mRNA_H-paniculata_contig693.14869.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig693.14869.1
Unique NamemRNA_H-paniculata_contig693.14869.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig693.14869.1 vs. uniprot
Match: A0A6H5K2F3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2F3_9PHAE)

HSP 1 Score: 353 bits (905), Expect = 2.450e-115
Identity = 182/432 (42.13%), Postives = 239/432 (55.32%), Query Frame = 1
Query:    1 GCPFVVPEEERALAIAADGSLPGNTLTVEHLRMGRTGNHFSTVYRNLALGYCCKSRLVTLPPKDDVLAPGMFSLGEHGPRWFDFSQAPDVENFNSSSCT-DITWWGVQAFRMAYLEDPERKEYNPGLYQCIKRVPRMVGCEATYFFAKDTNVC-AT-----------------------------------------------------------------------------------------------YKKNNVRDGNLVITIRSGDIFKDSVLGYYGQPPLQMYHLAIMDKDWDRVDIVTAYQDEEEVNPVIPALQQRIREGVYENKIVIHTNRTLADDMQAMMCADALATARSTLSHLVAYHTIAKVIYGHNRCDGMLNEMAIARSDAKVYGFDWKGQYSVFQNWQNTVDQREEMLSYSAMTGFVQC 1005
            GCP+V+   E A++   D SLPGN + VEHL   RTGNHFS+ +RNLALGYCCKS++V LPPKDDVLAPG+F+ G  GPRWFDFS APDV+ F+SS+C+ DITW G +AF M  L+ PE + + PGL +CI R PR++ CEA Y+F KD ++C AT                                                                                                      DGNLV+ +RSGDIF D VL YYGQPPLQ Y   I   DWD VDIVT  Q+ + +NPVIPALQ  +  G   + + +HTNRT+ +D+ +M CAD LA ARSTL  L  +H+ AK +YG ++C+    ++A+ R + + YG DW G+Y V+++W+NT +QREEML+Y  + GF QC
Sbjct:   93 GCPYVIDTAEEAISRIKDKSLPGNVVKVEHLTFCRTGNHFSSFFRNLALGYCCKSKVVWLPPKDDVLAPGVFNQGTPGPRWFDFSSAPDVDGFDSSACSADITWAGQRAFHMHQLDSPEHEFHTPGLKECIARAPRLLACEAAYYFPKDVDLCHATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNLVLHVRSGDIFSDKVLAYYGQPPLQFYLQVIQHADWDSVDIVTNSQEHDGLNPVIPALQAMVDAGDLPDSVHVHTNRTMEEDLLSMFCADGLALARSTLVSLTGFHSKAKRVYGPHQCNAQFKQLALIRPEVQAYGIDWAGEYGVYKSWENTPEQREEMLAYDKIVGFNQC 524          
BLAST of mRNA_H-paniculata_contig693.14869.1 vs. uniprot
Match: D7G610_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G610_ECTSI)

HSP 1 Score: 326 bits (836), Expect = 1.470e-106
Identity = 161/346 (46.53%), Postives = 221/346 (63.87%), Query Frame = 1
Query:    4 CPFVVPEEERALAIAADGSLPGNTLTVEHLRMGRTGNHFSTVYRNLALGYCCKSRLVTLPPKDDVLAPGMFSLGEHGPRWFDFSQAPDVENFNSSSCT-DITWWGVQAFRMAYLEDPERKEYNPGLYQCIKRVPRMVGCEATYFFAKDTNVCATYKKNNVR---------DGNLVITIRSGDIFKDSVLGYYGQPPLQMYHLAIMDKDWDRVDIVTAYQDEEEVNPVIPALQQRIREGVYENKIVIHTNRTLADDMQAMMCADALATARSTLSHLVAYHTIAKVIYGHNRCDGMLNEMAIARSDAKVYGF--DWKGQYSVFQNWQNTVDQREEMLSYSAMTGFVQC 1005
            C + +P  + A     D ++ GN + V HL+ GRTGN F  VYRNLALGYCCK++ V LPPKDDVLAPG+F+ G  GPRWFDFS APDV+  +   C  DI W    A +MA L++PER +Y P +  C+ + PR++GCEA Y+F +D  VC   KK  +           GNLV+ +RSGDIF D V+ Y GQPPLQ Y L + D+ WDR+D+VT  Q+ + VNPV+PAL      G   + +  HT R++ +D+Q+M+CAD+L  A+S+L + ++YH+ A  +Y   RC+  L E+A  R   KVYG   D  G YSV+++W+NT +QR EML Y+  T F +C
Sbjct:   59 CTYAIPNAKVARKQRHDSTIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVDGVDLGRCPIDIIWENRGAMQMAGLDNPERNKYLPHIRDCMAKAPRLLGCEAAYYFPQDIAVCPRKKKPFLALGDRNPPGGAGNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRIDVVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGLAKSSLVNFLSYHSTANRVYYPWRCNHDLRELARLRPKTKVYGLQLDRSGSYSVYRHWENTPEQRAEMLGYNVTTTFQRC 404          
BLAST of mRNA_H-paniculata_contig693.14869.1 vs. uniprot
Match: A0A6H5K7B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7B3_9PHAE)

HSP 1 Score: 292 bits (748), Expect = 1.450e-91
Identity = 161/394 (40.86%), Postives = 218/394 (55.33%), Query Frame = 1
Query:    4 CPFVVPEEERALAIAADGSLPGNTLTVEHLRMGRTGNHFSTVYRNLALGYCCKSRLVTLPPKDDVLAPGMFSLGEHGPRWFDFSQAPDVENFNSSSCT-DITWWGVQAFRMAYLEDPERKEYNPGLYQCIKRVPRMVGCEATYFFAKD--TNVCAT-------YKKNNVRD-----------------------------------------------GNLVITIRSGDIFKDSVLGYYGQPPLQMYHLAIMDKDWDRVDIVT--AYQDEEEVNPVIPALQQRIREGVYENKIVIHTNRTLADDMQAMMCADALATARSTLSHLVAYHTIAKVIYGHNRCDGMLNEMAIARSDAKVYGF-DWKGQYSVFQNWQNTVDQREEMLSYSAMTGFVQC 1005
            CP+ +P EE A   + + S PGN + V      R GN F+++ R+L+LGYCCKSRL++LPPKD+ LAPG F+ G  GPR FDFS APDVE F+ SSC  +ITW G  AF +  L D     Y P L++CIK +PR+ GCEA YFF KD   ++C         +  +NVRD                                               GNLV+ +RSGDIF      Y GQPPLQ Y  AI D++WDRVD+VT     +   +NPV+PAL+ ++ EG     I  H NRT+ +D++ M+CAD    ARSTL H+V++H+ AK +Y    C+  L  ++  R   +V+G   W  QY+V+Q W NT DQ  EM+++  + GF QC
Sbjct:  147 CPYAIPSEEEARERSGNTSAPGNVVVVTDFNYCRLGNRFTSMSRSLSLGYCCKSRLLSLPPKDEQLAPGRFNEGIPGPRNFDFSSAPDVEGFDYSSCPPEITWGGTNAFHLQGLRDEGHPYYTPELFECIKELPRIAGCEAAYFFPKDMAVDMCPLDETAERDHNNSNVRDVSEKPRDDAPGVRLDWGERGQGREATXXXXXXXXXXXXXXXXXEGSAGNLVVHVRSGDIFVRPHPDY-GQPPLQYYVRAIQDQEWDRVDVVTDGIVDETHAINPVVPALEAKVAEGELAGNIHFHKNRTIGEDLRYMICADGFVAARSTLRHVVSHHSSAKRMYFPMACNEKLKTLSTERPGTQVFGMASWNDQYTVYQRWNNTADQLTEMMTFD-VGGFEQC 538          
BLAST of mRNA_H-paniculata_contig693.14869.1 vs. uniprot
Match: D7G1L4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L4_ECTSI)

HSP 1 Score: 256 bits (654), Expect = 1.330e-77
Identity = 154/393 (39.19%), Postives = 205/393 (52.16%), Query Frame = 1
Query:    4 CPFVVPEEERALAIAADG------SLPGNTLTVEHLRMGRTGNHFSTVYRNLALGYCCKSRLVTLPPKDDVLAPGMFSLGEHGPRWFDFSQAPDVENFNSSSCT-DITWWGVQAFRMAYLEDPERKEYNPGLYQCIKRVPRMVGCEATYFFAKDTNV-------CATYKKNNVRD------------------------------------------GNLVITIRSGDIFKDSVLGYYGQPPLQMYHLAIMDKDWDRVDIVT-AYQDEEE-VNPVIPALQQRIREGVYENKIVIHTNRTLADDMQAMMCADALATARSTLSHLVAYHTIAKVIYGHNRCDGMLNEMAIARSDAKVYGF-DWKGQYSVFQNWQNTVDQREEMLSYSAMTGFVQC 1005
            CP+ +  EE     +  G      S PGN + V      R GN F ++ R+L+LGYCCKSRLV+LPPKDD LAPG F+ G  GPR FDFS APDVE F+SSSC  +I W G QAF +  L D     Y PGL+ CIK +P ++GCEA YFF  D  V        A     NVRD                                          GNLV+ +RSGDIF       YGQ     Y  AI D+ WDRVD+VT   +D+   +NP++PAL+ ++ +G     I  H NRT+ +D+ +M+CAD    ARSTL  +V++ + AK +Y    C+  L  +       +V+G   W  +Y+VF+ W NT DQ  EM++ + + GF QC
Sbjct:  146 CPYAILAEEEGHERSDRGGDGGNTSAPGNVVVVTDFNYCRLGNRFLSMGRSLSLGYCCKSRLVSLPPKDDQLAPGRFNDGTPGPRNFDFSSAPDVEGFDSSSCPPEIKWGGTQAFHLEGLRDEGHPYYTPGLFTCIKELPWIIGCEAAYFFPTDMAVPMCPLDETAEGGNKNVRDISEKPKDDAPGIQLDWEESGHGREATEQXXXXXXXXXXXGSAGNLVMHVRSGDIFVSPAHPGYGQ----YYVQAIQDQQWDRVDVVTNGIEDKNHAINPIVPALEAKVAKGQLPGNIHFHKNRTMEEDLLSMICADGFVAARSTLGRVVSHLSSAKRMYFPTSCNEELKNLGTEGPGTQVFGMASWDHEYTVFRRWNNTADQIAEMMT-ADVGGFEQC 533          
BLAST of mRNA_H-paniculata_contig693.14869.1 vs. uniprot
Match: D7G2M2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2M2_ECTSI)

HSP 1 Score: 253 bits (647), Expect = 8.650e-77
Identity = 146/337 (43.32%), Postives = 188/337 (55.79%), Query Frame = 1
Query:    4 CPFVVPEEERALAIAADGSLPGNTLTVEHLRMGRTGNHFSTVYRNLALGYCCKSRLVTLPPKDDVLAPGMFSLGEHGPRWFDFSQAPDVENFNSSSC-TDITWWGVQAFRMAYLEDPERKEYNPGLYQCIKRVPRMVGCEATYFFAKDTNVCAT------------------------YKKNNV-------RDGN-LVITIRSGDIFKDSVLGYYGQPPLQMYHLAIMDKDWDRVDIVTAYQDEEE--VNPVIPALQQRIREGVYENKIVIHTNRTLADDMQAMMCADA-LATARSTLSHLVAYHTIAKVIYGHNRCDGMLNEMAIARSDAKVYGFD 906
            CP+++      L +  D ++PGN LT+   R GR GN F  +  NL LGYCCKS+LV+LP KDD LAPG+F  G  GPRW+DF+ APDVE F++SSC  DITW G +AF +  L++P    Y+P L  C++ VPR+ GCEA YFF    +VC +                         KKN V       R  N LVI +RSGDIF D     YGQPPLQ Y  AI  + WDRVDIVT  + ++   +NPVIPAL+    EG     I  H +RT+ +D  +MMC    L TARS+LS L+A+H+ A  +Y    C G L        DA +   D
Sbjct:  124 CPYILRTPGERLRMR-DPAIPGNVLTINDFRFGRLGNRFWALGVNLKLGYCCKSKLVSLPAKDDTLAPGIFGEGTPGPRWYDFTNAPDVEGFDASSCPADITWGGREAFHLLGLDNPSHPYYSPNLSTCVETVPRLTGCEAAYFFPMGVDVCLSDRTATGDVVHEQRGNGASGRSGPGVKKNLVGSEEEEGRPANTLVIHVRSGDIFVDPAAPGYGQPPLQYYVRAIKHQKWDRVDIVTNGRTKKMNVMNPVIPALEVMFAEGELTGNIYFHKDRTMEEDFLSMMCVGGGLVTARSSLSLLLAHHSSASRLYFPRPCAGSLEFYTRGSPDASLNDLD 459          
BLAST of mRNA_H-paniculata_contig693.14869.1 vs. uniprot
Match: D7FRV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV9_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 2.100e-44
Identity = 120/374 (32.09%), Postives = 181/374 (48.40%), Query Frame = 1
Query:    1 GCPFVVPEEERALAIAADGSLPGNTLTVEHLRMGRTGNHFSTVYRNLALGYCCKSRLVTLPPKDDVLAP----GMFSLGEHGPRWFDFSQA----PDVENF--NSSSCTDITWWGVQ-AFRMAYLEDPERKEYNPGLYQCIKRVPRMVGCEATYF--FAKDTNVCATYKKNNVRD-GNLVITIRSGDIFKDSVLGY----YGQPPLQMYHLAIMDKDWDRVDIVTAYQDEEEVNPVIPALQQRIREGVYENKIVIHTNRTLADDMQAMMCADALATARSTLSHLVAYHTIAKVIYGHNRC-DGMLNEMA---------------IARSDAKVYGFDWKG---QYSVFQNWQNTVDQREEMLSYSAMTGFVQCGL 1011
            GCP  +   +   A+   G+   NT+T+     GR+GNHF  +   LA+G+CC+SRL+TLP  D  +      G F  GE   RWFDFS+     P  E    N   C      G   AF   ++        +  L +C+ RV  + GCE  Y          C   +    +  G+LV+ IRSGDIF  +  G     +GQPPLQ Y   + +KDWD V  +TA  +++ +NP    L+   + G   + + +  NR+L +D++ M+CADALAT+RS++S L   H+ A   +    C +G    M                + + DA+VYG  W G   +YSV+Q W +T +Q  EM ++  + G  +C +
Sbjct:   88 GCPQALSRSQAEAALDG-GNSTSNTITLLSFGSGRSGNHFLMISSYLAMGFCCRSRLLTLPEVDTAMPGDDEGGGFKAGE---RWFDFSRVTPPWPGFEQLGDNPEVCRPQMEDGADNAFGYEHI--------HSRLLRCMNRV-YLRGCEKAYLGKMVDLEGFCPKQEPGKRKGAGSLVVHIRSGDIFNPNEEGRRRTEFGQPPLQYYLHVLGEKDWDNVTFLTAAWNQKAINPTFSILEVMAKAGTLGDNVRLLKNRSLLEDVREMLCADALATSRSSMSFLTFAHSRATTFFVPTPCGNGGFRRMRRPPVKATFDNTTLLLLEKPDAEVYGTAWPGNSPKYSVYQAWHDTPEQLLEMATFGGIEGVQKCSV 448          
BLAST of mRNA_H-paniculata_contig693.14869.1 vs. uniprot
Match: D7FRV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV8_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 6.830e-37
Identity = 103/320 (32.19%), Postives = 152/320 (47.50%), Query Frame = 1
Query:  145 LGYCCKSRLVTLPPKDDVLAPGMFSLGEHGPRWFDFSQA----PDVENFNSSS--CTDITW-WGVQAFRMAYLEDPERKEYNPGLYQCIKRVPRMVGCEATYF--FAKDTNVCATYKKNNVRD-GNLVITIRSGDIFKDSVLGY----YGQPPLQMYHLAIMDKDWDRVDIVTAYQDEEEVNPVIPALQQRIREGVYENKIVIHTNRTLADDMQAMMCADALATARSTLSHLVAYHTIAKVIYGHNRC-DGMLNEMA---------------IARSDAKVYGFDWK---GQYSVFQNWQNTVDQREEMLSYSAMTGFVQC 1005
            +G+CC+SRL+TLP  DD L P          RWFDFS      P+ +        C   T   G +AF          ++ +P L +C+ RV  + GCE  Y        + C   +    +  G+LV  IRSGDIF     G+    +GQPPLQ Y   +  KDWD V  +TA  ++  +NP    L+     GV    + +  NRTL  DM+ M+CADALAT+RS++S L   H+ A   +    C +G    M                + + +++V+G DW+     YSV++NW ++  Q  EM +Y  + G  +C
Sbjct:    1 MGFCCRSRLLTLPATDDKL-PDELDNFTSARRWFDFSNVTVPWPEYQEMGDDQEVCRPETKDGGRKAFGY--------EDVHPKLLECMNRV-YLRGCEKAYLGKLVDVGSFCPKQEPGKRKGAGSLVAHIRSGDIFNPDGEGHRRQGFGQPPLQYYLRVLAAKDWDNVTFLTAAWEDRALNPTFLTLEMMADAGVLGENVHLFNNRTLLTDMKEMLCADALATSRSSMSFLTFAHSRATTFFVPTPCGNGGFRRMKDVPVKATFDNTTLLLLEKRESEVFGVDWRQNGSDYSVYKNWLDSPHQLLEMTTYKGIKGLQKC 310          
BLAST of mRNA_H-paniculata_contig693.14869.1 vs. uniprot
Match: D7FSJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSJ7_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 1.740e-20
Identity = 73/242 (30.17%), Postives = 114/242 (47.11%), Query Frame = 1
Query:  376 LYQCIKRVPRMVGCEATYFFAK--DTNVCATYKKN--------------------NVRDGNLVITIRSGDIFK---DSVLGYYGQPPLQMYHLAIMDKDWDRVDIVTAYQDEEEVNPVIPALQQRIREGVY-ENKIVIHT--NRTLADDMQAMMCADALATARSTLSHLVAYHTIAKVIYGHNRCDGMLNEMAIAR-----------SDAKVYGFDWK---GQYSVFQNWQNTVDQREEMLS 975
            L  C+  V +M GCEA YF         C+T +                        R  +LV   RSGD+FK   D     YGQPPL      I  K W  +  +T  + E  +NP    +++ I +G+   N  ++ T   R+L +D+QAM+CADAL+ A STL++L+  H+ AK+ +    C+  + +M I R            + +VYG +W+     Y+V+  W  +V+Q E ++S
Sbjct:  104 LQACMNNV-KMRGCEAVYFQGSFGGEEYCSTPRHRLPADEEEPGLLVAGSTSPLETKRARSLVFHFRSGDVFKPRKDFHFQTYGQPPLLYVLAVIASKKWSNLTFITNGEHERLLNPTFRVIEELISQGILGTNGTIVETYKKRSLWEDLQAMLCADALSVAHSTLTNLLLAHSRAKMFFLPWGCEPQIGDMMIPRFVSASMICLQRPEVEVYGIEWRTTSNAYTVYNKWDPSVNQLEMIVS 344          
BLAST of mRNA_H-paniculata_contig693.14869.1 vs. uniprot
Match: A0A836CFK5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFK5_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 1.480e-11
Identity = 46/153 (30.07%), Postives = 75/153 (49.02%), Query Frame = 1
Query:  553 QPPLQMYHLAIMDKDWDRVDIVTAYQDEEEVNP---VIPALQQRIREGVYENKIVIHTNRTLADDMQAMMCADALATARSTLSHLVAYHT----IAKVIYGHNRCDGMLNEMAIA---RSDAKVY--GFDWKGQYSVFQNWQNTVDQREEMLS 975
            QPPL  Y      + W+ + +VT   ++ E +P   ++PAL  R          ++ ++    +DM+ ++CA  L TARS++  L+ +H      A   +GH  C      + +    R D   Y  G +W G YS + +WQNT +QR EML+
Sbjct:    1 QPPLSWYAAVFAHRKWENITLVTEPVEQLEHHPFATLLPALLHR------PYVTMVQSSNDFKEDMRTLLCARNLVTARSSVQSLLLWHNQHLRSAYGTHGHAGCTNARTTIPLLVSQRPDVSFYVMGGEWAGNYSPYSSWQNTYEQRLEMLT 147          
BLAST of mRNA_H-paniculata_contig693.14869.1 vs. uniprot
Match: A0A835Z9K9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9K9_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 3.820e-10
Identity = 66/283 (23.32%), Postives = 113/283 (39.93%), Query Frame = 1
Query:  202 APGMFSLGEHGPRWFDFSQAPDVENFNSSSCTDITWWGVQAFRMAYLEDPERKEYNPGLYQCIKRVPRMVGCEATYFFAKDTNVCATYKKNNVRDGNLVITIRSGDIFKDSVLGYYGQPPLQMYHLAIMDKDWDRVDIVTAYQDEEEVNPVIPALQQRIREGVYENKIVIHTNRTLADDMQAMMCADALATARSTLSHLVAYH---------------TIAKVIYGHNRCDG------MLNEMAIARSDAKVY----GFDWKGQYSVFQNWQNTVDQREEMLS 975
            A G F L    P W   ++    E F+++     + +    F    + D         L +C ++ P  + CE  Y       + A  + +   D  LV+ +RSGDI+ +     YGQPPL  Y   +  + W ++ IVT    E   +P    L   +R+ V +   ++        D++ ++CA AL  + STL+ +   H               T    + G   C         ++++  AR    ++      +W   Y+ +  W+NT  QR EMLS
Sbjct:    5 ASGTFKL--RNPEW-SLNEVRHAECFSAAQTLSASGYSFDYFSRTGVAD--------WLDRC-RQEPPCLECEKFYV----GGILADPQCSETGDDELVVHLRSGDIWSEKPHKRYGQPPLSSYAAVLAHRSWKKILIVTEPTPELLRHPFAAILPAMVRQTVADTVQILD----FTSDLRTLLCARALVASHSTLTTMYLMHNQRLQSLYADALMHGTQLHNVNGQEVCSAPGAAVLSVSDLLAARPSLSIFLMPLSEEWTPTYTPYGAWKNTYAQRVEMLS 267          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig693.14869.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5K2F3_9PHAE2.450e-11542.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G610_ECTSI1.470e-10646.53Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K7B3_9PHAE1.450e-9140.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1L4_ECTSI1.330e-7739.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2M2_ECTSI8.650e-7743.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FRV9_ECTSI2.100e-4432.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRV8_ECTSI6.830e-3732.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FSJ7_ECTSI1.740e-2030.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CFK5_9STRA1.480e-1130.07Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835Z9K9_9STRA3.820e-1023.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig693contigH-paniculata_contig693:18150..31828 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons7
Model size1014
Cds size1014
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930832.9863112-CDS-H-paniculata_contig693:18149..182721622930832.9863112-CDS-H-paniculata_contig693:18149..18272Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig693 18150..18272 -
1691481472.7815757-CDS-H-paniculata_contig693:18149..182721691481472.7815757-CDS-H-paniculata_contig693:18149..18272Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig693 18150..18272 -
1622930833.0076537-CDS-H-paniculata_contig693:20423..205971622930833.0076537-CDS-H-paniculata_contig693:20423..20597Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig693 20424..20597 -
1691481472.7940817-CDS-H-paniculata_contig693:20423..205971691481472.7940817-CDS-H-paniculata_contig693:20423..20597Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig693 20424..20597 -
1622930833.0277534-CDS-H-paniculata_contig693:21005..211671622930833.0277534-CDS-H-paniculata_contig693:21005..21167Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig693 21006..21167 -
1691481472.8043008-CDS-H-paniculata_contig693:21005..211671691481472.8043008-CDS-H-paniculata_contig693:21005..21167Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig693 21006..21167 -
1622930833.0548167-CDS-H-paniculata_contig693:22454..226691622930833.0548167-CDS-H-paniculata_contig693:22454..22669Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig693 22455..22669 -
1691481472.8187919-CDS-H-paniculata_contig693:22454..226691691481472.8187919-CDS-H-paniculata_contig693:22454..22669Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig693 22455..22669 -
1622930833.0725443-CDS-H-paniculata_contig693:28492..286611622930833.0725443-CDS-H-paniculata_contig693:28492..28661Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig693 28493..28661 -
1691481472.827936-CDS-H-paniculata_contig693:28492..286611691481472.827936-CDS-H-paniculata_contig693:28492..28661Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig693 28493..28661 -
1622930833.0928013-CDS-H-paniculata_contig693:30972..310431622930833.0928013-CDS-H-paniculata_contig693:30972..31043Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig693 30973..31043 -
1691481472.83624-CDS-H-paniculata_contig693:30972..310431691481472.83624-CDS-H-paniculata_contig693:30972..31043Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig693 30973..31043 -
1622930833.1093082-CDS-H-paniculata_contig693:31728..318281622930833.1093082-CDS-H-paniculata_contig693:31728..31828Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig693 31729..31828 -
1691481472.8454015-CDS-H-paniculata_contig693:31728..318281691481472.8454015-CDS-H-paniculata_contig693:31728..31828Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig693 31729..31828 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig693.14869.1prot_H-paniculata_contig693.14869.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig693 18150..31828 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig693.14869.1

>prot_H-paniculata_contig693.14869.1 ID=prot_H-paniculata_contig693.14869.1|Name=mRNA_H-paniculata_contig693.14869.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=338bp
GCPFVVPEEERALAIAADGSLPGNTLTVEHLRMGRTGNHFSTVYRNLALG
YCCKSRLVTLPPKDDVLAPGMFSLGEHGPRWFDFSQAPDVENFNSSSCTD
ITWWGVQAFRMAYLEDPERKEYNPGLYQCIKRVPRMVGCEATYFFAKDTN
VCATYKKNNVRDGNLVITIRSGDIFKDSVLGYYGQPPLQMYHLAIMDKDW
DRVDIVTAYQDEEEVNPVIPALQQRIREGVYENKIVIHTNRTLADDMQAM
MCADALATARSTLSHLVAYHTIAKVIYGHNRCDGMLNEMAIARSDAKVYG
FDWKGQYSVFQNWQNTVDQREEMLSYSAMTGFVQCGL*
back to top

mRNA from alignment at H-paniculata_contig693:18150..31828-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig693.14869.1 ID=mRNA_H-paniculata_contig693.14869.1|Name=mRNA_H-paniculata_contig693.14869.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=13679bp|location=Sequence derived from alignment at H-paniculata_contig693:18150..31828- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGATGTCCTTTCGTGGTACCTGAAGAGGAGAGGGCGTTGGCTATAGCAGC GGATGGCTCCTTGCCGGGTAATACCTTAACTGTGGAGCACTTGAGAATGG GTAAGTCCACGAGTGTCAGAGGGGGAATGGGGGGGGGATAATATCCTTGT TGTCGAAGTACCGTACATTTGTCTGGCTCTCGTGCTGTGTCAGCTGCGCT TGTTTTGCTTTTTGTACCGGTATTGTCTACAGTCGAGCTTAGTTTCCATT TAGAATTCATTCCGCGGTCCCAGCACCTCCTACATATCTCAATAATTGAC CTTCTGCACATTGTCACGTGGCAAACTTGCCTCTCCTCCCCATCACTACC TCACTGCACACAATGTCTCGAGTAGAGAAAGAGTTGCGGTGAATATCTAC CCATCCGCCCTGAATTTCTAGACACGATGAAGACGAAAAAAGATCGACAG ATTCGCCCTGGGATTCAAAATAGTATTTTGATTTTTTTGTGTTCAAGCCG CTACAGCTTGAATGTGCGTACGTACAGGCGTTGTTTTCCGAAGAAACTAT GGGGTACGCACGGGGAGAATGCGGGGAAAAATGCATATGGGTAGAGGGGG AGAGGGCCGGGTCACACATAAAATACGGTACACCCATACGCGGTCTGGCG CAGTACGCTTCGAACAAGTGACGACCATGCTTGTATCCCATGGTGGTACT TATGACCCGCGGTGCTTCTGCATTTGCTTGGACCCTTACTTTTATGCCGT CGCTGCTGCTGATTGTTGCTGACACCTTCAAACAGGACGTACAGGGAACC ACTTCAGCACAGTATATCGAAATCTCGCGCTGGGGTACTGCTGCAAGTCC AGGCTGGTATGTGTGTGCGTTGGTCGCACGAACGACCACGGTCACGATAA GTAGATAGTGACTCATGGGAAGATCATAATTGAGTATGCTGCAAGGCCTA GAAATCAAGTGTCAAAATATCAAAGATACGCGTATCAGGATGTGACATAG TGTGAATAACCAAGCGGCCTCGCCGCCAATTCCGAAGAATGGCACTTCCG CCTGTACGGTGAGGTCACATCGGCGTCTTGCCGTCGGAAAAATGCGCAAC ACTTTTTCCTTCCGCCGTAGGTAAAAATCAAATAAGAGGGGTACCTTTCG CCGCAAGGTGGGAAAAGTAACAAATGAGCATCTTTTTCGTTCGCCCTGAG ACAAATTGTTTTTGGCATCTTTGCAGGTGAACTTTTCTTTTGCAGCACCT CTCTTCGTCGCTGTGAAGGTGGATTTGGTATATCGGGTTGTTTTTTATTT CGTTTAACGCAAACTGGGCGGTAATTTGTACTCGTTTTTCCCTATATGGC TCCGTATCTGTAGCCTGTACTGTAGCTATTGGCAAAAAAAGGCACGAAAT GTTAACAAAATCCGACGCAATTATGACCTTGTGACCGCCGATTCTGGAAT TCCACCCTGCCACGTGGTGTAGAGTTGTCTGTGTATCGGAGTCCAATTGC CCAATATTCCAAGACTTTTCACACGATCAATACAGACTGACAGAACCAAT CGTCGACCAGAAAAAAACAGAGGGAATTGAACGCGAATCGGATGTAAAAA GGAGAAATCTGACAGAACCAACCGGCGACAGGAACAATCAGGCGAAACCA ACCACGAATCGGTTATACAACTGAAGAATCTGACAGAATCGACCCCGAAC CGCTTGTACAAAAGAAAAAAGACGACGCAACCCTACCGCGAACCGGTTTT GGTTTTGGTGACGTGCAAAAATCATGTGTAAAGTTTCGTGCGGAACGGTC GCCGATCATGTGTATCATGCTACCATGTGTGCAGGATGTGCCGCTCTAGT TGAGATCGCCGCCTTCCGTGTGTAAATATAGCTCGGTCAGTTGCTATAAT AGTGAAAGGCTCTTTGAACGGCACTTATATAATACGGTAGTGAGATTACT CTACAGTCGTGGCATACATATCTTTAGAGTTCAGGTAATGTTTTCACTGG TGCATACATAAAAAGAACAACGAAAAGTTGGTATTAGGGACCCGCGCGGT TACACGTTAATCGTTGCTGTACATGTTTATTCATGTACATGTAAAGCATG CATACATATCTACCTACTATTAGTAAAAGAATACAGTGGATACCGTTGCT ATCAGCGGCCGGCGCGGCTACACGGTAGATACCGTATACAGTTTACTTGA ATACATATTTTTGTGTGATCCGCGTACGCACATGGAAAAACCCCGTGAAT TTTGAGGCAATAAGATCGCTCCGTTCATCGATGTTGATCAATAGGAAAGC TGCAGGCACCTTTTCCCTTTGGAGAATGGCGCGGTCACGCGTTAGCTACT GCACTGTACATATTCTTTACTCATACTTTATGTTTACTGTATATAATGCA AATATATTCGCATACAATTTTGCGTCTAAAAACCACATCCAACCGTTATG GTCTGCAAGGAAGCGTATAAAAAGCCGTTTCTGGTTCAGCTGTTTGCTGC TTTGGGTAGAAAGCTACCATGCATAAACTCAGCTCTGAGATTCATGAATT TCATCTTTTGTGTCTTGAGGGTTGTGTGCAGGAGGCTGCAATCAATTTCC GACCAGTGGTCTCGAATCTTCAGGATACAGCCTATTTCCAATATAACCCA GGATCTCCATCTCAAAGTTGGATCTTAATCTTACCAATATACTGTTACGA CCGATCCTACTGATGGAAATCTAACAGAACCGACCGCCGACTGGCAAAAA TGAGACGAAATCCGCTCCGGATCGTTTGCAGACATGAAAAAAACGACAGC CGACAGCCGACCGGCAAAACTCAGACATCAACGACGCCAAACCGGTTGTA GGAAAGAAAAATTGAACAGAACAGATCACTGACGGAAAAAAAACAGATGG AACCCGCCGCGACCTGGTTCCGACTCTGGTAACGTAAGACTCCTATGTAT GTGTAAATGCCGGCCTAAGGAATCCGTGAATTCAGAAAAAAAAGTGGTCT TACATCCAATGATTTCCGTTTGCCGCTCTCTCTTTGTTTGTAAATCGCCG CATTCGAGTCTGCACTGTGTCCGTGGTCTAAGGAAAAATGTACTGTCAAT TTTGAACCAGGAATCGTAAGCTAACCGGCAACTATCGTCATGTGCAATAC GTTTTTCCAATACTCAGGTCACGTTGCCCCCGAAGGACGATGTTCTGGCT CCCGGTATGTTCAGCTTGGGCGAGCACGGGCCGAGGTGGTTCGACTTTTC CCAGGCACCGGACGTGGAGAATTTCAACTCCAGCTCGTGCACGGACATTA CCTGGTGGGGGGTACAGGCTTTCCGCATGGCCTACCGTGAGTGCTCAAAA TTGTCTTCGAGGAATCTGTAATTGGACGTAGCGTGCACTTTGGGGGTTCA GTTAAGTTTGTGAATACCTTCGCCGATAAGCGAATAATATCACGATATCA CGGAACCAAGTGCAAGTTGACAGTGCATGAACGTAACATCTCACACCTTC AGCACCTTCCTTGGAACGCTCCTTCACACCCAAGATTTCAATCGCCACAC AAACCAAGATCTACCCTACTATTACATTCAATGTGCATCTTCGCAGTGCT TTCATAGAACATCCGCACGCGTATGACACTGAACACACGTTTGCGTCCAC ATTTGCTGAGAAAACGGTGCATTTAGAGAAGACATATAATGTCCTGATCA TGTAGTAAAAGAGTCGAAGCCTGGTCTGGAGGTTTTCTAAATCATAAACG TTTTTTAGCGCGCAGATATTGCCACTGAAATCCCACATAACAGGATGTCC TAGAAGCTTAGGATGGCCTTTTTTTATAGGATGAAAACAATTCAGTTATA ATTTACGCAATATATCCCACCCCCAAAACCTAATGAGATAAAAATTTTCC TCTTCTCGATAGGAATAAAATGCGTCTGCTTTCGTTAAAATTGGGATCAG GGAATCTCAAGATATAGGGCAAAATAAAAAAATCAAGGGGAACCGTGAAT GGCTACTAGATTGTTGCTTTGAACGCTCATATCTCAGGAGCAGAGAACCC AACATGAAAAACACCGGAGACAGCTGATCAACACTGGTGCCATGTACTTC CACCGACTCTGTTCGAGTCATGCTTGATTCGACACATAGTATCGTGAAAA TCGTGAAAACACGTTTCATCCTAAAGAAAAAAGCCATTCTACCCTTCTAG TACACACTGTTACGTGTTGCTTAATATCCGGCGATGTACATACTAGTAGA TTCAACCACCTTGGTCGGGTTCGTCGGAAAGCTCTGGATCACAGCTTTTT ATCCCCTGTGGCACCGGAGACCGGAAAAAGATAATAGAGACATCTGGCAG CCCCGCCGCAAGAAAGGAGAGGAAAGGGGGGGCGGATACTTTTTTACGAG GGGGAGGGGTGGCTTGCGACCTCGTATTGTACATGAAAAAATATAGGGTC AGGTCGATGATGCACGATTGTTCACCCAGTGGCCAATCAAAACTTCTCCG TCTCTCATCCATTAGACAAGTCGATCTGGGGTCACAAATTCCTACAAGAA TCCGGTGGGTTAGGGGTGTCGGGCAAACGTGCAGTGTTGGTCATTTTGCG GCCTATTTTCTCGAGGCGTCCTGTCGGTCTGGTTATGTTTCGTGGGTACC GTCATATATAACAGGGCGCCATGCATGCATCGACTATCGCTCGCTAGGGA ATTATCAGGGAGATGCTGGTGCCTACCAGCTTATTTCTCTCTCGTCACTG TGTTACCGTTACCGCAGTATCAAGGCGGAGACATGGTGTTGCAGCAATAC ATCAACTGTAACTGTGACATGCGTCTGATGTATACAGCTCCATCACTTAC CGTTTTGAGTTTTGGTTTCATTTTTCGGCACACACACACTTTCAGTGAAA TTTTCAGCCTGTACTGCACTGCTCGCAACATGAAGCACGGAAACCTTGCT TGGTTTCTTGGGAAATACCGTCGTCGTCGTCATCAAACCGACGTCCGAAG GACGACCACCGGTGTTTTCGACGGATACTTTGCTTGATAACTCCGCCTGT TGTTAATCGCATGCTCCCAAACTGTGGATACGAGAGGGCACTAGCTGTGG CATTCGAGCGCACCATCGCTGGGTAGCTGGAAACGTGTGTAACGAGAGTT ATATCGATGGTCCTTGCCACAATTACATGTCCTTGGGCTTCAGACCAGCG ACAGAACTGTGACGGGACTGTCAGCATACATATTATCTTGAAATTTGGGT CAGAAGCCAGTAAGGATCATAAGGAGACTTGTACGATCAGAGCGTGTGTC GAGCTGTGTTGGGATTGTTTGGTTAAGGCACATCTGGGGACATGTGACTT GAGTGCCGTAAAAGAGGCGTATGTATAACGAGGATTGGGGGCCATTTTAA GGCACACTGTTGCCCGTGTGCCTTAAAAGCGCCCCAAACCTGCACGCAAC CTGTAGGAAGTGAGCACGTGGTCGGAATGTGTTCTATCGGACTCGTTGAT CGTTATCAAAAGCATCAAGACCACCGAATATGGTCTTCTAACTCGTCGAA ATTTTCTTCACTGTTATTAGTAGCAGTACATATACATATTACAGTGTGTA CTAGAAGTTTAGGATGGCTTTTTTCTTCAGGAGTAGAGCAACAACACCTA GGAGCTAGTAACGATACGAAAAATACTGCAAAAACCCCATCCCCTCGGCC CAACAGCAAACGCATGGTTCCTCAACCTCTTTGCCGGCTTTAAGAAGAGA ATCCACAGAAGAGAGGGTGCATATCTGTCTGGGTAGCAGATCGCATAGAG TATGCTTAAATGAAAGCCACATTGGCCTTACAAAGCCCTGCACATGCCCC CTCAATCCCACACAGCTCAGCGTACTCCTCTAGAAGTTTCAACTCGTCGG AAATGCTGCTGTACGCGGGTGGTGCACTCCACGTTTCGCTCTCTGTACCA GCGTCCACGATCTCTACTTCATTAGATGGGTCTGGTTCGTCCTGAACACC ATCCGACACCCGGTCCATGAGCTCGTCGCGTGCGTCTTGCATCAAGGCCC CGGGGAAACCCGCATCGCCTCCAGTCGTTCTTTGTAGAGTGTCCTGATGC GAACAATACGGCCCGCGCTGGATCATGACTACCGGCCTATCTTGGCCAAT AGAATATGGCATTATATGCAAATTTTGGTATGTGTCCCTTTCAAGTCACA CTGTGCCCTTAAGTGGGAGCCAGTTCGGGACACGCGATTTTAGTGCCCTA AAAGGGGCATGTGCCTTAATAGGGTATGCCTTAAAGGGGCCACCCAATGT ACTATTGACTGCTAACCTTGAGCTTTGTAGGTCGATCAGTTGAAACGTAC AACGCGGCACAACAGATGTGCCTCTGTTTGTTTGCATGTCTATTGTTCTA TCTATCTCCACTGCATAATGCCAAACACTCAGGATACAGAGACACGCACC TTCTCCGTGTAAACTTTGAACTGCATCGGGTTGTCTGCAACATGAAGCAG GGGCGTTTTTCTTGATTCACGGGAGGGCTCGTTGTTTTCATTATAGTGGC GTCGAAAAGATGGCTGTTGCAAGCATCGGTCTACCCAATCTTAATGCTCT TCATGCCTAGAACGACTCATCCTCGGTTACTATGCATAAATGGGATATGA CTTACCACTCCTCGAACCACACTGCCACCTAGTATTTCTATGCCAGTGTA TATCAACACGAGTGTTTCAGTTTCTTTCTAGGATCTAGACACCAGCTTGA CCGAGTTCTCGATACTCATGCATACCTGGGGCTAATGTGCGAGTAGTAGT AATAATAATAATAATAATAATAGGTGTAAGTCACAGCCCACACGAGTAGG GTGAGATATATTCCACGAACCTGCAGCGAGTGAGCAGTGGGGCAAAGTTT CCTTCATGAGAGTACCCAAGTGCTGAGCTACACGCAGGTATGGTACGGTA CAAGGCAGGACAAGGTGCCTTGAGGGGTAAGATTCAAACTGACAGGCAAG GAGCGAGACATCAGCCCCGCCTAGCCAAGCGAAAAGTCATCATTCGTCAC CTAGACACGTCATGTACGGAAAGCATCTTGCATGGGGGATGACACACGTC ATGAGGGTATGAGTGTACTACGGCATGATGGAACACGTGGGTACCTAGCA ATAGTATAGGTTCATCTCTTAAGCGGCCAGTGCAAAGTCAAAATACAGAT ATTTTCTATATCATCACATTTTCCTCATGCTCGTCGCCTCCTGACGAGGG ACCCCGACCACTCTGTATTTAGCTCAAGAAGCACTTGTTTCACTAAACGG TCTCATGTCCCAGTTCTCGAACCCCGCCTCAACACCGTGTTTCTTTTTCA TCGCCTTGTTTTTCTCTGAACTGTACCAGTGGGCACCAACCTTTTTGCCC CATATTTTCAAGTTTAATTTTTTCTCTAGAATCGAGTGGGCCCGTAATTT TTTTCTCAAAGTCATGCCCCTTACCGATCAAGTTTTGCTGGTGAGTGTTT ACACAGCTGCAGATTAAAGTCAGCTGCACAACCTCAACGTTGATACAAAG GAGTTACAATATGAGGCTCAAGTGAAAGTTCAACTGGTTGTGGCGCGGTA ATTTTACTACAATAATGAGAATTTCAGTTACCAAAATGGAGGGTTGTTTT CAATTTTCATGGTGCCAAACGTTTTTCTGAGGACTGCTTCATATTTTACC TACGGTATACAGAAGGTTAACGGCGACCATCTTGAAAAATGTGGCGAACC TCGACGTGAATATTTTATTTTTTATATGTATTCTTTGTAACGTGACCGCA TCGACCGTGTCGTTTGTTAAAGCCATAGTTTGCGGGAAACGGCTCCAAAT TGGGCGCGCTACGGTCGATTTTCCAGCATTTTTCTTGTTATTCTCGGGTA AAGGATAGCGGTTAATTTTTTCCCTTTTTTTCGTGACCCAATTTTTCACG CAAGTTGTATGCACCATTACTTATTATATTGTAATTAGTTTTGGTGTAAG TGTGGCCGAGGTACCGATAATAAGGAGCCTCCGTAAAAATATGTACTCCA AGTATATATCAAGGGTCATGTGGTGGCCACCTGAGGAAAACACCGTAAAA GGGGTAATAATCACCGAACGTTTGTCAAGGGCAGCTACCTTCATCTTCTC ATTGGCGACACCGATAGATATAATGTCTGCTTTTGGTCTTGTCGAACCGC CCAACACCATAGTCGCAACTACGGTGGGGGAACAAAAGCAGCAAGTTCAG CACCCGTGTGAAGAAAAGATGTTGTAACACCTCGCCCCCAGCCGATCATG TCCCGGTTACCTCTAAACTGATGCCTTCCAAAGCAAGATGCGAGGAAATG GAGAGGTAATGTGGTGGCCACCTGAGGTCAACACCCAACGTCTATCCAGG TCAAATACCCTTATATTTACAGTCGTCTCTTTTTTTAGGCAGTAAAGTCG TCTGTGATGCATTCTTCGAGAAACGTCTATAGCATTTTGCTGGTGTGTGT ATGAGTCTAACATTTTCCCAGCACATCTTTTTAAAAGATCACAGATTCGT TGAAGCGGCACTTTAGTACTGACTTCTTTTTACAGCTCAAGTGATGAGTA CATACAATATCTAGATACACTGCTCTGAATTTTTCCGTGTCGGGTCTGCA CTATGTGAATTGAGAAATAGTATCATGCACCACAAATGAGTGTGTCTAGA TGCCTTCTTCGGTTCTTATTTAAAGTAAGCCACATCGCTCAACATCTGAA CTTTGTTTCGGTCAAGTCGACGACTACTAGTAATACGTTTCCCGGCCGAT GCAGCCTTTTTTCTAACATCTCACCCCGTCTTGTTCCCTCTACAAGGATT TCTATCGATTATCTGTTATTTTCAGCCTCAATACCGTGGCAATATCCTCA CTACTGAGAGCAGGGCCGGGCTTGTCATACTATAAATTGATCCATTGATT AGTTGACTAAATATCTGTTCTACGCGTTTGCCCCTCTTCACAAGTCCATT GCAACACTGTACGTGGTGAGAGATCCGTTGAGACGAAGAGGACTGTCATC ATGAACTTTACGCTATGTTCAAAGTATGACCCATATAAACCCATTTATTG ATGATCCAACCTATTCTTAAAGCTTGTTTTTGTCTTCACCCCAACGTTCC TTTTTGAAGTGGAAGATCCAGAGCGAAAGGAGTACAATCCTGGGCTCTAT CAGTGCATCAAGAGGGTGCCTCGCATGGTAGGCTGCGAGGCGACGTACTT TTTCGCCAAGGACACAAACGTCTGCGCTACTTACAAGAAGAACAACGTCC GTGATGGCAACCTTGTAATCACTATTCGATCGGGAGACATCTTCAAGGAC TCCGTTCTTGGGTACTATGGACAGGTATGTGTAGTGAATACCGATAGGCA ACCTTATGGGTGGAAGAGTTTATCCCCCTACAAGGAATACTTGACGTATT CGCCACGAAAATTAACAATCTATGCGCCTGAGTTTCAGAATGAGCTGACA CATGAATAAAAGACCCACCCTTGTCCATTTAATTTACGAGTGTTATTAGC AGTCGTCGATGGTCCGGAGCACATAAAACACACGAGCTCATTCTGAAACT CAGGCCAATACTTGTTTTTTTGGTGGCGAACACGCCAAATATTCGTATTT GGCCAGGGGGTGTAACCCTTCCACCTCCGGGAAAATTACGAGTACTTGGC GTGATCGCCACAAAAATGAAAAATTAAATAATCTGAGTTGCAGACTGCGC GGACACATAGAATAAAGAACCCACTCCTGACCATTCGATTTACGAGCGTT TTTAACAATCGTGGATGGTCCAGGGCACATGGAATACACGAGCTCATTCT GAAACGCAGACAAATACTTGAAAAAAATTGTGGCGAATACGCTACTTACT CGCATTTGTCTGGAGGGTGGAGAGTTAACAATACCGCAGAGTTAGCTTGA GATACTGTGCGCATCAGACGTCAAGCTATGAAGCATTTCTTTTTTGCCCT GTACTTAACAAGTATCGACAAGGTTCATAACTTTAATCTTTCCTCTTAGC GCGCAGCCCCTGCCCGTTTTGGTGCTAGGGCAATAACCACGATGCTTTTG ATGTGTTGATAGTATTCTACTCATACGCGCGCAGCTCCATTATAGTCAAG TTGCCTTGATCAGATGCCCCCAAAAGTACTGCTTCAGCATCCCCAGCAAC CACAAACTGACTCTATGCTAAGGACCTTTAACAGACTGCTGATGATGCAG AATGTTCCCAGTATGTATGGCGCGGACCGAATCTTGAGTATAAGTCTAAC GCATCCGTCTGATACTTCATACCCGCGGCCTTCAACCCCGGACTGTGGAA GTGATGGGGGTACAGTACGTACGTCCTATGTATTGGACAATTGCACATAA CGTCTGCAGAGTGAAGTTGGTCGTGAGCATGGAATATCTGGAAACGGCGG GTACTGATTAGCCCCCTCGCCCGTCTTGGGGGCTAAAAGTGGTTTAGGGC TGTATGCTTCGGGAAGAGTGTTCCGCATTCCCTTGTGTACGTGTTTTTCT TGTTTAATCTTAACAGGATCCTTCCCTCCTCTGTTCTTCAAAACACTGCA TCCCTTTTGGTGCGCTTCGTCCGCCTTCGTGCCATCAACAACAATGACAA TGCACCTGCAGCCGCCATTGCAGATGTATCACCTCGCAATTATGGACAAG GACTGGGATCGCGTAGACATCGTGACTGCTTACCAAGACGAAGAAGAGGT CAACCCCGTGATACCAGCTCTGCAGCAACGGATTCGGGAAGGAGTTTACG AGAATAAAATAGTCATTCACACGGTGAGAGCGAACCAACCAGCTAACCAA TCAAACAAGCACATAAAAGCGAGCAAGGAGCACCACTCGTCGTTGTAATT TTGATGTAATTATTGAGCAGAGATTAACACTGGATGGCGATAATCAAGTT TCTTCAGAGTGATATTCTGAGATAATCAAATGTTTTCAAAGCAGTTGGTT TGTTACTTTTGTTCACTTAGAGATATTGGTTGAGCACAATACATACGTTG GATTAACTTGTATAACTTGGTGATATGTCCTTCGAAGATTTCAATTCTTG CGAAAAACATTATTTTCCAAGGCGAATGTTTATTTTGCGAATTGCTACTG AAGAGCTTTCAATCTCAACGCAAAAGCGACACTAAGCTTGTTAAAGTCGC TTGCCTTTCTTGCTTTTGTTTCATCACTTAGAACCGAACACTGGCGGACG ACATGCAAGCCATGATGTGCGCGGACGCGTTGGCTACGGCTCGATCTACG CTGAGTCATCTTGTCGCCTACCACACCATAGCCAAGGTTATATATGGCCA TAACCGTTGCGATGGAATGCTCAATGAGATGGCGATAGCCCGGAGTGATG CCAAGGTAAGCACAATCGATTTCGATATATATATCTTCCCTCAGACACAG TGCAGACATGGGTATGGTGATTCGGAAACAAGAAAGTAAAAAAATGGTAA TTTGAAGAGACCCAATGTACGACCAATTGCATAGTAACAGTATCTGGTGG TAGCCGAAAGTCTTCCCCAAAACAAACGACATCTTGTCCACCGTGCTGAG CTTCCAAACGTAGTAACTTCATGTGATCGTATATGTATATATGCATCGAT TTGAATTAAAACGAATCTTTATAAAATTATAGCCATCCTCGATCGCTTTT TTGCTTCTCCACGGATTTTGACCTGCAAATAAGATTATCAAAAGAGGATT CAGCCAAAACACCTAAAACCTCCTGGAGCAATGAGTGGAGCGGGGCGGGA AACAACGAACACGCTGCCTTCATTTTTCAACCAGGACAAAGCCCGACAAC GTTAGCAACCGAATTGGTCGAGTGCTGTGGTAAAAAAATCTAATTAATAC ATTCCGGTATTCCCGGAGTGCACGTGGTCGAAACGTCAAAACAAAAACGT GTAATACTGAAATTTTAGTGCCTTACAACTCAAGACACTCTTGGTCTTTT CGGCACACAAAAATATTGTTTTTGCTGTGTTACGTACGTGAGTAGCCTAA CTAGCCTATTTTCTACACGAATTGCGCGCGCTCGATAGCAGCCATTAACG TTTTGAATCGGGCATATTTTTAATCTTGAGCGCGAAAAAATTCCCATATA TATATATATATTCGCACGGCAAAACACGATGAGCTTAAAAAAATCGTCGA GCGCTATTGAATCAAAGACTTCTTGTGTAGAACTGATTTTCGGACTCCAC TGTCCCCCTTCGGAAGGGAACTTTTTCAGAAATGTGGTTCCAACATTCGG AAAAACTCAAACAACTTGTTACTCGTAGGCGTCAAGTTTATAAATTCGTA GAGTTATATCAGTGAACATTTATTATTGAACATCACTTCACCTTTACACT GGTGACGATTACTAGTTTATTCAGACAGACGGTGGCCTAACACAGCACCT TTTGTTTTTCTCGAAACATTTGCCTTTTCCCGTCGTTCAGTAGCTCAGCC ATATAAACTCCCACCAGACACTCGGCAGGTAGAAGCTTGAGGGTCACGCT AGCGGTCGTTGAAGAATCACATGTGTGTTCGCGGTGTGGCCCACCTTGTC CTCTCCCGCCCGCGAACCCCCCCGCCTCCCCCGAAAAAAACAGTTTGTTT CAACGAGTAAGGTTTGTGTGTAATGAATTCATTTCAAGGGTACCTTTGAT TGAATGCATATAATTCCGACGAAATTGGTAGATTGATCAACTGGCTGTCA AATTAGGTAGTATCCTTTCTTTAATTGGCCTAACTGATAAAATTGGTCAG GAGTAATTCCAATATACCAGTAACTCTCTACAGTATGTGTGTCATACTCC GAAGCGTTCCCGTTATAAATATCAGATTGTAAGAATTGCTCGAACGACAG TAAGCCATCAGCACGCATGTAACACGCACACGAATACACACACAGAGAAG CGTGCGCGTAGATGTCGGTACCGCCGTGCACAACACCACGTCATGACTAT GCTGCCATGTTTTATGAAGCTTTCGTCTTTTTGGGGTTAACCGTGCAATG GACGCGCTGTTGCTGACGGGCTAAAATTCAACACAATTTTGAAGGGATGT ACACCAAATCACAAATTTCTCCTGCCTCCGCCGTCGCTTCCAGCGGGGAC CCCTTACCAGAAGGTGGGGGCGTGGGCAAGGCTCCGCCACGTTACCTTAG CAGGCAACGCCGGGAGAGTCGTCAGTTAAAAAGGGGGGGCCTGAATCTGG AACTGGCTGAAATTACCGTTATCTGGTTAACGGCTACGACCAACCAGGCC ATCACCCTGAAACAGGACTATTACTAAATGCTGTATCGATATATTGGGAA TGTAATTTCGCCCTTCAGACAAATAGGCTCCCAATAGTTAAAATTGACTG TCGAATGCACTCTGGAATACACAATCACCCCCGGAAATGGATTAAAATCT CCAGAAGAAGTACACCGACAAATTCAAGCGACACAGCTTGTGCAAAAACG TTCAACGTACGTACAAACACGTCCCTTCTCGCAACTGGAAAACCTAATGT ACACAGGTATACGGCTTCGACTGGAAAGGACAGTATTCTGTGTTCCAAAA CTGGCAGAACACCGTGGATCAGCGAGAGGAAATGCTAAGCTACTCCGCCA TGACGGGATTTGTTCAATGTGGATTGTAG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig693:18150..31828-

>mRNA_H-paniculata_contig693.14869.1 ID=mRNA_H-paniculata_contig693.14869.1|Name=mRNA_H-paniculata_contig693.14869.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2028bp|location=Sequence derived from alignment at H-paniculata_contig693:18150..31828- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGATGTCCTTTCGTGGTACCTGAAGAGGAGAGGGCGTTGGCTATAGCAGC
GGATGGCTCCTTGCCGGGTAATACCTTAACTGTGGAGCACTTGAGAATGG
GGATGTCCTTTCGTGGTACCTGAAGAGGAGAGGGCGTTGGCTATAGCAGC
GGATGGCTCCTTGCCGGGTAATACCTTAACTGTGGAGCACTTGAGAATGG
GACGTACAGGGAACCACTTCAGCACAGTATATCGAAATCTCGCGCTGGGG
TACTGCTGCAAGTCCAGGCTGGACGTACAGGGAACCACTTCAGCACAGTA
TATCGAAATCTCGCGCTGGGGTACTGCTGCAAGTCCAGGCTGGTCACGTT
GCCCCCGAAGGACGATGTTCTGGCTCCCGGTATGTTCAGCTTGGGCGAGC
ACGGGCCGAGGTGGTTCGACTTTTCCCAGGCACCGGACGTGGAGAATTTC
AACTCCAGCTCGTGCACGGACATTACCTGGTGGGGGGTACAGGCTTTCCG
CATGGCCTACCGTCACGTTGCCCCCGAAGGACGATGTTCTGGCTCCCGGT
ATGTTCAGCTTGGGCGAGCACGGGCCGAGGTGGTTCGACTTTTCCCAGGC
ACCGGACGTGGAGAATTTCAACTCCAGCTCGTGCACGGACATTACCTGGT
GGGGGGTACAGGCTTTCCGCATGGCCTACCTGGAAGATCCAGAGCGAAAG
GAGTACAATCCTGGGCTCTATCAGTGCATCAAGAGGGTGCCTCGCATGGT
AGGCTGCGAGGCGACGTACTTTTTCGCCAAGGACACAAACGTCTGCGCTA
CTTACAAGAAGAACAACGTCCGTGATGGCAACCTTGTAATCACTATTCGA
TCGGGAGACATCTTCAAGGACTCCGTTCTTGGGTACTATGGACAGTGGAA
GATCCAGAGCGAAAGGAGTACAATCCTGGGCTCTATCAGTGCATCAAGAG
GGTGCCTCGCATGGTAGGCTGCGAGGCGACGTACTTTTTCGCCAAGGACA
CAAACGTCTGCGCTACTTACAAGAAGAACAACGTCCGTGATGGCAACCTT
GTAATCACTATTCGATCGGGAGACATCTTCAAGGACTCCGTTCTTGGGTA
CTATGGACAGCCGCCATTGCAGATGTATCACCTCGCAATTATGGACAAGG
ACTGGGATCGCGTAGACATCGTGACTGCTTACCAAGACGAAGAAGAGGTC
AACCCCGTGATACCAGCTCTGCAGCAACGGATTCGGGAAGGAGTTTACGA
GAATAAAATAGTCATTCACACGCCGCCATTGCAGATGTATCACCTCGCAA
TTATGGACAAGGACTGGGATCGCGTAGACATCGTGACTGCTTACCAAGAC
GAAGAAGAGGTCAACCCCGTGATACCAGCTCTGCAGCAACGGATTCGGGA
AGGAGTTTACGAGAATAAAATAGTCATTCACACGAACCGAACACTGGCGG
ACGACATGCAAGCCATGATGTGCGCGGACGCGTTGGCTACGGCTCGATCT
ACGCTGAGTCATCTTGTCGCCTACCACACCATAGCCAAGGTTATATATGG
CCATAACCGTTGCGATGGAATGCTCAATGAGATGGCGATAGCCCGGAGTG
ATGCCAAGAACCGAACACTGGCGGACGACATGCAAGCCATGATGTGCGCG
GACGCGTTGGCTACGGCTCGATCTACGCTGAGTCATCTTGTCGCCTACCA
CACCATAGCCAAGGTTATATATGGCCATAACCGTTGCGATGGAATGCTCA
ATGAGATGGCGATAGCCCGGAGTGATGCCAAGGTATACGGCTTCGACTGG
AAAGGACAGTATTCTGTGTTCCAAAACTGGCAGAACACCGTGGATCAGCG
AGAGGAAATGCTAAGCTACTCCGCCATGACGGGATTTGTTCAATGTGGAT
TGTAGGTATACGGCTTCGACTGGAAAGGACAGTATTCTGTGTTCCAAAAC
TGGCAGAACACCGTGGATCAGCGAGAGGAAATGCTAAGCTACTCCGCCAT
GACGGGATTTGTTCAATGTGGATTGTAG
back to top