mRNA_H-paniculata_contig6971.14914.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6971.14914.1 vs. uniprot
Match: A0A6H5KI28_9PHAE (EngB-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KI28_9PHAE) HSP 1 Score: 267 bits (682), Expect = 4.170e-83 Identity = 135/242 (55.79%), Postives = 166/242 (68.60%), Query Frame = 1
Query: 199 MRAPAVLRSLPVQLAVATKSPWVYTVQGVNPDAILHPPGRLS--SLRGEFTSPESLNFELPRNGRPELAFAGRSNAGKSTLIGKIIGTSKLVRTSKQPGCTKTINFFALRGDGAGPPQSYLVDLPGYGFAREKREAVREWAAVVRGYLKERPCNVLRRAFVLVDSRHGLQRGDRHILSTLDESGVSTQIILTKVDKVQPAVLLKAVEGVCQSLLLHQSCFPVVHCVSARTGLGMAELTNTVW 918
MR+ A R L QL+VAT SPWV+ GV+P + +HPP R SLRGE+ SP S N ELP G PE+AF GRSN GKSTL+GK++G KLVR SK PGCTKT+N+FALR GA PQ++LVDLPGYGFARE + AVR W V YL+ R +VLRR FVLVD RHGLQ D +LS L V ++LTKVDK PA L++++EG Q + H + P+VHC+SA G GM E NT++
Sbjct: 1 MRSSAAFRRLRGQLSVATSSPWVWVATGVDPASAIHPPPRKRGLSLRGEYVSPASFNHELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALREGGAESPQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLEGAFQLAVHHPATLPIVHCISAHKGQGMGEFQNTLY 242
BLAST of mRNA_H-paniculata_contig6971.14914.1 vs. uniprot
Match: A0A835YYM3_9STRA (YihA2, YihA/EngB-like GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYM3_9STRA) HSP 1 Score: 211 bits (536), Expect = 2.930e-61 Identity = 103/237 (43.46%), Postives = 154/237 (64.98%), Query Frame = 1
Query: 250 TKSPWVYTVQGVNPDAILHPPGR-----LSSLRGEFTSPESLNFELPRNGRPELAFAGRSNAGKSTLIGKIIGTSKLVRTSKQPGCTKTINFFAL-------RGDGAGPPQSYLVDLPGYGFAREKREAVREWAAVVRGYLKERPCNVLRRAFVLVDSRHGLQRGDRHILSTLDESGVSTQIILTKVDKVQPAVLLKAVEGVCQSLLLHQSCFPVVHCVSARTGLGMAELTNTVWHL 924
TKSPWV+T++G++ D+ +H +++ F P F+LP+ G PE+AF GRSN GKSTL+G +I +KLVR SK+PGCT+T+N+F L +G Y+VDLPGYGFA+ + V+ W A V G++ R C +LRR FVL+D RHG+++ D +++ LD+ GVS QI+LTK D++ + VEGV ++ H +C+PVVH VSAR G G+ +L +T++++
Sbjct: 3 TKSPWVWTMKGMDADSAVHRTDPDIARGCRAMQAGFFPPNLFKFDLPKAGVPEVAFCGRSNVGKSTLVGTLINNTKLVRASKEPGCTRTVNYFGLTAPTRIKKGSEVDRAAVYMVDLPGYGFAKAPVQEVQAWTAAVEGFIVNRDCALLRRTFVLIDGRHGVKQHDEDMMTLLDDHGVSYQIVLTKADQLTKRDIAVVVEGVMRAAARHAACYPVVHVVSARDGHGVLQLLDTIYYV 239
BLAST of mRNA_H-paniculata_contig6971.14914.1 vs. uniprot
Match: A0A061QDS3_9PROT (Probable GTP-binding protein EngB n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A061QDS3_9PROT) HSP 1 Score: 157 bits (398), Expect = 1.800e-41 Identity = 85/186 (45.70%), Postives = 111/186 (59.68%), Query Frame = 1
Query: 370 LPRNGRPELAFAGRSNAGKSTLIGKIIGTSKLVRTSKQPGCTKTINFFALRGDGAGPPQSYLVDLPGYGFAREKREAVREWAAVVRGYLKERPCNVLRRAFVLVDSRHGLQRGDRHILSTLDESGVSTQIILTKVDKVQPAVLLKAVEGVCQSLLLHQSCFPVVHCVSARTGLGMAELTNTVWHLC 927
LP G PELAFAGRSN GKS+LI + G + L RTS PG T+ +NFF L G P LVDLPGYG+A+ R V+ W +R YL+ R L+R VL+DSRHG++ DR I+ LDE+ VS QI+LTK+DK+ ++ V Q + +C P +H SA G G+AEL + C
Sbjct: 42 LPAPGHPELAFAGRSNVGKSSLINALTGRNTLARTSNTPGRTQELNFFRL---GVDPRPLILVDLPGYGYAKVTRSKVKAWTGTIRDYLRGR--QTLKRVMVLIDSRHGIKDNDREIMKMLDEAAVSYQIVLTKLDKLSRTDQSLIIDKVNQQARVFVACHPHIHATSAEKGTGIAELRADIARFC 222
BLAST of mRNA_H-paniculata_contig6971.14914.1 vs. uniprot
Match: A0A2W4KWF0_9PROT (Probable GTP-binding protein EngB n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4KWF0_9PROT) HSP 1 Score: 157 bits (396), Expect = 3.820e-41 Identity = 83/186 (44.62%), Postives = 113/186 (60.75%), Query Frame = 1
Query: 370 LPRNGRPELAFAGRSNAGKSTLIGKIIGTSKLVRTSKQPGCTKTINFFALRGDGAGPPQSYLVDLPGYGFAREKREAVREWAAVVRGYLKERPCNVLRRAFVLVDSRHGLQRGDRHILSTLDESGVSTQIILTKVDKVQPAVLLKAVEGVCQSLLLHQSCFPVVHCVSARTGLGMAELTNTVWHLC 927
LP RPE+AFAGRSN GKS+LI ++G + L RTS PG T+ +NFFA YLVD+PGYGFA+ +E V+ W +VR YL+ RP L+R F+L+DSRHG++ DR I+ LDE+ VS QI+LTK DK L + +++ H + +P + SA G G+ L T+ LC
Sbjct: 45 LPDADRPEIAFAGRSNVGKSSLINALVGQNGLARTSNTPGRTQELNFFATANVAL-----YLVDMPGYGFAQAPKEKVKAWTELVRNYLRGRP--TLKRVFLLIDSRHGIKSNDREIMEMLDEAAVSYQIVLTKADKPNLRQLRSVITATYETIASHPAAYPEILVTSAEKGQGIDVLRATIAELC 223
BLAST of mRNA_H-paniculata_contig6971.14914.1 vs. uniprot
Match: A0A482SLS6_9ARCH (Probable GTP-binding protein EngB n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SLS6_9ARCH) HSP 1 Score: 158 bits (400), Expect = 3.850e-41 Identity = 84/199 (42.21%), Postives = 122/199 (61.31%), Query Frame = 1
Query: 316 RLSSLRGEFTSPESLNFELPRNGRPELAFAGRSNAGKSTLIGKIIGTSKLVRTSKQPGCTKTINFFAL-RGDGAGPPQSYLVDLPGYGFAREKREAVREWAAVVRGYLKERPCNVLRRAFVLVDSRHGLQRGDRHILSTLDESGVSTQIILTKVDKVQPAVLL-KAVEGVCQ-SLLLHQSCFPVVHCVSARTGLGMAEL 903
++ SL + P N +LP GRPE+AF GRSN GKS+L+ ++GT L+R SK+PGCT T+N++AL +G YL+D+PGYGFA+ ++ ++W +V YL R +LRR FVL+DSR G+Q D ++ L+ + + Q++LTK D V + K E C S + SC P+VH VSA GLG+ +L
Sbjct: 67 KIFSLNPTYIPPSYFNHQLPSAGRPEVAFVGRSNVGKSSLVEALLGTKGLLRISKEPGCTTTLNYYALAKGSALDDHACYLIDMPGYGFAKIAKQQQKKWLEIVNSYLMNRDQLLLRRVFVLIDSRRGVQMQDVEMMEMLNHAHIPYQVVLTKKDLVSDKEIKEKLFELFCVISRKKNNSCLPLVHVVSALKGLGLEDL 265
BLAST of mRNA_H-paniculata_contig6971.14914.1 vs. uniprot
Match: A0A2E1XCC7_9PROT (Probable GTP-binding protein EngB n=1 Tax=Parvularcula sp. TaxID=1979207 RepID=A0A2E1XCC7_9PROT) HSP 1 Score: 155 bits (393), Expect = 7.310e-41 Identity = 83/178 (46.63%), Postives = 112/178 (62.92%), Query Frame = 1
Query: 370 LPRNGRPELAFAGRSNAGKSTLIGKIIGTSKLVRTSKQPGCTKTINFFALRGDGAGPPQSYLVDLPGYGFAREKREAVREWAAVVRGYLKERPCNVLRRAFVLVDSRHGLQRGDRHILSTLDESGVSTQIILTKVDKVQPAVLLKAVEGVCQSLLLHQSCFPVVHCVSARTGLGMAEL 903
LP G E+AFAGRSN GKSTL+ + G + L R S PG T+ IN+F L G LVDLPGYG+A+ R+ V W A+ R +L+ R +VLRR VLVDSRHGL++ DR ++ LDE+ V+ QI+LTK DK++P L K +E Q ++ + P+V S+ G G+AEL
Sbjct: 36 LPDEGPAEVAFAGRSNVGKSTLLNALTGQNGLARASNTPGRTREINYFDLEG------AMRLVDLPGYGYAKASRKDVERWTALTRDFLRGR--SVLRRVCVLVDSRHGLKQTDREVMDLLDEAAVNYQIVLTKTDKIKPTALEKLIEATGQQIMKRPAAHPIVRATSSEKGDGIAEL 205
BLAST of mRNA_H-paniculata_contig6971.14914.1 vs. uniprot
Match: UPI0012E7BCFD (ribosome biogenesis GTP-binding protein YihA/YsxC n=1 Tax=Sphingomonas profundi TaxID=2681549 RepID=UPI0012E7BCFD) HSP 1 Score: 154 bits (390), Expect = 2.360e-40 Identity = 91/207 (43.96%), Postives = 122/207 (58.94%), Query Frame = 1
Query: 316 RLSSLRGEFTSP-------ESLNFELPRNGRPELAFAGRSNAGKSTLIGKIIGTSKLVRTSKQPGCTKTINFFALRGDGAGPPQSYLVDLPGYGFAREKREAVREWAAVVRGYLKERPCNVLRRAFVLVDSRHGLQRGDRHILSTLDESGVSTQIILTKVDKVQPAVLLKAVEGVCQSLLLHQSCFPVVHCVSARTGLGMAELTNTV 915
R+ + R F P SLNF LP E+AFAGRSN GKS+L+ + G + L RTS PG T+ +NFF D PP LVD+PGYGFA+ ++ VR+W +V YL+ RP VL+RA VLVDSRHGL+ DR ++ LD++ VS +++LTK DKV+ + L E H + P + S+ TGLG+AEL V
Sbjct: 17 RIEAARRLFAGPVAFLKSAPSLNF-LPDAAASEVAFAGRSNVGKSSLLNALTGRNALARTSNTPGRTQELNFF----DVGEPPAFRLVDMPGYGFAKAPKDVVRKWKFLVNDYLRGRP--VLKRALVLVDSRHGLKDVDRELMDMLDKAAVSYRLVLTKADKVKASDLAAVTEATAAEARRHVAAHPEILVTSSETGLGIAELRAAV 216
BLAST of mRNA_H-paniculata_contig6971.14914.1 vs. uniprot
Match: A0A2U1W0M8_9PROT (Probable GTP-binding protein EngB n=1 Tax=Azospirillum sp. TSO22-1 TaxID=716789 RepID=A0A2U1W0M8_9PROT) HSP 1 Score: 154 bits (390), Expect = 2.430e-40 Identity = 87/179 (48.60%), Postives = 113/179 (63.13%), Query Frame = 1
Query: 367 ELPRNGRPELAFAGRSNAGKSTLIGKIIGTSKLVRTSKQPGCTKTINFFALRGDGAGPPQSYLVDLPGYGFAREKREAVREWAAVVRGYLKERPCNVLRRAFVLVDSRHGLQRGDRHILSTLDESGVSTQIILTKVDKVQPAVLLKAVEGVCQSLLLHQSCFPVVHCVSARTGLGMAEL 903
+LP PE+AFAGRSN GKS+LI + G L RTS PG T+ +NFF L G + LVD+PGYG+A+E ++ V W +VR +LK R VLRRA VL+DSRHGL+ D+ IL+ LD++ V QI+LTK DKV+P L +L H + FP VH S+ GLG+AEL
Sbjct: 42 QLPEATLPEVAFAGRSNVGKSSLINALTGRRTLARTSNTPGRTQQLNFFDLGG------RLRLVDMPGYGYAKEAKDKVEAWNTLVRRFLKGRV--VLRRALVLIDSRHGLKPNDQEILTMLDQAAVPYQIVLTKADKVKPQALENIRIQTLAALKKHPAAFPEVHVTSSDKGLGIAEL 212
BLAST of mRNA_H-paniculata_contig6971.14914.1 vs. uniprot
Match: A0A6C1SS75_9PROT (Probable GTP-binding protein EngB n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6C1SS75_9PROT) HSP 1 Score: 154 bits (389), Expect = 4.760e-40 Identity = 82/179 (45.81%), Postives = 108/179 (60.34%), Query Frame = 1
Query: 367 ELPRNGRPELAFAGRSNAGKSTLIGKIIGTSKLVRTSKQPGCTKTINFFALRGDGAGPPQSYLVDLPGYGFAREKREAVREWAAVVRGYLKERPCNVLRRAFVLVDSRHGLQRGDRHILSTLDESGVSTQIILTKVDKVQPAVLLKAVEGVCQSLLLHQSCFPVVHCVSARTGLGMAEL 903
++P PE+AFAGRSN GKS+L+ ++G L RTS PG T+ +NFF L + L DLPGYGFA+ ++ V W A+V+ YLK RP LRRA +L+D+RHG++ DR I++ LD + VS Q +LTK DKV+P L L H + P V SA TG GMAEL
Sbjct: 48 QIPETTLPEVAFAGRSNVGKSSLVNALVGQRMLARTSNTPGRTQLLNFFDLDS------RLMLTDLPGYGFAKAPKDRVERWTALVQAYLKGRP--PLRRALLLIDARHGIKAVDRGIMTLLDSAAVSYQAVLTKADKVRPGTLASVTAATVSELASHTAAHPEVQVTSAHTGSGMAEL 218
BLAST of mRNA_H-paniculata_contig6971.14914.1 vs. uniprot
Match: A0A7X4EQK0_9PROT (Probable GTP-binding protein EngB n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A7X4EQK0_9PROT) HSP 1 Score: 153 bits (387), Expect = 6.380e-40 Identity = 83/178 (46.63%), Postives = 110/178 (61.80%), Query Frame = 1
Query: 370 LPRNGRPELAFAGRSNAGKSTLIGKIIGTSKLVRTSKQPGCTKTINFFALRGDGAGPPQSYLVDLPGYGFAREKREAVREWAAVVRGYLKERPCNVLRRAFVLVDSRHGLQRGDRHILSTLDESGVSTQIILTKVDKVQPAVLLKAVEGVCQSLLLHQSCFPVVHCVSARTGLGMAEL 903
LP + PE+AFAGRSN GKS+LI + G L RTS PG T+ +NFF L G + YLVDLPGYG+AR ++ VR W A++R YL+ R LRR +L+D+R GL GDR I+ LD + VS QI+LTK DK+ + L + G ++ H +C P + SA G G+AEL
Sbjct: 41 LPPDALPEIAFAGRSNVGKSSLINALTGRKALARTSNTPGRTQQVNFFDLGG------RLYLVDLPGYGYARASKDKVRRWNALIRDYLRGR--TGLRRVCLLIDTRRGLTPGDREIMELLDAAAVSYQIVLTKSDKLHESELAACLAGTARTAARHPACHPDIAATSAEKGSGIAEL 210 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6971.14914.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6971.14914.1 >prot_H-paniculata_contig6971.14914.1 ID=prot_H-paniculata_contig6971.14914.1|Name=mRNA_H-paniculata_contig6971.14914.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=260bp MRAPAVLRSLPVQLAVATKSPWVYTVQGVNPDAILHPPGRLSSLRGEFTSback to top mRNA from alignment at H-paniculata_contig6971:2810..7787+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6971.14914.1 ID=mRNA_H-paniculata_contig6971.14914.1|Name=mRNA_H-paniculata_contig6971.14914.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4978bp|location=Sequence derived from alignment at H-paniculata_contig6971:2810..7787+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6971:2810..7787+ >mRNA_H-paniculata_contig6971.14914.1 ID=mRNA_H-paniculata_contig6971.14914.1|Name=mRNA_H-paniculata_contig6971.14914.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1560bp|location=Sequence derived from alignment at H-paniculata_contig6971:2810..7787+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |