mRNA_H-paniculata_contig693.14868.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig693.14868.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 152 bits (383), Expect = 8.480e-42 Identity = 73/137 (53.28%), Postives = 94/137 (68.61%), Query Frame = 3
Query: 6 YDAVGFTGAVGSTDVIHIA*GCTPASHTHLYTGKEGFPTLAYEATVDHSGRVLGMTKGMAGAVNDKSTVRFDKKVQAVREGEPYRSMTYKLRDKDGVEQVEKGIYLIVDGGYHRWRSLVCPAKEAATREELAWSKRL 416
YD +GF GAVGSTDV HI G P + +YTGKEG PT+A++ TVDHSGRVL +T+G GA NDK+ +R+DK V +R Y YKL +DG + EKG YL+VD GYH+WR+L+ P+K R +L +SKRL
Sbjct: 146 YDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRL 282
BLAST of mRNA_H-paniculata_contig693.14868.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 152 bits (383), Expect = 4.040e-41 Identity = 73/137 (53.28%), Postives = 94/137 (68.61%), Query Frame = 3
Query: 6 YDAVGFTGAVGSTDVIHIA*GCTPASHTHLYTGKEGFPTLAYEATVDHSGRVLGMTKGMAGAVNDKSTVRFDKKVQAVREGEPYRSMTYKLRDKDGVEQVEKGIYLIVDGGYHRWRSLVCPAKEAATREELAWSKRL 416
YD +GF GAVGSTDV HI G P + +YTGKEG PT+A++ TVDHSGRVL +T+G GA NDK+ +R+DK V +R Y YKL +DG + EKG YL+VD GYH+WR+L+ P+K R +L +SKRL
Sbjct: 237 YDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRL 373
BLAST of mRNA_H-paniculata_contig693.14868.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 137 bits (346), Expect = 2.230e-37 Identity = 63/137 (45.99%), Postives = 91/137 (66.42%), Query Frame = 3
Query: 6 YDAVGFTGAVGSTDVIHIA*GCTPASHTHLYTGKEGFPTLAYEATVDHSGRVLGMTKGMAGAVNDKSTVRFDKKVQAVREGEPYRSMTYKLRDKDGVEQVEKGIYLIVDGGYHRWRSLVCPAKEAATREELAWSKRL 416
YD +GFTGA+GS DV HIA P + YTGKEGFPT+ Y+ TVDH+GR + +T+G G+ NDK+TV +D V+ +R + Y T+ + ++DG KG Y++VD GYH+W+ L+ P+K + +L +SKRL
Sbjct: 23 YDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRL 159
BLAST of mRNA_H-paniculata_contig693.14868.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 139 bits (349), Expect = 2.740e-36 Identity = 66/137 (48.18%), Postives = 89/137 (64.96%), Query Frame = 3
Query: 6 YDAVGFTGAVGSTDVIHIA*GCTPASHTHLYTGKEGFPTLAYEATVDHSGRVLGMTKGMAGAVNDKSTVRFDKKVQAVREGEPYRSMTYKLRDKDGVEQVEKGIYLIVDGGYHRWRSLVCPAKEAATREELAWSKRL 416
YD +GF+GA GSTDV HI G P + YTGKEG+PT+AY+ TVDH+ RVL +T G G+ NDKS +R+D V +RE Y + + + DG KG YL+VD GYH+W +L+ P+K + +LA+SKRL
Sbjct: 221 YDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRL 357
BLAST of mRNA_H-paniculata_contig693.14868.1 vs. uniprot
Match: A0A6H5JG32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG32_9PHAE) HSP 1 Score: 130 bits (326), Expect = 3.220e-36 Identity = 63/121 (52.07%), Postives = 77/121 (63.64%), Query Frame = 3
Query: 6 YDAVGFTGAVGSTDVIHIA*GCTPASHTHLYTGKEGFPTLAYEATVDHSGRVLGMTKGMAGAVNDKSTVRFDKKVQAVREGEPYRSMTYKLRDKDGVEQVEKGIYLIVDGGYHRWRSLVCP 368
YD +G TGA+GSTDV HI G P + YTGKEGFPT+AY+ TVDH+GR + +T G GA NDK+ +R+D V ++ Y TYKLR DG + KG YLIVD GYH SL P
Sbjct: 4 YDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHVIKADFQYTKRTYKLRRADGTFRERKGCYLIVDNGYHEVNSLGHP 124
BLAST of mRNA_H-paniculata_contig693.14868.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 132 bits (333), Expect = 9.680e-35 Identity = 62/137 (45.26%), Postives = 86/137 (62.77%), Query Frame = 3
Query: 6 YDAVGFTGAVGSTDVIHIA*GCTPASHTHLYTGKEGFPTLAYEATVDHSGRVLGMTKGMAGAVNDKSTVRFDKKVQAVREGEPYRSMTYKLRDKDGVEQVEKGIYLIVDGGYHRWRSLVCPAKEAATREELAWSKRL 416
+ +G+TGA GSTDV HI P + +TGKEGFPT+AY+ TVDH GR L +T G GA NDK+ +R+D V +R Y YKLR +G +++ +G +LIVD GYH W +L+ P+K E+ A+S+ L
Sbjct: 99 FHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDL 235
BLAST of mRNA_H-paniculata_contig693.14868.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 130 bits (327), Expect = 2.870e-33 Identity = 62/137 (45.26%), Postives = 87/137 (63.50%), Query Frame = 3
Query: 6 YDAVGFTGAVGSTDVIHIA*GCTPASHTHLYTGKEGFPTLAYEATVDHSGRVLGMTKGMAGAVNDKSTVRFDKKVQAVREGEPYRSMTYKLRDKDGVEQVEKGIYLIVDGGYHRWRSLVCPAKEAATREELAWSKRL 416
Y+ +GF GA+GSTDV HI P + YTGKEG PT+ Y+ TV+H+GRVL +T+G G+ NDK+ + D+ V +R + Y + + KDG + KG YLIVD GYH+WR L+ P+K + +L +SKRL
Sbjct: 192 YEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRL 328
BLAST of mRNA_H-paniculata_contig693.14868.1 vs. uniprot
Match: A0A6H5JCU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCU6_9PHAE) HSP 1 Score: 129 bits (323), Expect = 1.030e-32 Identity = 62/121 (51.24%), Postives = 76/121 (62.81%), Query Frame = 3
Query: 6 YDAVGFTGAVGSTDVIHIA*GCTPASHTHLYTGKEGFPTLAYEATVDHSGRVLGMTKGMAGAVNDKSTVRFDKKVQAVREGEPYRSMTYKLRDKDGVEQVEKGIYLIVDGGYHRWRSLVCP 368
YD +G TGA+GSTDV HI G P + YTGKEGFPT+AY+ TVDH+GR + +T G GA NDK+ +R+D V ++ Y TYKLR DG + KG Y IVD GYH SL P
Sbjct: 313 YDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTKRTYKLRRADGTFRERKGCYYIVDNGYHEVNSLGHP 433
BLAST of mRNA_H-paniculata_contig693.14868.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE) HSP 1 Score: 127 bits (319), Expect = 2.740e-32 Identity = 67/136 (49.26%), Postives = 84/136 (61.76%), Query Frame = 3
Query: 6 YDAVGFTGAVGSTDVIHIA*GCTPASHTHLYTGKEGFPTLAYEATVDHSGRVLGMTKGMAGAVNDKSTVRFDKKVQAVREGEPYRSMTYKLRDKDGVEQVEKGIYLIVDGGYHRWRSLVCPAKEAATREELAWSKR 413
Y +G GAV S D HI+ P S T+ + GKEG+ TL YEA+ DHSGR+L TKG GA NDK+ V+ D V +RE EP+ S + L D +G G +LIVDGGYHR SL+CP KE A+ + WSKR
Sbjct: 175 YGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLICPFKEYASEAQQEWSKR 310
BLAST of mRNA_H-paniculata_contig693.14868.1 vs. uniprot
Match: A0A6H5J792_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J792_9PHAE) HSP 1 Score: 119 bits (298), Expect = 4.490e-32 Identity = 58/114 (50.88%), Postives = 74/114 (64.91%), Query Frame = 3
Query: 6 YDAVGFTGAVGSTDVIHIA*GCTPASHTHLYTGKEGFPTLAYEATVDHSGRVLGMTKGMAGAVNDKSTVRFDKKVQAVREGEPYRSMTYKLRDKDGVEQVEKGIYLIVDGGYHR 347
YD +GFTGA+GSTDV HI P S YTGKEG P++AY+A VDH+GR+L +TKG AGA+NDK+ + +D V +R Y Y L DK+G KG Y IVD GY++
Sbjct: 4 YDLLGFTGAIGSTDVTHIRWAFCPYSWARQYTGKEGLPSIAYQAIVDHTGRILAVTKGFAGAMNDKTIIWYDTAVAKIRRDPVYTEKVYTLSDKNGQPFERKGNYSIVDNGYNK 117 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig693.14868.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig693.14868.1 >prot_H-paniculata_contig693.14868.1 ID=prot_H-paniculata_contig693.14868.1|Name=mRNA_H-paniculata_contig693.14868.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=83bp MTKGMAGAVNDKSTVRFDKKVQAVREGEPYRSMTYKLRDKDGVEQVEKGIback to top mRNA from alignment at H-paniculata_contig693:1669..2696+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig693.14868.1 ID=mRNA_H-paniculata_contig693.14868.1|Name=mRNA_H-paniculata_contig693.14868.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1028bp|location=Sequence derived from alignment at H-paniculata_contig693:1669..2696+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig693:1669..2696+ >mRNA_H-paniculata_contig693.14868.1 ID=mRNA_H-paniculata_contig693.14868.1|Name=mRNA_H-paniculata_contig693.14868.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=498bp|location=Sequence derived from alignment at H-paniculata_contig693:1669..2696+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |