mRNA_H-paniculata_contig6885.14808.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig6885.14808.1
Unique NamemRNA_H-paniculata_contig6885.14808.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig6885.14808.1 vs. uniprot
Match: A0A6S7JEY7_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JEY7_PARCT)

HSP 1 Score: 197 bits (500), Expect = 1.710e-54
Identity = 122/333 (36.64%), Postives = 190/333 (57.06%), Query Frame = 1
Query:    7 SLKPVPPQSTLRTIFSLAAKHHFELEGMDIDAAYLNAPVEEELFVKLPAEFYSFSRDIPFVRRLR-----LQRS-------------------TTG-PCLYFSRDEGGETDILVAVCIDDLVNVGRCE-KVNEFKYSISQRFRMKDLGSLSRMLGIEVRRDGPNGTISISQGGYIREVLKRCGLDKCRGVPTSVKGIVKIL-ALDSGRSGNSTEYRGMVGPLMYASTGTRPDMAYAVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITLAGKSNGHSLEGFVDADRAEDVEDRKSTTGYVFKLNDSAISWCSRKQQLVTWSSTEAEYVVV 924
            +  PV    ++RT+ +LAA+H  +L  MD+  A+LN  ++EE+++K P  F    ++   V RLR     L++S                   TTG PC+Y  ++EGGE   ++AV +DD++  G+ + K+NE K +++++F+MKD+G     LG++V +   +  I I Q  Y + VL+R G++  +   T V    K+  A D  +  +   Y+  VG L+Y ST TRPD+AYAV   AR    P  E +   KRI RYL+   D+G+   G     S  G+ DAD A D++DRKST+GYVF+++++AISW S+KQ  V  S+ EAEY+ +
Sbjct:  213 TFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQPEGFIDKGKE-HLVCRLRRSICGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQRHYFLGVKVIQKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSAHPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMTL 542          
BLAST of mRNA_H-paniculata_contig6885.14808.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT)

HSP 1 Score: 197 bits (502), Expect = 1.850e-54
Identity = 123/333 (36.94%), Postives = 190/333 (57.06%), Query Frame = 1
Query:    7 SLKPVPPQSTLRTIFSLAAKHHFELEGMDIDAAYLNAPVEEELFVKLPAEFYSFSRDIPFVRRLR-----LQRS-------------------TTG-PCLYFSRDEGGETDILVAVCIDDLVNVGRCE-KVNEFKYSISQRFRMKDLGSLSRMLGIEVRRDGPNGTISISQGGYIREVLKRCGLDKCRGVPTSVKGIVKIL-ALDSGRSGNSTEYRGMVGPLMYASTGTRPDMAYAVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITLAGKSNGHSLEGFVDADRAEDVEDRKSTTGYVFKLNDSAISWCSRKQQLVTWSSTEAEYVVV 924
            +  PV    ++RT+ +LAA+H  +L  MD+  A+LN  ++EE+++K    F    ++   V RLR     L++S                   TTG PC+Y  ++EGGE   ++AV +DD++  G+ + K+NE K +++++F+MKD+G L   LG++V     +  I I Q  Y + VL+R G++  +   T V    K+  A D  +  +   Y+  VG L+Y ST TRPD+AYAV   AR   DP  E +   KRI RYL+   D+G+   G     S  G+ DAD A D++DRKST+GYVF+++++AISW S+KQ  V  S+ EAEY+ +
Sbjct:   65 TFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQTEGFIEKGKE-HLVCRLRRSIYGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIPKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMAL 394          
BLAST of mRNA_H-paniculata_contig6885.14808.1 vs. uniprot
Match: A0A6G0X2D0_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X2D0_9STRA)

HSP 1 Score: 180 bits (457), Expect = 7.510e-50
Identity = 117/344 (34.01%), Postives = 187/344 (54.36%), Query Frame = 1
Query:   16 PVPPQSTLRTIFSLAAKHHFELEGMDIDAAYLNAPVEEELFVKLPAEFYSFS-------------------RDIP---------FVRRLRLQRSTTGPCLYFSRDEGGETDILVAVCIDDLVNVGRCEKVNEF-KYSISQRFRMKDLGSLSRMLGIEVRRDGPNGTISISQGGYIREVLKRCGLDKCRGVPT---SVKGIVKILA-------LDSGRSGNSTEYRGMVGPLMYASTGTRPDMAYAVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITLAGKSNGHSLEGFVDADRAEDVEDRKSTTGYVFKLNDSAISWCSRKQQLVTWSSTEAEYVVVGE 930
            PV   +++R + S AAK++ +L+ MD++ A+LN+ ++E++++++P +    +                   +  P         F+  +R+ +S    C+Y  R   G   +LV++ +DDL+    C K+ +  K ++S+RF+M DLG+LS  LGIEV R  P+G++ I Q  +++ VL +  +  C+ V T   S + + K +         D GR     +YR  VG LMY    TRPD+A AV  A++ +E+P +  +S  KRIFRYL    D GI  +G  +   + G+ DAD   D   R ST+GY F LN+  +SW SRKQ+ V  SSTEAEY+ + E
Sbjct:   17 PVAKFTSIRVLLSTAAKYNLDLQQMDVNTAFLNSDLDEDIYMQVPDDLDVKATQGQTSKLVLKLKKSLCGLKQAPRLWNETIDGFMLSIRIAKSNADHCIYVMRT--GSRVVLVSLYVDDLILASNCNKMMQATKEALSKRFKMTDLGALSYCLGIEVMRS-PSGSVFIHQSKFLKSVLVKFNMQGCKPVKTPQESGQRLSKYMCPTTDEEKTDMGR----IQYRSAVGCLMYLMVTTRPDIAVAVGVASQFLENPGQRHWSAVKRIFRYLKGTEDFGIKYSGSQD---VCGYTDADWVGDANTRHSTSGYCFMLNNGLVSWKSRKQRTVALSSTEAEYMGLSE 350          
BLAST of mRNA_H-paniculata_contig6885.14808.1 vs. uniprot
Match: A0A392MAT9_9FABA (Copia-type polyprotein (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392MAT9_9FABA)

HSP 1 Score: 181 bits (460), Expect = 1.720e-49
Identity = 116/327 (35.47%), Postives = 181/327 (55.35%), Query Frame = 1
Query:   16 PVPPQSTLRTIFSLAAKHHFELEGMDIDAAYLNAPVEEELFVKLPAEFYSFSRDIPFVRRLRLQRSTTGPCLYFSRDE---------------------GGETDILV-AVCIDDLVNVGRCEKV-NEFKYSISQRFRMKDLGSLSRMLGIEVRRDGPNGTISISQGGYIREVLKRCGLDKCRGVPTSVKGIVKILALDSGRSGNSTEYRGMVGPLMYASTGTRPDMAYAVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITLAGKSN-GHSLEGFVDADRAEDVEDRKSTTGYVFKLNDSAISWCSRKQQLVTWSSTEAEYVVV 924
            PV    T+R I + AA +  ++  +D+ +A+L+  + E+++V  P  + S ++++ +  +  L      P  ++S+ E                     GG+ +ILV ++ +DDL+  G  +++ NEFK S+ ++F M DLG +   LG+EV + G NG I ++Q  Y  E+L R G++ C  V + +    K++  ++    ++T Y+ MVG LMY    TRPD+AY+V   AR M+ P     +  KRI RYL      GI     S     L+G+ D+D A D++DRKSTTGYVF L   AISW S+KQ +VT S+TEAEYV V
Sbjct:  104 PVARWDTIRAILAFAANNGLKIFQLDVKSAFLHGELTEDIYVSQPLGYVSKNKNMVYKLKKALYGLKQAPRAWYSKIESYFTAEKFEKCPYEHTLFVKYGGKNEILVVSLYVDDLIYTGNDQRLMNEFKSSMKKQFAMTDLGKMRYFLGVEVNQ-GHNG-IFMTQQKYATEILSRFGMENCNQVSSPIVPGCKLVKNENEEGTDATLYKQMVGCLMYL-LATRPDLAYSVCLVARFMDRPTEAHVTAVKRIMRYLKGTLSFGIMYKSSSRIDMCLKGWCDSDYAGDLDDRKSTTGYVFMLGSGAISWSSKKQLIVTLSTTEAEYVSV 427          
BLAST of mRNA_H-paniculata_contig6885.14808.1 vs. uniprot
Match: A0A5S6Q3I8_TRIMR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6Q3I8_TRIMR)

HSP 1 Score: 181 bits (460), Expect = 2.420e-49
Identity = 110/328 (33.54%), Postives = 181/328 (55.18%), Query Frame = 1
Query:   16 PVPPQSTLRTIFSLAAKHHFELEGMDIDAAYLNAPVEEELFVKLPAEFYSFSRD--IPFVRR----------------------LRLQRSTTGPCLYFSRDEGGETDILVAVCIDDLVNVGRCEKVN-EFKYSISQRFRMKDLGSLSRMLGIEVRRDGPNGTISISQGGYIREVLKRCGLDKCRGVPTSVKGIVKILALDSGRSGNSTEYRGMVGPLMYASTGTRPDMAYAVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITLAGKSNGHSLEGFVDADRAEDVEDRKSTTGYVFKLNDSAISWCSRKQQLVTWSSTEAEYVVV 924
            PV    T+R + SLAA     +  +D+ AAYLN+P+EEEL+VK P  F    ++  +  +R+                      L  +++    CL+  +++ G    ++ + +DDL+ VG   K+  E    + + F+ KDLG +   LGI++ R+G +G+I + Q   I ++L++ GL +C+  PT ++     +  +S    ++T+YR  +G L+Y +T +RPD+A  V    R +E P   D+   KR+ RYL+    + + L+  + G  L+ +VDAD A D  DRKSTTG+VF+L  + ++W SRKQ +V  SSTEAEY+ V
Sbjct:  114 PVVKHDTVRVLLSLAAAQKLHVRHLDVKAAYLNSPLEEELYVKQPPGFEVQGQEHKVLLLRKSLYGLKQSARAWNKMATDTLTSLGFEQAMADHCLFSKKEKNGSRTYIL-IYVDDLLVVGATPKITKEVGIQMDKFFQTKDLGEVKNYLGIQIEREG-DGSILLHQRNKIEQLLEQYGLMECKPAPTPMETGFLSVNQESPPMPDNTKYRQAIGSLLYVATVSRPDIAAPVGFLCRHVEKPTEADWKAVKRVMRYLAATKYMTLRLSS-AGGIDLQCYVDADWAGDKADRKSTTGFVFQLGKNTVAWSSRKQSVVALSSTEAEYLAV 438          
BLAST of mRNA_H-paniculata_contig6885.14808.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY)

HSP 1 Score: 185 bits (469), Expect = 6.820e-49
Identity = 119/333 (35.74%), Postives = 171/333 (51.35%), Query Frame = 1
Query:   16 PVPPQSTLRTIFSLAAKHHFELEGMDIDAAYLNAPVEEELFVKLPAEF----------------YSFSRD--------IPFVRRLRLQRSTTGPCLYFSRDEGGETDILVAVCIDDLVNVGRCEKVNEFKYSISQRFRMKDLGSLSRMLGIEVRRDGPNGTISISQGGYIREVLKRCGLDKCRGVPTSVKGIVKILALDSGRSGNSTE------YRGMVGPLMYASTGTRPDMAYAVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITLAGKSNGHSLEGFVDADRAEDVEDRKSTTGYVFKLNDSAISWCSRKQQLVTWSSTEAEYVVV 924
            PV    ++RTI SLAA+H +EL  MD+ +AYLN  +EE ++++LP  F                Y   +            +  +   R      +++ R+  GE+ I+VA  +DDL   G  + V+ F   I QRF M DLG L  +LGIEVRRD    TI+ISQ  YI  ++ R  LD+   +   ++    +    S  +    E      YR  VG LMYA+ GTRPD+ +AV   ++ M++P R  +   KR+ RYL    +L +     +N   L G+ DAD     E R S +GYVF L+  AISW S+KQ +V  SSTEAEY+ +
Sbjct: 1116 PVSRLPSIRTILSLAARHDWELRQMDVKSAYLNGILEETVYMRLPPGFAPPEQSHLVCRLKKTLYGLKQAGRGWYKTLTAAMENMGFTRCVADHAVFYKRE--GESAIIVAASVDDLTITGTSDLVDAFAVDIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRFNLDEAAPLSIPLQPGSPLGNHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDITFAVTALSQFMQNPGRAHWDALKRVLRYLKGSRELWLVYG--TNNEGLRGYSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIAL 1444          
BLAST of mRNA_H-paniculata_contig6885.14808.1 vs. uniprot
Match: A0A409WVI7_9AGAR (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409WVI7_9AGAR)

HSP 1 Score: 184 bits (467), Expect = 1.260e-48
Identity = 126/338 (37.28%), Postives = 171/338 (50.59%), Query Frame = 1
Query:   16 PVPPQSTLRTIFSLAAKHHFELEGMDIDAAYLNAPVEEELFV--------------KLPAEFY-----------SFSRDIPFVRRLRLQRSTTGPCLYFSRDEGGETDILVAVCIDDLVNVGRCEK-VNEFKYSISQRFRMKDLGSLSRMLGIEVRRDGPNGTISISQGGYIREVLKRCGLDKCRGVPTSVKGIVKILALDSGRSGNSTE---------YRGMVGPLMYASTGTRPDMAYAVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITLAGK--SNGHSLEGFVDADRAEDVEDRKSTTGYVFKLNDSAISWCSRKQQLVTWSSTEAEYV 918
            PV    ++R I +LAAKH  EL+ MD+  AYLN  + E+L++              KL    Y           +F   +  +   RL   T   CLY  R EGG+   LV V +DDL+        ++E K  ++  F+M+DLG  S +LGI++RRD     I +SQ  YI  VLKRCG++ C+ V T +    ++ A D   +   TE         Y  +VG LMYA  GTRPD+AYA     R   +P R  +   KR+ RYL    DL +   G   S   S  G+ DAD + D E  KST+GYVF  +  AI W S++Q LV  SSTE+EYV
Sbjct: 1089 PVANLESIRIILALAAKHDLELDQMDVQTAYLNGKLTEDLYLLPPDGVDIPKGHCWKLKKSLYGLKQAGRTWNKTFDSSLKDLGFTRLDAET---CLYVMRGEGGKLCFLV-VYVDDLILAATSRAYMDEIKTKLAATFKMRDLGPASYVLGIQIRRDRRKRIIGLSQRQYIDTVLKRCGMEDCKPVFTPLSTQNRLTADDPINNDTLTEMTINNKTVSYATVVGSLMYAMMGTRPDIAYATGLLGRFSTNPKRCHWEAAKRVLRYLKGTRDLELQFDGNDVSMDMSFHGYSDADWSGDPETSKSTSGYVFLSSRGAIGWASKRQSLVALSSTESEYV 1422          
BLAST of mRNA_H-paniculata_contig6885.14808.1 vs. uniprot
Match: A0A2G8RW53_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RW53_9APHY)

HSP 1 Score: 184 bits (467), Expect = 1.340e-48
Identity = 121/334 (36.23%), Postives = 170/334 (50.90%), Query Frame = 1
Query:   16 PVPPQSTLRTIFSLAAKHHFELEGMDIDAAYLNAPVEEELFVKLPAEFYSFSRDIPFVRRLR-------------------------LQRSTTGPCLYFSRDEGGETDILVAVCIDDLVNVGRCEKVNEFKYSISQRFRMKDLGSLSRMLGIEVRRDGPNGTISISQGGYIREVLKRCGLDKCRGVPTSVKGIVKILALDSGRSGNSTE------YRGMVGPLMYASTGTRPDMAYAVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITLAGKSNGHSLEGFVDADRAEDVEDRKSTTGYVFKLNDSAISWCSRKQQLVTWSSTEAEYVVV 924
            PV    ++RTI +LAA+H +EL  MD+ +AYLN  +EE +++  P  F S       V RL+                           R      +++ R+  GE+ I+VA  +DDL   G  + VN F   I QRF M DLG+L  +LGIEVRRD    TI+ISQ  YI   + R  L+    +   ++    +    S  +    E      YR  VG LMYA+ GTRPD+ +AV   ++ M++P R  +   KR+ RYL    +L +     +NG  L  F DAD    +E R S +GYVF L+  AISW S+KQ +V  SSTEAEY+ +
Sbjct: 1899 PVSRLPSIRTILALAARHDWELRQMDVKSAYLNGTLEETVYMHQPPSF-SMPEQSHLVCRLKKTLYGLKQAGRGWYKTLTAAMLQMGFTRCVADHAVFYKRE--GESAIIVAASVDDLTIAGTSDLVNAFAADIKQRFEMSDLGNLHWILGIEVRRDCQARTIAISQRSYIDTTVSRFNLEDAAPLSIPLQPGSPLGQHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDVTFAVTALSQFMQNPGRAHWDAIKRVLRYLKGTRELWLVYGDDNNG--LHSFSDADWGSSMEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIAL 2227          
BLAST of mRNA_H-paniculata_contig6885.14808.1 vs. uniprot
Match: A0A7M6DPI8_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DPI8_9CNID)

HSP 1 Score: 182 bits (461), Expect = 7.670e-48
Identity = 108/336 (32.14%), Postives = 178/336 (52.98%), Query Frame = 1
Query:   16 PVPPQSTLRTIFSLAAKHHFELEGMDIDAAYLNAPVEEELFVKLPAEFYSFSRDIP--------------------------FVRRLRLQRSTTGPCLYFSRDEGGETD--ILVAVCIDDL-VNVGRCEKVNEFKYSISQRFRMKDLGSLSRMLGIEVRRDGPNGTISISQGGYIREVLKRCGLDKCRGVPTSVKGIVKILAL-DSGRSGNSTEYRGMVGPLMYASTGTRPDMAYAVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITLAGKSNGHSL-EGFVDADRAEDVEDRKSTTGYVFKLNDSAISWCSRKQQLVTWSSTEAEYVVVGE 930
            PV   +++R++ ++  +   EL  MD+  A+LN  +EE++F+K P  F   +RD P                          F++     R+   PC+Y  +   G+    ++VAV +DDL +     + + E K  + +RF M+D   +  +LG++V+RD  N  ++I Q  ++  VL R  +++C+ V T ++  +K   L D        +Y+  +G L YAS GTRPD++ AV   ++ M  P ++ +   KR+ RYL    D G+   G  +G  L  GF DAD A D++ RKST+GYVFK+ +S +SW S++Q +V  S TEAEYV + +
Sbjct:  862 PVAKYNSIRSVLAITNELDLELHQMDVKTAFLNGDLEEDIFMKQPEGF--INRDNPNMACKLQKSIYGLKQSARCWNEKMDEFLKESGFTRNDADPCIYHKQITKGDKSFTLIVAVYVDDLLIACNNIQILREQKQKLGERFEMEDKSEVHFILGMQVKRDRKNRRLTIDQNAFLSSVLNRFNMNECKPVATPLEPSMKFEKLADDEEIVKLKDYQSAIGCLTYASIGTRPDISAAVGVLSQHMSKPGKQHWIGVKRVLRYLKGTLDYGLIYEGSESGDILLHGFADADWAGDIDTRKSTSGYVFKVGNSTVSWKSKRQSIVALSKTEAEYVALSQ 1195          
BLAST of mRNA_H-paniculata_contig6885.14808.1 vs. uniprot
Match: A5BPU0_VITVI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5BPU0_VITVI)

HSP 1 Score: 179 bits (453), Expect = 7.760e-48
Identity = 111/336 (33.04%), Postives = 176/336 (52.38%), Query Frame = 1
Query:   16 PVPPQSTLRTIFSLAAKHHFELEGMDIDAAYLNAPVEEELFV----------------KLPAEFYS--------FSRDIPFVRRLRLQRSTTGPCLYFSRDEGGETDILVAVCIDDLVNVGR-CEKVNEFKYSISQRFRMKDLGSLSRMLGIEVRRDGPNGTISISQGGYIREVLKRCGLDKCRGVPTSVKGIVKILALDSGRSGNSTE------YRGMVGPLMYASTGTRPDMAYAVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITLAGKSNGHSLEGFVDADRAEDVEDRKSTTGYVFKLNDSAISWCSRKQQLVTWSSTEAEYVVVGE 930
            PV   ST+R +  + A  +  LE +D+  A+L+  +EE+L++                KL    Y         + +   F+ R+  +R     C YF   +     I++ + +DD++  G   EK+N  K  +S++F MKDLG+  ++LG+ + RD  NGT+ +SQ  Y+++VL R  +++ + V T +    K+    S ++    +      Y   +G LMYA   TRP++A+AV   +R M  P ++ +   K I RYL    D  +   G S    L+G+VDAD A D++ RKSTTG+VF L  +AISW S  Q++VT  +TEAEYV V E
Sbjct:  283 PVVKMSTIRLVLGMVAAENLHLEQLDVKTAFLHGDLEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEANHCCYFKSFDNSY--IILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLDSHFKLSKEQSPKTEEEKDHMSKVPYASAIGSLMYAMVCTRPNIAHAVGVVSRFMSRPGKQHWEVVKWILRYLKGSLDTCLCFTGASL--KLQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLFTTEAEYVAVTE 614          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6885.14808.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6S7JEY7_PARCT1.710e-5436.64Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9KES8_PARCT1.850e-5436.94Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A6G0X2D0_9STRA7.510e-5034.01Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A392MAT9_9FABA1.720e-4935.47Copia-type polyprotein (Fragment) n=1 Tax=Trifoliu... [more]
A0A5S6Q3I8_TRIMR2.420e-4933.54Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2G8RWY5_9APHY6.820e-4935.74Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]
A0A409WVI7_9AGAR1.260e-4837.28Integrase catalytic domain-containing protein (Fra... [more]
A0A2G8RW53_9APHY1.340e-4836.23Integrase catalytic domain-containing protein n=1 ... [more]
A0A7M6DPI8_9CNID7.670e-4832.14Uncharacterized protein n=1 Tax=Clytia hemisphaeri... [more]
A5BPU0_VITVI7.760e-4833.04Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6885contigH-paniculata_contig6885:8250..9332 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score176.4
Seed ortholog evalue2.1e-41
Seed eggNOG ortholog15368.BRADI2G31610.1
KEGG koko:K20093
Hectar predicted targeting categoryother localisation
EggNOG free text desc.gag-polypeptide of LTR copia-type
EggNOG OGs37THH@33090,3GG2K@35493,3IIIB@38820,3M5VU@4447,COG2801@1,KOG0017@2759
EC3.6.4.12
COG Functional cat.L
Best tax levelPoales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Exons3
Model size930
Cds size930
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6885.14808.1prot_H-paniculata_contig6885.14808.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig6885 8250..9332 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930824.3155024-CDS-H-paniculata_contig6885:8249..84481622930824.3155024-CDS-H-paniculata_contig6885:8249..8448Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6885 8250..8448 +
1691481468.909671-CDS-H-paniculata_contig6885:8249..84481691481468.909671-CDS-H-paniculata_contig6885:8249..8448Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6885 8250..8448 +
1622930824.336169-CDS-H-paniculata_contig6885:8523..88631622930824.336169-CDS-H-paniculata_contig6885:8523..8863Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6885 8524..8863 +
1691481468.9251273-CDS-H-paniculata_contig6885:8523..88631691481468.9251273-CDS-H-paniculata_contig6885:8523..8863Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6885 8524..8863 +
1622930824.3541172-CDS-H-paniculata_contig6885:8941..93321622930824.3541172-CDS-H-paniculata_contig6885:8941..9332Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6885 8942..9332 +
1691481468.936007-CDS-H-paniculata_contig6885:8941..93321691481468.936007-CDS-H-paniculata_contig6885:8941..9332Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6885 8942..9332 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig6885.14808.1

>prot_H-paniculata_contig6885.14808.1 ID=prot_H-paniculata_contig6885.14808.1|Name=mRNA_H-paniculata_contig6885.14808.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=310bp
MISLKPVPPQSTLRTIFSLAAKHHFELEGMDIDAAYLNAPVEEELFVKLP
AEFYSFSRDIPFVRRLRLQRSTTGPCLYFSRDEGGETDILVAVCIDDLVN
VGRCEKVNEFKYSISQRFRMKDLGSLSRMLGIEVRRDGPNGTISISQGGY
IREVLKRCGLDKCRGVPTSVKGIVKILALDSGRSGNSTEYRGMVGPLMYA
STGTRPDMAYAVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITLAGK
SNGHSLEGFVDADRAEDVEDRKSTTGYVFKLNDSAISWCSRKQQLVTWSS
TEAEYVVVGE
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mRNA from alignment at H-paniculata_contig6885:8250..9332+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig6885.14808.1 ID=mRNA_H-paniculata_contig6885.14808.1|Name=mRNA_H-paniculata_contig6885.14808.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1083bp|location=Sequence derived from alignment at H-paniculata_contig6885:8250..9332+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATTTCTTTGAAACCAGTGCCCCCGCAGTCAACATTGCGTACTATTTT CAGCCTGGCCGCCAAACATCATTTCGAACTAGAAGGCATGGACATAGACG CAGCGTATTTGAATGCCCCCGTAGAAGAAGAGCTGTTTGTTAAGCTACCC GCCGAGTTTTACTCTTTCTCCCGAGATATACCGTTTGTGCGCCGCCTGCG TAAGAGCCTGTATGGCCTCAAGCAGAGCGGCCGAAACTAGAATAACACTC TTGACGATTTTCTTGTTGGGATAGGACTTCAACGTTCGACTACTGGCCCG TGCTTGTACTTCTCTCGCGATGAAGGGGGAGAGACAGACATTCTCGTGGC CGTCTGTATTGACGACCTGGTCAATGTTGGACGTTGTGAGAAAGTAAACG AGTTCAAGTACAGCATAAGTCAGCGTTTCAGGATGAAAGACTTGGGATCC CTCTCGCGCATGTTGGGAATAGAAGTACGACGTGACGGCCCCAATGGTAC AATATCAATATCCCAAGGTGGCTACATCCGCGAGGTACTGAAAAGATGCG GTCTTGACAAGTGTCGAGGCGTGCCCACCTCTGTAAAGGGAATAGTGAAG ATTTTGGCACTCGAGTCGGCCGACAACCTCCTCGAGCCGAAACCACTTGG GGCTGTACTATCGGACATAGGCACAGTGGTACAATAAAGGAGCAGTGGGA GAAGTGGCAATTCAACTGAATATAGAGGCATGGTAGGACCACTCATGTAC GCCTCGACAGGAACCAGACCTGATATGGCATACGCGGTACACCAAGCAGC ACGTCGTATGGAGGACCCATGTCGGGAAGATTTCAGTACATGCAAGCGCA TTTTTCGGTATCTCAGTACTGTGCCTGATCTCGGCATCACGCTCGCCGGT AAGAGTAATGGTCACAGTCTGGAAGGATTCGTTGATGCCGATAGGGCGGA AGATGTCGAGGACCGAAAGTCCACAACAGGATACGTTTTCAAGCTAAACG ATAGTGCGATAAGTTGGTGCTCTAGGAAGCAACAGTTAGTCACGTGGTCC AGTACAGAGGCGGAGTACGTTGTTGTAGGAGAA
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Coding sequence (CDS) from alignment at H-paniculata_contig6885:8250..9332+

>mRNA_H-paniculata_contig6885.14808.1 ID=mRNA_H-paniculata_contig6885.14808.1|Name=mRNA_H-paniculata_contig6885.14808.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1860bp|location=Sequence derived from alignment at H-paniculata_contig6885:8250..9332+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATTTCTTTGAAACCAGTGCCCCCGCAGTCAACATTGCGTACTATTTT
CAGCCTGGCCGCCAAACATCATTTCGAACTAGAAGGCATGGACATAGACG
CAGCGTATTTGAATGCCCCCGTAGAAGAAGAGCTGTTTGTTAAGCTACCC
GCCGAGTTTTACTCTTTCTCCCGAGATATACCGTTTGTGCGCCGCCTGCA
TGATTTCTTTGAAACCAGTGCCCCCGCAGTCAACATTGCGTACTATTTTC
AGCCTGGCCGCCAAACATCATTTCGAACTAGAAGGCATGGACATAGACGC
AGCGTATTTGAATGCCCCCGTAGAAGAAGAGCTGTTTGTTAAGCTACCCG
CCGAGTTTTACTCTTTCTCCCGAGATATACCGTTTGTGCGCCGCCTGCGA
CTTCAACGTTCGACTACTGGCCCGTGCTTGTACTTCTCTCGCGATGAAGG
GGGAGAGACAGACATTCTCGTGGCCGTCTGTATTGACGACCTGGTCAATG
TTGGACGTTGTGAGAAAGTAAACGAGTTCAAGTACAGCATAAGTCAGCGT
TTCAGGATGAAAGACTTGGGATCCCTCTCGCGCATGTTGGGAATAGAAGT
ACGACGTGACGGCCCCAATGGTACAATATCAATATCCCAAGGTGGCTACA
TCCGCGAGGTACTGAAAAGATGCGGTCTTGACAAGTGTCGAGGCGTGCCC
ACCTCTGTAAAGGGAATAGTGAAGATTTTGGCACTCGAGACTTCAACGTT
CGACTACTGGCCCGTGCTTGTACTTCTCTCGCGATGAAGGGGGAGAGACA
GACATTCTCGTGGCCGTCTGTATTGACGACCTGGTCAATGTTGGACGTTG
TGAGAAAGTAAACGAGTTCAAGTACAGCATAAGTCAGCGTTTCAGGATGA
AAGACTTGGGATCCCTCTCGCGCATGTTGGGAATAGAAGTACGACGTGAC
GGCCCCAATGGTACAATATCAATATCCCAAGGTGGCTACATCCGCGAGGT
ACTGAAAAGATGCGGTCTTGACAAGTGTCGAGGCGTGCCCACCTCTGTAA
AGGGAATAGTGAAGATTTTGGCACTCGACAGTGGGAGAAGTGGCAATTCA
ACTGAATATAGAGGCATGGTAGGACCACTCATGTACGCCTCGACAGGAAC
CAGACCTGATATGGCATACGCGGTACACCAAGCAGCACGTCGTATGGAGG
ACCCATGTCGGGAAGATTTCAGTACATGCAAGCGCATTTTTCGGTATCTC
AGTACTGTGCCTGATCTCGGCATCACGCTCGCCGGTAAGAGTAATGGTCA
CAGTCTGGAAGGATTCGTTGATGCCGATAGGGCGGAAGATGTCGAGGACC
GAAAGTCCACAACAGGATACGTTTTCAAGCTAAACGATAGTGCGATAAGT
TGGTGCTCTAGGAAGCAACAGTTAGTCACGTGGTCCAGTACAGAGGCGGA
GTACGTTGTTGTAGGAGAACAGTGGGAGAAGTGGCAATTCAACTGAATAT
AGAGGCATGGTAGGACCACTCATGTACGCCTCGACAGGAACCAGACCTGA
TATGGCATACGCGGTACACCAAGCAGCACGTCGTATGGAGGACCCATGTC
GGGAAGATTTCAGTACATGCAAGCGCATTTTTCGGTATCTCAGTACTGTG
CCTGATCTCGGCATCACGCTCGCCGGTAAGAGTAATGGTCACAGTCTGGA
AGGATTCGTTGATGCCGATAGGGCGGAAGATGTCGAGGACCGAAAGTCCA
CAACAGGATACGTTTTCAAGCTAAACGATAGTGCGATAAGTTGGTGCTCT
AGGAAGCAACAGTTAGTCACGTGGTCCAGTACAGAGGCGGAGTACGTTGT
TGTAGGAGAA
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