mRNA_H-paniculata_contig7030.14982.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig7030.14982.1
Unique NamemRNA_H-paniculata_contig7030.14982.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig7030.14982.1 vs. uniprot
Match: D8LDX8_ECTSI (Kinesin motor domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDX8_ECTSI)

HSP 1 Score: 469 bits (1206), Expect = 1.810e-152
Identity = 353/429 (82.28%), Postives = 374/429 (87.18%), Query Frame = 1
Query:    1 DFQSGVVCCGLEEVQVLTAKDIFTILGKGIQQRKTAETLMNKNSSRSHSIFTLKIMIKECMPDGQEAMRHGQLNLVDLAGSECVGRSGAKNARAREAGNINQSLLTLGRVITALVEHHPHVPYRDSKLTRLLQESLGGRAKTCIIATVTSSSDALEETLSSLDYAMKAKNIENKPVANQKLSKVHLLREYAGEVESLRSMLQASRDKNGVYMEPWRFEQMENTLASQTNQLVEFEAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRAVVTEQTATEANLRSEAGQTKRSLELAETDVEGLRAKVARQEDDAASKRAGAEEFGKNASAAAGKVSAAVARFTGVHEDGCDGLRKKLNAAEGAARCAARELS 1287
            D + GVVCCGLEEVQVLTAKDIF ILGKGIQQRKTA TLMNKNSSRSHSIFTLKIMIKECMPDGQE MR+GQLNLVDLAGSECVGRSGAKN RAREAGNINQSLLTLGRVITALVEHHPHVPYRDSKLTRLLQESLGGRAKTCIIATVTSSSDALEETLSSLDYA+KAK+I+NKPVANQKLSK HLL+EYAGEVESLRSMLQASRDKNGVY+EPWRF+QMENTLASQ NQ+ E    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  X X XXXXXXXXXXXXXXXXXXXXXX   XXXXXXXXXXTR VV EQ +TE  L SEA QT  SL  AE DVEGL  KVARQE++AA KR+ A  FG+ A+AA   VS AV+RF+G H  GC  L+  L+ AE AA+ A+  LS
Sbjct:  166 DSKRGVVCCGLEEVQVLTAKDIFNILGKGIQQRKTAATLMNKNSSRSHSIFTLKIMIKECMPDGQEVMRNGQLNLVDLAGSECVGRSGAKNVRAREAGNINQSLLTLGRVITALVEHHPHVPYRDSKLTRLLQESLGGRAKTCIIATVTSSSDALEETLSSLDYALKAKSIQNKPVANQKLSKTHLLKEYAGEVESLRSMLQASRDKNGVYIEPWRFDQMENTLASQGNQIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLXRXXXXXXXXXXXXXXXXXXXXXXEKEXXXXXXXXXXTRGVVAEQASTEGALLSEAAQTAESLGAAERDVEGLLDKVARQEEEAAGKRSNAASFGETATAATKGVSEAVSRFSGEHAKGCGNLKGFLSRAEEAAKAASWGLS 594          
BLAST of mRNA_H-paniculata_contig7030.14982.1 vs. uniprot
Match: A0A836CEW9_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEW9_9STRA)

HSP 1 Score: 362 bits (929), Expect = 1.120e-111
Identity = 184/233 (78.97%), Postives = 209/233 (89.70%), Query Frame = 1
Query:   13 GVVCCGLEEVQVLTAKDIFTILGKGIQQRKTAETLMNKNSSRSHSIFTLKIMIKECMPDGQEAMRHGQLNLVDLAGSECVGRSGAKNARAREAGNINQSLLTLGRVITALVEHHPHVPYRDSKLTRLLQESLGGRAKTCIIATVTSSSDALEETLSSLDYAMKAKNIENKPVANQKLSKVHLLREYAGEVESLRSMLQASRDKNGVYMEPWRFEQMENTLASQTNQLVEFEAI 711
            GV  CGLEEVQVL A DIF IL +GIQQR+TA TLMNKNSSRSHSIFTLKIMIKE +PDGQE MR+GQLNLVDLAGSECVGRSGA   RAREAGNINQSLLTLGRVITALVEHHPH+PYRDSKLTRLLQESLGGRA+TC+IAT+TSSSDA+EETLSSLDYA+KAK+IEN+P ANQKL+K H+L+EYA E+ESLRSMLQA+R+KNGVY++P  +EQ+E+   SQ N +VE E +
Sbjct:  134 GVTVCGLEEVQVLDAPDIFRILERGIQQRRTAATLMNKNSSRSHSIFTLKIMIKELLPDGQEVMRNGQLNLVDLAGSECVGRSGATQNRAREAGNINQSLLTLGRVITALVEHHPHIPYRDSKLTRLLQESLGGRARTCLIATITSSSDAMEETLSSLDYALKAKSIENRPTANQKLTKKHMLKEYASEIESLRSMLQAAREKNGVYLDPAYYEQIESARESQKNLIVEQEGV 366          
BLAST of mRNA_H-paniculata_contig7030.14982.1 vs. uniprot
Match: A0A812SSK3_SYMMI (Kinesin-like protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SSK3_SYMMI)

HSP 1 Score: 311 bits (797), Expect = 9.350e-99
Identity = 161/236 (68.22%), Postives = 195/236 (82.63%), Query Frame = 1
Query:    1 DFQSGVVCCGLEEVQVLTAKDIFTILGKGIQQRKTAETLMNKNSSRSHSIFTLKIMIKECMPDGQEAMRHGQLNLVDLAGSECVGRSGAKNARAREAGNINQSLLTLGRVITALVEHHPHVPYRDSKLTRLLQESLGGRAKTCIIATVTSSSDALEETLSSLDYAMKAKNIENKPVANQKLSKVHLLREYAGEVESLRSMLQASRDKNGVYMEPWRFEQMENTLASQTNQLVEFEA 708
            D + GVVC  LEE+ VL    +F IL KGI+QR+TA TL NKNSSRSHSIFTLKIMIKE   +G+E +RHGQLNLVDLAGSECVGRSGA NARAREAG+INQSLLTLGRVITALV+HH H+PYRDSKLTR+LQESLGGRAKTCIIAT++ S  A+EE+LS+LDYA +AK+I+N P  NQ+++K  +L+EY  E+ESL+ MLQ +R+KNGVY++P  FEQME  L+SQ   + E E+
Sbjct:  106 DAKKGVVCQNLEEITVLDVHHLFEILQKGIKQRQTAATLCNKNSSRSHSIFTLKIMIKETNVEGEEVVRHGQLNLVDLAGSECVGRSGATNARAREAGSINQSLLTLGRVITALVDHHGHIPYRDSKLTRILQESLGGRAKTCIIATLSPSVAAVEESLSTLDYAHRAKSIKNAPQVNQRMTKKVVLKEYCAEIESLKQMLQITREKNGVYVDPLVFEQMEARLSSQEGLIAECES 341          
BLAST of mRNA_H-paniculata_contig7030.14982.1 vs. uniprot
Match: F0W4U7_9STRA (Kinesinlike protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W4U7_9STRA)

HSP 1 Score: 286 bits (732), Expect = 2.630e-83
Identity = 143/233 (61.37%), Postives = 189/233 (81.12%), Query Frame = 1
Query:    7 QSGVVCCGLEEVQVLTAKDIFTILGKGIQQRKTAETLMNKNSSRSHSIFTLKIMIKECMPDGQEAMRHGQLNLVDLAGSECVGRSGAKNARAREAGNINQSLLTLGRVITALVEHHPHVPYRDSKLTRLLQESLGGRAKTCIIATVTSSSDALEETLSSLDYAMKAKNIENKPVANQKLSKVHLLREYAGEVESLRSMLQASRDKNGVYMEPWRFEQMENTLASQTNQLVEFE 705
            + G+ C  L EV   TA  +F +L  G++ R T+ETLMN+NSSRSHSIFT++I  KE  P G++ ++ GQLNLVDLAGSECVGRSGA+NARAREAGNINQSLLTLGRVITALV++HPH+PYRDSKLTRLLQESLGGRAKT IIAT++   ++++ETLS+L+YA +A++I NKP  NQK++K  LL+EY  E+ESLR+ L+A+R K+G+Y+ P ++++M+  LA Q  Q++E E
Sbjct:  221 RGGIYCQNLLEVTTTTASHVFQLLEAGVKNRVTSETLMNENSSRSHSIFTIRIHSKEHNPAGEDLLKIGQLNLVDLAGSECVGRSGARNARAREAGNINQSLLTLGRVITALVDNHPHIPYRDSKLTRLLQESLGGRAKTTIIATLSPGIESMDETLSTLEYAHRARSIRNKPEVNQKMTKHALLKEYGSEIESLRNALEAARQKDGIYLPPAQYDEMQQRLAGQAAQVLELE 453          
BLAST of mRNA_H-paniculata_contig7030.14982.1 vs. uniprot
Match: A0A024GEV0_9STRA (Kinesin motor domain-containing protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GEV0_9STRA)

HSP 1 Score: 285 bits (730), Expect = 2.890e-83
Identity = 143/233 (61.37%), Postives = 189/233 (81.12%), Query Frame = 1
Query:    7 QSGVVCCGLEEVQVLTAKDIFTILGKGIQQRKTAETLMNKNSSRSHSIFTLKIMIKECMPDGQEAMRHGQLNLVDLAGSECVGRSGAKNARAREAGNINQSLLTLGRVITALVEHHPHVPYRDSKLTRLLQESLGGRAKTCIIATVTSSSDALEETLSSLDYAMKAKNIENKPVANQKLSKVHLLREYAGEVESLRSMLQASRDKNGVYMEPWRFEQMENTLASQTNQLVEFE 705
            + G+ C  L EV   TA  +F +L  G++ R T+ETLMN+NSSRSHSIFT++I  KE  P G++ ++ GQLNLVDLAGSECVGRSGA+NARAREAGNINQSLLTLGRVITALV++HPH+PYRDSKLTRLLQESLGGRAKT IIAT++   ++++ETLS+L+YA +A++I NKP  NQK++K  LL+EY  E+ESLR+ L+A+R K+G+Y+ P ++++M+  LA Q  Q++E E
Sbjct:  168 RGGIYCQNLLEVTTTTASHVFQLLEAGVKNRITSETLMNENSSRSHSIFTVRIHSKEHNPAGEDLLKIGQLNLVDLAGSECVGRSGARNARAREAGNINQSLLTLGRVITALVDNHPHIPYRDSKLTRLLQESLGGRAKTTIIATLSPGVESMDETLSTLEYAHRARSIRNKPEVNQKMTKHALLKEYGSEIESLRNALEAARQKDGIYLPPAQYDEMQQRLAGQAAQVLELE 400          
BLAST of mRNA_H-paniculata_contig7030.14982.1 vs. uniprot
Match: A0A8K1FAV9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FAV9_PYTOL)

HSP 1 Score: 285 bits (729), Expect = 2.890e-83
Identity = 147/234 (62.82%), Postives = 188/234 (80.34%), Query Frame = 1
Query:    7 QSGVVCCGLEEVQVLTAKDIFTILGKGIQQRKTAETLMNKNSSRSHSIFTLKIMIKECMP-DGQEAMRHGQLNLVDLAGSECVGRSGAKNARAREAGNINQSLLTLGRVITALVEHHPHVPYRDSKLTRLLQESLGGRAKTCIIATVTSSSDALEETLSSLDYAMKAKNIENKPVANQKLSKVHLLREYAGEVESLRSMLQASRDKNGVYMEPWRFEQMENTLASQTNQLVEFE 705
            + G+ C  L EV   TA  +F +L  G++ R T+ETLMN+NSSRSHSIFT++I  KE  P  G + ++ GQLNLVDLAGSEC+GRSGA+NARAREAGNINQSLLTLGRVITALV++HPHVPYRDSKLTRLLQESLGGRAKT IIAT++  +D+++ET+S+L+YA +AK+I+NKP  NQKL+K  LL+EY  E+E+LRS LQA+R K+G+Y+ P +F +M+  LA Q  Q+ E E
Sbjct:  160 RGGIYCQNLLEVTTTTASHVFELLETGVKNRITSETLMNENSSRSHSIFTIRIHSKENNPVGGDDLLKIGQLNLVDLAGSECIGRSGARNARAREAGNINQSLLTLGRVITALVDNHPHVPYRDSKLTRLLQESLGGRAKTTIIATLSPCADSVDETMSTLEYAFRAKSIKNKPEMNQKLTKNVLLKEYGSEIEALRSALQAARAKDGIYLPPSQFNEMQERLAGQAAQITELE 393          
BLAST of mRNA_H-paniculata_contig7030.14982.1 vs. uniprot
Match: A0A6A4ZIG7_9STRA (Kinesin-like protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4ZIG7_9STRA)

HSP 1 Score: 272 bits (696), Expect = 4.470e-83
Identity = 141/229 (61.57%), Postives = 180/229 (78.60%), Query Frame = 1
Query:    7 QSGVVCCGLEEVQVLTAKDIFTILGKGIQQRKTAETLMNKNSSRSHSIFTLKIMIKECMPDGQEAMRHGQLNLVDLAGSECVGRSGAKNARAREAGNINQSLLTLGRVITALVEHHPHVPYRDSKLTRLLQESLGGRAKTCIIATVTSSSDALEETLSSLDYAMKAKNIENKPVANQKLSKVHLLREYAGEVESLRSMLQASRDKNGVYMEPWRFEQMENTLASQTNQL 693
            + GV C  LEEV  LTA  +F +L  G + R +AETL+N+ SSRSHSIFT++I  KE    G++ +R G LNLVDLAGSEC+GRSGA+N RAREAGNINQSLLTLGRVITALV+ HPHVPYRDSKLTRLLQESLGG+A T IIATV    D  +ETLS+LDYA +AKNI+NKP ANQ+++K  L++EY+ E+++LRS L A+R+K+G+Y+ P +F +M++ +A    QL
Sbjct:  160 RGGVYCQNLEEVTTLTASHVFELLETGAKNRISAETLLNEQSSRSHSIFTVRIHSKEVNIGGEDIIRSGTLNLVDLAGSECIGRSGARNVRAREAGNINQSLLTLGRVITALVDKHPHVPYRDSKLTRLLQESLGGKAMTTIIATVGPGGDCTDETLSTLDYAHRAKNIKNKPEANQRMTKHVLIKEYSQEIDALRSQLIATRNKDGIYLPPAQFAEMQDRIAGLGTQL 388          
BLAST of mRNA_H-paniculata_contig7030.14982.1 vs. uniprot
Match: A0A4D9DG63_9STRA (Kinesin motor domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DG63_9STRA)

HSP 1 Score: 281 bits (719), Expect = 1.880e-81
Identity = 144/235 (61.28%), Postives = 182/235 (77.45%), Query Frame = 1
Query:    1 DFQSGVVCCGLEEVQVLTAKDIFTILGKGIQQRKTAETLMNKNSSRSHSIFTLKIMIKECMPDGQEAMRHGQLNLVDLAGSECVGRSGAKNARAREAGNINQSLLTLGRVITALVEHHPHVPYRDSKLTRLLQESLGGRAKTCIIATVTSSSDALEETLSSLDYAMKAKNIENKPVANQKLSKVHLLREYAGEVESLRSMLQASRDKNGVYMEPWRFEQMENTLASQTNQLVEFE 705
            D + GV   GLE+V    A     +L +G+  R+TA TL NKNSSRSHS+FTLK++IKE    G+E +R GQLNLVDLAGSEC+GRSGAKN RAREAGNINQSLLTLGR ITAL E HPH+PYRDSKLTRLLQESLGGRAKTCIIAT++  +  ++ETLS+L+YA+KAK+I+NKP  N + S   L++EY  E+ESL+SML A+R+KNGVY+ P  ++Q++  L +Q  ++ E E
Sbjct:  194 DVRKGVQVLGLEDVNCRDAASTVALLQRGVTNRQTAATLCNKNSSRSHSVFTLKVVIKETNGSGEEEVRAGQLNLVDLAGSECIGRSGAKNERAREAGNINQSLLTLGRCITALTEGHPHIPYRDSKLTRLLQESLGGRAKTCIIATLSPVASNVDETLSTLEYALKAKSIKNKPELNARSSSRTLIKEYNSEIESLKSMLMATREKNGVYLAPAEYDQLQAQLQAQAERIKESE 428          
BLAST of mRNA_H-paniculata_contig7030.14982.1 vs. uniprot
Match: A0A397DYY3_9STRA (Kinesin-like protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DYY3_9STRA)

HSP 1 Score: 267 bits (682), Expect = 9.440e-81
Identity = 138/229 (60.26%), Postives = 177/229 (77.29%), Query Frame = 1
Query:    7 QSGVVCCGLEEVQVLTAKDIFTILGKGIQQRKTAETLMNKNSSRSHSIFTLKIMIKECMPDGQEAMRHGQLNLVDLAGSECVGRSGAKNARAREAGNINQSLLTLGRVITALVEHHPHVPYRDSKLTRLLQESLGGRAKTCIIATVTSSSDALEETLSSLDYAMKAKNIENKPVANQKLSKVHLLREYAGEVESLRSMLQASRDKNGVYMEPWRFEQMENTLASQTNQL 693
            + GV C  LEEV  LTA  ++ +L  G + R TAETL+N  SSRSH IFT++I  KE    G++ +R G LNLVDLAGSEC+GRSGA+NARAREAGNINQSLLTLGRVITALV+ HPHVPYRDSKLTRLLQESLGG+A T IIATV    D ++ETLS+LDYA +AK+I+NKP ANQ+++K  L++EY+ E+++LRS L A+R+K+G+Y+   +F +M+  +     QL
Sbjct:  159 RGGVYCQNLEEVTTLTASHVYELLETGAKNRMTAETLLNDQSSRSHCIFTIRIHSKEANVAGEDILRSGTLNLVDLAGSECIGRSGARNARAREAGNINQSLLTLGRVITALVDKHPHVPYRDSKLTRLLQESLGGKAMTTIIATVGPGCDCVDETLSTLDYAHRAKSIKNKPEANQRMTKHVLIKEYSQEIDALRSQLIAARNKDGIYLPTSQFAEMQERITGLGTQL 387          
BLAST of mRNA_H-paniculata_contig7030.14982.1 vs. uniprot
Match: A0A662X225_9STRA (Kinesin motor domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X225_9STRA)

HSP 1 Score: 279 bits (713), Expect = 1.280e-80
Identity = 146/233 (62.66%), Postives = 185/233 (79.40%), Query Frame = 1
Query:    7 QSGVVCCGLEEVQVLTAKDIFTILGKGIQQRKTAETLMNKNSSRSHSIFTLKIMIKECMPDGQEAMRHGQLNLVDLAGSECVGRSGAKNARAREAGNINQSLLTLGRVITALVEHHPHVPYRDSKLTRLLQESLGGRAKTCIIATVTSSSDALEETLSSLDYAMKAKNIENKPVANQKLSKVHLLREYAGEVESLRSMLQASRDKNGVYMEPWRFEQMENTLASQTNQLVEFE 705
            + GV C  L EV   TAK ++ ++  G++ R T+ETLMN+NSSRSHSIFT++I  KE  P G++ +R GQLNLVDLAGSECVGRSGA+NARAREAG INQSLLTLGRVITALV++ PHVPYRDSKLTRLLQESLGGRAKT IIAT+   +D+++ETLS+L+YA +AKNI+NKP  NQK++K  LL ++  E+ESLR+ L+A+R K+GVY+   +F +M+  LA Q  QL E E
Sbjct:  178 RGGVYCQNLLEVTATTAKHVYGLVNTGVKNRITSETLMNENSSRSHSIFTIRIHSKEHSPAGEDLLRVGQLNLVDLAGSECVGRSGARNARAREAGTINQSLLTLGRVITALVDNLPHVPYRDSKLTRLLQESLGGRAKTTIIATLAPCADSVDETLSTLEYAFRAKNIKNKPELNQKMTKAGLLNDFGSEIESLRAALRAARLKDGVYLPLEQFTEMQERLAGQGVQLTELE 410          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7030.14982.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDX8_ECTSI1.810e-15282.28Kinesin motor domain-containing protein (Fragment)... [more]
A0A836CEW9_9STRA1.120e-11178.97P-loop containing nucleoside triphosphate hydrolas... [more]
A0A812SSK3_SYMMI9.350e-9968.22Kinesin-like protein (Fragment) n=1 Tax=Symbiodini... [more]
F0W4U7_9STRA2.630e-8361.37Kinesinlike protein putative n=1 Tax=Albugo laibac... [more]
A0A024GEV0_9STRA2.890e-8361.37Kinesin motor domain-containing protein n=2 Tax=Al... [more]
A0A8K1FAV9_PYTOL2.890e-8362.82Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6A4ZIG7_9STRA4.470e-8361.57Kinesin-like protein (Fragment) n=1 Tax=Aphanomyce... [more]
A0A4D9DG63_9STRA1.880e-8161.28Kinesin motor domain-containing protein n=2 Tax=Mo... [more]
A0A397DYY3_9STRA9.440e-8160.26Kinesin-like protein (Fragment) n=2 Tax=Aphanomyce... [more]
A0A662X225_9STRA1.280e-8062.66Kinesin motor domain-containing protein n=2 Tax=No... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7030contigH-paniculata_contig7030:587..11168 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score474.6
Seed ortholog evalue5e-131
Seed eggNOG ortholog2880.D8LDX8
KEGG koko:K10398,ko:K14400
KEGG Pathwayko03015,map03015
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0000278,GO:0000281,GO:0000902,GO:0000910,GO:0000911,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005819,GO:0005856,GO:0005871,GO:0005874,GO:0005875,GO:0005886,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007049,GO:0007051,GO:0007052,GO:0008150,GO:0008574,GO:0009653,GO:0009826,GO:0009987,GO:0015630,GO:0016020,GO:0016043,GO:0016049,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022402,GO:0030865,GO:0031122,GO:0032502,GO:0032506,GO:0032989,GO:0032991,GO:0040007,GO:0042623,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043622,GO:0044422,GO:0044424,GO:0044430,GO:0044446,GO:0044464,GO:0048589,GO:0048856,GO:0048869,GO:0051301,GO:0060560,GO:0061640,GO:0071840,GO:0071944,GO:0097435,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:1902410,GO:1902850,GO:1903047,GO:1990939
EggNOG free text desc.ATP-dependent microtubule motor activity, plus-end-directed
EggNOG OGsCOG5059@1,KOG0243@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko03021,ko03036,ko04812
Exons9
Model size1288
Cds size1287
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930847.9909837-CDS-H-paniculata_contig7030:587..7731622930847.9909837-CDS-H-paniculata_contig7030:587..773Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7030 588..773 -
1691481479.6092176-CDS-H-paniculata_contig7030:587..7731691481479.6092176-CDS-H-paniculata_contig7030:587..773Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7030 588..773 -
1622930848.0073574-CDS-H-paniculata_contig7030:2697..28501622930848.0073574-CDS-H-paniculata_contig7030:2697..2850Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7030 2698..2850 -
1691481479.620129-CDS-H-paniculata_contig7030:2697..28501691481479.620129-CDS-H-paniculata_contig7030:2697..2850Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7030 2698..2850 -
1622930848.0229359-CDS-H-paniculata_contig7030:5457..55411622930848.0229359-CDS-H-paniculata_contig7030:5457..5541Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7030 5458..5541 -
1691481479.6357634-CDS-H-paniculata_contig7030:5457..55411691481479.6357634-CDS-H-paniculata_contig7030:5457..5541Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7030 5458..5541 -
1622930848.0427048-CDS-H-paniculata_contig7030:6672..67891622930848.0427048-CDS-H-paniculata_contig7030:6672..6789Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7030 6673..6789 -
1691481479.6496234-CDS-H-paniculata_contig7030:6672..67891691481479.6496234-CDS-H-paniculata_contig7030:6672..6789Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7030 6673..6789 -
1622930848.0569878-CDS-H-paniculata_contig7030:7305..73621622930848.0569878-CDS-H-paniculata_contig7030:7305..7362Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7030 7306..7362 -
1691481479.6693695-CDS-H-paniculata_contig7030:7305..73621691481479.6693695-CDS-H-paniculata_contig7030:7305..7362Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7030 7306..7362 -
1622930848.0751688-CDS-H-paniculata_contig7030:9179..92901622930848.0751688-CDS-H-paniculata_contig7030:9179..9290Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7030 9180..9290 -
1691481479.6812236-CDS-H-paniculata_contig7030:9179..92901691481479.6812236-CDS-H-paniculata_contig7030:9179..9290Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7030 9180..9290 -
1622930848.0924268-CDS-H-paniculata_contig7030:9521..96441622930848.0924268-CDS-H-paniculata_contig7030:9521..9644Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7030 9522..9644 -
1691481479.6913412-CDS-H-paniculata_contig7030:9521..96441691481479.6913412-CDS-H-paniculata_contig7030:9521..9644Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7030 9522..9644 -
1622930848.1065702-CDS-H-paniculata_contig7030:10429..106461622930848.1065702-CDS-H-paniculata_contig7030:10429..10646Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7030 10430..10646 -
1691481479.7027633-CDS-H-paniculata_contig7030:10429..106461691481479.7027633-CDS-H-paniculata_contig7030:10429..10646Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7030 10430..10646 -
1622930848.1180062-CDS-H-paniculata_contig7030:10929..111681622930848.1180062-CDS-H-paniculata_contig7030:10929..11168Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7030 10930..11168 -
1691481479.7136667-CDS-H-paniculata_contig7030:10929..111681691481479.7136667-CDS-H-paniculata_contig7030:10929..11168Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7030 10930..11168 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7030.14982.1prot_H-paniculata_contig7030.14982.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig7030 588..11168 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig7030.14982.1

>prot_H-paniculata_contig7030.14982.1 ID=prot_H-paniculata_contig7030.14982.1|Name=mRNA_H-paniculata_contig7030.14982.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=429bp
DFQSGVVCCGLEEVQVLTAKDIFTILGKGIQQRKTAETLMNKNSSRSHSI
FTLKIMIKECMPDGQEAMRHGQLNLVDLAGSECVGRSGAKNARAREAGNI
NQSLLTLGRVITALVEHHPHVPYRDSKLTRLLQESLGGRAKTCIIATVTS
SSDALEETLSSLDYAMKAKNIENKPVANQKLSKVHLLREYAGEVESLRSM
LQASRDKNGVYMEPWRFEQMENTLASQTNQLVEFEAILSARSNETKELKA
DRDAFQDQVTELEGELEESHQKEENTRAQLAETGRRLQRVEDELAASRAE
VEQLKKDLAASQHKLQVTEGELAATRAVVTEQTATEANLRSEAGQTKRSL
ELAETDVEGLRAKVARQEDDAASKRAGAEEFGKNASAAAGKVSAAVARFT
GVHEDGCDGLRKKLNAAEGAARCAARELS
back to top

mRNA from alignment at H-paniculata_contig7030:587..11168-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig7030.14982.1 ID=mRNA_H-paniculata_contig7030.14982.1|Name=mRNA_H-paniculata_contig7030.14982.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10582bp|location=Sequence derived from alignment at H-paniculata_contig7030:587..11168- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GATTTCCAATCAGGGGTGGTTTGCTGCGGACTAGAGGAGGTCCAAGTTCT CACCGCAAAGGACATCTTCACCATCCTCGGAAAGGGTATCCAACAGCGCA AAACAGCCGAGACATTGATGAACAAGAATTCTTCCCGAAGTCATTCCATC TTTACCCTAAAGATTATGATCAAGGAGTGCATGCCGGATGGGCAGGAGGC AATGCGGCACGGCCAACTTAACCTTGTCGATCTCGCCGGGTAAGAGTGGG GGAAAGACTTGTAGAAGTACGGACGGTAGGAAGTTTCTTGTTATTGTGGG CGTTCGATTTTTCGATTGCCTTCGTCTCTTTTGTTTTTTGTTTTTTTTAG TTAAAAAATAACAGCATATTGGTGAAATGGGGACTCAACTTTGAGATGAG GACCCTGGGTTATATTCGAAATAGGCTATATCCTGAAGATCCGAAATTGA TTTTCAGGATAAGGCCAATTTCCAATGTATCGTCAACAACAACAACAACA ACAATAACAACAAACGAAATAGGTCGGAGTGCGTCGGGCGGTCAGGCGCG AAGAATGCGCGAGCGCGGGAGGCGGGCAACATCAACCAGAGCTTGCTCAC GCTTGGAAGGGTCATCACCGCCCTGGTCGAGCACCACCCCCACGTGCCCT ATCGCGACTCCAAGCTGACGCGCCTCCTGCAGGAGAGCCTGGGAGGCAGA GCCAAGACGTGCATCATTGCAACAGTTACTTCTTCCTCGGTGAGTCTTTT TAGGAGGAAAGAAGCGGAGGGGGGAGGGGGGGGGGGGATATATTCCACTG TACCCATGTTGAGGCTATGTAGTGAATTAGATCGGTGTGAGGCTACTGTG ATTTAGAAAAAAAAAAAAAAGTGTTAATGGACGGGAAAATGAGCCAAATT TATCAAAAGATTAATCGTGACATGTAGAATATGGCAATGACCGTGGACAA AATGGAGGTACCGTATGTTCAGCATGTTGAAGTTCCTGGATTACGCTTGT TCGAAGTAAAAAAAAGTAGAATGGGAGAGGGGAGGCGGGGAGGCGGGGGG TATAGGTGTCTTACTCGCGTGTGTACCGTACATGGGCGTATAGCATGACT CACTTATCAATGAACAGCGAATGCAAAAATCTGCACATACCATGGCATGG CGAAAAACGTCTAAACACAACGTATACACATGCTTGACGCAAGCATCTAT ACTAACCGTGGACGTTCATGTCTCGCAGTCTCACACTCGGGGACCTCCCT CGTCCACTGACCCGAGTATTGTTTTACTCTGTACGTAAGGGTTATTGCTC ATCCACCATGCACGGAAGTGACCACAGCTCACTTCTCGGACCAATTATCA GAACATGACACATCCAATGCGTAGCACAGATCGTGTCGCCTCTAAGTTTA CTAGATAACACGTCATACGCCAAATCTGTCATGAAACGCATATTTGATGT ACTGCTACAGTACCTGTGCTACACACCGCAGGAAAAGTGAGCTTGTGCTA TTGATTTCCGGGCGTGATTTGTAGGATGCGCTCGAGGAAACCCTAAGCTC CTTGGACTACGCGATGAAGGCGAAAAATATCGAGAATAAACCGGTTGCGA ACCAGAAGCTCAGCAAGGTCCACCTGCTCAGGGAATACGCCGGCGAGGTG AGTAGCGAACTAGTATGGTGTTGTTGCCATCATCCAATATTGGTGTTGTT GTCATCATCCAATATTGGTGTTGTTGTCATCATCCAATGTTGGTGTTTTT GTCATCTCTTGCGAGACTGTTTGAAGCATTTTCAACTTTTTCAAGTCGAA ATTAAAAAATGAATACCTGTGTCTGTGTGTTTGTGTGTTTTGTGTGCTCG TGTCTAATGTATATTTTTTGTTCATCAGGTGGAGAGCCTTCGGTCCATGC TGCAGGCATCACGGGACAAGAACGGCGTGTACATGGAGCCGTGGCGGTTC GAGCAGATGGAGAACACGTTAGCGTCACAGACCAACCAGGTTGGTCTTTT ATTTTTTGCCCTCCGCTGTGGCTATTCCTGTAATGTCACGCGATTCACAA TTTCACAGTGCGGTTTCTTCTGAGACCTCGATTTTTACAAACGCCATATT CCATACAGTTAGCGAACTAAACGTCGCAGAGCGCTTTTCGGAACACGCCC CAGCGGGGAGATTTTTTTGCGCTCAGGCCCGATCTTGAACACGCTGGTGC TGTTTATTAACATTCGACAGTGACACTGAAAGATGTTCGTGGCGTCATTT ATTTATTTTTTGTTGCAAAATTTCGTTTGAGTAGGGCGGGCTATGATAGG CCGGAGGCGAGGAGGGGGGCGTTCTGATAGCCCTCTTCAAGTATGGACAG TACAGTAAGCAGTTGGGCGCCCTAGAGGGATATCACCTGCAGACTTCGAT AATAGCGTAGGTGAATCGTCACCGAAGCGGGCGGTGTTACCGTCGATAGC CAGCCCCTCGTGGGAGGGGTGGGCATTGTGTTGTATTGTGTGTTGACTCT TCTTGGAGATCTGAATCTTCCATCACACCGTGGTCCTGACTTCCTGACTG TACCGCACTTCAGTTGGTTGGTGCATTTTTTTTTTTTTTTTTGTCATAAT TTTTTTTCTATTTAATTGATTTACCAATTGTGGCCACGGGTGGTTACGCT TGTATAGTCAATGCTTGTTGTCGACCCATAGACTCGATGCACTCGCATTG GGGGACTCACGTAGCGCAGCGCAGCGTTGCGTTCCGTTGCGCTCGCATAA AGATTCCACTGCTTAGATGAAGACTTCGTTTTTCAAGGGAAGAAATATCT TCACTTAACTTTGATGCCCTCGAAGGTGCAAGAACGTACAGAGGTGCATT CATTCTCTTAAAGCCGAACACTCCACGAAGGGGGGTCAAGGGCCTGCAGC TCTCGATTCGAACAGGTTTTGGAAAGCGCCACGTGTTGTTGTGCTGTCTT ACTCATGTCCCAAAGTTTCCAGACGACTTTCAGGGACCTTCGTCGACCTC CATCCGAAGTGTGTAAGATTAGCTCATGAGTTTTACAGATTTGACAAGCT GATGCCGAAACGGCTAAGGTGGTGATCGTTATCATCACCATCGACCTTCA ACAAAATCGTGTCAAGTAATGATGCCGTGAGTATTTATATATAAAAGACA TTCCCCTGGACGCTTCGAACCCCGAGAACGTTATACAGGACACGCGAGTA CAAAATAACACTGTATACAGTACGATGTGGTACGATACGATACGATACGA TACGATACGATACGATACGATACGATACGATACGATACATGGCAAGCTAC CTGCTAGTACTTGATCAGCAGCTACCTCTGTGTCAGCTGCAACACTGGCA CGAGCTTTGACTATTTCCCCTGTCACCGAGCATCATGGTACACTAGGTGC CTCGCACCTCGGGGCGGGCGATCTAGGGGTAGGGTTGCGCTGTGGCGAGT TGTTGTTAGGCATGTGCGTGTGCTTGTCTTTGTGTTTTCACTTGGTGGGA AGTGCACCACTTCTTATCGTATTTATTGCTGTGTGTGTGTGTGTGTGTGT GTTTTGTCATTGCGGTCCGAAACTAAACGTTTAACGTTCGACAACAAGTG TGGCGATACGGTATCTTTTGACTGTTTTTGTTTATATTGAGTTTTTTTGG GTTTTTTTCAAGATATATATCTATATATTGGATAAGAATTCGCGCTTTCC CCTTCCCTTAAACCACCTCTCAACGTGTGTGCTTTTGTGCTTTCTTGTTC GTATCTGATGCCTTTTTTCTTTTTCTTTTTCTTTTTCGCGTGTCCAAAAA TCGAAGCTGGTGGAGTTTGAGGCGATTTTGTCTGCCCGGAGCAACGAGAC GAAGGAGCTAAAGGTCCGTAAGCAATTACATGTATATATATATATACATG TCATTTCCCATCATCAGTTTTATTCATTTTTGCTTCAATTTGTTTCGGAG GGAATAAAATATGATGGGTATTTTGTGTAATGATGTTTGATCACTCTGCA TGGCTTTACCTACAAAAGATGCGCTGTCGAAACGTAAGGTGGCGTTCTTT ATCTCTCCGTCCCTCTCTCTACTATATATACAGCTCCAGAGGCAAATCCA GGAAACTTGACCACTTAGATTGCAACGACAAACAATTACAAGGATGGCTG TATGGCTGCAAAAAGAAGCTGCTGCAACAAGCTACCCAAAAAAACATCAT TTTTCTGAATCGAAGTCAACGAAGTGATTGATTGGACGGTACCGCGGGTC AGAGAATTTCTTGTATTATGCCACACTCTCCTCCCTCCATATGTTTAATG TGGTGCTCTGCCCATTTTTATTTTTTTTCTTGTCTTTTTTCCGTGGAAAA TGACAAAAAAAAAATCTACTAAACCATAGGCGGACAGAGATGCTTTCCAA GACCAGGTCACCGAGTTGGAAGGAGAGCTGGAAGAGTCCCATCAGAAAGA AGAGAACACAAGGGCTCAGTTAGCGGAGACCGGGCGGCGCCTTCAGGTCC GGAGATCGATATGACAGCAGCAGTTGTTCCATTGTTATTGTCATCACTTA GAAGTGCTACTCTATAGTAATCGATATGTTAGGCACGGAGTAACATCGCT TGTCGGTAAAATCGAGTAGCTCGGTGGACGTATTGCGGTCTAGCCACTCG GTAATTTGCGGTGAGGTCTATCTATATCTTGTTGCTTGCTTTTATTGGAC ATGGGATGCTGCCCCGAGTCATCCTACAGTAGGGAGGGGGGGGGGGGAAT TGTTTCACGAAGGCTGTTTTGCAAAAGCGGCGCAAAAATAACGCGAATCA AAACCATTTCAATTGCATGTGTTTGTGCATCCCTAAAGAGTGCACATTCC ACGAGTTTAAGGTTGATTTCTGTTTAAGGGCGGGCAATAACTGCAAAATA TATATGTTTTTAAAAAATGCCGGATCCCCTTCTCGAAGCGACTCCTTCGT TAAACAAAGTGACTCGAATATCCCCCCCCCCCTATAGTAGGTTGACTGCC CCACAGCTGAGAAAGGTTAATGACGTGCAGTAGTGTTTTACCATGTCGAG CGCGATGGTTGGGATACAGTTTTTAACTCGGCATAATGATATATCCAGAA ATTTATCAAAAACCGTTCTGGTCTCGGTCGTTCTGAGTTTTGAGTTGTGC CACCCTATTTTGTTTTTGCTCCCGGGTACCAAAAAATTTAAACCATGATA TATAAAAAAAAACAAAAACTGTTGACCATCGTATTCGATCGAGCAAGCAT GTGTGCACATGCATGCGTGCGTGCGTGCTTGTGTGTGTATGTTTATGAAG GCTTTCGCTGGTAGTGAGGATATCGTCTATATATATTTTTCGCGCGCTGC TCGTTGAGTTCTATTTTTTTTTTTCTTGTTTCCATTTTTTCAATTTATTC AATAATGTCGTGCTTCTGAACTTCCCGGTACCCCTGAGCCCCAGTCTCCA GCTGCGCTACATCCCGGAGATGTTTTTTCCCCCATAGTGCAAGCCATATT TTTTCTTGTAGCTGTGTCCGCCCATTCAATGAGGATCATTCCTATCTTGT GCGAGATCTCTATTTCCCTACTTTTTTTTTCTTTTTTTTTAACTCTTCGT GTTTTTTGCTGATACGTGATTGTATAGAGGGTCGAGGACGAACTAGCGGC TTCGAGGGCCGAGGTGGAGCAGCTGAAAAAGGACCTAGCGGCTAGTCAGC ACAAATTACAGGTGCTTGGGGAGAAACTGTTGTATTTAATAGTACCAATG GTTAGATTCTTCATTTTTTTTTTTTTTTGTAAGAATATCGCTGCGATTCG TTCTTTCTTTTTGTTTTAGGAAAATTTGGGAGTTTGGGCCGGATTTTGAA TCAAACCGACCTGTTTGTTGGATACTGCAAGTATAGAATTGGAGCAGGAG TAGCCCTTTTCTCTCCCTGGATAATCAGCATGCTATTAATATATTTATAT TCCAACTGTTGAATTAAACCAAAATCATAAACATAGTTTAAAATTGTTGA TATCATTATTGCTATCATAAGCGTTTTTTATGAAACCAACATAGTTTACG AAATCTTTCATGTAGTCCCGCTGTGGCAGCGCATTGCTTACTGGCTTAGT TCAAACCCCTTGAACATGCATATGTCCCAGGTCTGCTCACGTGTGGCTTT TAGACAGCCTCGCGACTCATCACTCCAGGGGTCCGCGGCGGCACAATTGC CAGTGAGCTACCGCGCTGCCACTGCATGACCCTCTGAAATATTTGGTAAA TTATGTTTGTTCCCCCTAATTCTCAATAAAAAATATTACGATCATAATAT TTTCTTTCAAACGCAAATAATCGTTGTTAAATGTATATAATACATTTTTT TTTTTTTTTGGGGGGGGTGGGTTGCATCTACGGCCAAGAGGCTCGTTCAG TTCCTGTGTGTTGATATTTTTCTCGTGGCGCGGAAACAAACAGTGGCTCG CTCGTAGTAGGCTCGCTGCCGGTCGGGCCACCGTGTTGTTGGCTTTGGTA GCTGCCAAGAGCTGGAACACGCTCGCAATAAGCCTGGGGCATTTTGCTCG TACTCGCTCTAAGATTGAATCAGAGAGGGTTAGGCTGGAATCAGCAAAAA TTGAAGGATAAAAAAAGCGTTCGCCCTGAGATTGGCAATCCTTGAGAAGC CTTGGAGCCTTACCTCGTAACGGTTACATGATGGATAGACTTGCTAACGA CCAGTTGTTAATAACGATGAAGGGGGGGGAAGGGGGTGCGCTTTGGGGGT TTTATGTCGACGTTAGTGCAGTGAGAACGACCGAATACATTAGTTTTTCG TACAAACGGCACGGCAATAAACACACCCGTGCGCAACTGATTGGGAGTTC AATCATAGGGTTCTCCAGGGTCAAGCGTCCTGTAGACATGTTGGTCGTTA TTCGTAACTGGTTCTTAGGAAATGTATATTTTGGGCGTTGCGGGGTTCGG CTCCTACGTATCCGCATGTATATTTAACCGCGGAAAAATGCGAATACTTG GCGTATTCGCCACGAAATTTAACAAGTAGTCGTGTGAGTTTCAGAATGAG CGGACACATGAAATAGAGTACCTACCCCTGTCCATTCGATTTACGTGTAT TATTAGAAGTCGTGGTGGTCTGGGGCACATAGGATACACAAGCTCATTCG GAAACTCAGGCGAATACTTTTTACATTTTCGCGGCGAATACGCCAACTAT TAGTACTTTACCGAGGAGTGATGTATTCATATATATATATATACATAAGC TGTAGGTACGAACGGTGTGCACATTCTGTAAAACCTGTTGGACAATAGTA GCTGGTTACGATAAGTCTCATTTGCAATTTTGTTCTTTATATCAGATGTT AATCGAAGGGTGCTAATGCTTTGATTTTATTTCAGTATACTCGCGTGTGT GTGCCTGGTGCCTATCGATCCGCAAAACAAACACGTCGACTGCGCCGGAG GTAAGTGTCGAACTTTACGCGGTCTCAAAGAGACTTACGGCGTCACCTCT TAGACGACATGATACTTTGAGGCTTACGTGCAATTTTGGTGCTATCAGAC GTGAACTAAATGTGTTTTTTTCGAGACGCAGCGCCCTGATATGTGAAACA GTTTTTTCCATATAATAGAAGGTAGAATATATTATACGTCCAGACGCACA ACCTATTGAAGATCTGCTGTTGGGTACTCCTGTGGAACGCTCCGAGAAAC CGCTGATTTTCAATACGAATCGGACGTAAATCTTGATGTTCGATAATGCT TGACACGTCAGACGGATCAGATCGTACTCGGATCATGCTTGCCATGATCG TTTTATCCGTACATGTGTCCCACAAGCGAGTCGTACGTCGTGGTACGATC TGTGCATGTTTATGCACTGGTGATCCGTGTTCCCACGGATCGGGAGTGGG TGTTTGCCACAAGCCATCCGTAAACCGTGTTTAATGCATACATGTTTGTG CACTGGTGATGCGTGTACCCCTACAGATCGTTTGCACAAGTGACGCGTAC ACGGTGTTTAATCCGTACATGCTTTGCCGCTAGTAATCCGTACCCTACGG ATCGTTTGCATATATTTGCCTGCCACTGATCCGTATCCCATGGATCGTGC GAATATTGATCAGTCCGACGTATGATTGCAATGCTTCGAAAGTTATCGCG TCCCCAAGGGGTTGATATGATGTGTATGTTTGTGTGCGTATGTACCTGTG TATACATACAGCTGATAAATAGCTGGCTCTATGTGTGTTAGTTATTGTAT GGGAGTACGTAGCTGGCCATCATGACTGTTTCCGGGGATTGCGAATTGAA AATAAATACGCCTGTCAGGTGACGGAGGGAGAGCTGGCGGCGACGAGGGC TGTGGTGACCGAGCAAACAGCGACAGAGGCCAACCTGAGGTCGGAGGCGG GGCAAACGAAGCGCTCCTTGGAGCTGGCTGAGACAGATGTAGAAGGACTC CGAGCCAAGGTTGCAAGACAGGTGTGTACCAACGTTGGTTGTGATACTTT TATGTATTCAAGCAACAAATTACACGCATACGGTAAGTGTCGATCGTTTT TTGTATTAAAAAAAATCGCTTAAATATCAGAATCGGTTCACACATACTTA ACCCTTAACCGTTACAGACCAGCAAGGCTGTGTTTCGACCTATTTCAACG TGTGGTTTTTACAGTCCCGCGACGAAAAAGGGAGTGGGGGGGGAGGGGAT TTCGACGGATATAATTGCTTTGACCGAGTTGGGATCAGACCCGTATGTCG ACAAACATAACAAACACATGGTACAGCAGAATCTCGATGTGTTTTGGTGA TCAAAACGAATTTAGAAGATCAGATATCCTGCTAATTTAGGTGTTTAAAG GCATCGGATGTTTTGACAATATTCACCTACGTCAAGGGCTGGCATAGCAG CTGGAGCGCCGTGTACTCGACGTAGAAGAGGTGGTCCAGCTGACAGGCTG TAGTACACACGTTGGGTCCCTTGAGCGGCGGCAGTCAGCTGCACAATGAT GCCGTAGACTTGGGGCCCGAAACAAAAGATTGCAGACAATCGGTGTACTG CTGCATGCAGCACCATATCTGTAGCATATAAGAGCTGGCAGGCACCAGTA TATTATCCCGAGGTTTCTGCAGCGAACGATAGCCACTGCGTATGTGGCGG GCGTCCTGTTGTAAGTGATGGCACTCACTGGTACAGCAGCAGGTGGTCTG CCATAGTCAGTCGTGGCTGTCTGGACATGTCAACATGACGAATATTTATC GTAGTGGGTATATAGGTGTTGGCCTTCCTGGTACGAAGTTATTCCTGTCA TTTTTTATTTTTTTTCCTCCAGGTATAAGGGAGTTAATAATAAAAAGTCA GATTTTTTTGTAAAACCTTCAATGGTTGGATTCTTGTATATTGAAAAATG CATGTAGGCGTCGCGGCCCGATCTGATCGGTGTTGTTATTGTGCTGTGTC ACCACATCCCTTGGACACGGGGAAGAAGAGGACGATGGTGACGATGCCAT GATGAAATTCGCCTCAGGCATTTATTTGATTATGAAGTGGGTACGAACGG TGTAAAGTGTGTTCAGCTCTGTCTCTTTTTTCTTTTTTTTTTCTCTAGGA AGGTCTGGGCCAAATACCAGTTTATCTCAAACGAGCGTATGTCGTTTGCC ACGTGGACTTTTTTTTTTTTTTTTTCAACCCCCTGAAGGCGAAGGCAAAA CCTTTATTCGATGCTTCCATACCTCAAGTATTTCTACCGAAGTATTTCTA CATCTGCTTTAACAGAACAGAGTTATTTATTCCTCTGCGGGGTAGGCGCC ACCCCGGTTCGGTCGAACCAAGGACGTGGACACCTATGTTCGGTTGACGT TTCACTTAAATATCCGAATTAATTGCTAGCTTTAGTTGTAGCCGGCCCGG GATTGGATTCTTATCCGGTGTTATTATTGTTCCGCAGGAACTCGAGTCTG GTGTTTTTTAGTTTTTTGTATGTAGTGGGTTGTTGGATGGGTGCTCTTTT GTGAGGATTTGTGTACATGTAAATGAAACAGTACAAATCGTGGAGACAGC TTGTATGTGATAATAAAAAGAGCGAAATGCTACTGGATGTATTTGCTGGT CATCAGGCCCAAAATCGAGCACAAGTAAGTATGATGCATGGCGTGAAGAA GGGTCATTATTCAACAGGAAAAAAACAAGAACTACTGATTGCCATAAAAT CAATCAATTAATCAACCAGTAAATCAATTTGCAGGAGGACGAGGGCCGTC AGCAAGCGCGCGAGCGTGGCGGCATTCGGGCAAAAAGACCGCACAACGTT AAGAAGGCTCATTATTTTATTCAAGATGAAACCACTTAAATCGCGATGAA ACCAACCAACTAATCTATCAATTGAACCAATCAACCAATTTGCAGGAGGA CGACGCCGCCAGCAAGCGCGCGGGTGCGGAGGAATTTGGGAAGAACGCCT CCGCCGCCGCGGGCAAGGTTTCGGCCGCCGTGGCCCGTTTCACGGGGGTG CATGAGGACGGGTGTGATGGCCTACGGAAGAAGTTGAACGCGGCTGAGGG GGCAGCAAGGTGTGCGGCGCGAGAGCTGTCTG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig7030:587..11168-

>mRNA_H-paniculata_contig7030.14982.1 ID=mRNA_H-paniculata_contig7030.14982.1|Name=mRNA_H-paniculata_contig7030.14982.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2574bp|location=Sequence derived from alignment at H-paniculata_contig7030:587..11168- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GATTTCCAATCAGGGGTGGTTTGCTGCGGACTAGAGGAGGTCCAAGTTCT
CACCGCAAAGGACATCTTCACCATCCTCGGAAAGGGTATCCAACAGCGCA
AAACAGCCGAGACATTGATGAACAAGAATTCTTCCCGAAGTCATTCCATC
TTTACCCTAAAGATTATGATCAAGGAGTGCATGCCGGATGGGCAGGAGGC
AATGCGGCACGGCCAACTTAACCTTGTCGATCTCGCCGGGATTTCCAATC
AGGGGTGGTTTGCTGCGGACTAGAGGAGGTCCAAGTTCTCACCGCAAAGG
ACATCTTCACCATCCTCGGAAAGGGTATCCAACAGCGCAAAACAGCCGAG
ACATTGATGAACAAGAATTCTTCCCGAAGTCATTCCATCTTTACCCTAAA
GATTATGATCAAGGAGTGCATGCCGGATGGGCAGGAGGCAATGCGGCACG
GCCAACTTAACCTTGTCGATCTCGCCGGGTCGGAGTGCGTCGGGCGGTCA
GGCGCGAAGAATGCGCGAGCGCGGGAGGCGGGCAACATCAACCAGAGCTT
GCTCACGCTTGGAAGGGTCATCACCGCCCTGGTCGAGCACCACCCCCACG
TGCCCTATCGCGACTCCAAGCTGACGCGCCTCCTGCAGGAGAGCCTGGGA
GGCAGAGCCAAGACGTGCATCATTGCAACAGTTACTTCTTCCTCGGTCGG
AGTGCGTCGGGCGGTCAGGCGCGAAGAATGCGCGAGCGCGGGAGGCGGGC
AACATCAACCAGAGCTTGCTCACGCTTGGAAGGGTCATCACCGCCCTGGT
CGAGCACCACCCCCACGTGCCCTATCGCGACTCCAAGCTGACGCGCCTCC
TGCAGGAGAGCCTGGGAGGCAGAGCCAAGACGTGCATCATTGCAACAGTT
ACTTCTTCCTCGGATGCGCTCGAGGAAACCCTAAGCTCCTTGGACTACGC
GATGAAGGCGAAAAATATCGAGAATAAACCGGTTGCGAACCAGAAGCTCA
GCAAGGTCCACCTGCTCAGGGAATACGCCGGCGAGGATGCGCTCGAGGAA
ACCCTAAGCTCCTTGGACTACGCGATGAAGGCGAAAAATATCGAGAATAA
ACCGGTTGCGAACCAGAAGCTCAGCAAGGTCCACCTGCTCAGGGAATACG
CCGGCGAGGTGGAGAGCCTTCGGTCCATGCTGCAGGCATCACGGGACAAG
AACGGCGTGTACATGGAGCCGTGGCGGTTCGAGCAGATGGAGAACACGTT
AGCGTCACAGACCAACCAGGTGGAGAGCCTTCGGTCCATGCTGCAGGCAT
CACGGGACAAGAACGGCGTGTACATGGAGCCGTGGCGGTTCGAGCAGATG
GAGAACACGTTAGCGTCACAGACCAACCAGCTGGTGGAGTTTGAGGCGAT
TTTGTCTGCCCGGAGCAACGAGACGAAGGAGCTAAAGCTGGTGGAGTTTG
AGGCGATTTTGTCTGCCCGGAGCAACGAGACGAAGGAGCTAAAGGCGGAC
AGAGATGCTTTCCAAGACCAGGTCACCGAGTTGGAAGGAGAGCTGGAAGA
GTCCCATCAGAAAGAAGAGAACACAAGGGCTCAGTTAGCGGAGACCGGGC
GGCGCCTTCAGGCGGACAGAGATGCTTTCCAAGACCAGGTCACCGAGTTG
GAAGGAGAGCTGGAAGAGTCCCATCAGAAAGAAGAGAACACAAGGGCTCA
GTTAGCGGAGACCGGGCGGCGCCTTCAGAGGGTCGAGGACGAACTAGCGG
CTTCGAGGGCCGAGGTGGAGCAGCTGAAAAAGGACCTAGCGGCTAGTCAG
CACAAATTACAGAGGGTCGAGGACGAACTAGCGGCTTCGAGGGCCGAGGT
GGAGCAGCTGAAAAAGGACCTAGCGGCTAGTCAGCACAAATTACAGGTGA
CGGAGGGAGAGCTGGCGGCGACGAGGGCTGTGGTGACCGAGCAAACAGCG
ACAGAGGCCAACCTGAGGTCGGAGGCGGGGCAAACGAAGCGCTCCTTGGA
GCTGGCTGAGACAGATGTAGAAGGACTCCGAGCCAAGGTTGCAAGACAGG
TGACGGAGGGAGAGCTGGCGGCGACGAGGGCTGTGGTGACCGAGCAAACA
GCGACAGAGGCCAACCTGAGGTCGGAGGCGGGGCAAACGAAGCGCTCCTT
GGAGCTGGCTGAGACAGATGTAGAAGGACTCCGAGCCAAGGTTGCAAGAC
AGGAGGACGACGCCGCCAGCAAGCGCGCGGGTGCGGAGGAATTTGGGAAG
AACGCCTCCGCCGCCGCGGGCAAGGTTTCGGCCGCCGTGGCCCGTTTCAC
GGGGGTGCATGAGGACGGGTGTGATGGCCTACGGAAGAAGTTGAACGCGG
CTGAGGGGGCAGCAAGGTGTGCGGCGCGAGAGCTGTCTGAGGACGACGCC
GCCAGCAAGCGCGCGGGTGCGGAGGAATTTGGGAAGAACGCCTCCGCCGC
CGCGGGCAAGGTTTCGGCCGCCGTGGCCCGTTTCACGGGGGTGCATGAGG
ACGGGTGTGATGGCCTACGGAAGAAGTTGAACGCGGCTGAGGGGGCAGCA
AGGTGTGCGGCGCGAGAGCTGTCT
back to top