mRNA_H-paniculata_contig6863.14780.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6863.14780.1 vs. uniprot
Match: D7G2C7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C7_ECTSI) HSP 1 Score: 400 bits (1028), Expect = 1.670e-121 Identity = 232/290 (80.00%), Postives = 247/290 (85.17%), Query Frame = 1
Query: 1 GGLTVLGGGFLTVLSVLGSSIAHVNPTFVFDEMIVTHYCGGLRGLVSLVLAALTQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVVQFFHKTSAEMTGSADTIGAGAKVLMKGLVGGTFGSAAKITGSLEGLIRGLSGTAILENDLYPGETGDGDDYRGDHGEVHVLEHGMKQGGKVFYESMRVGISGLVDRPMEGAKDEGFAGFIAGMAKGIXXXXXXXXXXXLGAVSRAAEGVDASTRLSDEKRMGRRRAARTFVASSYSTGRALTPVTPTDLVKHVPRKFATLWAGT 870
GGLTVLGGGFLTVLSVLGSSIAHVNPTFVFDE++VTHYCG GL LV+ ALTQQAVAQGYKVVGSMELLGDPLSLV KLGDSVVQFF KT AEMTG ADT+GAGAKVL+KGLVGGTFGSAAKITGSLEG+IRGLSGTAI EN+ DG R EV LEHG+KQGGKVFYE+M+ GI+GL+DRP EGAK+EG AGFIAGMAKG XXXXXXXXXXX AVSR EGVDASTRLSDEKRMGRRRAART S TGRAL P+TPTDLVK+VPRKFATLW GT
Sbjct: 1098 GGLTVLGGGFLTVLSVLGSSIAHVNPTFVFDELVVTHYCGSAGGLTGLVVTALTQQAVAQGYKVVGSMELLGDPLSLVGKLGDSVVQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREEDGQLQR----EVKGLEHGVKQGGKVFYETMKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXAVSRVTEGVDASTRLSDEKRMGRRRAARTAFRS-VPTGRALPPLTPTDLVKNVPRKFATLWVGT 1382
BLAST of mRNA_H-paniculata_contig6863.14780.1 vs. uniprot
Match: A0A6H5KWU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWU7_9PHAE) HSP 1 Score: 377 bits (967), Expect = 2.230e-111 Identity = 226/317 (71.29%), Postives = 244/317 (76.97%), Query Frame = 1
Query: 1 GGLTVLGGGFLTVLSVLGS---------------------------SIAHVNPTFVFDEMIVTHYCGGLRGLVSLVLAALTQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVVQFFHKTSAEMTGSADTIGAGAKVLMKGLVGGTFGSAAKITGSLEGLIRGLSGTAILENDLYPGETGDGDDYRGDHGEVHVLEHGMKQGGKVFYESMRVGISGLVDRPMEGAKDEGFAGFIAGMAKGIXXXXXXXXXXXLGAVSRAAEGVDASTRLSDEKRMGRRRAARTFVASSYSTGRALTPVTPTDLVKHVPRKFATLWAGT 870
GGLTVLGGGFLTVLSVLGS SIAHVNPTFVFDE++VTHYCG GL LV+ ALTQQAVAQGYKVVGSMELLGDPLSLV KLGDSVVQFF KT AEMTG ADT+GAGAK+L+KGLVGGTFGSAAKITGSLEG+IRGLSGTAI EN+ DG R EV LE G+KQGGK+FYE+M+ GI+GL+DRP EGAK+EG AGFIAGMAKG XXXXXXXXXXX VSR EGVDASTRLSDEKRMGRRRAART S TGRAL P+TP DLVK++PRKFATLW GT
Sbjct: 2732 GGLTVLGGGFLTVLSVLGSRRVPCSLIVIALACRCSWVTILWAETLSIAHVNPTFVFDELVVTHYCGSAGGLTGLVVTALTQQAVAQGYKVVGSMELLGDPLSLVGKLGDSVVQFFTKTKAEMTGDADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQR----EVKDLEQGVKQGGKIFYETMKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXXVSRVTEGVDASTRLSDEKRMGRRRAARTAFRS-VPTGRALPPLTPIDLVKNIPRKFATLWVGT 3043
BLAST of mRNA_H-paniculata_contig6863.14780.1 vs. uniprot
Match: A0A835YJU6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU6_9STRA) HSP 1 Score: 239 bits (611), Expect = 6.470e-67 Identity = 146/289 (50.52%), Postives = 178/289 (61.59%), Query Frame = 1
Query: 1 GGLTVLGGGFLTVLSVLGSSIAHVNPTFVFDEMIVTHYCGGLRGLVSLVLAALTQQAVAQGYK---------------------------VVGSMELLGDPLSLVSKLGDSVVQFFHKTSAEMTGSADTIGAGAKVLMKGLVGGTFGSAAKITGSLEGLIRGLSGTAILENDLYPGETGDGDDYRGDHGEVHVLEHGMKQGGK--------VFYESMRVGISGLVDRPMEGAKDEGFAGFIAGMAKGIXXXXXXXXXXXLGAVSRAAEGVDASTRLSDEKRMGRRRAAR 762
GGL VLGG FL+ + VLG ++A ++PTFVFDE++VTHY G R L + + L QQ VAQGYK VVGSMELLGDPL+LV+KL DSV+QF T AE G T GAGA++L+ G+VGG FGSAAKI GSLE +IRGLSGT + + + G GD V L+HG ++GG+ V Y+S++ GISGLVDRPMEGAK+EG AGF+ GMAKGI LGAVS+ EGVDASTR +RMGRRR R
Sbjct: 296 GGLAVLGGSFLSAVGVLGGTLARISPTFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLSGTEVADAE------GGGDT------RVRHLKHGFQRGGQXXXXXXXXVLYDSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTRYRQLERMGRRREPR 572
BLAST of mRNA_H-paniculata_contig6863.14780.1 vs. uniprot
Match: A0A7S2GN42_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GN42_9STRA) HSP 1 Score: 182 bits (461), Expect = 6.100e-47 Identity = 115/279 (41.22%), Postives = 161/279 (57.71%), Query Frame = 1
Query: 4 GLTVLGGGFLTVLSVLGSSIAHVNPTFVFDEMIVTHYCGGLRGLVSLVLAALTQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVVQFFHKTSAEMTGSADTIGAGAKVLMKGLVGGTFGSAAKITGSLEGLIRGLSGTAILENDLYPGETGDGDDYRGDHGEVHVLEHGMKQGGKVFYESMRVGISGLVDRPMEGAKDEGFAGFIAGMAKGIXXXXXXXXXXXLGAVSRAAEGVDASTRLSDEKRMGRRRAARTFVASSYSTGRALTPVTPTDLVKHVP 840
G+ ++G ++L VLGSS+AH+NPTF F+E+ + G L S + +L +Q VAQGYKVVGSMELLGDP+SLVS +G V QFF KT A+M G ++T G G K L +G+VGGTFGS AKITG+ + L+ ++G +N P G G+ G + + + GI+G+V RP+EGA+ G GF+ G+ KG+ GAVS E VDA+ + DE+ MGRRR R+ TG L P+T + L +++P
Sbjct: 251 GVWLMGSSLWSMLVVLGSSLAHINPTFQFNELKLADSFGQRWDLASSIFMSLVKQGVAQGYKVVGSMELLGDPVSLVSNMGVGVYQFFRKTGADMLGESETRGEGVKHLFQGVVGGTFGSVAKITGAADTLLSAVTGQNERDNWQRPEHVG----------------QGIVIGSERVWRGVTEGITGIVVRPIEGAQQNGVPGFLFGLGKGVVGAVAAPVAGAFGAVSAVTESVDANLKYWDERPMGRRRNTRS------GTG-LLQPLTVSHLNENIP 506
BLAST of mRNA_H-paniculata_contig6863.14780.1 vs. uniprot
Match: W7U3K2_9STRA (Ph domain containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3K2_9STRA) HSP 1 Score: 149 bits (377), Expect = 5.030e-34 Identity = 98/278 (35.25%), Postives = 153/278 (55.04%), Query Frame = 1
Query: 4 GLTVLGGGFLTVLSVLGSSIAHVNP-TFVFDEMIVTHYCGGLRGLVSLVLAALTQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVVQFFHKTSAEMTGSADTIGAGAKVLMKGLVGGTFGSAAKITGSLEGLIRGLSGT----AILENDLYPG-----------ETGDG----DDYRGDHGEVHVLEHGMKQGGKVFYESMRVGISGLVDRPMEGAKDEGFAGFIAGMAKGIXXXXXXXXXXXLGAVSRAAEGVDASTRLSDEKRMGRRRAARTFVAS 777
GL ++G G + +L+ + S+A ++ T VF+E++ THY G L +V+ +L QQA+ Q YK++G+M+LLG+PL+L G VV+FF +T AE+ G AD+ G G + L K ++GG F S +KITG++ L+ + G A+ E + +T DG D +RG L G+ +GG+VFY+S++ G+ + D P +GA EGF+GF+ GM KG+ LG +SR D + + + RRRA R + S
Sbjct: 3962 GLELIGTGVVQLLADMARSLAQLSGLTLVFNELLFTHYFGSHYDLGHIVVLSLRQQAITQSYKLLGAMDLLGNPLNLFLGFGSGVVEFFRRTQAELVGDADSKGEGLRRLAKAVIGGPFSSVSKITGTVASLLEEVVGVREMAAMAEEGMRDELSSSTARAIGHQTEDGGSSADGWRGRAPPPQHLGEGILKGGEVFYKSVKSGVKNIYDLPQQGASREGFSGFLKGMGKGVVGALAAPLIGTLGGISRV---TDTTAYFEKPRILRRRRAVRVALES 4236
BLAST of mRNA_H-paniculata_contig6863.14780.1 vs. uniprot
Match: D8LB75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB75_ECTSI) HSP 1 Score: 138 bits (348), Expect = 2.140e-30 Identity = 92/257 (35.80%), Postives = 137/257 (53.31%), Query Frame = 1
Query: 7 LTVLGGGFLTVLSVLGSSIAHVNPTFVFDEMIVTHYCGGLRGLVSLVLAALTQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVVQFFHKTSAEMTGSADTIGAGAKVLMKGLVGGTFGSAAKITGSLEGLIR-----GLSGTAILENDLYPGETGDGDDYRGDHGEVHVLEHGMKQGGKVFYESMRVGISGLVDRPMEGAKDEGFAGFIAGMAKGIXXXXXXXXXXXLGAVSRAAEGVDASTRLSDEKRMGRRRAAR 762
L +GG +LS G+ IA+ +PTF FD + HY G V+LV+ + +Q V Q YKV+G +++LGDPLSL + V+ F KT A IG G+K L+KG+VGGT SA+K+T +L+ +R + +E+ P G G+ QG F +++ GI+G+V +P+ GA+ G AGF+ G+ +G+ LGA S+ G+DA+TRL D++ MGRRR R
Sbjct: 2612 LGAVGGVVWGLLSSFGAGIANASPTFNFDAYELEHYYGSKTQAVTLVVMSFVKQGVVQAYKVLGHIDILGDPLSLGMNISSGVIGFVTKTGA------GHIGEGSKDLVKGVVGGTASSASKMTDALDNFVREAGCMDAEAPSGMESTKAPEHLG----------------QGLTQGMMYFGHTVKDGITGVVMKPVRGARKNGAAGFVKGVGQGVVGLVAAPVSAALGATSKITAGIDATTRLLDDEPMGRRREPR 2846
BLAST of mRNA_H-paniculata_contig6863.14780.1 vs. uniprot
Match: A0A6H5KB17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB17_9PHAE) HSP 1 Score: 119 bits (297), Expect = 4.300e-24 Identity = 97/257 (37.74%), Postives = 138/257 (53.70%), Query Frame = 1
Query: 7 LTVLGGGFLTVLSVLGSSIAHVNPTFVFDEMIVTHYCGGLRGLVSLVLAALTQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVVQFFHKTSAEMTGSADTIGAGAKVLMKGLVGGTFGSAAKITGSLEGLIR-----GLSGTAILENDLYPGETGDGDDYRGDHGEVHVLEHGMKQGGKVFYESMRVGISGLVDRPMEGAKDEGFAGFIAGMAKGIXXXXXXXXXXXLGAVSRAAEGVDASTRLSDEKRMGRRRAAR 762
L +GG +LS G+ IA+ +PTF FD + HY G V+ V+ + +Q V Q YKV+G +++LGDPLSL + V+ F KT A IG G+K L+KG+VGGT SA+K+T +L+ +R + +E+ P G G+ QG F +++ GI+G+V +P+ GA+ G AGF+ XXXXXXXXXXX S+ G+DA+TRL D+ MGRRR R
Sbjct: 1516 LGAVGGVVWGLLSSFGAGIANASPTFNFDAYELEHYYGSKTQAVTQVVMSFVKQGVVQAYKVLGHIDILGDPLSLGMNISSGVIGFVTKTGA------GHIGEGSKDLVKGVVGGTASSASKMTDALDNFVREAGCMDAEAPSGMESKKAPEHLG----------------QGLTQGMMYFGHTVKDGITGVVMKPVRGARKGGAAGFVKXXXXXXXXXXXXXXXXXXXXXSKITAGIDATTRLLDDDPMGRRREPR 1750
BLAST of mRNA_H-paniculata_contig6863.14780.1 vs. uniprot
Match: A0A484EGV5_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EGV5_BRELC) HSP 1 Score: 107 bits (266), Expect = 3.000e-20 Identity = 71/213 (33.33%), Postives = 112/213 (52.58%), Query Frame = 1
Query: 1 GGLTVLGGGFLTVLSVLGSSIAHVNPTFVFDEMIVTHYCGGLRGLVSLVLAALTQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVVQFFHKTSAEMTGSADTIGAGAKVLMKGLVGGTFGSAAKITGSLEGLIRGLSGTAILENDLYPGETGDGDDYRGDHGEVHVLEHGMKQGGKVFYESMRVGISGLVDRPMEGAKDEGFAGFIAGMAKGI 639
GG +++ GG ++ ++GS+++ +PTF F E+++ + L S ++A QQ V Q Y+++GS +++G+P+ LV LG VV+F T E+TG A T G G KVL K +V + S AKITGSL D + GE D + D G + G+K F + + G +G+ +P+EGA G G + G +GI
Sbjct: 2287 GGHSIVFGGLSQIIGLIGSNLSG-SPTFSFSEIVIVRCFTTKQRLQSQLVANYVQQGVLQAYRLIGSADIIGNPIGLVEDLGSGVVEFLKITKGEITGDAQTRGEGVKVLGKTIVKSSASSVAKITGSL---------------DKFVGEFADENRQNDDDGSMSTDNAGIK-----FAKDLGRGFTGIFTKPVEGAMKGGVTGLVQGTVQGI 2478
BLAST of mRNA_H-paniculata_contig6863.14780.1 vs. uniprot
Match: A0A485KYR2_9STRA (Aste57867_13032 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KYR2_9STRA) HSP 1 Score: 106 bits (265), Expect = 3.970e-20 Identity = 82/248 (33.06%), Postives = 122/248 (49.19%), Query Frame = 1
Query: 34 TVLSVLGSSIAHVNPTFVFDEMI----VTHYCGGLRGLVSLVLAALTQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVVQFFHKTSAEMTGSADTIGAGAKVLMKGLVGGTFGSAAKITGSLEGLIRGLSGTAILENDLYPGETGDGDDYRGDHGEVHVLEHGMKQGGKVFYESMRVGISGLVDRPMEGAKDEGFAGFIAGMAKGIXXXXXXXXXXXLGAVSRAAEGVDASTRLSDEKRM-GRRRAAR 762
T S++G IAH+ P+F + +Y LR V + ++ ++Q YKVVGS+ELLGDP+ LV ++ D +T + TG + + G GA LMK ++G G+ K++ + L++ + E + P H E G+ QGG VF S+ G+SGLV +PMEGAK GF GF G+ +G +G V + ++ V +T L DEK G RR AR
Sbjct: 2365 TAGSIVGG-IAHIQPSFFIQSISREDRFLYYDDFLRNTV--IWESIVMGCISQWYKVVGSVELLGDPVGLVHEITDGFALAVRQTKRDFTGKSRSKGQGAVTLMKTVIGAPSGAIGKMSNGVGDLLKKATHFDSQEMENEP---------------RHFPE-GVLQGGMVFGMSLAHGVSGLVTKPMEGAKQNGFGGFAKGVGQGALGLVASPFVGAIGVVEKLSQSVHNTTHLMDEKYFEGTRRIAR 2593
BLAST of mRNA_H-paniculata_contig6863.14780.1 vs. uniprot
Match: T0PMD4_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PMD4_SAPDV) HSP 1 Score: 103 bits (258), Expect = 2.830e-19 Identity = 79/246 (32.11%), Postives = 120/246 (48.78%), Query Frame = 1
Query: 34 TVLSVLGSSIAHVNPTFVFDEMIVTHYCGGLRGLVSLVLA--ALTQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVVQFFHKTSAEMTGSADTIGAGAKVLMKGLVGGTFGSAAKITGSLEGLIRGLSGTAILENDLYPGETGDGDDYRGDHGEVHVLEHGMKQGGKVFYESMRVGISGLVDRPMEGAKDEGFAGFIAGMAKGIXXXXXXXXXXXLGAVSRAAEGVDASTRLSDEKRM-GRRRAAR 762
T S+LG IAHV P F +I+ L+ ++ L + Q YKVVGS+EL+GDP+ L +++ D + +T + G +D G GA +LM+ LVG + K +++ + + E D P HV E G+ QGG + +S+ G+SGLV +PM+GAKD+GF GF G+ +G LG + + ++ V +T L D+K G RR AR
Sbjct: 2362 TAGSILGG-IAHVTPEFAIHPLIMADKFVYKDDLMYNIILWDCLVGNMLGQWYKVVGSLELMGDPVGLFNEITDGIALAARQTKRDFKGESDKKGQGAVILMQTLVGAPSDAIGKAANGFGDILKKATYSKNQEADHEP---------------RHVPE-GLLQGGVLLGKSLANGVSGLVTKPMQGAKDDGFKGFAKGVGQGTLGLVASPFIGTLGVIEKLSQSVHNTTHLMDDKDFDGTRRIAR 2590 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6863.14780.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6863.14780.1 >prot_H-paniculata_contig6863.14780.1 ID=prot_H-paniculata_contig6863.14780.1|Name=mRNA_H-paniculata_contig6863.14780.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=285bp MIVTHYCGGLRGLVSLVLAALTQQAVAQGYKVVGSMELLGDPLSLVSKLGback to top mRNA from alignment at H-paniculata_contig6863:518..4634+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6863.14780.1 ID=mRNA_H-paniculata_contig6863.14780.1|Name=mRNA_H-paniculata_contig6863.14780.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4117bp|location=Sequence derived from alignment at H-paniculata_contig6863:518..4634+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6863:518..4634+ >mRNA_H-paniculata_contig6863.14780.1 ID=mRNA_H-paniculata_contig6863.14780.1|Name=mRNA_H-paniculata_contig6863.14780.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1710bp|location=Sequence derived from alignment at H-paniculata_contig6863:518..4634+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |