identity = 114/170 (67.06%), Postives = 131/170 (77.06%), Query Frame = 2 
Query:  179 IPELEEQVGGDDSVEPKGGKQNRNEKKARKAVQKLGMKPVPSIVRVTVKKSKNILFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSQPEASAAAAA--ASVPAVNSGADIDGDELVDETGVEPKDIELIMSQATCSRSAAVQALKKNDMDIVNAIMELTM 682
            +PELE   GGDD   P   KQ+R+EKK+RKA+QKLGMKPVP I+RVTVKKSKNILFVISKPDV KSP+S+T++IFGEAKIEDLSAQAQ  AAE+F  PE      A  A  P +    +ID    VDE+GVEPKD+EL+MSQA  SRS AV+ALK ND DIVNAIMELTM
Sbjct:   27 MPELENAEGGDD---PSKAKQSRSEKKSRKAMQKLGMKPVPGIMRVTVKKSKNILFVISKPDVFKSPASDTFIIFGEAKIEDLSAQAQTAAAEQFKAPEVPKPELANKAEKPTIE---EIDDGAEVDESGVEPKDVELVMSQAGVSRSKAVKALKTNDGDIVNAIMELTM 190
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BLAST of mRNA_H-paniculata_contig7069.15029.1 vs. uniprot
Match: A0A6U2NW63_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2NW63_9STRA)

HSP 1 Score: 185 bits (469), Expect = 1.460e-52
Identity = 116/191 (60.73%), Postives = 138/191 (72.25%), Query Frame = 2 
Query:  125 AADPEVEDIDXXXXXXXXIPELEEQV------GGDDSVEPKGGKQNRNEKKARKAVQKLGMKPVPSIVRVTVKKSKNILFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSQPEASAAAAAASVPAVNSGADIDGDELVDETGVEPKDIELIMSQATCSRSAAVQALKKNDMDIVNAIMELT 679
            A  PE+ D D        +PELEEQ       G D   + + GKQNR EKKARKA+QKLGM+PVP ++RVTVKKSKN+LFVI KPDV KSP+++ YV+FGEAK EDLSAQ Q QAA++F  P   AAAAAA  PAV      D DE +DETGVE KDIEL+MSQA CSR+ AV+ALK+ND D+VN+IM LT
Sbjct:    3 AEPPEILDSDDD------VPELEEQTEEVPTPGADAGGDAEEGKQNRAEKKARKAMQKLGMRPVPGVMRVTVKKSKNVLFVIQKPDVFKSPNADAYVVFGEAKSEDLSAQNQAQAAKQFRVPPTEAAAAAA--PAVAE----DADEALDETGVEAKDIELVMSQAGCSRARAVKALKENDGDLVNSIMSLT 181
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BLAST of mRNA_H-paniculata_contig7069.15029.1 vs. uniprot
Match: A0A7S0FEZ6_9DINO (Hypothetical protein n=2 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0FEZ6_9DINO)

HSP 1 Score: 182 bits (461), Expect = 7.410e-51
Identity = 111/172 (64.53%), Postives = 130/172 (75.58%), Query Frame = 2 
Query:  179 IPELEEQVGGDDSVEPKGGKQNRNEKKARKAVQKLGMKPVPSIVRVTVKKSKNILFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSQPEASAA-----AAAASVPAVNSGADIDGDELVDETGVEPKDIELIMSQATCSRSAAVQALKKNDMDIVNAIMELT 679
            +P LE   G   S + +  KQNR+EKK+RKAVQKLGMKPVP IVRVTVKKSKNILFVISKPDVHKSP+S+TY++FGEAKIEDLSAQAQ  AA++F+Q  A AA     A  A  P +    D D    VDETG+EPKDIEL+MSQ +CSR+ AVQALK N+ DIV AIM L+
Sbjct:   55 MPNLENTDG---SKKEERSKQNRSEKKSRKAVQKLGMKPVPGIVRVTVKKSKNILFVISKPDVHKSPNSDTYIVFGEAKIEDLSAQAQASAAQQFTQHSAEAAIEPKEAVKADAPKIEEVEDGD----VDETGIEPKDIELVMSQVSCSRAKAVQALKSNNNDIVEAIMMLS 219
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BLAST of mRNA_H-paniculata_contig7069.15029.1 vs. uniprot
Match: A0A7S3HZQ4_9SPIT (Hypothetical protein (Fragment) n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3HZQ4_9SPIT)

HSP 1 Score: 181 bits (458), Expect = 1.000e-50
Identity = 110/168 (65.48%), Postives = 130/168 (77.38%), Query Frame = 2 
Query:  185 ELEEQVGGDDSVEPKGGKQNRNEKKARKAVQKLGMKPVPSIVRVTVKKSKNILFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSQPEASAA--AAAASVPAVNSGADIDGDELVDETGVEPKDIELIMSQATCSRSAAVQALKKNDMDIVNAIMELTM 682
            ELE   GGD        KQ+R+EKK+RKA+QKLGMKPVP I+RVTVKKSKNILFVI+KPDV KSP+S+TY+IFGEAKIEDLSAQAQQQAAE+F +P  +    A  A  P +    +I+ D  +DETGVEPKD+EL+MSQA   R+ AV+ALK ND DIVNAIMELTM
Sbjct:   35 ELEAAEGGDGDAARV--KQSRSEKKSRKAMQKLGMKPVPGIMRVTVKKSKNILFVIAKPDVFKSPASDTYIIFGEAKIEDLSAQAQQQAAEQFKEPVMAKPEMAKVAQKPVIE---EIEADGEIDETGVEPKDVELVMSQAGVPRARAVKALKMNDGDIVNAIMELTM 197
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BLAST of mRNA_H-paniculata_contig7069.15029.1 vs. uniprot
Match: A0A7S4WFG2_9DINO (Hypothetical protein n=2 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4WFG2_9DINO)

HSP 1 Score: 180 bits (457), Expect = 1.410e-50
Identity = 112/172 (65.12%), Postives = 131/172 (76.16%), Query Frame = 2 
Query:  179 IPELEEQVGGDDSVEPKGGKQNRNEKKARKAVQKLGMKPVPSIVRVTVKKSKNILFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSQPEASA-----AAAAASVPAVNSGADIDGDELVDETGVEPKDIELIMSQATCSRSAAVQALKKNDMDIVNAIMELT 679
            +P LE     D S + + GKQNR+EKK+RKAV KLGMKPV  IVRVTVKKSKNILFVISKPDVHKSP+S+TY++FGEAKIEDLSAQAQ  AA++F+Q  A A     AAA A  P +    D  GD  VDE+GVEPKDIEL+MSQA C+R+ AVQALK N  DIV AIM+L+
Sbjct:   32 MPNLE---NADGSKKEERGKQNRSEKKSRKAVAKLGMKPVSGIVRVTVKKSKNILFVISKPDVHKSPNSDTYIVFGEAKIEDLSAQAQASAAQQFTQQSAEALAEPAAAAKADAPKIEEVEDT-GD--VDESGVEPKDIELVMSQAGCTRAKAVQALKSNSNDIVEAIMQLS 197
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BLAST of mRNA_H-paniculata_contig7069.15029.1 vs. uniprot
Match: A0A7S2V7B3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7B3_9STRA)

HSP 1 Score: 178 bits (452), Expect = 8.400e-50
Identity = 120/202 (59.41%), Postives = 137/202 (67.82%), Query Frame = 2 
Query:  113 EAKVAADPEVEDIDXXXXXXXXIPELEEQV-------GGDDSVEPKG-GKQNRNEKKARKAVQKLGMKPVPSIVRVTVKKSKNILFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSQPEASAAAAAASVPAVNSGADIDGDELVDET----GVEPKDIELIMSQATCSRSAAVQALKKNDMDIVNAIMELTM 682
            E  V   P VED+D        +P+LEEQ        G D    P G GKQNR+EKK+RKA+QKLGM+PVP I+RVTVKKSKNILFVISKPDV KSPSS+T++IFGEAKIEDLSAQAQ  AAE+F  PEASAA     VP                     GVEPKDIEL+MSQA  +R+ AV+ALKKN+ DIVNAIMELTM
Sbjct:    8 EEPVQEKPVVEDVDEDSDE---MPDLEEQPEGAAPAGGADAEAGPAGSGKQNRSEKKSRKAMQKLGMRPVPGIIRVTVKKSKNILFVISKPDVFKSPSSDTHIIFGEAKIEDLSAQAQSAAAEQFRTPEASAA-----VPPXXXXXXXXXXXXXXXXXXXXGVEPKDIELVMSQAGVTRAKAVKALKKNEGDIVNAIMELTM 201
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BLAST of mRNA_H-paniculata_contig7069.15029.1 vs. uniprot
Match: A0A7S1FAV2_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FAV2_NOCSC)

HSP 1 Score: 177 bits (449), Expect = 1.500e-49
Identity = 105/158 (66.46%), Postives = 125/158 (79.11%), Query Frame = 2 
Query:  209 DDSVEPKGGKQNRNEKKARKAVQKLGMKPVPSIVRVTVKKSKNILFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSQPEASAA-AAAASVPAVNSGADIDGDELVDETGVEPKDIELIMSQATCSRSAAVQALKKNDMDIVNAIMELT 679
            D+  E   GKQNR+EKK+RKAVQKLGMKPVP I RVTVKKSKNILFVISKPDVHKS +S+TY++FGEAKIEDLSAQAQ  AAE+F+Q  A+A     A+ P V    ++D D   DETG+EPKDIEL+MSQ +CSRS AV AL+ N+ DIV AIM+L+
Sbjct:   32 DEKGEGGSGKQNRSEKKSRKAVQKLGMKPVPGITRVTVKKSKNILFVISKPDVHKSQNSDTYIVFGEAKIEDLSAQAQASAAEQFTQSNAAAFDPETAAQPTVE---EVDEDS-ADETGIEPKDIELVMSQVSCSRSKAVSALRANNNDIVEAIMQLS 185
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BLAST of mRNA_H-paniculata_contig7069.15029.1 vs. uniprot
Match: A0A5D6XNW0_9STRA (NAC-A/B domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNW0_9STRA)

HSP 1 Score: 176 bits (446), Expect = 4.530e-49
Identity = 108/168 (64.29%), Postives = 129/168 (76.79%), Query Frame = 2 
Query:  179 IPELEEQVGGDDSVEPKGGKQNRNEKKARKAVQKLGMKPVPSIVRVTVKKSKNILFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSQPEASAAAAAASVPAVNSGADIDGDELVDETGVEPKDIELIMSQATCSRSAAVQALKKNDMDIVNAIMELTM 682
            IP LEE  GGDD+   + GK NR+EKKARKA+QKLG+KPV  I+RVT+KKSK+ILFVISKPDV KS  S+TYVIFGEAKIEDL+AQAQQ AA++F  PEA  AAA  +   V   AD      VDE+G++ KDI+L+MSQA  S++ AV AL+ ND DIVNAIMELTM
Sbjct:   29 IPALEE-AGGDDA---EAGKNNRSEKKARKAMQKLGLKPVSGIIRVTIKKSKSILFVISKPDVFKSAVSDTYVIFGEAKIEDLNAQAQQMAAQQFKAPEADEAAAGGAT--VQDVADDXXXXXVDESGIDAKDIQLVMSQAGVSKAKAVAALRSNDNDIVNAIMELTM 190
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7069.15029.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUX7_ECTSI7.840e-9887.24NAC-A/B domain-containing protein n=2 Tax=Ectocarp... [more]
A0A7S0FF21_9DINO1.340e-5361.11Hypothetical protein n=1 Tax=Pyrodinium bahamense ... [more]
A0A7S0I6J4_9EUKA3.450e-5367.06Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
A0A6U2NW63_9STRA1.460e-5260.73Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S0FEZ6_9DINO7.410e-5164.53Hypothetical protein n=2 Tax=Pyrodinium bahamense ... [more]
A0A7S3HZQ4_9SPIT1.000e-5065.48Hypothetical protein (Fragment) n=2 Tax=Choreotric... [more]
A0A7S4WFG2_9DINO1.410e-5065.12Hypothetical protein n=2 Tax=Alexandrium monilatum... [more]
A0A7S2V7B3_9STRA8.400e-5059.41Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1FAV2_NOCSC1.500e-4966.46Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A5D6XNW0_9STRA4.530e-4964.29NAC-A/B domain-containing protein n=1 Tax=Pythium ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7069contigH-paniculata_contig7069:5897..10934 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score305.4
Seed ortholog evalue1.9e-80
Seed eggNOG ortholog2880.D7FUX7
KEGG koko:K03626
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005829,GO:0005840,GO:0005854,GO:0005911,GO:0006457,GO:0006458,GO:0006950,GO:0006970,GO:0008150,GO:0009506,GO:0009628,GO:0009651,GO:0009987,GO:0012505,GO:0022626,GO:0030054,GO:0032991,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0050896,GO:0051082,GO:0051083,GO:0055044,GO:1990904
EggNOG free text desc.protein transport
EggNOG OGsCOG1308@1,KOG2239@2759
Ec32 ortholog descriptionNascent polypeptide-associated complex NAC domain
Ec32 orthologEc-01_008570.1
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons5
Model size1491
Cds size591
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930854.014744-UTR-H-paniculata_contig7069:5896..59931622930854.014744-UTR-H-paniculata_contig7069:5896..5993Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7069 5897..5993 +
1691481482.2671258-UTR-H-paniculata_contig7069:5896..59931691481482.2671258-UTR-H-paniculata_contig7069:5896..5993Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7069 5897..5993 +
1622930854.106317-UTR-H-paniculata_contig7069:10131..109341622930854.106317-UTR-H-paniculata_contig7069:10131..10934Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7069 10132..10934 +
1691481482.3458064-UTR-H-paniculata_contig7069:10131..109341691481482.3458064-UTR-H-paniculata_contig7069:10131..10934Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7069 10132..10934 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930854.0292065-CDS-H-paniculata_contig7069:5993..60411622930854.0292065-CDS-H-paniculata_contig7069:5993..6041Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7069 5994..6041 +
1691481482.278529-CDS-H-paniculata_contig7069:5993..60411691481482.278529-CDS-H-paniculata_contig7069:5993..6041Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7069 5994..6041 +
1622930854.0416574-CDS-H-paniculata_contig7069:6499..65771622930854.0416574-CDS-H-paniculata_contig7069:6499..6577Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7069 6500..6577 +
1691481482.2874773-CDS-H-paniculata_contig7069:6499..65771691481482.2874773-CDS-H-paniculata_contig7069:6499..6577Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7069 6500..6577 +
1622930854.0576158-CDS-H-paniculata_contig7069:8697..89491622930854.0576158-CDS-H-paniculata_contig7069:8697..8949Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7069 8698..8949 +
1691481482.2966704-CDS-H-paniculata_contig7069:8697..89491691481482.2966704-CDS-H-paniculata_contig7069:8697..8949Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7069 8698..8949 +
1622930854.0717762-CDS-H-paniculata_contig7069:9626..97491622930854.0717762-CDS-H-paniculata_contig7069:9626..9749Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7069 9627..9749 +
1691481482.307311-CDS-H-paniculata_contig7069:9626..97491691481482.307311-CDS-H-paniculata_contig7069:9626..9749Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7069 9627..9749 +
1622930854.0877104-CDS-H-paniculata_contig7069:10041..101311622930854.0877104-CDS-H-paniculata_contig7069:10041..10131Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7069 10042..10131 +
1691481482.3262765-CDS-H-paniculata_contig7069:10041..101311691481482.3262765-CDS-H-paniculata_contig7069:10041..10131Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7069 10042..10131 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7069.15029.1prot_H-paniculata_contig7069.15029.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig7069 5994..10131 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig7069.15029.1

>prot_H-paniculata_contig7069.15029.1 ID=prot_H-paniculata_contig7069.15029.1|Name=mRNA_H-paniculata_contig7069.15029.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=197bp
MTEFEEAKVAADPEVEDIDDDDDSDDDIPELEEQVGGDDSVEPKGGKQNR
NEKKARKAVQKLGMKPVPSIVRVTVKKSKNILFVISKPDVHKSPSSNTYV
IFGEAKIEDLSAQAQQQAAERFSQPEASAAAAAASVPAVNSGADIDGDEL
VDETGVEPKDIELIMSQATCSRSAAVQALKKNDMDIVNAIMELTMD*
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mRNA from alignment at H-paniculata_contig7069:5897..10934+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig7069.15029.1 ID=mRNA_H-paniculata_contig7069.15029.1|Name=mRNA_H-paniculata_contig7069.15029.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5038bp|location=Sequence derived from alignment at H-paniculata_contig7069:5897..10934+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGTTAGCACTTCTCTCTCCCTGTCTCTCTCGGTCTCTGCGTCCAGG
TCCTCTTGCCTCAAGCAACTCCCCGGTTTCCTACGGTATAGAGAAATATG
ACGGAGTTCGAGGAGGCTAAGGTTGCGGCTGACCCTGAGGTCGAGGTGAG
GTATCACATCACACTGATTTTTTGTCTGGCTCTGCCTCTCTCGCTGCTCC
AGCTGCTCAGTGCCTCCCTCTGTGGCCTGTACAGCATGTCGGGGATTATG
GTCTCACAATGCCCGTTCGCCCGTTCTTGCGTCGTTGCCCTGTCCCATGT
TGCGCTAGAGCTAGGGTACTGGGCAAGCAAGACGTAGAAGAGTGTTTGAC
ATGCATGTGTTTCTTATCTGCTGTGATCGATTTTGCGGCCAGTCTGCCAA
AGCATGTCTACATACCTTATTTCACTCAACATTCGACGCGTATCAAAGTA
CCCCGTCCTTTGCATGTACTGGAGTTAGTACTGGCTTAGACTCTTGGAGC
GGGTCGGACTTCGTACTACGTGTGTTCGCCTGGCCGTCCGCTTAGCGTTA
CACGGTACTGCGTTATTGCCCGTTTTCTGTATTGGTGGGAATGCGATTGT
CAGGACATCGACGACGATGATGACTCGGACGACGACATTCCGGAGTTGGA
AGAACAGGTTGGCGGCGACGACTCGGTGGAGGTATGGCGCCAGGACACAA
AAATTTTCCTGTAACACCCTTGCAGTATATATTTCCCAACCCATGTCAAC
GTTAACGCTCCCGTCATGCTCCAAAATGAAAACGGTAGGATGAAATATGA
ATGGTGTTGCCAGAGCAGTCAATATTGGCTTTTCTGCAAGTTTAGGAAAG
ATGGAAATCAAGTGTACATTCTTGAATCTGCTGCACCAAACGTTGTAGTG
TAAAATTTGGCATTAGCGAGTGTCCCCGTTTATACCTATCAGAGGTAGGT
CTTGATCGGTTCAAGGGCGAGAAGTCGTGGAAGCCATCGTGTCGTGCACT
GCTGTCTGTGTGGTGGTCGTTTCAAGGCAGGAGTAAGCTGGATGGCTCAT
GGTTACCATACAGCTGCTGTGCCTCTGAGGCAGTGCGTGCGTGTATGTGT
TTCCTTGGGGGGTTGCACACTTGTCCAAATAAGCATATACTAAAAACGAT
GGAAAAAATTGAGGGGTTCGGGAAAAGATGGAGGTCTCTGTCTAAATAAG
TGATATAAAAAATCGAAGATGAGTCGAGAATTTTATCCATGATTCCCTTT
CGCGATCTCCTCGTTGTGATCAACGAGAGCTGCGCTATTTTTTGTTTCCT
GCGTAAGATACACTTTCATTACAGCACGACACCAAAACAGACGTTTTACA
GGCAGTCTACATCATACAGGCAAGCGAGCTTGATGGAGGTTATATTGCTG
ACCACATGGAATTAGATAGGTGTACCCTGTGGTCTTGCGTAGCTTGCAAG
CGACAACAGGTCAAGAGCAGGCATTGTGATTAACATCGTTCCTCATCGTA
CGTGACTCGATGTTGGGTATTTGAAAGCTCCTTTGTGCCACGATAGAACG
TTGTTGGACCAAAAGCCTGGCCCTGATTGAAAATCGGTTTGCATAGCCTC
GTGGGAGCCTGGGACGTTGTTCCTAGTCCCCAAACTAGGCACTACATGTC
ATGAACATGTTGCAGTACTCCGAGTTGTATCGGTGACCTCCAGTACGAGG
CAGGTGGAGGGACATTCGTTGGATGCATGATGTTGTTGACACATTTTTGG
ATTCGAACTCCTACGGATGACCTGGTGGTGCACTGTCCGTCTGTATCGCA
AAATGTTTTTTCAAATATAAGGCCGACCCGTAGGAGCACGTGAAGATATC
TTGCCGTACGAAAGCATTGAAGCTCGTTACTATATTTACCTAGGGTGTTG
AACAACCACTTGTGTGTCGTAGTTCTTCCTGTAGTCACCATTCACGACAG
GGCACATAGACTAATCGCCTCCCACAGTATTTGCCACCCCTTCTTTCCAA
GCGGGGTAAGGAATTATCTACGTTTACCCAGTTGGCGAAGGCGCTGAAAG
CTAGGCAGGCATATAGTCGACTGTTGGACCACCAGAATATGGGCACACCA
CTTGCCGAGAAAAAATGTCGATGTTCGGACCTTAATGAAGTCGACCTCTG
AGAGTGATGCGATAAGTCGTCAGATTCGCTCATCATGTTGGCTGTCCTTC
GGCACTTTCTTTATTGACAACCGGTGATACTAACCGTTGTTGCAATATCA
CAGGTAAAACATTTTGCTGCTGGATGATGTGCCTCTTTTTACCTTGAACG
AATTTCCCCGGGGTAGGAAAAAAGCCAGAGTTCTCGATGTATAATTGGAG
CTGAGAACTGCCTTGATGGTCATACTATATAAGCGACTACAGTACAGGTG
TCTCTATCCCTTTCGCCCTCTTACCCGGAAACGTGCTTGTCATGGTTTCC
TTCTTCTTTTTCTTTTTTTCATGTCCTCATCGTTCCGTCGGCATTCGCCA
CTTTCGAACCATGATTGAAGAGTTGCATCCTATTTATGTCGAGAATGAAA
AGTTTCTCGAGCGTTCGTAAGGAATGCAAGGAAACAATTACTGCGATCGA
ATGCATCCCGAGGTCGGACATAATCTGCTTTCGGTGTATGGGTCTGTTTT
TCCCACCAGCAGATCTCATACGAAATCGTCTTATGCAGAAATGGTCGCAC
GCGTGTCGACATTTTTCACCTGGATAAGAGTACGAAACACACCGCCCTCG
TCCTTCGCATCTTATTCTTGTACTACTACGGACCCCCCGATCGCAAAACA
GCCCAAGGGAGGAAAGCAAAACCGCAACGAGAAGAAGGCACGAAAGGCGG
TGCAGAAGCTGGGCATGAAGCCTGTCCCGTCGATCGTGCGCGTGACGGTA
AAGAAAAGCAAGAACATCTTGTTTGTCATTTCAAAGCCGGATGTGCACAA
GAGCCCGTCCTCAAACACCTACGTCATCTTCGGCGAGGCCAAAATAGAGG
ACCTCTCGGCCCAGGCGCAGCAGCAAGCGGCAGAGCGATTCAGCCAGCCG
GAGGTGAGGTAGTATTCCGATGGGAGAAGCGGTGTGTTATATAGCGTGGT
GGTCGTGATACAGACGATCCTGACAAGCAGAGACGTACATGTCTGTTCGT
GCTGCTTACAAGTGCGCATTCGATCAGGTTTGTTATTCACTAATGTATCG
ATGATGAATTAATTGTGTGGTTGTTTCTGTTTTCTCGAATATCATGAAAC
GTTCAACGTCGAGACAGCGCTGGAAACAGATGGAACCTTGAACTGTAAAA
TTGGTTCGCTGCTGCTTCTACTCTGTGTTTAGTTGGGCCGGTCGTTGCGC
ACCAACCTTTTGATCTCAAGGTCACAGTGATCATGAGAGATGTAGAGCCG
CCTTTAAGAACAAGGCGATGGACCGCTCAATTGTCGAGTATCTACTTACA
CGGCTTGTAAAACTAGGAGTTTAGTGTTTCCCACTAACAGCACCCTTTCG
TCCCAGAGATGACATTCGCACAGGATCAATTATTGTTGGATTTGTTCTGC
TGCGTGAGTGTGTCACCGATTTGTAGCAAATAGGTGGATGCCTTGACGTC
TGAGTGCGTGACGTTGTTTATGTCGTGGTTTAGGAAGAAACGCTAGGAAT
TCCCCAGAAGGTTTCAGTGAAAAGAAGGGTGAAGCGCTAACCTATACTGT
TCTGTTTTCTATTTGGCTTTTTCTCTGTAGGCATCGGCGGCAGCCGCGGC
AGCATCCGTACCAGCAGTGAACTCTGGGGCGGACATTGACGGGGACGAGC
TGGTGGACGAGACGGGAGTAGAGCCGAAAGACATCGAGCTCATCATGAGC
CAGGTTGGTGACTGTTTAGTGCTGAAAATATTTTGCCAATTTGGATGCGA
AACAAGAATACGCGCAGAGAGGTGCTCTCCCGGATACTTTTCTGAGTTAA
ACATTAGCTGTTCCATCCTTCGATGTCGAGTCCAACCCTTTCATGACGAT
TTATCGCGCTGTGTTGACAGCCATGTCTACGTCTTAACAAATTGTAATTG
GAATCAGAGTCTCATCCCGTTTTGTCTTCTAGTTAGAGGCGTGCGTGGAT
ATCACCGCTGAGCTCCCATCAATACCTTTCCACATTGCCCACCAGGCGAC
GTGCTCTCGATCAGCGGCGGTGCAAGCGCTGAAGAAGAACGACATGGACA
TCGTAAATGCCATCATGGAGCTCACCATGGACTGAGACGCTAAATAGTAC
TCGTTGTAGAAAGAGGTTTGCGCATTTTGGAGTGGAACTGATTTGCTGCA
CCTTTCAATATATCACGTTGTTGTTTCTTTTGGTTATGTCTTGGAGAACC
GGAACAGAGAATTTGAGAGGGAAAACATGGGGGAGAGTAGGCGGGAGAGG
GTAATAAAATACGACCTCCCATACCTGATGACAATTTGGTTTTTTTCTTG
TCTGAAGTGGCACGACTAATGTCGCCTTCAGTGCCATGATACCTTAACTG
GGTCTTTTTCAGGGGCAACGAGAAAACATCCGATGGATTGTATTCGCTCC
ACGTGATGAATAGTTGCCCACGTCCCTGCTACGTAGCTCATGCCGCAGAT
AGTGTGTGCTGACCAGCGAAGCTGGTAATGTGGCTTGGTGTTTAGCCTAT
CTTCCGCGCCTCTCGTGTGTGTTATCCCTGGCATTCTGAGAACAAGAGAA
ACAGCCGGTGTGGGAAAACAGCAAACGAATGAAGAATTATTCGCGTTGTT
TGCCTGAATTTAAGAGTGCGCTCGTGTATTTTGGTGCCCAGGTCCATATT
CGACTTCTGGTAATAATCGTAAATCGAACGGACAGGGATGGGTACTTCAC
TCCCATGTTTCCGTTCATTCGTAAGCTTAGACGAACAGTTTTGACTTCTT
GTGAAAATGCCAAGTATTTGTATTCGTTCGTGGCGTTAAAGAATTACGGA
GCCTTTCAAATATCGTATGGCATTAGATCAACCCTGAATAATTATCATGC
AATTACAAAGTCCTCAATATATCTGATGGAAGAAACAG
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Coding sequence (CDS) from alignment at H-paniculata_contig7069:5897..10934+

>mRNA_H-paniculata_contig7069.15029.1 ID=mRNA_H-paniculata_contig7069.15029.1|Name=mRNA_H-paniculata_contig7069.15029.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1182bp|location=Sequence derived from alignment at H-paniculata_contig7069:5897..10934+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACGGAGTTCGAGGAGGCTAAGGTTGCGGCTGACCCTGAGGTCGAGAT
GACGGAGTTCGAGGAGGCTAAGGTTGCGGCTGACCCTGAGGTCGAGGACA
TCGACGACGATGATGACTCGGACGACGACATTCCGGAGTTGGAAGAACAG
GTTGGCGGCGACGACTCGGTGGAGGACATCGACGACGATGATGACTCGGA
CGACGACATTCCGGAGTTGGAAGAACAGGTTGGCGGCGACGACTCGGTGG
AGCCCAAGGGAGGAAAGCAAAACCGCAACGAGAAGAAGGCACGAAAGGCG
GTGCAGAAGCTGGGCATGAAGCCTGTCCCGTCGATCGTGCGCGTGACGGT
AAAGAAAAGCAAGAACATCTTGTTTGTCATTTCAAAGCCGGATGTGCACA
AGAGCCCGTCCTCAAACACCTACGTCATCTTCGGCGAGGCCAAAATAGAG
GACCTCTCGGCCCAGGCGCAGCAGCAAGCGGCAGAGCGATTCAGCCAGCC
GGAGCCCAAGGGAGGAAAGCAAAACCGCAACGAGAAGAAGGCACGAAAGG
CGGTGCAGAAGCTGGGCATGAAGCCTGTCCCGTCGATCGTGCGCGTGACG
GTAAAGAAAAGCAAGAACATCTTGTTTGTCATTTCAAAGCCGGATGTGCA
CAAGAGCCCGTCCTCAAACACCTACGTCATCTTCGGCGAGGCCAAAATAG
AGGACCTCTCGGCCCAGGCGCAGCAGCAAGCGGCAGAGCGATTCAGCCAG
CCGGAGGCATCGGCGGCAGCCGCGGCAGCATCCGTACCAGCAGTGAACTC
TGGGGCGGACATTGACGGGGACGAGCTGGTGGACGAGACGGGAGTAGAGC
CGAAAGACATCGAGCTCATCATGAGCCAGGCATCGGCGGCAGCCGCGGCA
GCATCCGTACCAGCAGTGAACTCTGGGGCGGACATTGACGGGGACGAGCT
GGTGGACGAGACGGGAGTAGAGCCGAAAGACATCGAGCTCATCATGAGCC
AGGCGACGTGCTCTCGATCAGCGGCGGTGCAAGCGCTGAAGAAGAACGAC
ATGGACATCGTAAATGCCATCATGGAGCTCACCATGGACTGAGCGACGTG
CTCTCGATCAGCGGCGGTGCAAGCGCTGAAGAAGAACGACATGGACATCG
TAAATGCCATCATGGAGCTCACCATGGACTGA
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