mRNA_H-paniculata_contig6968.14908.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6968.14908.1 vs. uniprot
Match: A0A6H5K608_9PHAE (Acetyl-CoA carboxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K608_9PHAE) HSP 1 Score: 167 bits (424), Expect = 2.960e-46 Identity = 84/95 (88.42%), Postives = 89/95 (93.68%), Query Frame = 1
Query: 1 VQDVIGEEPDLGVENLQGSGRIAGETAVAYKDVFTLTLVVGRTVGIGAYLVRLGQRTIQKQTASPILLTGYQALNTLMGREVYTSNDQLGGASVM 285
+ DVIGEEPDLGVENLQGSGRIAGET+ AY DVFTLTLV+GRTVGIGAYLVRLGQRTIQK +ASPILLTGYQALNTLMGREVYTSN+QLGG VM
Sbjct: 1724 ILDVIGEEPDLGVENLQGSGRIAGETSSAYSDVFTLTLVLGRTVGIGAYLVRLGQRTIQKASASPILLTGYQALNTLMGREVYTSNEQLGGTGVM 1818
BLAST of mRNA_H-paniculata_contig6968.14908.1 vs. uniprot
Match: A0A7S0C3E3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C3E3_9STRA) HSP 1 Score: 153 bits (387), Expect = 6.140e-43 Identity = 73/95 (76.84%), Postives = 87/95 (91.58%), Query Frame = 1
Query: 1 VQDVIGEEPDLGVENLQGSGRIAGETAVAYKDVFTLTLVVGRTVGIGAYLVRLGQRTIQKQTASPILLTGYQALNTLMGREVYTSNDQLGGASVM 285
+ DVIG EPDLGVENL+GSG IAGET+ AY+D+FT+T+V+GRTVGIGAYLVRLGQRTIQK+T+SPI+LTGYQALN LMG EVY++NDQLGG +M
Sbjct: 168 ITDVIGSEPDLGVENLKGSGLIAGETSSAYEDIFTMTIVLGRTVGIGAYLVRLGQRTIQKKTSSPIILTGYQALNKLMGCEVYSTNDQLGGPGIM 262
BLAST of mRNA_H-paniculata_contig6968.14908.1 vs. uniprot
Match: A0A835YMY6_9STRA (Acetyl-CoA carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMY6_9STRA) HSP 1 Score: 155 bits (392), Expect = 6.100e-42 Identity = 79/94 (84.04%), Postives = 86/94 (91.49%), Query Frame = 1
Query: 7 DVIGEEPDLGVENLQGSGRIAGETAVAYKDVFTLTLVVGRTVGIGAYLVRLGQRTIQKQTASPILLTGYQALNTLMGREVYTSNDQLGGA-SVM 285
++IG+EPDLGVENL+GSG IAGET+ AY DVFTLTLVVGR+VGIGAYLVRLGQRTIQ TA+PILLTGYQALNTLMGREVY SNDQLGG SVM
Sbjct: 1725 EIIGDEPDLGVENLRGSGAIAGETSAAYNDVFTLTLVVGRSVGIGAYLVRLGQRTIQNVTAAPILLTGYQALNTLMGREVYASNDQLGGGQSVM 1818
BLAST of mRNA_H-paniculata_contig6968.14908.1 vs. uniprot
Match: A0A482STZ8_9ARCH (Acetyl-CoA carboxylase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482STZ8_9ARCH) HSP 1 Score: 155 bits (391), Expect = 8.300e-42 Identity = 75/95 (78.95%), Postives = 84/95 (88.42%), Query Frame = 1
Query: 1 VQDVIGEEPDLGVENLQGSGRIAGETAVAYKDVFTLTLVVGRTVGIGAYLVRLGQRTIQKQTASPILLTGYQALNTLMGREVYTSNDQLGGASVM 285
+ D+IGEEPDLGVENL GSG IAGETA AY ++FTLTLVVGRTVGIGAYLVRLGQRTIQK +PI+LTGYQALN LMGRE+YT+NDQLGG +M
Sbjct: 1661 IDDIIGEEPDLGVENLMGSGLIAGETARAYNEIFTLTLVVGRTVGIGAYLVRLGQRTIQKTRHAPIILTGYQALNKLMGREIYTTNDQLGGPMIM 1755
BLAST of mRNA_H-paniculata_contig6968.14908.1 vs. uniprot
Match: A0A7S3LZP0_9STRA (Acetyl-CoA carboxylase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LZP0_9STRA) HSP 1 Score: 155 bits (391), Expect = 8.330e-42 Identity = 75/95 (78.95%), Postives = 84/95 (88.42%), Query Frame = 1
Query: 1 VQDVIGEEPDLGVENLQGSGRIAGETAVAYKDVFTLTLVVGRTVGIGAYLVRLGQRTIQKQTASPILLTGYQALNTLMGREVYTSNDQLGGASVM 285
+ D+IGEEPDLGVENL GSG IAGETA AY ++FTLTLVVGRTVGIGAYLVRLGQRTIQK +PI+LTGYQALN LMGRE+YT+NDQLGG +M
Sbjct: 1753 IDDIIGEEPDLGVENLMGSGLIAGETARAYNEIFTLTLVVGRTVGIGAYLVRLGQRTIQKTRNAPIILTGYQALNKLMGREIYTTNDQLGGPMIM 1847
BLAST of mRNA_H-paniculata_contig6968.14908.1 vs. uniprot
Match: A0A7S4MUC6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MUC6_9STRA) HSP 1 Score: 153 bits (387), Expect = 1.090e-41 Identity = 75/93 (80.65%), Postives = 84/93 (90.32%), Query Frame = 1
Query: 7 DVIGEEPDLGVENLQGSGRIAGETAVAYKDVFTLTLVVGRTVGIGAYLVRLGQRTIQKQTASPILLTGYQALNTLMGREVYTSNDQLGGASVM 285
DVIG EPDLGVENL+GSG IAGET+ AY D+FTLT+V+GRTVGIGAYLVRLGQRTIQK TASPI+LTGYQALN LMG +VYT+NDQLGG +M
Sbjct: 151 DVIGSEPDLGVENLKGSGLIAGETSSAYNDIFTLTVVLGRTVGIGAYLVRLGQRTIQKTTASPIILTGYQALNKLMGCDVYTTNDQLGGPGIM 243
BLAST of mRNA_H-paniculata_contig6968.14908.1 vs. uniprot
Match: A0A1E7EQN9_9STRA (Acetyl-CoA carboxylase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EQN9_9STRA) HSP 1 Score: 154 bits (390), Expect = 1.140e-41 Identity = 74/95 (77.89%), Postives = 86/95 (90.53%), Query Frame = 1
Query: 1 VQDVIGEEPDLGVENLQGSGRIAGETAVAYKDVFTLTLVVGRTVGIGAYLVRLGQRTIQKQTASPILLTGYQALNTLMGREVYTSNDQLGGASVM 285
V D+IG EPDLGVENL+GSG IAGET+ AYKD+FTLT+V+GRTVGIGAYLVRLGQRTIQK T+SPI+LTGYQALN LMG +VY++NDQLGG +M
Sbjct: 1754 VTDIIGSEPDLGVENLKGSGLIAGETSAAYKDIFTLTIVLGRTVGIGAYLVRLGQRTIQKTTSSPIILTGYQALNKLMGVDVYSTNDQLGGPGIM 1848
BLAST of mRNA_H-paniculata_contig6968.14908.1 vs. uniprot
Match: A0A7S2V2G8_9STRA (Acetyl-CoA carboxylase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2G8_9STRA) HSP 1 Score: 154 bits (390), Expect = 1.140e-41 Identity = 74/95 (77.89%), Postives = 85/95 (89.47%), Query Frame = 1
Query: 1 VQDVIGEEPDLGVENLQGSGRIAGETAVAYKDVFTLTLVVGRTVGIGAYLVRLGQRTIQKQTASPILLTGYQALNTLMGREVYTSNDQLGGASVM 285
+ D++G EPDLGVENL GSG IAGET+ AY+D+FTLTLVVGR+VGIGAYLVRLGQRTIQK+T SPI+LTGYQALN LMGRE+Y SNDQLGGA +
Sbjct: 1784 ITDIVGSEPDLGVENLSGSGLIAGETSKAYEDIFTLTLVVGRSVGIGAYLVRLGQRTIQKETESPIILTGYQALNKLMGRELYQSNDQLGGAGAV 1878
BLAST of mRNA_H-paniculata_contig6968.14908.1 vs. uniprot
Match: A0A7S1BIY5_9STRA (Acetyl-CoA carboxylase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BIY5_9STRA) HSP 1 Score: 153 bits (386), Expect = 3.930e-41 Identity = 73/93 (78.49%), Postives = 84/93 (90.32%), Query Frame = 1
Query: 7 DVIGEEPDLGVENLQGSGRIAGETAVAYKDVFTLTLVVGRTVGIGAYLVRLGQRTIQKQTASPILLTGYQALNTLMGREVYTSNDQLGGASVM 285
D+IG EPDLGVENL+GSG IAGET+ AY D+FT+T+V+GRTVGIGAYLVRLGQRTIQK TASPI+LTGYQALN LMG +VYT+NDQLGG +M
Sbjct: 1591 DIIGTEPDLGVENLKGSGLIAGETSAAYNDIFTMTIVLGRTVGIGAYLVRLGQRTIQKTTASPIILTGYQALNKLMGCDVYTTNDQLGGPGIM 1683
BLAST of mRNA_H-paniculata_contig6968.14908.1 vs. uniprot
Match: A0A448ZHH5_9STRA (Acetyl-CoA carboxylase n=3 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448ZHH5_9STRA) HSP 1 Score: 153 bits (386), Expect = 3.930e-41 Identity = 74/95 (77.89%), Postives = 85/95 (89.47%), Query Frame = 1
Query: 1 VQDVIGEEPDLGVENLQGSGRIAGETAVAYKDVFTLTLVVGRTVGIGAYLVRLGQRTIQKQTASPILLTGYQALNTLMGREVYTSNDQLGGASVM 285
V D+IG EPDLGVENL+GSG IAGET+ AY D+FTLT+V+GRTVGIGAYLVRLGQRTIQK TASPI+LTGYQALN LMG +VY++NDQLGG +M
Sbjct: 1679 VTDIIGSEPDLGVENLKGSGLIAGETSSAYNDIFTLTIVLGRTVGIGAYLVRLGQRTIQKTTASPIILTGYQALNKLMGVDVYSTNDQLGGPGIM 1773 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6968.14908.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6968.14908.1 >prot_H-paniculata_contig6968.14908.1 ID=prot_H-paniculata_contig6968.14908.1|Name=mRNA_H-paniculata_contig6968.14908.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=95bp VQDVIGEEPDLGVENLQGSGRIAGETAVAYKDVFTLTLVVGRTVGIGAYLback to top mRNA from alignment at H-paniculata_contig6968:10584..11798- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6968.14908.1 ID=mRNA_H-paniculata_contig6968.14908.1|Name=mRNA_H-paniculata_contig6968.14908.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1215bp|location=Sequence derived from alignment at H-paniculata_contig6968:10584..11798- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6968:10584..11798- >mRNA_H-paniculata_contig6968.14908.1 ID=mRNA_H-paniculata_contig6968.14908.1|Name=mRNA_H-paniculata_contig6968.14908.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=570bp|location=Sequence derived from alignment at H-paniculata_contig6968:10584..11798- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |