mRNA_H-paniculata_contig6903.14831.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig6903.14831.1
Unique Name	mRNA_H-paniculata_contig6903.14831.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig6903.14831.1 vs. uniprot
Match: D8LHM3_ECTSI (Myosin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHM3_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 3.700e-75
Identity = 136/174 (78.16%), Postives = 145/174 (83.33%), Query Frame = 1

Query:    1 RWLDLYGDERRRQYAGMLRRDRARLPPHV----AVAFAGLSKDRQNQSILVSGESGAGKTETVKILMGHLSVASSTGGGEGTEAAVPEPGRRREGERDNEGVIKKIIESNPLLESFGNAQTTRNDNSSRFGKFTQLQFDGEFRMSGSGCTTYLLEKSRVVGHEPGERAYHVFYQ 510
            RWLDLYG+ERR+QYAGM+R +R+RLPPHV    AVAFAGLSKDR+NQSILVSGESGAGKTETVKILMGHL+VASS   G+  E                  VI+KIIESNPLLESFGNAQTTRNDNSSRFGKFTQLQFDG FRMSGSGCTTYLLEKSRVVGHEPGERAYHVFYQ
Sbjct:  129 RWLDLYGEERRKQYAGMVRGERSRLPPHVYSTSAVAFAGLSKDRENQSILVSGESGAGKTETVKILMGHLAVASSAVYGD--EGXXXXXXXXXXXXXXXXXVIRKIIESNPLLESFGNAQTTRNDNSSRFGKFTQLQFDGGFRMSGSGCTTYLLEKSRVVGHEPGERAYHVFYQ 300

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BLAST of mRNA_H-paniculata_contig6903.14831.1 vs. uniprot
Match: A0A7S1ADB9_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1ADB9_NOCSC)

HSP 1 Score: 171 bits (432), Expect = 5.020e-46
Identity = 93/171 (54.39%), Postives = 119/171 (69.59%), Query Frame = 1

Query:   10 DLYGDERRRQYAGMLRRDRARLPPHV----AVAFAGLSKDRQNQSILVSGESGAGKTETVKILMGHLSVASSTGGGEGTEAAVPEPGRRREGERDNEGVIKKIIESNPLLESFGNAQTTRNDNSSRFGKFTQLQFDGEFRMSGSGCTTYLLEKSRVVGHEPGERAYHVFYQ 510
            DLY +E R++Y      DRA+LPPHV    + A++GL + R++Q+ILVSGESGAGKTETVKILMGHL++ +S+                     ++   IK+I++SNPLLESFGNAQT RNDNSSRFGKF +L+ +   R+ GS C TYLLEKSRVVG + GER YH+FYQ
Sbjct:  113 DLYTEEVRKEYLVF---DRAKLPPHVYATSSAAYSGLQETREDQAILVSGESGAGKTETVKILMGHLALIASS---------------------EDSLHIKRIVDSNPLLESFGNAQTVRNDNSSRFGKFIELELNSSCRLVGSSCRTYLLEKSRVVGQDAGERNYHIFYQ 259

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BLAST of mRNA_H-paniculata_contig6903.14831.1 vs. uniprot
Match: A0A7S4WAU7_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4WAU7_9DINO)

HSP 1 Score: 170 bits (431), Expect = 6.860e-46
Identity = 95/175 (54.29%), Postives = 121/175 (69.14%), Query Frame = 1

Query:    1 RWL-DLYGDERRRQYAGMLRRDRARLPPHV----AVAFAGLSKDRQNQSILVSGESGAGKTETVKILMGHLSVASSTGGGEGTEAAVPEPGRRREGERDNEGVIKKIIESNPLLESFGNAQTTRNDNSSRFGKFTQLQFDGEFRMSGSGCTTYLLEKSRVVGHEPGERAYHVFYQ 510
            RW  DLY DE+R+QY   L  D ++LPPHV    + A+AGL++ +++Q++LVSGESGAGKTETVKILM HL++ +S+                     D+   I++I+ESNPLLESFGNAQT RNDNSSRFGKF +LQ +   R+ GS C TYLLEKSRVV  + GER YH+FYQ
Sbjct:  118 RWFADLYTDEQRKQY---LVYDCSKLPPHVYATSSAAYAGLTETKRDQAVLVSGESGAGKTETVKILMAHLALIASS---------------------DDSTHIRRIVESNPLLESFGNAQTVRNDNSSRFGKFIELQLNSSCRLVGSQCRTYLLEKSRVVSQDAGERNYHIFYQ 268

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BLAST of mRNA_H-paniculata_contig6903.14831.1 vs. uniprot
Match: A0A7S2KNJ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KNJ8_9STRA)

HSP 1 Score: 166 bits (421), Expect = 1.580e-45
Identity = 98/195 (50.26%), Postives = 124/195 (63.59%), Query Frame = 1

Query:    1 RWL-DLYGDERRRQYAGMLRRD------RARLPPHV----AVAFAGLSKDRQNQSILVSGESGAGKTETVKILMGHLSVASSTGGGEGTEAAVPEPGRRREGERDNEGVIKKIIESNPLLESFGNAQTTRNDNSSRFGKFTQLQFDGE------FR--------MSGSGCTTYLLEKSRVVGHEPGERAYHVFYQ 510
            +WL D+Y +E R +YA  L  D        RLPPHV    + AF GL+ D  +QSILVSGESGAGKTETVKI+M HL+   S+G   G+                  G++K++++SNPLLE+FGNA+T RNDNSSRFGK+ QL+FD E      F+        ++GS C TYLLEKSR+VGHEP ER YH+FYQ
Sbjct:   48 KWLKDIYSEENRERYANALVWDVKPGVTPPRLPPHVYATSSSAFRGLAVDGVDQSILVSGESGAGKTETVKIVMSHLAAIQSSGSDGGSS-----------------GIVKRVLDSNPLLEAFGNAKTVRNDNSSRFGKYIQLEFDVEDATSASFKGRAVPTCTLAGSRCETYLLEKSRIVGHEPEERGYHIFYQ 225

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BLAST of mRNA_H-paniculata_contig6903.14831.1 vs. uniprot
Match: A0A835YXJ7_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXJ7_9STRA)

HSP 1 Score: 168 bits (425), Expect = 4.310e-45
Identity = 106/198 (53.54%), Postives = 122/198 (61.62%), Query Frame = 1

Query:    1 RWLDLYGDERRRQYAGMLRRDRARLPPHV----AVAFAGLSKDRQNQSILVSGESGAGKTETVKILMGHLSV-----ASSTGGGEGTEAA----VPEPGRRREGERDNEGVIK---------------KIIESNPLLESFGNAQTTRNDNSSRFGKFTQLQFDGEFRMSGSGCTTYLLEKSRVVGHEPGERAYHVFYQ 510
            RWLDLY DE   +YA M   +R +L PHV    A+A+ GLS+  + QSILVSGESGAGKTETVKILM HL+      A+   G  G +AA    V   G   +G + ++  IK               KIIESNPLLESFGNA+T RNDNSSRFGKFTQLQ           C TYLLEKSRVVGH  GER YH+FYQ
Sbjct:   40 RWLDLYSDELGARYARMKAGERNQLTPHVFSTSAIAYDGLSRLGRGQSILVSGESGAGKTETVKILMSHLATVARSRAARINGESGADAAAGGMVVAEGAEGDGMQSDDFTIKQGVKRLETAKVIWWTKIIESNPLLESFGNAKTVRNDNSSRFGKFTQLQ-----------CVTYLLEKSRVVGHSEGERGYHIFYQ 226

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BLAST of mRNA_H-paniculata_contig6903.14831.1 vs. uniprot
Match: A0A812ZCM6_9DINO (Myo5a protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A812ZCM6_9DINO)

HSP 1 Score: 167 bits (423), Expect = 8.130e-45
Identity = 93/175 (53.14%), Postives = 117/175 (66.86%), Query Frame = 1

Query:    1 RWL-DLYGDERRRQYAGMLRRDRARLPPHV----AVAFAGLSKDRQNQSILVSGESGAGKTETVKILMGHLSVASSTGGGEGTEAAVPEPGRRREGERDNEGVIKKIIESNPLLESFGNAQTTRNDNSSRFGKFTQLQFDGEFRMSGSGCTTYLLEKSRVVGHEPGERAYHVFYQ 510
            RW  +LY D++R++Y      DR +L PHV    + A++GL + + NQ+ILVSGESGAGKTETVKILM HL+  +S+                     D+   IK+I+ESNPLLESFGNAQT RNDNSSRFGKF +LQ +   R+ GS C TYLLEKSRVVG + GER +H+FYQ
Sbjct:  114 RWFPELYTDDKRKEYLVF---DRPKLDPHVYTTSSFAYSGLQETKSNQTILVSGESGAGKTETVKILMAHLAFMASS---------------------DDTSHIKRIVESNPLLESFGNAQTVRNDNSSRFGKFIELQLNSGCRLEGSKCRTYLLEKSRVVGQDSGERNFHIFYQ 264

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BLAST of mRNA_H-paniculata_contig6903.14831.1 vs. uniprot
Match: T0Q687_SAPDV (Myosin motor domain-containing protein n=3 Tax=Saprolegnia TaxID=4769 RepID=T0Q687_SAPDV)

HSP 1 Score: 163 bits (413), Expect = 1.780e-43
Identity = 93/173 (53.76%), Postives = 112/173 (64.74%), Query Frame = 1

Query:    4 WLDLYGDERRRQYAGMLRRDRARLPPHV----AVAFAGLSKDRQNQSILVSGESGAGKTETVKILMGHLSVASSTGGGEGTEAAVPEPGRRREGERDNEGVIKKIIESNPLLESFGNAQTTRNDNSSRFGKFTQLQFDGEFRMSGSGCTTYLLEKSRVVGHEPGERAYHVFYQ 510
            WL+LY  E +R YAG    DR+ LPPHV    A AF  ++   + QSILVSGESGAGKTETVKI+M HL+  S+                       N  +I K+++SNPLLE+FGNA+T RNDNSSRFGKFTQLQFD + RM G+ C  YLLEKSRV+G    ER YH+FYQ
Sbjct:  121 WLNLYSKETQRLYAG----DRSGLPPHVYATSAAAFESMALYDRPQSILVSGESGAGKTETVKIMMEHLASLSTD---------------------PNMSIIDKVLKSNPLLEAFGNAKTVRNDNSSRFGKFTQLQFDADQRMVGAKCRHYLLEKSRVIGQAEYERNYHIFYQ 268

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BLAST of mRNA_H-paniculata_contig6903.14831.1 vs. uniprot
Match: A0A6A4YJX9_9STRA (Myosin motor domain-containing protein (Fragment) n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4YJX9_9STRA)

HSP 1 Score: 155 bits (393), Expect = 2.780e-43
Identity = 92/174 (52.87%), Postives = 112/174 (64.37%), Query Frame = 1

Query:    1 RWLDLYGDERRRQYAGMLRRDRARLPPHVAV----AFAGLSKDRQNQSILVSGESGAGKTETVKILMGHLSVASSTGGGEGTEAAVPEPGRRREGERDNEGVIKKIIESNPLLESFGNAQTTRNDNSSRFGKFTQLQFDGEFRMSGSGCTTYLLEKSRVVGHEPGERAYHVFYQ 510
            +WLDLYG +   QY  M R +   L PH       A+  ++K+   QSILVSGESGAGKTETVKI+M HL  AS +GGG+                     VI ++++SNPLLE+FGNA+T RNDNSSRFGKF QLQF+ E  + G+ C TYLLEKSRVVG   GER YH+FYQ
Sbjct:  119 KWLDLYGKDLYLQYLNMPRNE---LAPHPFALSSGAYIDMNKNGIEQSILVSGESGAGKTETVKIMMNHL--ASISGGGDHGSL-----------------VIDQVLKSNPLLEAFGNAKTKRNDNSSRFGKFAQLQFNPEGLLVGARCETYLLEKSRVVGQAQGERNYHIFYQ 270

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BLAST of mRNA_H-paniculata_contig6903.14831.1 vs. uniprot
Match: A0A421GKF2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GKF2_9STRA)

HSP 1 Score: 162 bits (411), Expect = 3.300e-43
Identity = 96/174 (55.17%), Postives = 118/174 (67.82%), Query Frame = 1

Query:    4 WLDLYGDERRRQYAGMLRRDRARLPPHV----AVAFAGLSKDRQNQSILVSGESGAGKTETVKILMGHLSVASSTGGGE-GTEAAVPEPGRRREGERDNEGVIKKIIESNPLLESFGNAQTTRNDNSSRFGKFTQLQFDGEFRMSGSGCTTYLLEKSRVVGHEPGERAYHVFYQ 510
            WLDLYG E  +QY   L + R  LPPH     A+++  + + + +QSILVSGESGAGKTETVKI+M HL  AS +GGG+ GT+                  VI ++++SNPLLESFGNA+T RNDNSSRFGKF QLQFD   ++ G+ C TYLLEKSRVVG   GER YH+FYQ
Sbjct:  130 WLDLYGRELYQQY---LDQPRDSLPPHPFALSAMSYVDMKRTQVDQSILVSGESGAGKTETVKIMMNHL--ASISGGGQQGTK------------------VIDQVLKSNPLLESFGNAKTKRNDNSSRFGKFAQLQFDNVGQLVGALCETYLLEKSRVVGQAEGERNYHIFYQ 280

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BLAST of mRNA_H-paniculata_contig6903.14831.1 vs. uniprot
Match: A0A397BCU1_9STRA (Myosin motor domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BCU1_9STRA)

HSP 1 Score: 157 bits (398), Expect = 5.480e-43
Identity = 94/174 (54.02%), Postives = 107/174 (61.49%), Query Frame = 1

Query:    4 WL-DLYGDERRRQYAGMLRRDRARLPPHV----AVAFAGLSKDRQNQSILVSGESGAGKTETVKILMGHLSVASSTGGGEGTEAAVPEPGRRREGERDNEGVIKKIIESNPLLESFGNAQTTRNDNSSRFGKFTQLQFDGEFRMSGSGCTTYLLEKSRVVGHEPGERAYHVFYQ 510
            WL +LY D+   Q+    R  R  LPPHV      A+  +  D +NQS+LVSGESGAGKTET KILM HL  AS  GG                     +  I KII  NPLLESFGNA+T RNDNSSRFGKFTQLQFD    + G+ C TYLLEK+RVV HEP ER YH+FYQ
Sbjct:  130 WLGELYSDD---QHLAYQRLGRDELPPHVYATSVAAYRSMLHDHRNQSVLVSGESGAGKTETTKILMNHL--ASIAGG-------------------LRDATIAKIIMVNPLLESFGNAKTLRNDNSSRFGKFTQLQFDAHGTLVGAQCKTYLLEKTRVVTHEPSERNYHIFYQ 279

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig6903.14831.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig6903.14831.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LHM3_ECTSI	3.700e-75	78.16	Myosin motor domain-containing protein n=1 Tax=Ect...	[more]
A0A7S1ADB9_NOCSC	5.020e-46	54.39	Hypothetical protein n=1 Tax=Noctiluca scintillans...	[more]
A0A7S4WAU7_9DINO	6.860e-46	54.29	Hypothetical protein (Fragment) n=1 Tax=Alexandriu...	[more]
A0A7S2KNJ8_9STRA	1.580e-45	50.26	Hypothetical protein (Fragment) n=1 Tax=Leptocylin...	[more]
A0A835YXJ7_9STRA	4.310e-45	53.54	P-loop containing nucleoside triphosphate hydrolas...	[more]
A0A812ZCM6_9DINO	8.130e-45	53.14	Myo5a protein n=3 Tax=Symbiodinium TaxID=2949 RepI...	[more]
T0Q687_SAPDV	1.780e-43	53.76	Myosin motor domain-containing protein n=3 Tax=Sap...	[more]
A0A6A4YJX9_9STRA	2.780e-43	52.87	Myosin motor domain-containing protein (Fragment) ...	[more]
A0A421GKF2_9STRA	3.300e-43	55.17	Uncharacterized protein n=3 Tax=Phytophthora kerno...	[more]
A0A397BCU1_9STRA	5.480e-43	54.02	Myosin motor domain-containing protein n=2 Tax=Aph...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig6903	contig	H-paniculata_contig6903:8655..11532 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	254.6
Seed ortholog evalue	3.3e-65
Seed eggNOG ortholog	2880.D8LHM3
Preferred name	MYO19
KEGG ko	ko:K10356,ko:K10357,ko:K22366
Hectar predicted targeting category	other localisation
GOs	GO:0000001,GO:0000003,GO:0000011,GO:0000131,GO:0000132,GO:0000146,GO:0000149,GO:0000166,GO:0000226,GO:0000278,GO:0000281,GO:0000302,GO:0000331,GO:0000902,GO:0000904,GO:0000910,GO:0000912,GO:0000915,GO:0001101,GO:0001558,GO:0001654,GO:0001676,GO:0001726,GO:0001745,GO:0001750,GO:0001751,GO:0001754,GO:0001891,GO:0001931,GO:0001942,GO:0002250,GO:0002252,GO:0002253,GO:0002376,GO:0002429,GO:0002431,GO:0002433,GO:0002443,GO:0002449,GO:0002456,GO:0002460,GO:0002682,GO:0002684,GO:0002757,GO:0002764,GO:0002768,GO:0002790,GO:0003006,GO:0003008,GO:0003014,GO:0003091,GO:0003674,GO:0003774,GO:0003779,GO:0003824,GO:0005102,GO:0005488,GO:0005509,GO:0005515,GO:0005516,GO:0005524,GO:0005543,GO:0005546,GO:0005547,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005768,GO:0005773,GO:0005794,GO:0005826,GO:0005829,GO:0005856,GO:0005882,GO:0005884,GO:0005886,GO:0005902,GO:0005903,GO:0005911,GO:0005929,GO:0005933,GO:0005934,GO:0005935,GO:0005937,GO:0005938,GO:0006082,GO:0006403,GO:0006582,GO:0006629,GO:0006631,GO:0006633,GO:0006725,GO:0006810,GO:0006886,GO:0006887,GO:0006892,GO:0006897,GO:0006904,GO:0006909,GO:0006928,GO:0006935,GO:0006950,GO:0006955,GO:0006970,GO:0006971,GO:0006979,GO:0006996,GO:0007005,GO:0007010,GO:0007015,GO:0007017,GO:0007018,GO:0007029,GO:0007030,GO:0007031,GO:0007033,GO:0007049,GO:0007097,GO:0007107,GO:0007114,GO:0007117,GO:0007118,GO:0007154,GO:0007155,GO:0007163,GO:0007165,GO:0007166,GO:0007267,GO:0007268,GO:0007272,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007291,GO:0007317,GO:0007349,GO:0007399,GO:0007423,GO:0007530,GO:0007531,GO:0007533,GO:0007584,GO:0007600,GO:0007601,GO:0007610,GO:0007626,GO:0008021,GO:0008064,GO:0008088,GO:0008092,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008289,GO:0008298,GO:0008360,GO:0008361,GO:0008366,GO:0008544,GO:0008610,GO:0009058,GO:0009267,GO:0009306,GO:0009506,GO:0009581,GO:0009582,GO:0009605,GO:0009612,GO:0009628,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009791,GO:0009826,GO:0009856,GO:0009860,GO:0009887,GO:0009888,GO:0009908,GO:0009914,GO:0009932,GO:0009966,GO:0009987,GO:0009991,GO:0010015,GO:0010026,GO:0010033,GO:0010035,GO:0010053,GO:0010054,GO:0010090,GO:0010091,GO:0010154,GO:0010243,GO:0010256,GO:0010522,GO:0010564,GO:0010639,GO:0010646,GO:0010720,GO:0010769,GO:0010770,GO:0010817,GO:0010821,GO:0010959,GO:0010970,GO:0010975,GO:0010976,GO:0012505,GO:0012506,GO:0014070,GO:0014074,GO:0014910,GO:0014911,GO:0015031,GO:0015629,GO:0015833,GO:0016020,GO:0016028,GO:0016043,GO:0016049,GO:0016050,GO:0016053,GO:0016192,GO:0016197,GO:0016358,GO:0016459,GO:0016460,GO:0016461,GO:0016462,GO:0016477,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017016,GO:0017022,GO:0017075,GO:0017076,GO:0017111,GO:0017137,GO:0017157,GO:0018958,GO:0019438,GO:0019748,GO:0019752,GO:0019867,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0019905,GO:0019953,GO:0019954,GO:0021700,GO:0022008,GO:0022402,GO:0022404,GO:0022405,GO:0022406,GO:0022412,GO:0022413,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0022610,GO:0022622,GO:0022898,GO:0023051,GO:0023052,GO:0023061,GO:0030010,GO:0030027,GO:0030029,GO:0030030,GO:0030031,GO:0030036,GO:0030038,GO:0030046,GO:0030048,GO:0030050,GO:0030054,GO:0030072,GO:0030073,GO:0030104,GO:0030133,GO:0030139,GO:0030141,GO:0030154,GO:0030175,GO:0030182,GO:0030307,GO:0030318,GO:0030334,GO:0030335,GO:0030424,GO:0030425,GO:0030426,GO:0030427,GO:0030479,GO:0030516,GO:0030554,GO:0030587,GO:0030659,GO:0030705,GO:0030832,GO:0030833,GO:0030837,GO:0030863,GO:0030864,GO:0030865,GO:0030866,GO:0030898,GO:0030899,GO:0031032,GO:0031033,GO:0031034,GO:0031090,GO:0031097,GO:0031152,GO:0031154,GO:0031175,GO:0031252,GO:0031254,GO:0031256,GO:0031267,GO:0031268,GO:0031270,GO:0031333,GO:0031344,GO:0031346,GO:0031410,GO:0031475,GO:0031585,GO:0031589,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031941,GO:0031965,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0031982,GO:0031987,GO:0032009,GO:0032027,GO:0032060,GO:0032153,GO:0032155,GO:0032252,GO:0032271,GO:0032272,GO:0032400,GO:0032401,GO:0032402,GO:0032409,GO:0032412,GO:0032432,GO:0032433,GO:0032465,GO:0032501,GO:0032502,GO:0032504,GO:0032505,GO:0032506,GO:0032535,GO:0032553,GO:0032555,GO:0032559,GO:0032593,GO:0032787,GO:0032796,GO:0032868,GO:0032869,GO:0032870,GO:0032878,GO:0032879,GO:0032880,GO:0032940,GO:0032956,GO:0032970,GO:0032982,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033059,GO:0033267,GO:0033275,GO:0033298,GO:0033365,GO:0033554,GO:0034461,GO:0034613,GO:0034622,GO:0034642,GO:0034643,GO:0034762,GO:0034765,GO:0035091,GO:0035254,GO:0035255,GO:0035618,GO:0035619,GO:0035639,GO:0035690,GO:0035838,GO:0036094,GO:0036477,GO:0038093,GO:0038094,GO:0038096,GO:0040001,GO:0040007,GO:0040008,GO:0040011,GO:0040012,GO:0040017,GO:0040019,GO:0042051,GO:0042052,GO:0042221,GO:0042303,GO:0042330,GO:0042438,GO:0042440,GO:0042461,GO:0042462,GO:0042470,GO:0042476,GO:0042493,GO:0042542,GO:0042552,GO:0042592,GO:0042594,GO:0042623,GO:0042633,GO:0042641,GO:0042642,GO:0042759,GO:0042802,GO:0042803,GO:0042886,GO:0042995,GO:0043005,GO:0043008,GO:0043025,GO:0043167,GO:0043168,GO:0043169,GO:0043197,GO:0043200,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043254,GO:0043269,GO:0043325,GO:0043332,GO:0043434,GO:0043436,GO:0043473,GO:0043531,GO:0043588,GO:0043900,GO:0043902,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044297,GO:0044309,GO:0044380,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044430,GO:0044433,GO:0044441,GO:0044444,GO:0044446,GO:0044448,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0044550,GO:0044703,GO:0044706,GO:0044764,GO:0044837,GO:0044877,GO:0045033,GO:0045111,GO:0045165,GO:0045177,GO:0045179,GO:0045184,GO:0045202,GO:0045335,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045773,GO:0045856,GO:0045921,GO:0045927,GO:0045995,GO:0046148,GO:0046189,GO:0046394,GO:0046530,GO:0046677,GO:0046683,GO:0046847,GO:0046872,GO:0046879,GO:0046903,GO:0046907,GO:0046982,GO:0046983,GO:0047497,GO:0048066,GO:0048193,GO:0048232,GO:0048278,GO:0048306,GO:0048308,GO:0048309,GO:0048311,GO:0048313,GO:0048364,GO:0048366,GO:0048367,GO:0048438,GO:0048467,GO:0048468,GO:0048469,GO:0048471,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048588,GO:0048589,GO:0048592,GO:0048608,GO:0048609,GO:0048638,GO:0048639,GO:0048646,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048749,GO:0048764,GO:0048765,GO:0048767,GO:0048768,GO:0048770,GO:0048812,GO:0048813,GO:0048814,GO:0048820,GO:0048827,GO:0048856,GO:0048858,GO:0048868,GO:0048869,GO:0048870,GO:0048871,GO:0048878,GO:0050767,GO:0050769,GO:0050770,GO:0050772,GO:0050773,GO:0050775,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050808,GO:0050848,GO:0050877,GO:0050878,GO:0050891,GO:0050896,GO:0050900,GO:0050931,GO:0050953,GO:0050982,GO:0051015,GO:0051017,GO:0051020,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051270,GO:0051272,GO:0051279,GO:0051282,GO:0051285,GO:0051286,GO:0051293,GO:0051294,GO:0051301,GO:0051302,GO:0051493,GO:0051494,GO:0051591,GO:0051606,GO:0051640,GO:0051641,GO:0051643,GO:0051645,GO:0051646,GO:0051647,GO:0051648,GO:0051649,GO:0051650,GO:0051653,GO:0051654,GO:0051656,GO:0051674,GO:0051686,GO:0051703,GO:0051704,GO:0051716,GO:0051726,GO:0051875,GO:0051904,GO:0051905,GO:0051924,GO:0051960,GO:0051962,GO:0055037,GO:0055044,GO:0060001,GO:0060002,GO:0060151,GO:0060281,GO:0060282,GO:0060284,GO:0060327,GO:0060328,GO:0060341,GO:0060429,GO:0060560,GO:0060627,GO:0060996,GO:0060997,GO:0061024,GO:0061387,GO:0061458,GO:0061572,GO:0061573,GO:0061640,GO:0061645,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070382,GO:0070648,GO:0070649,GO:0070650,GO:0070727,GO:0070887,GO:0070938,GO:0071229,GO:0071230,GO:0071310,GO:0071375,GO:0071417,GO:0071495,GO:0071496,GO:0071520,GO:0071563,GO:0071695,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071889,GO:0071944,GO:0071963,GO:0071976,GO:0072330,GO:0072384,GO:0072657,GO:0072659,GO:0072676,GO:0072678,GO:0072697,GO:0080147,GO:0090066,GO:0090140,GO:0090426,GO:0090436,GO:0090558,GO:0090567,GO:0090596,GO:0090626,GO:0090627,GO:0090702,GO:0090726,GO:0097061,GO:0097159,GO:0097204,GO:0097367,GO:0097435,GO:0097447,GO:0097458,GO:0097518,GO:0097574,GO:0097575,GO:0097708,GO:0097718,GO:0097730,GO:0097731,GO:0097733,GO:0098588,GO:0098630,GO:0098657,GO:0098743,GO:0098773,GO:0098793,GO:0098794,GO:0098805,GO:0098840,GO:0098858,GO:0098862,GO:0098916,GO:0099080,GO:0099081,GO:0099089,GO:0099111,GO:0099118,GO:0099120,GO:0099173,GO:0099402,GO:0099503,GO:0099512,GO:0099513,GO:0099515,GO:0099518,GO:0099536,GO:0099537,GO:0099568,GO:0099640,GO:0099738,GO:0106027,GO:0110009,GO:0110053,GO:0120025,GO:0120031,GO:0120035,GO:0120036,GO:0120038,GO:0120039,GO:0120104,GO:0120117,GO:0140027,GO:0140029,GO:0140056,GO:0150034,GO:1900006,GO:1900076,GO:1900078,GO:1901019,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901615,GO:1901617,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901981,GO:1902407,GO:1902410,GO:1902531,GO:1902716,GO:1902850,GO:1902875,GO:1902877,GO:1902903,GO:1902904,GO:1902936,GO:1903047,GO:1903076,GO:1903078,GO:1903119,GO:1903169,GO:1903260,GO:1903429,GO:1903431,GO:1903475,GO:1903478,GO:1903479,GO:1903530,GO:1903532,GO:1903541,GO:1903543,GO:1903827,GO:1903829,GO:1904062,GO:1904375,GO:1904377,GO:1904580,GO:1904582,GO:1904601,GO:1904752,GO:1904754,GO:1905392,GO:1905429,GO:1905430,GO:1905475,GO:1905477,GO:1905879,GO:1905881,GO:1990151,GO:1990753,GO:1990778,GO:1990819,GO:1990896,GO:1990904,GO:2000026,GO:2000145,GO:2000147,GO:2000241,GO:2000243,GO:2000689,GO:2000769,GO:2001257
EggNOG free text desc.	translation initiation factor activity
EggNOG OGs	COG5022@1,KOG0160@2759
Ec32 ortholog description	P-loop containing nucleoside triphosphate hydrolase
Ec32 ortholog	Ec-26_003660.1
COG Functional cat.	Z
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko01009,ko03019,ko03029,ko03036,ko04131,ko04147,ko04812
Exons	3
Model size	514
Cds size	513
Stop	0
Start	0

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig6903.14831.1	prot_H-paniculata_contig6903.14831.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig6903 8656..11532 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930827.695202-CDS-H-paniculata_contig6903:8655..8794	1622930827.695202-CDS-H-paniculata_contig6903:8655..8794	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig6903 8656..8794 -
1691481470.5351565-CDS-H-paniculata_contig6903:8655..8794	1691481470.5351565-CDS-H-paniculata_contig6903:8655..8794	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig6903 8656..8794 -
1622930827.7155957-CDS-H-paniculata_contig6903:10445..10733	1622930827.7155957-CDS-H-paniculata_contig6903:10445..10733	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig6903 10446..10733 -
1691481470.5498483-CDS-H-paniculata_contig6903:10445..10733	1691481470.5498483-CDS-H-paniculata_contig6903:10445..10733	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig6903 10446..10733 -
1622930827.7313156-CDS-H-paniculata_contig6903:11446..11532	1622930827.7313156-CDS-H-paniculata_contig6903:11446..11532	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig6903 11447..11532 -
1691481470.5593722-CDS-H-paniculata_contig6903:11446..11532	1691481470.5593722-CDS-H-paniculata_contig6903:11446..11532	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig6903 11447..11532 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig6903:8655..11532-
coding sequence from alignment at H-paniculata_contig6903:8655..11532-

protein sequence of mRNA_H-paniculata_contig6903.14831.1

>prot_H-paniculata_contig6903.14831.1 ID=prot_H-paniculata_contig6903.14831.1|Name=mRNA_H-paniculata_contig6903.14831.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=171bp
RWLDLYGDERRRQYAGMLRRDRARLPPHVAVAFAGLSKDRQNQSILVSGE
SGAGKTETVKILMGHLSVASSTGGGEGTEAAVPEPGRRREGERDNEGVIK
KIIESNPLLESFGNAQTTRNDNSSRFGKFTQLQFDGEFRMSGSGCTTYLL
EKSRVVGHEPGERAYHVFYQA

mRNA from alignment at H-paniculata_contig6903:8655..11532-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig6903.14831.1 ID=mRNA_H-paniculata_contig6903.14831.1|Name=mRNA_H-paniculata_contig6903.14831.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2878bp|location=Sequence derived from alignment at H-paniculata_contig6903:8655..11532- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGTGGCTGGACTTGTATGGCGACGAAAGGCGGAGGCAATACGCGGGCAT
GCTCAGACGGGACCGAGCACGCCTTCCCCCTCACGTGTACTCCACAAGGC
GAGCATAAGGGTGGGAGGGGGTTGTTGGGCTAGTGGTGGTGGTGATGGTG
GTGTTGAATCTTAGGGTTAAGGTTAGGGTGGGTTGTGATTTTGTTGCTTG
TTTTTTCTCCAACTACTTTCATAAATGATTTTTTTTTCATTTATTGTCAA
GTCGATATTTACTTCTTGAAAAGGTTATGTCTATATTTTTACAGCTCGCA
CTGCAGGAAAGGAACAGTAACGTTTAGCGTCAAGGTATGCAAAGCTAGCA
GAGGGTTTAGGGTTTCAGGTTGTGGTACATTCCGGGTGCTGCTGGTGGAT
CGTTGGGTCCTGACGTGAACCGGCGGCACATCTGGCATCCTTCACGTCTC
CTCCGTGCGCCCCCCCCCCCGCCCCGCCTCTCCCCGACTAATAACCTTAT
GTCTCTCAGCTATGCATCCAGTGTTATTCTTCAAAGAGAAGCCGTACATG
GCTGCACAAGTTTCGCTAACACGCACCTAATCAATCCTTTTTTTTTTTAC
CCGATTACCACCCCGTCCTTGTTTCACAGTGCTTCCAAAACCCTTTCGCC
GTCCATGTTTCTCTCTCTCTCTCTCTCTCTCTCTATGTGCGTGTGTGTGT
GTGTGCGTGTGTCTGCGTCTCTCGCTCTCCCCCCCTATTTTCCGACCGAT
TTATTACTGGTGAAAAATTACATAACCCCAAACCAACCCATAACAACAGT
GCGGTCGCCTTCGCCGGCCTGTCCAAAGATCGACAAAATCAGAGCATCCT
GGTGAGTGGCGAGTCGGGAGCCGGAAAAACCGAAACGGTCAAGATTCTCA
TGGGGCACCTGTCCGTGGCAAGCAGTACCGGTGGGGGGGAGGGGACAGAA
GCGGCAGTTCCGGAACCGGGGAGAAGAAGAGAGGGAGAGCGAGATAACGA
AGGCGTCATCAAGAAGATCATCGAGAGCAATCCTTTACTGGAGAGCTTTG
GAAATGCTCAGACAACTCGAAATGACAACAGCAGTCGGTGAGATGAGACG
AACAGAGGGCCTCGACGGGTAGGCGCGGGGGGGTACGTACTATGTGTATC
CAGTGTATGGTAGCAGTGAAGTGGTGTTATTATTATAGCATGATCGTGCA
GCTCAAATGTAAAGATGAGAAAACAAAACAAAACAAAACATTGTTGAGTG
TATTTGTAGTTGGGAACAAAGAGATGATGCAGGAAAAACATGCGGCTAAA
CCTTGACAACGGGGGGGGGGGGAGGAAGCACTGTTGAGGTGATTTTGTGG
TCTTTTGCATTTGGTAGGTGTAAGAGATCATCCGGAAAGATGTCATGAAG
ATGACAACAACAAAAAGCGGTCTTTAAAATTTGCTTTGTGATCGTGACCG
TCAGTATGCAACCTTGAAAGTGGCGAGGTAATGCTGAGGTTCGTGTGATT
TTTGTCAAGATTGCTACTGTAGTACAGATCAAATATCATGTTCGGGGCTT
AGATTTAGATCTATCATGGTGTATGTGTGGGATCATGTCGATATGGCAGT
ACTTTGATTCATGTATCAAACCCTATGTATGGGGCACATGTCAAAGACGG
TGTATAGGTGGGATCATATGGAGACTTTTATGCTTTGTTTATGTATACAA
TGGCTCCAGCAGTATGTATATATCCTAAATGTGTGACTCTCTAGCGAGTT
AAGTAAAGCACCGTGACCTATCATGTCATGTCATGACACGTCGAATAGTA
CTTGGCATCGGTTGCACTTCTGTGGGTGTGAAGAATCCACCGGGTCCGTA
TTCGATTGAATTTGTATGTTGTCGACTCACTCTAAACCCATGTTGATGTC
CAAGGATCTCAATTGAGCCATTGAAGAAATCGCCGCCCCACAGTAAGACG
GTCAATGGTGGAGTTCAAGCTGCCCAGGGATATATACACCCCTATGTTTA
TTCTTGTTTTCTTCAAGCAGATTGAACCAAAGATATTTTGTTGTTAGTTA
ATGACACTTATTTAGTTTTGCATAAGCCAGTAATTATTATTTTTTATTTA
TTAAAAGGGATAATATTTTGTATTTACTCGAATTTTTTTTGCTTTTTTTT
ATTAGTTGGGTTGGGTACCACTTATCATTTTTTATAAAAACCCAATCGTA
TTTTTTTTATTAGTTATTAAGCTTTCTAAACAAGATTCTAAATTTTGTAT
TTTAATTGGAAATATTCGGATTATTAAAACACCCTCCAGTAAGTTTTGGG
GGTTCTGTGTATGACAGTGCTGAATGGCATTAAAATGCTGCAAGGGTTGA
CGTTTGGCTGGTGCAGCGTTGAAAGCTGACTTTACGGTGTTGTTTTCAGT
CGACCATGCAAATATTTGACGCTCACATACATGCAAAAGTAAATAAACAT
GAACACGATGTAGTTGATACTTATATTCATCTATATTACGTCTCGGGGTA
AAAGTTGAAAAAAGACATACACGTATCACCCTTTTTGTTCACACACAGGA
CGTGGCTGTTTTTTTAAAACATGCACACTGTCTATACAGACCAAGACAAA
ATCGTTATTGTACATGTTATTATTCATAATGAGTGGATCCAAAATGAATC
AACTACGAAAAAAAAAACAAAAAACTATCATCGTGATATCTAACTTTTTT
TTTTTTTTCTCTCTCTTTTTTTCTTATCCTGAATATAGGTTCGGGAAATT
TACACAGCTTCAATTCGACGGGGAGTTCCGCATGTCCGGGTCCGGGTGCA
CGACCTACCTTTTGGAGAAGAGCCGGGTTGTGGGACACGAGCCGGGAGAG
AGGGCTTACCACGTCTTTTACCAGGCGA

Coding sequence (CDS) from alignment at H-paniculata_contig6903:8655..11532-

>mRNA_H-paniculata_contig6903.14831.1 ID=mRNA_H-paniculata_contig6903.14831.1|Name=mRNA_H-paniculata_contig6903.14831.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1026bp|location=Sequence derived from alignment at H-paniculata_contig6903:8655..11532- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGTGGCTGGACTTGTATGGCGACGAAAGGCGGAGGCAATACGCGGGCAT
GCTCAGACGGGACCGAGCACGCCTTCCCCCTCACGTAGGTGGCTGGACTT
GTATGGCGACGAAAGGCGGAGGCAATACGCGGGCATGCTCAGACGGGACC
GAGCACGCCTTCCCCCTCACGTTGCGGTCGCCTTCGCCGGCCTGTCCAAA
GATCGACAAAATCAGAGCATCCTGGTGAGTGGCGAGTCGGGAGCCGGAAA
AACCGAAACGGTCAAGATTCTCATGGGGCACCTGTCCGTGGCAAGCAGTA
CCGGTGGGGGGGAGGGGACAGAAGCGGCAGTTCCGGAACCGGGGAGAAGA
AGAGAGGGAGAGCGAGATAACGAAGGCGTCATCAAGAAGATCATCGAGAG
CAATCCTTTACTGGAGAGCTTTGGAAATGCTCAGACAACTCGAAATGACA
ACAGCAGTCGTGCGGTCGCCTTCGCCGGCCTGTCCAAAGATCGACAAAAT
CAGAGCATCCTGGTGAGTGGCGAGTCGGGAGCCGGAAAAACCGAAACGGT
CAAGATTCTCATGGGGCACCTGTCCGTGGCAAGCAGTACCGGTGGGGGGG
AGGGGACAGAAGCGGCAGTTCCGGAACCGGGGAGAAGAAGAGAGGGAGAG
CGAGATAACGAAGGCGTCATCAAGAAGATCATCGAGAGCAATCCTTTACT
GGAGAGCTTTGGAAATGCTCAGACAACTCGAAATGACAACAGCAGTCGGT
TCGGGAAATTTACACAGCTTCAATTCGACGGGGAGTTCCGCATGTCCGGG
TCCGGGTGCACGACCTACCTTTTGGAGAAGAGCCGGGTTGTGGGACACGA
GCCGGGAGAGAGGGCTTACCACGTCTTTTACCAGGCGGTTCGGGAAATTT
ACACAGCTTCAATTCGACGGGGAGTTCCGCATGTCCGGGTCCGGGTGCAC
GACCTACCTTTTGGAGAAGAGCCGGGTTGTGGGACACGAGCCGGGAGAGA
GGGCTTACCACGTCTTTTACCAGGCG