mRNA_H-paniculata_contig6885.14808.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6885.14808.1 vs. uniprot
Match: A0A6S7JEY7_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JEY7_PARCT) HSP 1 Score: 197 bits (500), Expect = 1.710e-54 Identity = 122/333 (36.64%), Postives = 190/333 (57.06%), Query Frame = 1
Query: 7 SLKPVPPQSTLRTIFSLAAKHHFELEGMDIDAAYLNAPVEEELFVKLPAEFYSFSRDIPFVRRLR-----LQRS-------------------TTG-PCLYFSRDEGGETDILVAVCIDDLVNVGRCE-KVNEFKYSISQRFRMKDLGSLSRMLGIEVRRDGPNGTISISQGGYIREVLKRCGLDKCRGVPTSVKGIVKIL-ALDSGRSGNSTEYRGMVGPLMYASTGTRPDMAYAVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITLAGKSNGHSLEGFVDADRAEDVEDRKSTTGYVFKLNDSAISWCSRKQQLVTWSSTEAEYVVV 924
+ PV ++RT+ +LAA+H +L MD+ A+LN ++EE+++K P F ++ V RLR L++S TTG PC+Y ++EGGE ++AV +DD++ G+ + K+NE K +++++F+MKD+G LG++V + + I I Q Y + VL+R G++ + T V K+ A D + + Y+ VG L+Y ST TRPD+AYAV AR P E + KRI RYL+ D+G+ G S G+ DAD A D++DRKST+GYVF+++++AISW S+KQ V S+ EAEY+ +
Sbjct: 213 TFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQPEGFIDKGKE-HLVCRLRRSICGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQRHYFLGVKVIQKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSAHPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMTL 542
BLAST of mRNA_H-paniculata_contig6885.14808.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT) HSP 1 Score: 197 bits (502), Expect = 1.850e-54 Identity = 123/333 (36.94%), Postives = 190/333 (57.06%), Query Frame = 1
Query: 7 SLKPVPPQSTLRTIFSLAAKHHFELEGMDIDAAYLNAPVEEELFVKLPAEFYSFSRDIPFVRRLR-----LQRS-------------------TTG-PCLYFSRDEGGETDILVAVCIDDLVNVGRCE-KVNEFKYSISQRFRMKDLGSLSRMLGIEVRRDGPNGTISISQGGYIREVLKRCGLDKCRGVPTSVKGIVKIL-ALDSGRSGNSTEYRGMVGPLMYASTGTRPDMAYAVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITLAGKSNGHSLEGFVDADRAEDVEDRKSTTGYVFKLNDSAISWCSRKQQLVTWSSTEAEYVVV 924
+ PV ++RT+ +LAA+H +L MD+ A+LN ++EE+++K F ++ V RLR L++S TTG PC+Y ++EGGE ++AV +DD++ G+ + K+NE K +++++F+MKD+G L LG++V + I I Q Y + VL+R G++ + T V K+ A D + + Y+ VG L+Y ST TRPD+AYAV AR DP E + KRI RYL+ D+G+ G S G+ DAD A D++DRKST+GYVF+++++AISW S+KQ V S+ EAEY+ +
Sbjct: 65 TFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQTEGFIEKGKE-HLVCRLRRSIYGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIPKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMAL 394
BLAST of mRNA_H-paniculata_contig6885.14808.1 vs. uniprot
Match: A0A6G0X2D0_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X2D0_9STRA) HSP 1 Score: 180 bits (457), Expect = 7.510e-50 Identity = 117/344 (34.01%), Postives = 187/344 (54.36%), Query Frame = 1
Query: 16 PVPPQSTLRTIFSLAAKHHFELEGMDIDAAYLNAPVEEELFVKLPAEFYSFS-------------------RDIP---------FVRRLRLQRSTTGPCLYFSRDEGGETDILVAVCIDDLVNVGRCEKVNEF-KYSISQRFRMKDLGSLSRMLGIEVRRDGPNGTISISQGGYIREVLKRCGLDKCRGVPT---SVKGIVKILA-------LDSGRSGNSTEYRGMVGPLMYASTGTRPDMAYAVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITLAGKSNGHSLEGFVDADRAEDVEDRKSTTGYVFKLNDSAISWCSRKQQLVTWSSTEAEYVVVGE 930
PV +++R + S AAK++ +L+ MD++ A+LN+ ++E++++++P + + + P F+ +R+ +S C+Y R G +LV++ +DDL+ C K+ + K ++S+RF+M DLG+LS LGIEV R P+G++ I Q +++ VL + + C+ V T S + + K + D GR +YR VG LMY TRPD+A AV A++ +E+P + +S KRIFRYL D GI +G + + G+ DAD D R ST+GY F LN+ +SW SRKQ+ V SSTEAEY+ + E
Sbjct: 17 PVAKFTSIRVLLSTAAKYNLDLQQMDVNTAFLNSDLDEDIYMQVPDDLDVKATQGQTSKLVLKLKKSLCGLKQAPRLWNETIDGFMLSIRIAKSNADHCIYVMRT--GSRVVLVSLYVDDLILASNCNKMMQATKEALSKRFKMTDLGALSYCLGIEVMRS-PSGSVFIHQSKFLKSVLVKFNMQGCKPVKTPQESGQRLSKYMCPTTDEEKTDMGR----IQYRSAVGCLMYLMVTTRPDIAVAVGVASQFLENPGQRHWSAVKRIFRYLKGTEDFGIKYSGSQD---VCGYTDADWVGDANTRHSTSGYCFMLNNGLVSWKSRKQRTVALSSTEAEYMGLSE 350
BLAST of mRNA_H-paniculata_contig6885.14808.1 vs. uniprot
Match: A0A392MAT9_9FABA (Copia-type polyprotein (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392MAT9_9FABA) HSP 1 Score: 181 bits (460), Expect = 1.720e-49 Identity = 116/327 (35.47%), Postives = 181/327 (55.35%), Query Frame = 1
Query: 16 PVPPQSTLRTIFSLAAKHHFELEGMDIDAAYLNAPVEEELFVKLPAEFYSFSRDIPFVRRLRLQRSTTGPCLYFSRDE---------------------GGETDILV-AVCIDDLVNVGRCEKV-NEFKYSISQRFRMKDLGSLSRMLGIEVRRDGPNGTISISQGGYIREVLKRCGLDKCRGVPTSVKGIVKILALDSGRSGNSTEYRGMVGPLMYASTGTRPDMAYAVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITLAGKSN-GHSLEGFVDADRAEDVEDRKSTTGYVFKLNDSAISWCSRKQQLVTWSSTEAEYVVV 924
PV T+R I + AA + ++ +D+ +A+L+ + E+++V P + S ++++ + + L P ++S+ E GG+ +ILV ++ +DDL+ G +++ NEFK S+ ++F M DLG + LG+EV + G NG I ++Q Y E+L R G++ C V + + K++ ++ ++T Y+ MVG LMY TRPD+AY+V AR M+ P + KRI RYL GI S L+G+ D+D A D++DRKSTTGYVF L AISW S+KQ +VT S+TEAEYV V
Sbjct: 104 PVARWDTIRAILAFAANNGLKIFQLDVKSAFLHGELTEDIYVSQPLGYVSKNKNMVYKLKKALYGLKQAPRAWYSKIESYFTAEKFEKCPYEHTLFVKYGGKNEILVVSLYVDDLIYTGNDQRLMNEFKSSMKKQFAMTDLGKMRYFLGVEVNQ-GHNG-IFMTQQKYATEILSRFGMENCNQVSSPIVPGCKLVKNENEEGTDATLYKQMVGCLMYL-LATRPDLAYSVCLVARFMDRPTEAHVTAVKRIMRYLKGTLSFGIMYKSSSRIDMCLKGWCDSDYAGDLDDRKSTTGYVFMLGSGAISWSSKKQLIVTLSTTEAEYVSV 427
BLAST of mRNA_H-paniculata_contig6885.14808.1 vs. uniprot
Match: A0A5S6Q3I8_TRIMR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6Q3I8_TRIMR) HSP 1 Score: 181 bits (460), Expect = 2.420e-49 Identity = 110/328 (33.54%), Postives = 181/328 (55.18%), Query Frame = 1
Query: 16 PVPPQSTLRTIFSLAAKHHFELEGMDIDAAYLNAPVEEELFVKLPAEFYSFSRD--IPFVRR----------------------LRLQRSTTGPCLYFSRDEGGETDILVAVCIDDLVNVGRCEKVN-EFKYSISQRFRMKDLGSLSRMLGIEVRRDGPNGTISISQGGYIREVLKRCGLDKCRGVPTSVKGIVKILALDSGRSGNSTEYRGMVGPLMYASTGTRPDMAYAVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITLAGKSNGHSLEGFVDADRAEDVEDRKSTTGYVFKLNDSAISWCSRKQQLVTWSSTEAEYVVV 924
PV T+R + SLAA + +D+ AAYLN+P+EEEL+VK P F ++ + +R+ L +++ CL+ +++ G ++ + +DDL+ VG K+ E + + F+ KDLG + LGI++ R+G +G+I + Q I ++L++ GL +C+ PT ++ + +S ++T+YR +G L+Y +T +RPD+A V R +E P D+ KR+ RYL+ + + L+ + G L+ +VDAD A D DRKSTTG+VF+L + ++W SRKQ +V SSTEAEY+ V
Sbjct: 114 PVVKHDTVRVLLSLAAAQKLHVRHLDVKAAYLNSPLEEELYVKQPPGFEVQGQEHKVLLLRKSLYGLKQSARAWNKMATDTLTSLGFEQAMADHCLFSKKEKNGSRTYIL-IYVDDLLVVGATPKITKEVGIQMDKFFQTKDLGEVKNYLGIQIEREG-DGSILLHQRNKIEQLLEQYGLMECKPAPTPMETGFLSVNQESPPMPDNTKYRQAIGSLLYVATVSRPDIAAPVGFLCRHVEKPTEADWKAVKRVMRYLAATKYMTLRLSS-AGGIDLQCYVDADWAGDKADRKSTTGFVFQLGKNTVAWSSRKQSVVALSSTEAEYLAV 438
BLAST of mRNA_H-paniculata_contig6885.14808.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY) HSP 1 Score: 185 bits (469), Expect = 6.820e-49 Identity = 119/333 (35.74%), Postives = 171/333 (51.35%), Query Frame = 1
Query: 16 PVPPQSTLRTIFSLAAKHHFELEGMDIDAAYLNAPVEEELFVKLPAEF----------------YSFSRD--------IPFVRRLRLQRSTTGPCLYFSRDEGGETDILVAVCIDDLVNVGRCEKVNEFKYSISQRFRMKDLGSLSRMLGIEVRRDGPNGTISISQGGYIREVLKRCGLDKCRGVPTSVKGIVKILALDSGRSGNSTE------YRGMVGPLMYASTGTRPDMAYAVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITLAGKSNGHSLEGFVDADRAEDVEDRKSTTGYVFKLNDSAISWCSRKQQLVTWSSTEAEYVVV 924
PV ++RTI SLAA+H +EL MD+ +AYLN +EE ++++LP F Y + + + R +++ R+ GE+ I+VA +DDL G + V+ F I QRF M DLG L +LGIEVRRD TI+ISQ YI ++ R LD+ + ++ + S + E YR VG LMYA+ GTRPD+ +AV ++ M++P R + KR+ RYL +L + +N L G+ DAD E R S +GYVF L+ AISW S+KQ +V SSTEAEY+ +
Sbjct: 1116 PVSRLPSIRTILSLAARHDWELRQMDVKSAYLNGILEETVYMRLPPGFAPPEQSHLVCRLKKTLYGLKQAGRGWYKTLTAAMENMGFTRCVADHAVFYKRE--GESAIIVAASVDDLTITGTSDLVDAFAVDIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRFNLDEAAPLSIPLQPGSPLGNHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDITFAVTALSQFMQNPGRAHWDALKRVLRYLKGSRELWLVYG--TNNEGLRGYSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIAL 1444
BLAST of mRNA_H-paniculata_contig6885.14808.1 vs. uniprot
Match: A0A409WVI7_9AGAR (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409WVI7_9AGAR) HSP 1 Score: 184 bits (467), Expect = 1.260e-48 Identity = 126/338 (37.28%), Postives = 171/338 (50.59%), Query Frame = 1
Query: 16 PVPPQSTLRTIFSLAAKHHFELEGMDIDAAYLNAPVEEELFV--------------KLPAEFY-----------SFSRDIPFVRRLRLQRSTTGPCLYFSRDEGGETDILVAVCIDDLVNVGRCEK-VNEFKYSISQRFRMKDLGSLSRMLGIEVRRDGPNGTISISQGGYIREVLKRCGLDKCRGVPTSVKGIVKILALDSGRSGNSTE---------YRGMVGPLMYASTGTRPDMAYAVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITLAGK--SNGHSLEGFVDADRAEDVEDRKSTTGYVFKLNDSAISWCSRKQQLVTWSSTEAEYV 918
PV ++R I +LAAKH EL+ MD+ AYLN + E+L++ KL Y +F + + RL T CLY R EGG+ LV V +DDL+ ++E K ++ F+M+DLG S +LGI++RRD I +SQ YI VLKRCG++ C+ V T + ++ A D + TE Y +VG LMYA GTRPD+AYA R +P R + KR+ RYL DL + G S S G+ DAD + D E KST+GYVF + AI W S++Q LV SSTE+EYV
Sbjct: 1089 PVANLESIRIILALAAKHDLELDQMDVQTAYLNGKLTEDLYLLPPDGVDIPKGHCWKLKKSLYGLKQAGRTWNKTFDSSLKDLGFTRLDAET---CLYVMRGEGGKLCFLV-VYVDDLILAATSRAYMDEIKTKLAATFKMRDLGPASYVLGIQIRRDRRKRIIGLSQRQYIDTVLKRCGMEDCKPVFTPLSTQNRLTADDPINNDTLTEMTINNKTVSYATVVGSLMYAMMGTRPDIAYATGLLGRFSTNPKRCHWEAAKRVLRYLKGTRDLELQFDGNDVSMDMSFHGYSDADWSGDPETSKSTSGYVFLSSRGAIGWASKRQSLVALSSTESEYV 1422
BLAST of mRNA_H-paniculata_contig6885.14808.1 vs. uniprot
Match: A0A2G8RW53_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RW53_9APHY) HSP 1 Score: 184 bits (467), Expect = 1.340e-48 Identity = 121/334 (36.23%), Postives = 170/334 (50.90%), Query Frame = 1
Query: 16 PVPPQSTLRTIFSLAAKHHFELEGMDIDAAYLNAPVEEELFVKLPAEFYSFSRDIPFVRRLR-------------------------LQRSTTGPCLYFSRDEGGETDILVAVCIDDLVNVGRCEKVNEFKYSISQRFRMKDLGSLSRMLGIEVRRDGPNGTISISQGGYIREVLKRCGLDKCRGVPTSVKGIVKILALDSGRSGNSTE------YRGMVGPLMYASTGTRPDMAYAVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITLAGKSNGHSLEGFVDADRAEDVEDRKSTTGYVFKLNDSAISWCSRKQQLVTWSSTEAEYVVV 924
PV ++RTI +LAA+H +EL MD+ +AYLN +EE +++ P F S V RL+ R +++ R+ GE+ I+VA +DDL G + VN F I QRF M DLG+L +LGIEVRRD TI+ISQ YI + R L+ + ++ + S + E YR VG LMYA+ GTRPD+ +AV ++ M++P R + KR+ RYL +L + +NG L F DAD +E R S +GYVF L+ AISW S+KQ +V SSTEAEY+ +
Sbjct: 1899 PVSRLPSIRTILALAARHDWELRQMDVKSAYLNGTLEETVYMHQPPSF-SMPEQSHLVCRLKKTLYGLKQAGRGWYKTLTAAMLQMGFTRCVADHAVFYKRE--GESAIIVAASVDDLTIAGTSDLVNAFAADIKQRFEMSDLGNLHWILGIEVRRDCQARTIAISQRSYIDTTVSRFNLEDAAPLSIPLQPGSPLGQHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDVTFAVTALSQFMQNPGRAHWDAIKRVLRYLKGTRELWLVYGDDNNG--LHSFSDADWGSSMEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIAL 2227
BLAST of mRNA_H-paniculata_contig6885.14808.1 vs. uniprot
Match: A0A7M6DPI8_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DPI8_9CNID) HSP 1 Score: 182 bits (461), Expect = 7.670e-48 Identity = 108/336 (32.14%), Postives = 178/336 (52.98%), Query Frame = 1
Query: 16 PVPPQSTLRTIFSLAAKHHFELEGMDIDAAYLNAPVEEELFVKLPAEFYSFSRDIP--------------------------FVRRLRLQRSTTGPCLYFSRDEGGETD--ILVAVCIDDL-VNVGRCEKVNEFKYSISQRFRMKDLGSLSRMLGIEVRRDGPNGTISISQGGYIREVLKRCGLDKCRGVPTSVKGIVKILAL-DSGRSGNSTEYRGMVGPLMYASTGTRPDMAYAVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITLAGKSNGHSL-EGFVDADRAEDVEDRKSTTGYVFKLNDSAISWCSRKQQLVTWSSTEAEYVVVGE 930
PV +++R++ ++ + EL MD+ A+LN +EE++F+K P F +RD P F++ R+ PC+Y + G+ ++VAV +DDL + + + E K + +RF M+D + +LG++V+RD N ++I Q ++ VL R +++C+ V T ++ +K L D +Y+ +G L YAS GTRPD++ AV ++ M P ++ + KR+ RYL D G+ G +G L GF DAD A D++ RKST+GYVFK+ +S +SW S++Q +V S TEAEYV + +
Sbjct: 862 PVAKYNSIRSVLAITNELDLELHQMDVKTAFLNGDLEEDIFMKQPEGF--INRDNPNMACKLQKSIYGLKQSARCWNEKMDEFLKESGFTRNDADPCIYHKQITKGDKSFTLIVAVYVDDLLIACNNIQILREQKQKLGERFEMEDKSEVHFILGMQVKRDRKNRRLTIDQNAFLSSVLNRFNMNECKPVATPLEPSMKFEKLADDEEIVKLKDYQSAIGCLTYASIGTRPDISAAVGVLSQHMSKPGKQHWIGVKRVLRYLKGTLDYGLIYEGSESGDILLHGFADADWAGDIDTRKSTSGYVFKVGNSTVSWKSKRQSIVALSKTEAEYVALSQ 1195
BLAST of mRNA_H-paniculata_contig6885.14808.1 vs. uniprot
Match: A5BPU0_VITVI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5BPU0_VITVI) HSP 1 Score: 179 bits (453), Expect = 7.760e-48 Identity = 111/336 (33.04%), Postives = 176/336 (52.38%), Query Frame = 1
Query: 16 PVPPQSTLRTIFSLAAKHHFELEGMDIDAAYLNAPVEEELFV----------------KLPAEFYS--------FSRDIPFVRRLRLQRSTTGPCLYFSRDEGGETDILVAVCIDDLVNVGR-CEKVNEFKYSISQRFRMKDLGSLSRMLGIEVRRDGPNGTISISQGGYIREVLKRCGLDKCRGVPTSVKGIVKILALDSGRSGNSTE------YRGMVGPLMYASTGTRPDMAYAVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITLAGKSNGHSLEGFVDADRAEDVEDRKSTTGYVFKLNDSAISWCSRKQQLVTWSSTEAEYVVVGE 930
PV ST+R + + A + LE +D+ A+L+ +EE+L++ KL Y + + F+ R+ +R C YF + I++ + +DD++ G EK+N K +S++F MKDLG+ ++LG+ + RD NGT+ +SQ Y+++VL R +++ + V T + K+ S ++ + Y +G LMYA TRP++A+AV +R M P ++ + K I RYL D + G S L+G+VDAD A D++ RKSTTG+VF L +AISW S Q++VT +TEAEYV V E
Sbjct: 283 PVVKMSTIRLVLGMVAAENLHLEQLDVKTAFLHGDLEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEANHCCYFKSFDNSY--IILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLDSHFKLSKEQSPKTEEEKDHMSKVPYASAIGSLMYAMVCTRPNIAHAVGVVSRFMSRPGKQHWEVVKWILRYLKGSLDTCLCFTGASL--KLQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLFTTEAEYVAVTE 614 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6885.14808.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6885.14808.1 >prot_H-paniculata_contig6885.14808.1 ID=prot_H-paniculata_contig6885.14808.1|Name=mRNA_H-paniculata_contig6885.14808.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=310bp MISLKPVPPQSTLRTIFSLAAKHHFELEGMDIDAAYLNAPVEEELFVKLPback to top mRNA from alignment at H-paniculata_contig6885:8250..9332+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6885.14808.1 ID=mRNA_H-paniculata_contig6885.14808.1|Name=mRNA_H-paniculata_contig6885.14808.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1083bp|location=Sequence derived from alignment at H-paniculata_contig6885:8250..9332+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6885:8250..9332+ >mRNA_H-paniculata_contig6885.14808.1 ID=mRNA_H-paniculata_contig6885.14808.1|Name=mRNA_H-paniculata_contig6885.14808.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1860bp|location=Sequence derived from alignment at H-paniculata_contig6885:8250..9332+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |